Cp4.1LG12g11880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g11880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	39S ribosomal protein L46, mitochondrial-like isoform X1
Location	Cp4.1LG12: 8377111 .. 8380747 (-)
RNA-Seq Expression	Cp4.1LG12g11880
Synteny	Cp4.1LG12g11880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACGTAAGCTTAAAAATTAATTTAACTATTAAATCATATTTTGATATTTTCTAAAAGCCAAAGATTAAAGGTACAATTTTGAAATCGAGAGAGAAAAATATATTTTACCAAAATGCCCCTCCCGAACGACATTTCCGAAAGGAGCCCAATGGTTAAACTCAGCCCAAAGCCTATAGTATACGCAACCTCCGGCGGCCCAGTTAGAAACAGAACAATAGGAGGAGATTCATCAAAGCGCAGCCCTCGCCGTCGACGGTCACTCTCCCATTCTCAGGTGAACACTTTGCCCTTTGTTAGTTTTCTGTGTGAAAAGCATTCCAATGGCAGCTTATGAATGGATGTACAATATTGGTTCAACCTGTTCTTAGAGCTTCGATGCAAGTTCTAGTATTATCTCTCTAAAAAAATTTCTTGTATGGTGTGTGAATTGTTACTTCTTTTTCTCTAATCGGTTGTGTGTGATTCTCTGAAGTTCAGAATGCAGAGATCGTTTAGTTTAGCCAGTCAGCTCGCTAAGAGGCGAGGTTTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCTGTCGTGATTCCGAAGATTGACCCCGTGGTGTATGCATTTCAGGAGTTCAAGTAGGTCTTTCGTCTTGTATTTCTTATTACGGTCTCTGTAAACTTAGAAATATTGAAAAATGGGGAGAAATGACGGAAACAGGTGCTGTATCTTGACTTGATTTCCCATCAGAATAGTGAATAACCAGGAATTGGAATTCGAACTACGTGGTTAATGTATTATAGCTATTATATGGTCGCAACTTAAATCAAGCAACATCGGTATGGTGTACTCTCTGTGAAAACAGTTTGTCTGATATATCTGCTCGATCGTGATCAGGTTTAGGTGGCAACAACAATATCGGCGCCGATATCCTGATGAACTTTTAGATAAAGCTAATGCCAGGTATGTGATCTATCATTTCGTCTGGCTGTGTCAAGTATAGGATTTTGGATTATGAATTGTTTCAACTGTTCTTTCCTTTTGAACTCTTCTAATTCTTCTTAGGTTTCCATTCCATTGAAATAAGTTTTAACTGATTCTGATGCTCTATATTCCTGAATAGTGTTTTCATGTAAATGCTGCAATAAAATTAGGTCCGCTAACTGGTTCAACCTGATTTGTGAAACTGAAGTATTAACTCTAAGTACTTTTGGAACGGAGTCAAAAGCATCTAAAGAAAGTTACCAGTTATTGGTAATGTTAAACTTTATGACTTCACTGGAGCCTGCTATGTTGAAGCTTTTTGCTGGCAAATATTAGCGTTTCCTTTAGTAGTGAGTCGAGTTTCTTTGACAAGAGAAAAACATATGCCATAGCTTTTAGGTAGTCAAGTTATTGTACATTTGAATCATTTGCTTGGACTATTTAGGTGGAAAAAGACCACCATTGTGTTTTCCTTATCTTCCTGAGTTATCTTAGTTCATTTGGTTGTAAACTGGATGACTGCGGTTACTGGAATCACCAATATATAACTATCGCTAGCGCAATTTCGTGTGCCCATAGCATAATATTTATTTTGACAAGGCAGCCTTAGCTCTTAGTGCCATCAATGTCATTTAGCTAATTTAATGGAGCTTATTGCGCAAAGACTGGATAAATTGCAAATATATGTTTTTTTCTTTCTTTCGGCAATTGTATGACTTGAGCTGCTCTGGTAACAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTATGCAGTCTTTCTTCATAATTTTGTTTAGAATTGGTTGATTGAAGGTTTCCTTAGCGATGCGACCATCACTATTTAGGAAAAACAGATATGCAATCTATGAGCTCTTGTTCTTGTTCATGCTGAATTATCTTCATTGTTTTGACTTACAAGGCTATCTTGTGTTTCTTCCTTTACTCTTCTAGATCATCAGTTTCCTCTTGCTTCTGTTAACTAACTACCATAAGTTGTGAGGTTATTCTTTTATAGTTGTGATTATGTAATGCTCTTGATTCATGTACAACACTTTTATATCCAAGTGTGGCTTCGGTGTCATGCATATCAAGAGCATCCTGCTACTGTTAGGTGCTTTCAACTCATTTACTTTAGTGCTCTTACATCTATAATACCACGGTTCTACTCGATTCATGATGACCAATGCACCTTGTTTTATTCCTGGGGAAACCTCTTTCATTTGATTCATAAGAAAATTTTCGGACATCATGGTATATCAAATAAATGCTAAATTATCATCACTTGGTTACTAGATCAGGCCATCGGCGTATTTCTTACTCTAGAACTGGAGTTTTAGATGGTGGCTATAAAATACAGCGTCTCTTTTTTTTCTCATTGTTGTTTTAGACAGTCTATCTGATCCAAGTCATTAATTTTCCAGATTCTAAGCTCAAAAGAGAGGTTTAAATTCTGCTTACTTGAATTGTCCCCTTTCCTTTTAGGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTCCTCTATGGTGCCTCTATTGGGGCACCTGATAAGAAGCCTGTCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAAGTAAGAATTGGCTGCCAACCCTCTTCAGTTCTCTATTTCAACAATTAAACCCTTCTAACTTTCAAGTTCTGCAGTGTGCAGAGTCTGCCTTAGAGTCCGTTCTTGGAGGTCTTTCTCATACATATTTTGTCGGCAATGCTCCAATGGCTCATATGGTTGTACCACCTACAGAAACTGCTCAAGTTCCATCTTTGAAGGTATTCTTCTATTCAAACTTTTACATCATATAAGAGATTAAAGGCTTCACGCTTTGACACTTAGAATCGATTAAATACCATGTGATCTCTGTACTCTAGATTATATTCTATTTTAGTCCTTGTACTTTAGATTGTCCAAATTTAGGCTTTATATTTAAGATTTATTGATTGTCCAATTGTCCAAGAACTAAATTTGGACACTTAAAATACATGAACTAAAATAGAATAAAACTCAAAGTAGTGAACCAAAATGATATTTACCTTTGGAGTCTAGGCTCGAACATAGTTTAGTACAATGAGGTCATTTACTCCTTTGGTTAAAGGCAATCTCTCCTATTTGCCAGCGATTCTTTTTCAAGTCTCAAGTGATCGCAACCAATAAATTCAACATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCTAGTAGACTGACCACATAAGCCTCACATAGACCGTTTTCAATCAACAAATTGATGGTCAGTGTGTAAGTGACTTAGAGGATTGAGTTATAAAATGTTAAATTAATGGTAAGGCCGGAGGCTTTGTTTGTTGCTCTGATGTAAAATGGCCGATGAGGATACCAATTTAGGATCCGCACTTTGGCAATTTCCTCTCAGCTGTTTCTTTGATTACTAGATAGTGTGGATTAATGGTTCAGACCCCTTATTTTGATTTCTCGAACCAACTAGAGTCATCTTTCATATCATCTTGAAATTTTGAATATATCAACTT

mRNA sequence

ATGCCACAGAGAAAAATATATTTTACCAAAATGCCCCTCCCGAACGACATTTCCGAAAGGAGCCCAATGGTTAAACTCAGCCCAAAGCCTATAGTATACGCAACCTCCGGCGGCCCAGTTAGAAACAGAACAATAGGAGGAGATTCATCAAAGCGCAGCCCTCGCCGTCGACGGTCACTCTCCCATTCTCAGTTCAGAATGCAGAGATCGTTTAGTTTAGCCAGTCAGCTCGCTAAGAGGCGAGGTTTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCTGTCGTGATTCCGAAGATTGACCCCGTGGTGTATGCATTTCAGGAGTTCAAGTTTAGGTGGCAACAACAATATCGGCGCCGATATCCTGATGAACTTTTAGATAAAGCTAATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTCCTCTATGGTGCCTCTATTGGGGCACCTGATAAGAAGCCTGTCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTAGAGTCCGTTCTTGGAGGTCTTTCTCATACATATTTTGTCGGCAATGCTCCAATGGCTCATATGGTTGTACCACCTACAGAAACTGCTCAAGTTCCATCTTTGAAGCGATTCTTTTTCAAGTCTCAAGTGATCGCAACCAATAAATTCAACATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGATGCTAGTAGACTGACCACATAAGCCTCACATAGACCGTTTTCAATCAACAAATTGATGGTCAGTGTGTAAGTGACTTAGAGGATTGAGTTATAAAATGTTAAATTAATGGTAAGGCCGGAGGCTTTGTTTGTTGCTCTGATGTAAAATGGCCGATGAGGATACCAATTTAGGATCCGCACTTTGGCAATTTCCTCTCAGCTGTTTCTTTGATTACTAGATAGTGTGGATTAATGGTTCAGACCCCTTATTTTGATTTCTCGAACCAACTAGAGTCATCTTTCATATCATCTTGAAATTTTGAATATATCAACTT

Coding sequence (CDS)

ATGCCACAGAGAAAAATATATTTTACCAAAATGCCCCTCCCGAACGACATTTCCGAAAGGAGCCCAATGGTTAAACTCAGCCCAAAGCCTATAGTATACGCAACCTCCGGCGGCCCAGTTAGAAACAGAACAATAGGAGGAGATTCATCAAAGCGCAGCCCTCGCCGTCGACGGTCACTCTCCCATTCTCAGTTCAGAATGCAGAGATCGTTTAGTTTAGCCAGTCAGCTCGCTAAGAGGCGAGGTTTTTCGACGAATTCCGAGAAAATTGTGGCGTCTGTACTGTTCGAGAGGCTGCCTGTCGTGATTCCGAAGATTGACCCCGTGGTGTATGCATTTCAGGAGTTCAAGTTTAGGTGGCAACAACAATATCGGCGCCGATATCCTGATGAACTTTTAGATAAAGCTAATGCCAGGGGAAAAGGTGACTACCAAATTGATTATGTTCCAGCTCCACGGATTACTGAAGCTGACAAAACAAATGATAGGAAGTCACTGCAGAGAGCACTTGACAGAAGACTCTATCTTCTCCTCTATGGTGCCTCTATTGGGGCACCTGATAAGAAGCCTGTCTGGCACTTTCCAGAAAAAGCTTACGAGACCGAGGAGACATTACGTAAATGTGCAGAGTCTGCCTTAGAGTCCGTTCTTGGAGGTCTTTCTCATACATATTTTGTCGGCAATGCTCCAATGGCTCATATGGTTGTACCACCTACAGAAACTGCTCAAGTTCCATCTTTGAAGCGATTCTTTTTCAAGTCTCAAGTGATCGCAACCAATAAATTCAACATTGGGAAATGTGAAGATTTTGTATGGGTTACAAAGGATGAATTGATGGAGTATTTTCCTGATCAAGCTGAATTTTTCAAGAAGATGATCATCAGTTGA

Protein sequence

MPQRKIYFTKMPLPNDISERSPMVKLSPKPIVYATSGGPVRNRTIGGDSSKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS

Homology

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy Swiss-Prot
Match: Q9EQI8 (39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14
Identity = 52/139 (37.41%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 146 IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETL 205
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   VW  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-VLLVREKLGDQD---VWMLPQVEWQPGETL 186

Query: 206 RKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKF 265
           R  AE  L ++        F+GNAP  H      +  Q  S   +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIQTESDLGVKVFFFKALLLTGDFV 246

Query: 266 NIGKCEDFVWVTKDELMEY 282
             GK    VW +K+EL +Y
Sbjct: 247 QAGKKSRHVWASKEELGDY 261

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy Swiss-Prot
Match: Q9H2W6 (39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.6e-14
Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 153 RITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETLRKCAESA 212
           RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQAEWQPGETLRGTAERT 195

Query: 213 LESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKFNIGKCED 272
           L ++        F+GNAP  H      +  +  S    K FFFK+ ++  +    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 273 FVWVTKDELMEY 282
            VWVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy Swiss-Prot
Match: Q5RBU2 (39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.6e-14
Identity = 52/132 (39.39%), Postives = 67/132 (50.76%), Query Frame = 0


Query: 153 RITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETLRKCAESA 212
           RITEAD+ NDR SL R LDR L +LL     G  D   VW  P+  ++  ETLR  AE  
Sbjct: 136 RITEADEKNDRTSLNRKLDRNL-VLLVREKFGDQD---VWILPQTEWQPGETLRGTAERT 195

Query: 213 LESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKFNIGKCED 272
           L ++        F+GNAP  H      +  +  S    K FFFK+ ++  +    G    
Sbjct: 196 LATLSENNMEAKFLGNAPCGHYTFKFPQAMRTESNLGAKVFFFKALLLTGDFSQAGNKGH 255

Query: 273 FVWVTKDELMEY 282
            VWVTKDEL +Y
Sbjct: 256 HVWVTKDELGDY 263

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy Swiss-Prot
Match: Q5RK00 (39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.0e-13
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = 0


Query: 146 IDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETEETL 205
           + + P  R TEADK NDR SL R LDR L +LL    +G  D   +W  P+  ++  ETL
Sbjct: 127 LQFRPGARETEADKKNDRTSLHRKLDRNL-ILLVREKLGDQD---LWMLPQVEWQPGETL 186

Query: 206 RKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS---LKRFFFKSQVIATNKF 265
           R  AE  L ++        F+GNAP  H      +  +  S   +K FFFK+ ++  +  
Sbjct: 187 RGTAERILATLSENNMEAKFLGNAPCGHYKFKFPKAIRTESDLGVKVFFFKALLLTGDFV 246

Query: 266 NIGKCEDFVWVTKDELMEY 282
             GK    VW +K+EL +Y
Sbjct: 247 QTGKKGRHVWASKEELGDY 261

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy Swiss-Prot
Match: P36528 (54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL17 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 6.7e-13
Identity = 55/159 (34.59%), Postives = 78/159 (49.06%), Query Frame = 0


Query: 139 RGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKA 198
           + K D     +P  RITEAD++ND KSL+R L R LYLL+        DK   W FP   
Sbjct: 131 QSKDDVNRPVIPNDRITEADRSNDMKSLERQLSRTLYLLV-------KDKSGTWKFPNFD 190

Query: 199 YETE-ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVI 258
              E + L   AE+ L+ + G   +T+ V   P+  +      TA+      F  KS ++
Sbjct: 191 LSDESKPLHVHAENELKLLSGDQIYTWSVSATPIGVLQDERNRTAE------FIVKSHIL 250

Query: 259 ATNKFNI-----GKCEDFVWVTKDELMEYFPDQAEFFKK 292
           A  KF++        EDF W+TK E+ EY P   ++F K
Sbjct: 251 A-GKFDLVASKNDAFEDFAWLTKGEISEYVP--KDYFNK 273

[Close]

BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: XP_022992541.1 (54S ribosomal protein L17, mitochondrial-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 541 bits (1394), Expect = 1.37e-193
Identity = 270/273 (98.90%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 23  MVKLSPKPIVYATSGGPVRNRTIGGDSSKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRG 82
           MVKLSPKPIVYATSGGPVRNRTIGGD SKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRG
Sbjct: 1   MVKLSPKPIVYATSGGPVRNRTIGGDLSKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRG 60

Query: 83  FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKANARGKG 142
           FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDE LDKANARGKG
Sbjct: 61  FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANARGKG 120

Query: 143 DYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETE 202
           DYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKP+WHFPEKAYETE
Sbjct: 121 DYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPIWHFPEKAYETE 180

Query: 203 ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKF 262
           ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKF
Sbjct: 181 ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKF 240

Query: 263 NIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           NIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 241 NIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 273

[Close]

BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: XP_023547488.1 (39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023547489.1 39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463 bits (1192), Expect = 1.67e-163
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 61  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 121 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: XP_023547487.1 (39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 463 bits (1192), Expect = 2.98e-163
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 17  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 77  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 137 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: XP_022954203.1 (39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata] >XP_022954204.1 39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 462 bits (1188), Expect = 6.78e-163
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 61  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 121 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Cp4.1LG12g11880 vs. NCBI nr
Match: XP_022992543.1 (39S ribosomal protein L46, mitochondrial-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 461 bits (1187), Expect = 9.64e-163
Identity = 227/229 (99.13%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKP+WHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 121 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy TrEMBL
Match: A0A6J1JTU9 (54S ribosomal protein L17, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 541 bits (1394), Expect = 6.63e-194
Identity = 270/273 (98.90%), Postives = 271/273 (99.27%), Query Frame = 0


Query: 23  MVKLSPKPIVYATSGGPVRNRTIGGDSSKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRG 82
           MVKLSPKPIVYATSGGPVRNRTIGGD SKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRG
Sbjct: 1   MVKLSPKPIVYATSGGPVRNRTIGGDLSKRSPRRRRSLSHSQFRMQRSFSLASQLAKRRG 60

Query: 83  FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKANARGKG 142
           FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDE LDKANARGKG
Sbjct: 61  FSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDEFLDKANARGKG 120

Query: 143 DYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPEKAYETE 202
           DYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKP+WHFPEKAYETE
Sbjct: 121 DYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPIWHFPEKAYETE 180

Query: 203 ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKF 262
           ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKF
Sbjct: 181 ETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQVIATNKF 240

Query: 263 NIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           NIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 241 NIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 273

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy TrEMBL
Match: A0A6J1GQF1 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456531 PE=4 SV=1)

HSP 1 Score: 462 bits (1188), Expect = 3.28e-163
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 61  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 121 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy TrEMBL
Match: A0A6J1JZI9 (39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 4.67e-163
Identity = 227/229 (99.13%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 1   MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 60

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 61  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 120

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKP+WHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 121 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 180

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 181 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 229

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy TrEMBL
Match: A0A6J1GQE8 (39S ribosomal protein L46, mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456531 PE=4 SV=1)

HSP 1 Score: 462 bits (1188), Expect = 5.88e-163
Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQL KRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 17  MQRSFSLASQLVKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 77  RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 137 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Cp4.1LG12g11880 vs. ExPASy TrEMBL
Match: A0A6J1JQ58 (39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488836 PE=4 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 8.35e-163
Identity = 227/229 (99.13%), Postives = 228/229 (99.56%), Query Frame = 0


Query: 67  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 126
           MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR
Sbjct: 17  MQRSFSLASQLAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRR 76

Query: 127 RYPDELLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 186
           RYPDE LDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP
Sbjct: 77  RYPDEFLDKANARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAP 136

Query: 187 DKKPVWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 246
           DKKP+WHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS
Sbjct: 137 DKKPIWHFPEKAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPS 196

Query: 247 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 295
           LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS
Sbjct: 197 LKRFFFKSQVIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 245

[Close]

BLAST of Cp4.1LG12g11880 vs. TAIR 10
Match: AT1G14620.1 (decoy )

HSP 1 Score: 337.4 bits (864), Expect = 1.1e-92
Identity = 161/220 (73.18%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 77  LAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKA 136
           L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDE LD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 137 NARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPE 196
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 197 KAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPT-ETAQVPSLKRFFFKSQ 256
           K Y++E TLRKCAESAL+SV+G L+HTYFVGNAPMAHM + PT E   +PS KRFFFK  
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTEEMPDLPSYKRFFFKCS 193

Query: 257 VIATNKFNIGKCEDFVWVTKDELMEYFPDQAEFFKKMIIS 296
           V+A +K++I  CEDFVWVTKDEL+E+FP+QAEFF KMIIS
Sbjct: 194 VVAASKYDISNCEDFVWVTKDELLEFFPEQAEFFNKMIIS 233

[Close]

BLAST of Cp4.1LG12g11880 vs. TAIR 10
Match: AT1G14620.2 (decoy )

HSP 1 Score: 262.7 bits (670), Expect = 3.6e-70
Identity = 128/188 (68.09%), Postives = 149/188 (79.26%), Query Frame = 0


Query: 77  LAKRRGFSTNSEKIVASVLFERLPVVIPKIDPVVYAFQEFKFRWQQQYRRRYPDELLDKA 136
           L  RRGF T+S+KIVASVLFERL VVIPK DP VYAFQEFKF WQQQ+RRRYPDE LD A
Sbjct: 14  LESRRGFCTSSDKIVASVLFERLRVVIPKPDPAVYAFQEFKFNWQQQFRRRYPDEFLDIA 73

Query: 137 NARGKGDYQIDYVPAPRITEADKTNDRKSLQRALDRRLYLLLYGASIGAPDKKPVWHFPE 196
             R KG+YQ+DYVPAPRITEADK NDRKSL RALD++LYLL++G   GA   KPVWHFPE
Sbjct: 74  KNRAKGEYQMDYVPAPRITEADKNNDRKSLYRALDKKLYLLIFGKPFGATSDKPVWHFPE 133

Query: 197 KAYETEETLRKCAESALESVLGGLSHTYFVGNAPMAHMVVPPTETAQVPSLKRFFFKSQV 256
           K Y++E TLRKCAESAL+SV+G L+HTYFVGNAPMAHM + PTE  ++P L  +    Q+
Sbjct: 134 KVYDSEPTLRKCAESALKSVVGDLTHTYFVGNAPMAHMAIQPTE--EMPDLPSYKVLLQM 193

Query: 257 IATNKFNI 265
             ++   I
Sbjct: 194 QCSSSIEI 199

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g11880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9EQI8	1.2e-14	37.41	39S ribosomal protein L46, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl46 PE=1...	[more]
Q9H2W6	4.6e-14	39.39	39S ribosomal protein L46, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL46 PE=1 ...	[more]
Q5RBU2	4.6e-14	39.39	39S ribosomal protein L46, mitochondrial OS=Pongo abelii OX=9601 GN=MRPL46 PE=2 ...	[more]
Q5RK00	1.0e-13	35.97	39S ribosomal protein L46, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl46...	[more]
P36528	6.7e-13	34.59	54S ribosomal protein L17, mitochondrial OS=Saccharomyces cerevisiae (strain ATC...	[more]

BLAST of Cp4.1LG12g11880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992541.1	1.37e-193	98.90	54S ribosomal protein L17, mitochondrial-like isoform X1 [Cucurbita maxima]	[more]
XP_023547488.1	1.67e-163	100.00	39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita pepo subsp. ...	[more]
XP_023547487.1	2.98e-163	100.00	39S ribosomal protein L46, mitochondrial-like isoform X1 [Cucurbita pepo subsp. ...	[more]
XP_022954203.1	6.78e-163	99.56	39S ribosomal protein L46, mitochondrial-like isoform X2 [Cucurbita moschata] >X...	[more]
XP_022992543.1	9.64e-163	99.13	39S ribosomal protein L46, mitochondrial-like isoform X3 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG12g11880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JTU9	6.63e-194	98.90	54S ribosomal protein L17, mitochondrial-like isoform X1 OS=Cucurbita maxima OX=...	[more]
A0A6J1GQF1	3.28e-163	99.56	39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1JZI9	4.67e-163	99.13	39S ribosomal protein L46, mitochondrial-like isoform X3 OS=Cucurbita maxima OX=...	[more]
A0A6J1GQE8	5.88e-163	99.56	39S ribosomal protein L46, mitochondrial-like isoform X1 OS=Cucurbita moschata O...	[more]
A0A6J1JQ58	8.35e-163	99.13	39S ribosomal protein L46, mitochondrial-like isoform X2 OS=Cucurbita maxima OX=...	[more]

BLAST of Cp4.1LG12g11880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14620.1	1.1e-92	73.18	decoy	[more]
AT1G14620.2	3.6e-70	68.09	decoy	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 162..295 e-value: 6.0E-31 score: 108.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..66
None	No IPR available	PANTHER	PTHR13124:SF14	SUBFAMILY NOT NAMED	coord: 67..295
IPR040008	39S ribosomal protein L46, mitochondrial	PANTHER	PTHR13124	39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED	coord: 67..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g11880.1	Cp4.1LG12g11880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome