Cp4.1LG12g10780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g10780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ras-related protein RABA5b-like
Location	Cp4.1LG12: 9167318 .. 9169887 (+)
RNA-Seq Expression	Cp4.1LG12g10780
Synteny	Cp4.1LG12g10780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACGGTGGTGGAGCGTCCTTCAAGATGAGCTGCAGTGTTATAGTTTCTCAGTGCCTTGAATTGCGCACACATTGATTTCGATTTCATCAAACACAGAATCAAAGGTGGTTGGGTCCCAATTCAAGCACCGAAATCTTGAAATTCATGAATTCCCCGATAATCATGGCGTCTTTCTGTACTTCCTGTCATGAGTTTGGAGTTATAGCATTACCATCACCCGTTTTGCACAGTACAAAAACCTCAACTCTAAGTTTTTCCTTCTTCATCTTCATCTATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATTGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCGACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGGTACGTTCTCTTCGAATCTGCATGGTTGCTTTACTCTTCTGTTTGTTTGCAGAAGCAATTTATGGAACTGAATCGAATTTCTTTCTTCGGTTCATTAGAATCTGCTGTTGGTTTGGTTTATTGATTCTTTGATTTGCAAGGAACTGTAAGAAACATGGCAATGATAGAAAATCCACTGTTCTTGGTTATTCTACTGCTTCTTGTAGGAAAGCTGGATTAGATTAGATCAAAAGGATGAACGAGTTGCTTTTGATCTTACTTACTGGACTTACTTCAGTGAGTAATTTGTTATAAACTAAAGAATTGACTAGTGGTGAGGCTTCCCAAATTCATACCAAAAAACAACAGTTTAGCCCTGTGTAATGTTTGAAAACAGATTCAAAAAGAAAAGGCAAGGACCTTGTTTCTTAGCTCATAAGTCACTTCTAGTCAATTTTAGGACAAACTTCCTTGTTCTTCGGGCATTTGGTGATAATGAAATTTGAATTTCAGTTTATGGCATGTGAAGTTATTAAAGAATAGCTGCTTAGTTTTTATAGGTCTATCATTGGAAGTGACATGGTGTTAGTAACTGTTGAATCAATGACCCAAGAACTTTTTCTTCAAATTTTGAATGGTATGCTTTTTGGGCTCTCAACAATATCTGTTAGCGGTGGGCTTGGACAATTACAGATGGTATTAGAGCCAGGCATCGGGCGATGTGCTAGTGAGAAGACTGAGCCCCGAAGGGGGTGAACACGAGGCAATGTGCCAGCAAGGACGTTTGCCTCGAAGATGATGGATTGGAGGGTCCCACATCGATTGGAAAAGAGAACAAGTGCCAGCGAGGACGCTGGGCCCTGAAGGGGGTGGATTGTAAGATCCACATCGGTTGGGGAGGAGAACGAAACATTGTTTATAAGGGTGTGAAAACTTCTTGTTTAAAAACTTTGAGGGAAAACTCAAAGAGGACAATATTTGCTAGCGTTGGACTCTTATTCTTAGTTGAACAGGAAGAATTGACGAATGATATACTTTTTGAGTCTCTTCATATCTTCACGTCGATATAATATTGTCCGCTTGCATGGTTTGCCTCATGTTCCTAACACCCAATATAGTTGTTTCTCTTTACTTTGTATGGGCTACATTTACTTAGATATCTAGATAGGTAATTAAAGCAAGCAAATCTCATACATAATCTCATACTTCATTGTCATTTGCAATTTATAAGATTATGAACTGAAGAAGCTTCCTCTCCTGCTACCGTTTGCAGTGCATTGTGATACGGCGACGATAAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAAAACAGCCTTTGAGCTTATTGTTAGGGAGATTTACAACAATGTCACCAGGAAAGCCCTCAACTCTGACTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGAGGTTCATGTTCTCCCTCCCAAATTTTTAGCTCTGAGGATTGTATTCGATAAGTCTAACAGGTCTCTAAAATTTAGGTTTCGAACCAATTCATTCTCAAACTTTCAATAGTTTCGTGTCTGAGAAAGTTCGAGAGTTTACTAGAAATCCTAAAGGGACTGGGAGAGTACCATTGTTTTGTATTGTTCTTATCAATGTCCTCATGTGTCTCTTCAAGATTATCCATTCTAGAACGGTTTAGATGAATTATTCCAAAAATAGAAATTAAAAGATAAATAAGTAATTGCAAATATTATGATTTGAAAACTTAAATACCTGAAATTTTGCCACGCAAATGCTTATATAGTTGGAATATCCATAAAAATTAATTAAATTAATCGGTGATTTATAAATTTT

mRNA sequence

TGGACGGTGGTGGAGCGTCCTTCAAGATGAGCTGCAGTGTTATAGTTTCTCAGTGCCTTGAATTGCGCACACATTGATTTCGATTTCATCAAACACAGAATCAAAGGTGGTTGGGTCCCAATTCAAGCACCGAAATCTTGAAATTCATGAATTCCCCGATAATCATGGCGTCTTTCTGTACTTCCTGTCATGAGTTTGGAGTTATAGCATTACCATCACCCGTTTTGCACAGTACAAAAACCTCAACTCTAAGTTTTTCCTTCTTCATCTTCATCTATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATTGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCGACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGTGCATTGTGATACGGCGACGATAAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAAAACAGCCTTTGAGCTTATTGTTAGGGAGATTTACAACAATGTCACCAGGAAAGCCCTCAACTCTGACTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGAGGTTCATGTTCTCCCTCCCAAATTTTTAGCTCTGAGGATTGTATTCGATAAGTCTAACAGGTCTCTAAAATTTAGGTTTCGAACCAATTCATTCTCAAACTTTCAATAGTTTCGTGTCTGAGAAAGTTCGAGAGTTTACTAGAAATCCTAAAGGGACTGGGAGAGTACCATTGTTTTGTATTGTTCTTATCAATGTCCTCATGTGTCTCTTCAAGATTATCCATTCTAGAACGGTTTAGATGAATTATTCCAAAAATAGAAATTAAAAGATAAATAAGTAATTGCAAATATTATGATTTGAAAACTTAAATACCTGAAATTTTGCCACGCAAATGCTTATATAGTTGGAATATCCATAAAAATTAATTAAATTAATCGGTGATTTATAAATTTT

Coding sequence (CDS)

ATGGCGGCCGACGACGACCAGGGCGGCGAGGACTACTTGTTTAAGATTGTTCTGATTGGCGACTCTGCGGTGGGGAAATCGAACCTCCTCTCGCGGTTCGCTCGGAATGAGTTCGATAACAATTCCAAGGCCACGATCGGCGTCGAGTTTCAGACGCAAGTGGTGGAAATTGACGGCAAGGAGATCAAGGCTCAGATCTGGGACACCGCCGGCCAGGAGCGCTTTAGAGCTGTCACTTCAGCTTACTATCGCGGCGCCGTTGGCGCCCTTATTGTCTACGATATTAGCCGCCGGAGTAGCTTCGACAGCGTCAAGCGGTGGCTCGACGAGCTCGGCGTGCATTGTGATACGGCGACGATAAGGATGTTGGTAGGGAACAAGTGTGATTTGGAGAACATCAGAGATGTGCATGTTGGGGAAGGCAAGTATCTAGCAGAAGAGGAAGGACTGTTCTTCATGGAAACCTCTGCTCTTGATTCCACCAATGTCAAAACAGCCTTTGAGCTTATTGTTAGGGAGATTTACAACAATGTCACCAGGAAAGCCCTCAACTCTGACTCTCACAAGGCCGAGCTTTCTGTAAATCGAGTAAGTTTGGCCGATGCGGGAGCCTCGTCCAAAAAAGGCTTCTCGTGTTGCTCTCAATGA

Protein sequence

MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ

Homology

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy Swiss-Prot
Match: P19892 (Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.6e-88
Identity = 165/215 (76.74%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+G E+YLFKIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR++F+SV RWLDEL +H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLENIR V V EGK LAEEEGLFF+ETSALDSTNVKTAFE+++ +IYNNV+RK 
Sbjct: 122 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 181

Query: 183 LNSDSHKAELSVNRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K EL+VNRVSL  D  ++SK+  GFSCCS
Sbjct: 182 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 216

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy Swiss-Prot
Match: Q9SRS5 (Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.3e-87
Identity = 166/218 (76.15%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           M  +DD+ GE+YLFKIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GK
Sbjct: 1   MGKEDDR-GEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  +F+SVKRWL EL  HCDTA  
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           +MLVGNKCDLE+IR V V EGK LAEEEGLFFMETSALD+TNV  AFE+++REI+NNV+R
Sbjct: 121 QMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLA---DAGASSKKGFSCCSQ 216
           K LNSD++KAELSVNRVSL    D   SS +  SCCS+
Sbjct: 181 KLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy Swiss-Prot
Match: P28187 (Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 5.1e-87
Identity = 159/213 (74.65%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           +DDD+ GE+YLFKIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKE+
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R S+F++V RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           L+GNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++REIY+N++RK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           LNSDS+K EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy Swiss-Prot
Match: Q9SIP0 (Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 2.5e-86
Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+GGE+YLFKIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRS+F+SV RWLDEL  H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++R+IY N++RK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSHKAELSV-NRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K ELS+ NRVSL  D   SS +  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy Swiss-Prot
Match: Q9FGK5 (Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 8.2e-69
Identity = 140/216 (64.81%), Postives = 167/216 (77.31%), Query Frame = 0


Query: 5   DDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKA 64
           +D   EDYLFKIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKEIKA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRMLV 124
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR +F S+ RWL+EL  H D   + +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKALN 184
           GNK DL+++R+V   EGK LAE +GLFFMETSALDS+NV  AFE +V+EIYN ++RK ++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SD----SHKAELSVNR--VSLADAGASSKKGFSCCS 215
           S        A LS  +  V  +D     KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: XP_022953267.1 (ras-related protein RABA5b-like [Cucurbita moschata])

HSP 1 Score: 416 bits (1068), Expect = 3.25e-146
Identity = 211/215 (98.14%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAAD+DQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADEDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFEL+VREIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: KAG7014536.1 (Ras-related protein RABA5e [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415 bits (1067), Expect = 4.61e-146
Identity = 211/215 (98.14%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSF+SVKRWLDELGVHCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFEL+VREIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: KAG6576014.1 (Ras-related protein RABA5e, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414 bits (1064), Expect = 1.32e-145
Identity = 210/215 (97.67%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSF+SVKRWLDELGVHCDTAT+
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFNSVKRWLDELGVHCDTATM 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFEL+VREIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: XP_022991984.1 (ras-related protein RABA5e-like [Cucurbita maxima])

HSP 1 Score: 413 bits (1062), Expect = 2.67e-145
Identity = 210/215 (97.67%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+SFDSVKRWLDELG HCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTSFDSVKRWLDELGGHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFEL+VREIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. NCBI nr
Match: XP_023549172.1 (ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409 bits (1051), Expect = 1.27e-143
Identity = 207/215 (96.28%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFEL+++EIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELVIKEIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           K LNSDS+KAELSVNRVSLAD  ASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSVNRVSLADGAASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy TrEMBL
Match: A0A6J1GMS2 (ras-related protein RABA5b-like OS=Cucurbita moschata OX=3662 GN=LOC111455869 PE=4 SV=1)

HSP 1 Score: 416 bits (1068), Expect = 1.57e-146
Identity = 211/215 (98.14%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAAD+DQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADEDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFEL+VREIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy TrEMBL
Match: A0A6J1JWC2 (ras-related protein RABA5e-like OS=Cucurbita maxima OX=3661 GN=LOC111488471 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 1.29e-145
Identity = 210/215 (97.67%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR+SFDSVKRWLDELG HCDTATI
Sbjct: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTSFDSVKRWLDELGGHCDTATI 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNV+TAFEL+VREIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVRTAFELVVREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ
Sbjct: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy TrEMBL
Match: A0A0A0K5A2 (RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 2.57e-136
Identity = 196/215 (91.16%), Postives = 208/215 (96.74%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           MAA+DDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK
Sbjct: 1   MAANDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDI+RR++FDS KRWLDELGVHCDTAT+
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDITRRTTFDSAKRWLDELGVHCDTATV 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           RMLVGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFEL++REIYNNV+R
Sbjct: 121 RMLVGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIYNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           K LNSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 181 KVLNSDSYKAELSENRVSLADGGASSKKGFSCCSQ 215

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy TrEMBL
Match: A0A5A7SJW3 (Ras-related protein RABA5b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00310 PE=4 SV=1)

HSP 1 Score: 386 bits (992), Expect = 6.28e-135
Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           DDDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   DDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR++FDS KRWLDELGVHCDTAT+RML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSAKRWLDELGVHCDTATVRML 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFEL++REI+NNV+RK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIFNNVSRKVL 184

Query: 184 NSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           NSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 185 NSDSYKAELSENRVSLADGGASSKKGFSCCSQ 216

[Close]

BLAST of Cp4.1LG12g10780 vs. ExPASy TrEMBL
Match: A0A1S3C7M2 (ras-related protein RABA5b OS=Cucumis melo OX=3656 GN=LOC103497619 PE=4 SV=1)

HSP 1 Score: 386 bits (992), Expect = 6.28e-135
Identity = 194/212 (91.51%), Postives = 205/212 (96.70%), Query Frame = 0


Query: 4   DDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIK 63
           DDDQGGE+YLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKE+K
Sbjct: 5   DDDQGGEEYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEVK 64

Query: 64  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRML 123
           AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRR++FDS KRWLDELGVHCDTAT+RML
Sbjct: 65  AQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRTTFDSAKRWLDELGVHCDTATVRML 124

Query: 124 VGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKAL 183
           VGNKCDLENIRDV V EGK LAEEEGLFFMETSALDSTNV+TAFEL++REI+NNV+RK L
Sbjct: 125 VGNKCDLENIRDVSVEEGKNLAEEEGLFFMETSALDSTNVRTAFELVIREIFNNVSRKVL 184

Query: 184 NSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 215
           NSDS+KAELS NRVSLAD GASSKKGFSCCSQ
Sbjct: 185 NSDSYKAELSENRVSLADGGASSKKGFSCCSQ 216

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR 10
Match: AT1G05810.1 (RAB GTPase homolog A5E )

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-89
Identity = 165/215 (76.74%), Postives = 191/215 (88.84%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+G E+YLFKIV+IGDSAVGKSNLLSR+ARNEF  NSKATIGVEFQTQ +EI+GKE+
Sbjct: 45  SSDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEV 104

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR++F+SV RWLDEL +H DT   RM
Sbjct: 105 KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARM 164

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLENIR V V EGK LAEEEGLFF+ETSALDSTNVKTAFE+++ +IYNNV+RK 
Sbjct: 165 LVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQ 224

Query: 183 LNSDSHKAELSVNRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K EL+VNRVSL  D  ++SK+  GFSCCS
Sbjct: 225 LNSDTYKDELTVNRVSLVKDDNSASKQSSGFSCCS 259

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR 10
Match: AT3G07410.1 (RAB GTPase homolog A5B )

HSP 1 Score: 323.9 bits (829), Expect = 9.5e-89
Identity = 166/218 (76.15%), Postives = 189/218 (86.70%), Query Frame = 0


Query: 1   MAADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGK 60
           M  +DD+ GE+YLFKIVLIGDSAVGKSNLLSRF+R+EFD NSKATIGVEFQTQ+VEI+GK
Sbjct: 1   MGKEDDR-GEEYLFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGK 60

Query: 61  EIKAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATI 120
           E+KAQIWDTAGQERFRAVTSAYYRGA GALIVYDI+R  +F+SVKRWL EL  HCDTA  
Sbjct: 61  EVKAQIWDTAGQERFRAVTSAYYRGAFGALIVYDITRGDTFESVKRWLQELNTHCDTAVA 120

Query: 121 RMLVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTR 180
           +MLVGNKCDLE+IR V V EGK LAEEEGLFFMETSALD+TNV  AFE+++REI+NNV+R
Sbjct: 121 QMLVGNKCDLEDIRAVSVEEGKALAEEEGLFFMETSALDATNVDKAFEIVIREIFNNVSR 180

Query: 181 KALNSDSHKAELSVNRVSLA---DAGASSKKGFSCCSQ 216
           K LNSD++KAELSVNRVSL    D   SS +  SCCS+
Sbjct: 181 KLLNSDAYKAELSVNRVSLVNNQDGSESSWRNPSCCSR 217

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR 10
Match: AT2G43130.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 322.0 bits (824), Expect = 3.6e-88
Identity = 159/213 (74.65%), Postives = 185/213 (86.85%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           +DDD+ GE+YLFKIV+IGDSAVGKSNLL+R+ARNEF+ NSKATIGVEFQTQ + IDGKE+
Sbjct: 2   SDDDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R S+F++V RWLDEL  H DT   +M
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           L+GNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++REIY+N++RK 
Sbjct: 122 LIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQ 181

Query: 183 LNSDSHKAELSVNRVSLADAGASSKKGFSCCSQ 216
           LNSDS+K EL+VNRVSL        K FSCCS+
Sbjct: 182 LNSDSYKEELTVNRVSLVKNENEGTKTFSCCSR 214

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR 10
Match: AT2G31680.1 (RAB GTPase homolog A5D )

HSP 1 Score: 319.7 bits (818), Expect = 1.8e-87
Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 0


Query: 3   ADDDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEI 62
           + DD+GGE+YLFKIV+IGDSAVGKSNLLSR+ARNEF+ +SKATIGVEFQTQ +EI+GKE+
Sbjct: 2   SSDDEGGEEYLFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEV 61

Query: 63  KAQIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRM 122
           KAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRRS+F+SV RWLDEL  H DT   RM
Sbjct: 62  KAQIWDTAGQERFRAVTSAYYRGAVGALVVYDISRRSTFESVGRWLDELKTHSDTTVARM 121

Query: 123 LVGNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKA 182
           LVGNKCDLE+IR V V EGK LAE EGLFFMETSALDSTNVKTAFE+++R+IY N++RK 
Sbjct: 122 LVGNKCDLESIRAVSVEEGKALAETEGLFFMETSALDSTNVKTAFEMVIRDIYTNISRKQ 181

Query: 183 LNSDSHKAELSV-NRVSLA-DAGASSKK--GFSCCS 215
           LNSD++K ELS+ NRVSL  D   SS +  GFSCCS
Sbjct: 182 LNSDTYKTELSMKNRVSLVKDDNKSSTQGFGFSCCS 217

[Close]

BLAST of Cp4.1LG12g10780 vs. TAIR 10
Match: AT5G47520.1 (RAB GTPase homolog A5A )

HSP 1 Score: 261.5 bits (667), Expect = 5.8e-70
Identity = 140/216 (64.81%), Postives = 167/216 (77.31%), Query Frame = 0


Query: 5   DDQGGEDYLFKIVLIGDSAVGKSNLLSRFARNEFDNNSKATIGVEFQTQVVEIDGKEIKA 64
           +D   EDYLFKIVLIGDSAVGKSNLL+RFAR+EF  NSK+TIGVEFQTQ ++I+GKEIKA
Sbjct: 6   EDDKSEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKA 65

Query: 65  QIWDTAGQERFRAVTSAYYRGAVGALIVYDISRRSSFDSVKRWLDELGVHCDTATIRMLV 124
           QIWDTAGQERFRAVTSAYYRGAVGAL+VYDISRR +F S+ RWL+EL  H D   + +LV
Sbjct: 66  QIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFHSIGRWLNELHTHSDMNVVTILV 125

Query: 125 GNKCDLENIRDVHVGEGKYLAEEEGLFFMETSALDSTNVKTAFELIVREIYNNVTRKALN 184
           GNK DL+++R+V   EGK LAE +GLFFMETSALDS+NV  AFE +V+EIYN ++RK ++
Sbjct: 126 GNKSDLKDLREVSTAEGKALAEAQGLFFMETSALDSSNVAAAFETVVKEIYNILSRKVMS 185

Query: 185 SD----SHKAELSVNR--VSLADAGASSKKGFSCCS 215
           S        A LS  +  V  +D     KKG  CCS
Sbjct: 186 SQELNKQDPASLSNGKKVVIPSDGQGEFKKG-GCCS 220

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19892	4.6e-88	76.74	Ras-related protein RABA5e OS=Arabidopsis thaliana OX=3702 GN=RABA5E PE=2 SV=1	[more]
Q9SRS5	1.3e-87	76.15	Ras-related protein RABA5b OS=Arabidopsis thaliana OX=3702 GN=RABA5B PE=1 SV=1	[more]
P28187	5.1e-87	74.65	Ras-related protein RABA5c OS=Arabidopsis thaliana OX=3702 GN=RABA5C PE=1 SV=1	[more]
Q9SIP0	2.5e-86	76.39	Ras-related protein RABA5d OS=Arabidopsis thaliana OX=3702 GN=RABA5D PE=1 SV=1	[more]
Q9FGK5	8.2e-69	64.81	Ras-related protein RABA5a OS=Arabidopsis thaliana OX=3702 GN=RABA5A PE=1 SV=1	[more]

BLAST of Cp4.1LG12g10780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953267.1	3.25e-146	98.14	ras-related protein RABA5b-like [Cucurbita moschata]	[more]
KAG7014536.1	4.61e-146	98.14	Ras-related protein RABA5e [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6576014.1	1.32e-145	97.67	Ras-related protein RABA5e, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022991984.1	2.67e-145	97.67	ras-related protein RABA5e-like [Cucurbita maxima]	[more]
XP_023549172.1	1.27e-143	96.28	ras-related protein RABA5b-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG12g10780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMS2	1.57e-146	98.14	ras-related protein RABA5b-like OS=Cucurbita moschata OX=3662 GN=LOC111455869 PE...	[more]
A0A6J1JWC2	1.29e-145	97.67	ras-related protein RABA5e-like OS=Cucurbita maxima OX=3661 GN=LOC111488471 PE=4...	[more]
A0A0A0K5A2	2.57e-136	91.16	RAB11G OS=Cucumis sativus OX=3659 GN=Csa_7G368110 PE=4 SV=1	[more]
A0A5A7SJW3	6.28e-135	91.51	Ras-related protein RABA5b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3C7M2	6.28e-135	91.51	ras-related protein RABA5b OS=Cucumis melo OX=3656 GN=LOC103497619 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05810.1	3.3e-89	76.74	RAB GTPase homolog A5E	[more]
AT3G07410.1	9.5e-89	76.15	RAB GTPase homolog A5B	[more]
AT2G43130.1	3.6e-88	74.65	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G31680.1	1.8e-87	76.39	RAB GTPase homolog A5D	[more]
AT5G47520.1	5.8e-70	64.81	RAB GTPase homolog A5A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 117..130 score: 47.89 coord: 152..174 score: 43.13 coord: 14..35 score: 52.57 coord: 37..53 score: 33.53 coord: 55..77 score: 56.52
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.9E-102 score: 356.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.9E-27 score: 107.2
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..212 e-value: 2.1E-5 score: 27.4
None	No IPR available	PANTHER	PTHR24073:SF1069	RAS-RELATED PROTEIN RABA5B	coord: 1..215
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 1..215
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..213 score: 33.894306
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..182 score: 9.708656
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 8.01682E-107 score: 302.557
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..177 e-value: 3.6E-13 score: 48.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 1.6E-60 score: 203.4
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 7..200 score: 16.614616
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 8..213 e-value: 9.2E-68 score: 229.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..183
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..170 e-value: 2.1E-36 score: 123.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10780.1	Cp4.1LG12g10780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding