Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTCTCGAGCCACGGGTAGAACCCCCACGATGGTAGTGCGATGTAGATCGGTTTAGAAGGGTAGCGTGAAGGTTTGATGAGTGTTTGATATTTCCTCCAACGTAGAACGAAGCCTACAACGGGGGAGTAAGGCTAAGGCCCAACCCCCGTCCCGGAAAAGCCCAGAGGGAAGACTGCAGTTCGCGTAAATCTTCAACTTCTTGAGGTTTTTGATTCTCCTAAGGGGCTGTGTCCGATAACGAAGCGCGTGCGGCTAACAACGTCTGTTCTGTGCGCCTCTCTGCAATTTCACTTCTTTCATTTCTTGGCTTTTTCTTAATTGAACATTCATGCCCATAATAATTATTTTTAAAAAAACGAAGATATTTGCTAGCGGATATTGTCCTATTTGGCCTTTTCTTTCGGCTTCCACTCAAGGTTTTAAAACGCTTCTGAGGGGAAGGTTTTCATACCCTTATAAATGGTGTTTTGTTCTCCGCCCCAACCAATGTGGGACATCATAATCCACCCCCTTCGGGGCCAGCATCCTCGCTGGGCTGGCACTCTTTCCTTCCTCCAATCGATGTGGGACCACCACCAAATCCACCCCCTTCGGGGCCCAGCGTCCTTACTGGTACACTGCCTCGTGTCTACCCCCTTCAGGGAACAGTGAGAAAGTTGGCGCATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACAGTCCAGATCTTACGGCTTAGAAAGCTGGGTAGGGTTTACGACGAGTTGTGAGCTACATTACATATGAGCTAAAAGGGTGAGCGTCATGCCTAATTGCTTATTGAACTTCGTGTGTAGGAACAAATTTTAGCCAATAACCGACTTAGGCTTTCGAAAGAGCACCAGTAGACGTGCATAGGTGGGTCTCCCTTTATATCTGGATTGTCGAACAAACATGGTTTACATCATCCTTAGGTTTCCAATTCTAGTAGTCATGTTTTCACTCATACTAGGTCTTGTCGCATTAGTAACTTTTCAGTGCTCTGGAGCTAGAAGAATGGGCTCTTGAGCTTTCTCGAGAGAATAACACGATGTTATGTCCTAAAATTGAATGACCTCTCATGGAGTCAAAGTACAAATATGGCCAAACCCTAAACCCTATAATTACATTCACGTGTACGATAGGATAATTTATGTCTAAGATTATAACCACTACATGCAAGCTGATTTTTTCCGAGATGTTCATAATTATAATTGCATCTTATTCATTTATGATCTAACCAATGATAAAACTAAGTCCCTCTCGAACCACGGGTAGAACCGGGGCTTTGGTGGGAACGATGGTAGTGCTATGTACATCGGTTTAGAAGGGTAGCGTGAAGGTTTGATGAGTGTTTGATATTTCCTCCAACGTAGAACGAAGCCTACAACGGGGGAGTAAGGCTAAGGCCCAACCTCCGTCCCGGAAAAGCCCAGAGGGAAGAGTGACGGTTCGCGTAAATCTTCAACTTCTTGAGGTTTTTGATTCTCCATTCTTGTTCCTCATGATTTCTGGAAAGCTTTATCCATCCGTCTCCACATCATGTATTTTCCCACCAAAACCGACCTCGACCTCGACCCCAGTTCATGTTCATCTTCCTCTTCTTAAAATCTCTTCCAAACTCAGATTAATTAGCTTCCAATCCGTCTCCCTCTCTTTTCCGACCTTCATTGCTTCTAAATCCAGTGTCAAGTCCACTAGATTTTCGAATTCGGTGGCAAAAGTTTATAGCTTCGAGGGCCAAAACCCCACTTCTTTGTCGGATTTGGAAGACTTGTCTGAGAATGGAGTTGTCTATAAGAAGACGCTGGCGATGGTGGAATGCTCCATGTTCGCTGCACTTAATGGTTTGGTCTACTTCTTGAGCAATTCACTTGCTCTTGAGGTTTGTATCTCTCAGTTTCTGCGAATTCTATTCTTTCCCCCTGTGCTGCTGTTTCTATGGTTTCCGTCTCCTGTTCTTCATACATAATGTTTGTCTGGTTATTTTTCTTCAATAAGACGGATACCCCAAGTCCATCCGTGTGGTGGTTGGTTCTTCTTTGATGTCAGTTTGAAATGTCTTTTTTCCATTGAAACAAGAAACTACTTTATCCACTTCAAATTTATCGCAATTGCCTAATCGTATGTGATTACTTAATACTTCTAATGTGATTTTTTTTGAAAGAAAAATTCAATATGATAGTTTTCTGAAACATGACATCATGGGGCTTGTTTAGGGTACTCTTAAATCTACCCCCAATAAATTGAAGAGAATTCCCATGATGAACAACAAGCTTGTAAATGGTCTTGGGTCTAGCAACAAACTGACTTTGACGATGAACAACAAAAGTAGTATCCGTGGGAAATTTGAAAATGTAACAGGTTCCCAATAAACTCTTGGTCTTTATATGATGATGAATGAGGATGTCTGATGTATATGCCATTTTGAAGTGATCTTTTGCTCTAGGAAACCAACTAAAGTAATCTCATATTTTGAAGTGCCCAAGAAACTTGTCTTCTAGTTTTCTTAACATGGATGCCAATTTTATGAAAGTTCTCATAATATAAACATGCTTCTTTCTCATAAATTTTCACTTGTTTAAAGAAATTATGTTTTTGATTAACTTAGATGAAGTGATCTCTTAGATTTCTCCATTCTTTTAGTAGCAGTTAAGTTTCTCGAATTTTAATTTCGTTCTGTTTTTACTTGATATTGGACAGAATTACTTCGGCTGTTTCTTCTGTCTACCGATAGTAATCTCTTCGATGAGATGGGGCATAGCAGCAGGGAGAAAAACCATGGTCTGTAGCTTTCAAGGACTCGGTTGTTCGACAATTGATTTTATGTTGTCTTGTTATTCGTACATTCTATCGTTGTAGTAATGTATATATCTAAGTTGTCGCATCTGATCTTCTTTCAAGACAGGTGGCAACATTCTTGCTGTTGCTGGTTTTGTCTGGTCCAGTGAAAGCTTTAACATTTCTGGTGAGCATGCTTTCAATTGCCTGTGGATTTATTTTCATGTTTCAGAAATAATAATATCATATAAAAGAGGTTGCCTTTTAACCTATCAACCTTGTAAATTCTATCTTATGTAGAACAAGAAGAGAAAAAAATCAGGTCAAGGGCCTTCTTATACCAGCTTTTCTTGAGCTTCTCTCCCCTATGATTAAATAAGTGGTAATAAAAACTATACAAAATACATGTTAAAGTACAAAAATAATCACCTTAATCAATTGGAACGTTCGAAAATAACAATCCTAAAGGCATTTTGTTCGATGATTTTTTGAAGTTAATATTATGGAGTATTGCAAATTATGATTTGAATCGTAGAATTGTTGATATTGTCTCTGCAAATACAAGTTTAAATAAAATCAACTATACATACCTTTTTAACATTGCTGCATTCCTAGTGGCATAGATAGGCTAAGTGTTAATAGATCATTAGACAAAATCTGATACATGATAGATTTTGTGGCTTCAGCTTGTAGTGCCTTATCTAGATTTTTTATGTAATTGGGGCTGCTACCATTTGCTCCAGAGTGTTTTTGTAACTTTTTCGGCTTAATGTTTTTCCTTTTTGCGTATTTCCATATATCAGGGAAACAGTATTTAATAGTTTACCTTCTTCACCTGAATGGCTGACGTTGTTGTATGCTTCCTTGTGCAGCTTAGGCATGGTTTAGTGGGGTTGACAATGGGCTCCTTGTGGAGGTAGGTGATTGACTACGCATATGACGATCCATAAATACATAATTAACCTCAATTTAGGCATAGGCCATTAAGGATTCATAAAGTTTGTGAAATCTCAGCATGCTAGTTGGTCGAGTTTCTTTTGTTAGTTTGGCGATGATGCACTGACCAAAGGCATTAATGGGGAGACATTTACTTCACTTCTGCGCTTTGAATTTATCCTAATAAGAACAGAAAAATAGTAAAAATGACTGCTTTCCTGTTTTGTATCTTCTCAGGCTTGGAGCAAATTGGAGTACCTCAATCTTTCTGTGCACAATCGTATTGTTTCCTCACTTTTCAAACGCCCATCTGAACAAATGATGTCTGCTAGTTTTTTTTTAATCCATGCTACTAACCAAGTACATGACTGTGCGTTTAGGTTCGGGCACTCGGGGCAGTGGGTTATGTCTTAATATCTTCATTCTTGATAAGAGAGAACATACTAGCTCTGGTAACAAGCTATTCTGAATCTCTGCTGCTATACTTCAAAGAAATCACCTCTCAAGTCTCGAAATACCTTTCGTGTTCATGCAGATCACTATAAATATTCACGCTTCGCTCACCCTTATCTTCACTGCCTCGGGTGTAAACTTGATTCCATCGATGAATGCAATATACGCTATTTTTGGGACACTGGTATGTTTTGTATTCTTCAATGAAACTGGTGCAATGTAGATTGTACTTGTATGACATGCATTGTAGAGATTTCATTAAACTTTGATTGATTTCTCCTCTCTGTGTTCTGAAAGGTAATGCTGAACTGTGGATGCTTCATGTTTTTGCTTCATCTTTTGTACTCCATATTCCTTACTAGACTTGGCCTGAAGACTTCATTGACATTGCCAAGGTGGCTGGAGAAGGCAATGTAAACATTCGACAGGTATTAAATCGTTCACGATGATAAATACGCCATTTATTTTTTCCTTTTCTGAAGGGAGGAAGAAATTGGTTAGGGTCACTGGTACGTTTACACCTGATATTTTCGCACGCATTGGCGAGCAGATACAGATTGTTTTTTGATATGTTATCATGTTCTAGGTTCAATAAATATGCTTGTCTGAATGTGGAAAATGCTTGGATTTGCAAAGAATGTATGTCATTGATTTTGTCCAATTGGATAAAATGGAAGGAAGTAACTGTTAGGTTAGGGAGATTCGAATTTCTGCTACTGCCCATCTGGACCATCTGGAGCAAGCTTGTATTAATAGAGCTTTGTGGACTGGAATATAGGATTTAGGGC
mRNA sequence
CCTCTCGAGCCACGGGTAGAACCCCCACGATGGTAGTGCGATGTAGATCGGTTTAGAAGGGTAGCGTGAAGGTTTGATGAGTGTTTGATATTTCCTCCAACGTAGAACGAAGCCTACAACGGGGGAGTAAGGCTAAGGCCCAACCCCCGTCCCGGAAAAGCCCAGAGGGAAGACTGCAGTTCGCGTAAATCTTCAACTTCTTGAGGTTTTTGATTCTCCATTCTTGTTCCTCATGATTTCTGGAAAGCTTTATCCATCCGTCTCCACATCATGTATTTTCCCACCAAAACCGACCTCGACCTCGACCCCAGTTCATGTTCATCTTCCTCTTCTTAAAATCTCTTCCAAACTCAGATTAATTAGCTTCCAATCCGTCTCCCTCTCTTTTCCGACCTTCATTGCTTCTAAATCCAGTGTCAAGTCCACTAGATTTTCGAATTCGGTGGCAAAAGTTTATAGCTTCGAGGGCCAAAACCCCACTTCTTTGTCGGATTTGGAAGACTTGTCTGAGAATGGAGTTGTCTATAAGAAGACGCTGGCGATGGTGGAATGCTCCATGTTCGCTGCACTTAATGGTTTGGTCTACTTCTTGAGCAATTCACTTGCTCTTGAGAATTACTTCGGCTGTTTCTTCTGTCTACCGATAGTAATCTCTTCGATGAGATGGGGCATAGCAGCAGGGAGAAAAACCATGGTGGCAACATTCTTGCTGTTGCTGGTTTTGTCTGGTCCAGTGAAAGCTTTAACATTTCTGCTTAGGCATGGTTTAGTGGGGTTGACAATGGGCTCCTTGTGGAGGCTTGGAGCAAATTGGAGTACCTCAATCTTTCTGTGCACAATCGTTCGGGCACTCGGGGCAGTGGGTTATGTCTTAATATCTTCATTCTTGATAAGAGAGAACATACTAGCTCTGATCACTATAAATATTCACGCTTCGCTCACCCTTATCTTCACTGCCTCGGGTGTAAACTTGATTCCATCGATGAATGCAATATACGCTATTTTTGGGACACTGGTAATGCTGAACTGTGGATGCTTCATGTTTTTGCTTCATCTTTTGTACTCCATATTCCTTACTAGACTTGGCCTGAAGACTTCATTGACATTGCCAAGGTGGCTGGAGAAGGCAATGTAAACATTCGACAGGTTCAATAAATATGCTTGTCTGAATGTGGAAAATGCTTGGATTTGCAAAGAATGTATGTCATTGATTTTGTCCAATTGGATAAAATGGAAGGAAGTAACTGTTAGGTTAGGGAGATTCGAATTTCTGCTACTGCCCATCTGGACCATCTGGAGCAAGCTTGTATTAATAGAGCTTTGTGGACTGGAATATAGGATTTAGGGC
Coding sequence (CDS)
ATGATTTCTGGAAAGCTTTATCCATCCGTCTCCACATCATGTATTTTCCCACCAAAACCGACCTCGACCTCGACCCCAGTTCATGTTCATCTTCCTCTTCTTAAAATCTCTTCCAAACTCAGATTAATTAGCTTCCAATCCGTCTCCCTCTCTTTTCCGACCTTCATTGCTTCTAAATCCAGTGTCAAGTCCACTAGATTTTCGAATTCGGTGGCAAAAGTTTATAGCTTCGAGGGCCAAAACCCCACTTCTTTGTCGGATTTGGAAGACTTGTCTGAGAATGGAGTTGTCTATAAGAAGACGCTGGCGATGGTGGAATGCTCCATGTTCGCTGCACTTAATGGTTTGGTCTACTTCTTGAGCAATTCACTTGCTCTTGAGAATTACTTCGGCTGTTTCTTCTGTCTACCGATAGTAATCTCTTCGATGAGATGGGGCATAGCAGCAGGGAGAAAAACCATGGTGGCAACATTCTTGCTGTTGCTGGTTTTGTCTGGTCCAGTGAAAGCTTTAACATTTCTGCTTAGGCATGGTTTAGTGGGGTTGACAATGGGCTCCTTGTGGAGGCTTGGAGCAAATTGGAGTACCTCAATCTTTCTGTGCACAATCGTTCGGGCACTCGGGGCAGTGGGTTATGTCTTAATATCTTCATTCTTGATAAGAGAGAACATACTAGCTCTGATCACTATAAATATTCACGCTTCGCTCACCCTTATCTTCACTGCCTCGGGTGTAAACTTGATTCCATCGATGAATGCAATATACGCTATTTTTGGGACACTGGTAATGCTGAACTGTGGATGCTTCATGTTTTTGCTTCATCTTTTGTACTCCATATTCCTTACTAGACTTGGCCTGAAGACTTCATTGACATTGCCAAGGTGGCTGGAGAAGGCAATGTAA
Protein sequence
MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM
Homology
BLAST of Cp4.1LG13g00330 vs. NCBI nr
Match:
XP_023549519.1 (uncharacterized protein LOC111807999 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 562 bits (1448), Expect = 2.67e-201
Identity = 300/300 (100.00%), Postives = 300/300 (100.00%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS
Sbjct: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
Query: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL
Sbjct: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
Query: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV
Sbjct: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
Query: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF
Sbjct: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
Query: 241 TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 300
TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM
Sbjct: 241 TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 300
BLAST of Cp4.1LG13g00330 vs. NCBI nr
Match:
KAG6579706.1 (hypothetical protein SDJN03_24154, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 550 bits (1417), Expect = 1.42e-196
Identity = 295/300 (98.33%), Postives = 295/300 (98.33%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
MISG LYPSVSTSCIFPPKPTSTST HVHLPLLKISSKLRLISFQSVSLSFPTFIASKS
Sbjct: 1 MISGNLYPSVSTSCIFPPKPTSTSTTAHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
Query: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
SVKSTR NSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL
Sbjct: 61 SVKSTRCLNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
Query: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV
Sbjct: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
Query: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF
Sbjct: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
Query: 241 TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 300
TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM
Sbjct: 241 TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 300
BLAST of Cp4.1LG13g00330 vs. NCBI nr
Match:
XP_022929150.1 (uncharacterized protein LOC111435817 [Cucurbita moschata])
HSP 1 Score: 549 bits (1415), Expect = 3.08e-196
Identity = 296/302 (98.01%), Postives = 297/302 (98.34%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPL--LKISSKLRLISFQSVSLSFPTFIAS 60
MISG LYPSVSTSCIFPPKPTSTST HVHLPL LKISSKLRLISF+SVSLSFPTFIAS
Sbjct: 1 MISGNLYPSVSTSCIFPPKPTSTSTTAHVHLPLPLLKISSKLRLISFESVSLSFPTFIAS 60
Query: 61 KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY 120
KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY
Sbjct: 61 KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY 120
Query: 121 FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG 180
FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG
Sbjct: 121 FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG 180
Query: 181 LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL 240
LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL
Sbjct: 181 LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL 240
Query: 241 IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK 300
IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK
Sbjct: 241 IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK 300
BLAST of Cp4.1LG13g00330 vs. NCBI nr
Match:
XP_022969819.1 (uncharacterized protein LOC111468904 [Cucurbita maxima] >XP_022969820.1 uncharacterized protein LOC111468904 [Cucurbita maxima])
HSP 1 Score: 543 bits (1399), Expect = 7.28e-194
Identity = 292/300 (97.33%), Postives = 295/300 (98.33%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
MISG LYPSVSTSCIFPPK TSTP HVHLPLLKIS+KLRLISF+SVSLSFPTFIASKS
Sbjct: 1 MISGNLYPSVSTSCIFPPK--RTSTPAHVHLPLLKISAKLRLISFESVSLSFPTFIASKS 60
Query: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL
Sbjct: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
Query: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV
Sbjct: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
Query: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF
Sbjct: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
Query: 241 TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 300
TASGVNLIPSM+AIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM
Sbjct: 241 TASGVNLIPSMSAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 298
BLAST of Cp4.1LG13g00330 vs. NCBI nr
Match:
KAG7017148.1 (hypothetical protein SDJN02_22260 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 512 bits (1319), Expect = 1.75e-181
Identity = 284/310 (91.61%), Postives = 287/310 (92.58%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
MISG LYPSVSTSCIFPPKPTSTST HVHLPLLKISSKLRLISF+SVSLSFPTFIASKS
Sbjct: 1 MISGNLYPSVSTSCIFPPKPTSTSTTAHVHLPLLKISSKLRLISFESVSLSFPTFIASKS 60
Query: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
SVKSTR NSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL
Sbjct: 61 SVKSTRCLNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
Query: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV
Sbjct: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
Query: 181 GLTMGSLW-----RLGANWSTSIFLCT-----IVRALGAVGYVLISSFLIRENILALITI 240
GLTMGSLW R+ WS +L IVRALGAVGYVLISSFLIRENILALITI
Sbjct: 181 GLTMGSLWSMLVGRVSFAWSKLEYLNLSVHNRIVRALGAVGYVLISSFLIRENILALITI 240
Query: 241 NIHASLTLIFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSL 300
NIHASLTLIFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSL
Sbjct: 241 NIHASLTLIFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSL 300
BLAST of Cp4.1LG13g00330 vs. ExPASy TrEMBL
Match:
A0A6J1ETG3 (uncharacterized protein LOC111435817 OS=Cucurbita moschata OX=3662 GN=LOC111435817 PE=4 SV=1)
HSP 1 Score: 549 bits (1415), Expect = 1.49e-196
Identity = 296/302 (98.01%), Postives = 297/302 (98.34%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPL--LKISSKLRLISFQSVSLSFPTFIAS 60
MISG LYPSVSTSCIFPPKPTSTST HVHLPL LKISSKLRLISF+SVSLSFPTFIAS
Sbjct: 1 MISGNLYPSVSTSCIFPPKPTSTSTTAHVHLPLPLLKISSKLRLISFESVSLSFPTFIAS 60
Query: 61 KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY 120
KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY
Sbjct: 61 KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY 120
Query: 121 FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG 180
FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG
Sbjct: 121 FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG 180
Query: 181 LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL 240
LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL
Sbjct: 181 LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL 240
Query: 241 IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK 300
IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK
Sbjct: 241 IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK 300
BLAST of Cp4.1LG13g00330 vs. ExPASy TrEMBL
Match:
A0A6J1I3S1 (uncharacterized protein LOC111468904 OS=Cucurbita maxima OX=3661 GN=LOC111468904 PE=4 SV=1)
HSP 1 Score: 543 bits (1399), Expect = 3.53e-194
Identity = 292/300 (97.33%), Postives = 295/300 (98.33%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIASKS 60
MISG LYPSVSTSCIFPPK TSTP HVHLPLLKIS+KLRLISF+SVSLSFPTFIASKS
Sbjct: 1 MISGNLYPSVSTSCIFPPK--RTSTPAHVHLPLLKISAKLRLISFESVSLSFPTFIASKS 60
Query: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL
Sbjct: 61 SVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYFL 120
Query: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV
Sbjct: 121 SNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGLV 180
Query: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF
Sbjct: 181 GLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLIF 240
Query: 241 TASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 300
TASGVNLIPSM+AIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM
Sbjct: 241 TASGVNLIPSMSAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKAM 298
BLAST of Cp4.1LG13g00330 vs. ExPASy TrEMBL
Match:
A0A1S4DWP5 (uncharacterized protein LOC103488678 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103488678 PE=4 SV=1)
HSP 1 Score: 496 bits (1278), Expect = 1.07e-175
Identity = 266/301 (88.37%), Postives = 280/301 (93.02%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPV-HVHLPLLKISSKLRLISFQSVSLSFPTFIASK 60
MISGKLY S S+SCIFPP PT T TP ++HL LKISS LRLISFQSVSLS P+ ASK
Sbjct: 1 MISGKLYSSSSSSCIFPPTPTPTPTPTGNLHLSFLKISSTLRLISFQSVSLSVPSSFASK 60
Query: 61 SSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYF 120
SS KSTRFSNS+ +VYS+EGQN +LSDL+DLSENGVVYKKTLAMVECSMFAALNGLVYF
Sbjct: 61 SSAKSTRFSNSLVEVYSYEGQNSITLSDLDDLSENGVVYKKTLAMVECSMFAALNGLVYF 120
Query: 121 LSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHGL 180
LSNSLALENYFGCFFCLPIVISSMRWGI+AGRKTMVATFLLLLVLSGPVKALT+LLRHGL
Sbjct: 121 LSNSLALENYFGCFFCLPIVISSMRWGISAGRKTMVATFLLLLVLSGPVKALTYLLRHGL 180
Query: 181 VGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTLI 240
VG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENIL+LITINIHASLTLI
Sbjct: 181 VGFTMGSLWRLGANWSTSIFLCTIVRAFGAVGYVLVSSFLIRENILSLITINIHASLTLI 240
Query: 241 FTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEKA 300
FTA GVNLIPSMNAIYAIFGTLV LNCGCFMFLLHLLYS+FLTRLGLKTSLTLPRWLEKA
Sbjct: 241 FTAWGVNLIPSMNAIYAIFGTLVFLNCGCFMFLLHLLYSVFLTRLGLKTSLTLPRWLEKA 300
BLAST of Cp4.1LG13g00330 vs. ExPASy TrEMBL
Match:
A0A1S4DVX7 (uncharacterized protein LOC103488678 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488678 PE=4 SV=1)
HSP 1 Score: 489 bits (1258), Expect = 1.65e-172
Identity = 266/310 (85.81%), Postives = 280/310 (90.32%), Query Frame = 0
Query: 1 MISGKLYPSVSTSCIFPPKPTSTSTPV-HVHLPLLKISSKLRLISFQSVSLSFPTFIASK 60
MISGKLY S S+SCIFPP PT T TP ++HL LKISS LRLISFQSVSLS P+ ASK
Sbjct: 1 MISGKLYSSSSSSCIFPPTPTPTPTPTGNLHLSFLKISSTLRLISFQSVSLSVPSSFASK 60
Query: 61 SSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVYF 120
SS KSTRFSNS+ +VYS+EGQN +LSDL+DLSENGVVYKKTLAMVECSMFAALNGLVYF
Sbjct: 61 SSAKSTRFSNSLVEVYSYEGQNSITLSDLDDLSENGVVYKKTLAMVECSMFAALNGLVYF 120
Query: 121 LSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMV---------ATFLLLLVLSGPVKA 180
LSNSLALENYFGCFFCLPIVISSMRWGI+AGRKTMV ATFLLLLVLSGPVKA
Sbjct: 121 LSNSLALENYFGCFFCLPIVISSMRWGISAGRKTMVCSFPGLKQVATFLLLLVLSGPVKA 180
Query: 181 LTFLLRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITI 240
LT+LLRHGLVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENIL+LITI
Sbjct: 181 LTYLLRHGLVGFTMGSLWRLGANWSTSIFLCTIVRAFGAVGYVLVSSFLIRENILSLITI 240
Query: 241 NIHASLTLIFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSL 300
NIHASLTLIFTA GVNLIPSMNAIYAIFGTLV LNCGCFMFLLHLLYS+FLTRLGLKTSL
Sbjct: 241 NIHASLTLIFTAWGVNLIPSMNAIYAIFGTLVFLNCGCFMFLLHLLYSVFLTRLGLKTSL 300
BLAST of Cp4.1LG13g00330 vs. ExPASy TrEMBL
Match:
A0A0A0K8H0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042440 PE=4 SV=1)
HSP 1 Score: 486 bits (1252), Expect = 9.77e-172
Identity = 265/302 (87.75%), Postives = 278/302 (92.05%), Query Frame = 0
Query: 1 MISGKLYPSVSTS--CIFPPKPTSTSTPVHVHLPLLKISSKLRLISFQSVSLSFPTFIAS 60
MISGKLY S S+S CIFPP PTST ++HL LKISS LRLISFQS SLSFP+ S
Sbjct: 1 MISGKLYSSYSSSSSCIFPPTPTSTPRG-NLHLSFLKISSTLRLISFQSPSLSFPSSFVS 60
Query: 61 KSSVKSTRFSNSVAKVYSFEGQNPTSLSDLEDLSENGVVYKKTLAMVECSMFAALNGLVY 120
KSS KSTRFS+S+ +VYS+EGQN +LSDL+DLSENGVVYKKTLAMVECSMFAALNGLVY
Sbjct: 61 KSSAKSTRFSSSLVQVYSYEGQNSITLSDLDDLSENGVVYKKTLAMVECSMFAALNGLVY 120
Query: 121 FLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATFLLLLVLSGPVKALTFLLRHG 180
FLSNSLALENYFGCFFCLPIVISSMRWGI+AGRKTMVATFLLLLVLSGPVKALT+LLRHG
Sbjct: 121 FLSNSLALENYFGCFFCLPIVISSMRWGISAGRKTMVATFLLLLVLSGPVKALTYLLRHG 180
Query: 181 LVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSFLIRENILALITINIHASLTL 240
LVG TMGSLWRLGANWSTSIFLCTIVRA GAVGYVL+SSFLIRENILALITINIHASLTL
Sbjct: 181 LVGFTMGSLWRLGANWSTSIFLCTIVRAFGAVGYVLVSSFLIRENILALITINIHASLTL 240
Query: 241 IFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK 300
IFTA GVNLIPSMNAIYAIFGTLV LNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK
Sbjct: 241 IFTAWGVNLIPSMNAIYAIFGTLVFLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPRWLEK 300
BLAST of Cp4.1LG13g00330 vs. TAIR 10
Match:
AT1G26180.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232, membrane (InterPro:IPR018710); Has 285 Blast hits to 285 proteins in 90 species: Archae - 0; Bacteria - 140; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). )
HSP 1 Score: 294.3 bits (752), Expect = 1.1e-79
Identity = 168/262 (64.12%), Postives = 206/262 (78.63%), Query Frame = 0
Query: 47 SVSLSFPTFIASKSSVKST----RFSN-SVAKVYS--FEGQNPTSLSDLEDLSE-NGVVY 106
SVSLS I S S+ + FS+ S A +Y+ +G+ S + E + VVY
Sbjct: 28 SVSLSPQRHIISLVSISNRGRCFAFSSVSGASLYNNQEDGKKEESERNYASTKEGDEVVY 87
Query: 107 KKTLAMVECSMFAALNGLVYFLSNSLALENYFGCFFCLPIVISSMRWGIAAGRKTMVATF 166
+KTL +VEC+MFAA+ GLVYFLSNSLA+ENYFGCFF LPIVISS+RW IA GRKTMVAT
Sbjct: 88 QKTLRLVECAMFAAVTGLVYFLSNSLAIENYFGCFFSLPIVISSIRWNIAGGRKTMVATV 147
Query: 167 LLLLVLSGPVKALTFLLRHGLVGLTMGSLWRLGANWSTSIFLCTIVRALGAVGYVLISSF 226
+LL +LSGPVKALT+ L HGLVGL +GSLW +GA+W SIFLCT+VRALG +GYVL SSF
Sbjct: 148 MLLFILSGPVKALTYFLTHGLVGLALGSLWSMGASWRLSIFLCTMVRALGLIGYVLTSSF 207
Query: 227 LIRENILALITINIHASLTLIFTASGVNLIPSMNAIYAIFGTLVMLNCGCFMFLLHLLYS 286
LIRENILA+ITINIHASL+ +FTA G+N++PSM+ IY IFGT+++LN G F+ LLHLLYS
Sbjct: 208 LIRENILAVITINIHASLSYVFTAMGLNIMPSMSLIYMIFGTVLLLNSGFFVLLLHLLYS 267
Query: 287 IFLTRLGLKTSLTLPRWLEKAM 301
IFLTRLG+K+SL LP WL+KA+
Sbjct: 268 IFLTRLGMKSSLRLPAWLDKAI 289
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023549519.1 | 2.67e-201 | 100.00 | uncharacterized protein LOC111807999 [Cucurbita pepo subsp. pepo] | [more] |
KAG6579706.1 | 1.42e-196 | 98.33 | hypothetical protein SDJN03_24154, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022929150.1 | 3.08e-196 | 98.01 | uncharacterized protein LOC111435817 [Cucurbita moschata] | [more] |
XP_022969819.1 | 7.28e-194 | 97.33 | uncharacterized protein LOC111468904 [Cucurbita maxima] >XP_022969820.1 uncharac... | [more] |
KAG7017148.1 | 1.75e-181 | 91.61 | hypothetical protein SDJN02_22260 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1ETG3 | 1.49e-196 | 98.01 | uncharacterized protein LOC111435817 OS=Cucurbita moschata OX=3662 GN=LOC1114358... | [more] |
A0A6J1I3S1 | 3.53e-194 | 97.33 | uncharacterized protein LOC111468904 OS=Cucurbita maxima OX=3661 GN=LOC111468904... | [more] |
A0A1S4DWP5 | 1.07e-175 | 88.37 | uncharacterized protein LOC103488678 isoform X6 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S4DVX7 | 1.65e-172 | 85.81 | uncharacterized protein LOC103488678 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A0A0K8H0 | 9.77e-172 | 87.75 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G042440 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G26180.1 | 1.1e-79 | 64.12 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2232... | [more] |