Cp4.1LG12g10290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g10290
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Glutaredoxin-C5
Location	Cp4.1LG12: 9526133 .. 9529623 (-)
RNA-Seq Expression	Cp4.1LG12g10290
Synteny	Cp4.1LG12g10290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGATCTTCGGCAAAAGTAAAGCGGGAGTGAGTTTGTGATAGGTCACAGCAAATTCACAGGAGGAAGAAGGAGACCTTCAACTTGAAATCAATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCTTTTTACAACGCCTGCGCATCCAAATCCATTTCAATCTCCAAACACAATGCCCTCAACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCCTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTGAGTTCAAATCTCATCCATCTCATCTTTATATTTGTAATGCTTTTTTTCGATTTCCTTCGTGTTCTCTTTCCTTTTCCAGATTTGGGTTTCTTGAGTTTATTGGAAATATTTTGAAGCCGGATCGTTCGTTGGTAATCTCTTTTTTGAAGGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTAATTGAATTGGATGAATTAGGTACTTTTTCTTCTATTCTTATTACACTTGCCGGTAGATTTGCTTGAGGGGATCTGAGTACTGAAATCACTTTTTTTCCCTCTATGACGATAACTGCCATTCCTGTCATATGTTCTTACTATTAACTTAAATTTTTGGATTAAGTTGTAAGTTAATTGTTGAGGACTGTTGGGAGAGGAGTCTTACCTTGGCTAATTAAGGAGAAGATGATAGGTTTATAAGTAAGGAATACTATCTTCATTGGTATTGGTATGAGGTCTTTTGGGGAAACCAAAAGCAAAGTCACGAGAGCTTATGCTCAAAGTGAACAAGATCATGCCATTGTGGAGATTTGTGGTTCCTAACATGGTATAGAGTCATGTCAATAAAATCCCCAAATGTCGAACAAAGAAGTTGTGAGCCTCAAAGATTAGTCAAAAGTGACTCAAGTGTCGAACAAAATGTGTACTTTGTTTGAGGACTCCAGAGAAGGAGTCGAGTCTCGATTAAGGGGAGGCTGTTCGAGGGGAGGATTGTTGGGAGAGGAGTCACACATTGGCTAATTAAGGGAAGATTATGAGTTTATAAGTAAGAAATACTAACTTCATTGGTATGAGGCCTTTTTGGGAAACCAAAAACAAAGCCATGAAAGGCATTTAAAGTGGACAATATTATACCATTGTGAAAATTCGTGGTTCCTAACACTAATATGATCTCAGACCTAGAGATACTCAATTTAAGCCGTATTCGACCCTTGTTTGTTACTTTCTTCTGAATTGATGATGTTAATAGTTCATGTGTTAGCTTGTATGAATCAAATTGATATCCTTTAGCTATTTGCTTTGATTTAAACCATCGTGAGTTTTTCATTGCATTTAATGTCTTCTTGAATCCGTTTATGCATCTTGTAAGCTGACAAGCTTTTTCCCTCCAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACGGGACAACATACGGTACCAAATGTTTTCATCGGTTAGTATTGCTTAATCACAATTATCAATCTTATGTATGTTGAAAATATTATCATTTTATGTTTACGTGGTTCTCTGTTTTAGTTATGAAACTTGGTGCTTTCACATTTTCATCGATTAACATTTGATACGTACAAAAACATTGCTTCTAATAGTGATTTTGTGTCTAATCTTCATTGAATACCTTTACTTATGATCCCGAACATACCCCTTGGTTCGATATAACCATCTAGAAATAAAAATGGTTGTCTATATGCTGAGAACCGAAGCATATAGAGGGGTTTAGTTTTGGATTTTCGGTCTCAGTAAATAAGTAGAGCACGACGTGTTAGACCCTCAATCGGGGGACACGTGACTTGGCTCTAGGTGTCTTACCTGAGTCTAGATCTGATCATGTATGGGGTGGCACACTCAAAAGGATGGGTCCAAGGAAGGTGGCAACATTTATGCGTAGTAGGTGGTTGTCGCTCTGACAATTGCACGAATGAATGCTGCTTGTTAAGAGACAAAGACACTTTAGTTTGAGTATTGTGTCTATGTCCATATCCATGCTTCTTAGTTTGTGTATACATACTTTGTTCTTGGACTTGAAGCAAGTGATTTTATATATGAAGTTTGAAAATGGGATAGGAAGATCCTTTTTCCAACCTGTACTCATACTTTTTCGTGTTTATGGATTGCTCGTACAATCCACAAGCATGCTTACTAATAGGGGAAGCGCCTCAGCTTCGCATCATCCCCGATATATATTTGTGAAGAACCTCAATGAACTAACTACTCACTGCTTGAGCTTACGTTAGTCGTAGAAACCGCTCACTACTATGTGCTAAGTTTCTTCCTTCCCTCCACGTCTTTCTTGTTTTAGGAGACGGTGGAGGTTTTTTGACCCACCACTGATTTAAACCACAAAACTCTAGCTTTGCCTCTAGAAAAGTTCCATGGACAAGCTGAAAATGCCTCGGAGCACCTCTTAGCGAACTATATCCTGTATCAGCCGATCAATCAACAAAGATTTGAATAATGACTGACTCGTTTTTGAGCCTACGAAAGGAAATTTCATTAGAACATATAACAAATGCACGTACTATCCACGTAGAAGAAATCCCTCCCCCCCCCCCCCCCCCCNGCCCCTTTGTGTTGTTTCGAATAACGACTACTGTTCTATTTCATGGAGTTTCATCATCTAAAGATTTTTCGATCTAGTTTGGTTTGTATTGCTTATTCTTGTGCGCGTACCTAGTATTGTTTAAACTCACATACCTCTTTCTGTGGCCAGGGGGCAAGCACATAGGCGGTTGTACAGGTACATTTTTTTTTTTTTTTTACCAAAGCTTTCATTCAATGGAAACATACATTACTTGATTCACTTATATTGATTATCGATGTCGCTTGTGCTCGCCGTGATGATGCAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTGTCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCTATAGGCACATTTTGTTTTCTTAGCCATGTGCTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGACACTTGCGTTTCTAGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGCAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGTCTTCCATTTCCGTCAAAATGACCTGGCCTCCCTTGCCCGGTTTACCGTCCAGGCTCCCTTTCCTGTCTATGCTATGCTCCTATGGCGCAGGCTTACCACGTTCCGCGCCTGTAACGTTTTTGCCAAACGGTCTTTGTCAGTAGCGTTATCCTCTCTACTGGTTGTATGGTCTAGTTCCTCCGGGTTGTTTTTAAGGTATTTAGA

mRNA sequence

TATGATCTTCGGCAAAAGTAAAGCGGGAGTGAGTTTGTGATAGGTCACAGCAAATTCACAGGAGGAAGAAGGAGACCTTCAACTTGAAATCAATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCTTTTTACAACGCCTGCGCATCCAAATCCATTTCAATCTCCAAACACAATGCCCTCAACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCCTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTAATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACGGGACAACATACGGTACCAAATGTTTTCATCGGGGGCAAGCACATAGGCGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTGTCTGAAGCGAATGCTAAAAATACAGAGACATAAGGCTATAGGCACATTTTGTTTTCTTAGCCATGTGCTGACTGACCTGTTGATTTTCTTAATTCTACCTCGAGTGACACTTGCGTTTCTAGTTAGGAACATGTATTTTAAGATATTTGTGGATGCATTTGTTTCAAGGCAGGATCTCCAGTTTATGCATGAAATAAGAGAGCATTTTATTCCCATTTGGAAAGAAAAGTCTTCCATTTCCGTCAAAATGACCTGGCCTCCCTTGCCCGGTTTACCGTCCAGGCTCCCTTTCCTGTCTATGCTATGCTCCTATGGCGCAGGCTTACCACGTTCCGCGCCTGTAACGTTTTTGCCAAACGGTCTTTGTCAGTAGCGTTATCCTCTCTACTGGTTGTATGGTCTAGTTCCTCCGGGTTGTTTTTAAGGTATTTAGA

Coding sequence (CDS)

ATGGCAGTTCCTTCCAATTTCACCTCTCCTCCTCTAACTTCTCATCGCACTCTTTCCTTCTTCTTCAAAGCTTCTGTTTTATCCCTTCCTTTTTACAACGCCTGCGCATCCAAATCCATTTCAATCTCCAAACACAATGCCCTCAACAATGGATCCACGAGGATCAGACCTATGTCGATTAGAGCTGTCTCCTCCTCCTCCTCTTCTTCTTCTTCCTTTGGTTCTAGACTCGAGGAGAGTGTCAAAACTACAATTACTCAGAATCCTGTTGTTGTTTACTCCAAGACATGGTGTTCGTATTCTTCTGAGGTTAAGGCGTTGTTCAAGAGGCTTGGAGCGCAGCCATTGGTAATTGAATTGGATGAATTAGGTCCCCAAGGGCCACAACTGCAAAAGGTACTTGAGAGGCTTACGGGACAACATACGGTACCAAATGTTTTCATCGGGGGCAAGCACATAGGCGGTTGTACAGATACTGTGAAACTATACCGAAAAGGAGAGCTCGAGCCTTTGCTGTCTGAAGCGAATGCTAAAAATACAGAGACATAA

Protein sequence

MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTET

Homology

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BLAST of Cp4.1LG12g10290 vs. ExPASy Swiss-Prot
Match: Q8GWS0 (Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.9e-49
Identity = 100/153 (65.36%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 34  ACASKSISI----SKHNALNNGSTRIRPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNP 93
           +C+S S S+    S +      S  +R M+  + S++SSSSSSFGSR+EES++ T+T+N 
Sbjct: 23  SCSSYSFSLIYVGSPYKRCLKQSCSVRAMT-SSSSAASSSSSSFGSRMEESIRKTVTENT 82

Query: 94  VVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 153
           VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKVLERLTGQHTVPNVF+ 
Sbjct: 83  VVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVC 142

Query: 154 GKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 183
           GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 143 GKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

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BLAST of Cp4.1LG12g10290 vs. ExPASy Swiss-Prot
Match: Q0J3L4 (Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45
Identity = 91/119 (76.47%), Postives = 102/119 (85.71%), Query Frame = 0


Query: 56  RPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQP 115
           R  S+   +SSSS  SSFGSR+E+SVK T+  NPVV+YSK+WCSYS EVKALFKR+G QP
Sbjct: 38  RARSLATRASSSSPDSSFGSRMEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQP 97

Query: 116 LVIELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSE 175
            VIELD+LG QGPQLQKVLERLTGQ TVPNVFIGGKHIGGCTDTVKL+RKGEL  +LSE
Sbjct: 98  HVIELDQLGAQGPQLQKVLERLTGQSTVPNVFIGGKHIGGCTDTVKLHRKGELATMLSE 156

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BLAST of Cp4.1LG12g10290 vs. ExPASy Swiss-Prot
Match: Q8LBS4 (Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS12 PE=1 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-44
Identity = 100/181 (55.25%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISKHNALNNGSTRIRPMSIR 64
           +N T   L S+  +SF   + + +   LPF        I I+    L       R  S++
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPL-------RCSSVK 68

Query: 65  AVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELD 124
           A+SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD
Sbjct: 69  AMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELD 128

Query: 125 ELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTE 183
           +LG +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+DT++L+ KGELE +L+EAN KN +
Sbjct: 129 QLGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEANGKNGQ 179

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BLAST of Cp4.1LG12g10290 vs. ExPASy Swiss-Prot
Match: O81187 (Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 52/93 (55.91%), Postives = 64/93 (68.82%), Query Frame = 0


Query: 85  ITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVP 144
           ++ N VVV+SKT+C Y + VK L  +LGAQ  VIELD     G  LQ  L   TGQ TVP
Sbjct: 10  VSSNSVVVFSKTFCPYCTSVKQLLNQLGAQFKVIELDS-ESDGSDLQNALAEWTGQRTVP 69

Query: 145 NVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 178
           NVFIGGKHIGGC  T  ++++G+L PLL+EA A
Sbjct: 70  NVFIGGKHIGGCDKTTGMHQEGKLIPLLTEAGA 101

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BLAST of Cp4.1LG12g10290 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 5.4e-21
Identity = 53/96 (55.21%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 82  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 141
           K T+   PVVVYSK++C +   VK LF++LGA    IELD     G +LQ  L   TGQ 
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDG-ESDGSELQSALAEWTGQR 66

Query: 142 TVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 178
           TVPNVFI GKHIGGC DT+ L  +G+L PLL+EA A
Sbjct: 67  TVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGA 101

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BLAST of Cp4.1LG12g10290 vs. NCBI nr
Match: XP_023549357.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351 bits (900), Expect = 1.08e-121
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60

Query: 61  RAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120
           RAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL
Sbjct: 61  RAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120

Query: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT 180
           DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT
Sbjct: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT 180

Query: 181 ET 182
           ET
Sbjct: 181 ET 182

[Close]

BLAST of Cp4.1LG12g10290 vs. NCBI nr
Match: KAG6576070.1 (Glutaredoxin-C5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014587.1 Glutaredoxin-C5, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (855), Expect = 7.06e-115
Identity = 178/183 (97.27%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS-KHNALNNGSTRIRPMS 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS KHN    GSTRIRPMS
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN----GSTRIRPMS 60

Query: 61  IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120
           IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE
Sbjct: 61  IRAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIE 120

Query: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 180
           LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN
Sbjct: 121 LDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKN 179

Query: 181 TET 182
           TET
Sbjct: 181 TET 179

[Close]

BLAST of Cp4.1LG12g10290 vs. NCBI nr
Match: XP_022954295.1 (glutaredoxin-C5, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 329 bits (843), Expect = 4.94e-113
Identity = 178/184 (96.74%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS-KHNALNNGSTRIRPMS 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS KHN    GSTRIRPMS
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN----GSTRIRPMS 60

Query: 61  IRAVSSSSSSSSS-FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI 120
           IRAVSSSSSSSSS FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI
Sbjct: 61  IRAVSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI 120

Query: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180
           ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK
Sbjct: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180

Query: 181 NTET 182
           NTET
Sbjct: 181 NTET 180

[Close]

BLAST of Cp4.1LG12g10290 vs. NCBI nr
Match: XP_022991298.1 (monothiol glutaredoxin-S10-like [Cucurbita maxima])

HSP 1 Score: 319 bits (817), Expect = 3.81e-109
Identity = 168/182 (92.31%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTSPPLT HRTLS  FK  VLSLPFYNACASKSISISKHNAL NGS RIRPMSI
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60

Query: 61  RAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120
           RA       SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL
Sbjct: 61  RA-------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120

Query: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT 180
           DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT
Sbjct: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT 175

Query: 181 ET 182
           ET
Sbjct: 181 ET 175

[Close]

BLAST of Cp4.1LG12g10290 vs. NCBI nr
Match: XP_038874858.1 (glutaredoxin-C5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 314 bits (804), Expect = 4.83e-107
Identity = 168/184 (91.30%), Postives = 173/184 (94.02%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTSP L S R+LSFFFKASV SLPFYN+C SKSISISKHNALN  STR RPMSI
Sbjct: 1   MAVPSNFTSPRLNSPRSLSFFFKASVYSLPFYNSCTSKSISISKHNALN-ASTRTRPMSI 60

Query: 61  RAVSSSSSSSSS--FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI 120
           +AVSSSSSSSSS  FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALF+RLG QPLVI
Sbjct: 61  KAVSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFQRLGVQPLVI 120

Query: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180
           ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK
Sbjct: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180

Query: 181 NTET 182
           N+ET
Sbjct: 181 NSET 183

[Close]

BLAST of Cp4.1LG12g10290 vs. ExPASy TrEMBL
Match: A0A6J1GS13 (glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111456587 PE=3 SV=1)

HSP 1 Score: 329 bits (843), Expect = 2.39e-113
Identity = 178/184 (96.74%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS-KHNALNNGSTRIRPMS 60
           MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISIS KHN    GSTRIRPMS
Sbjct: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISTKHN----GSTRIRPMS 60

Query: 61  IRAVSSSSSSSSS-FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI 120
           IRAVSSSSSSSSS FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI
Sbjct: 61  IRAVSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVI 120

Query: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180
           ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK
Sbjct: 121 ELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAK 180

Query: 181 NTET 182
           NTET
Sbjct: 181 NTET 180

[Close]

BLAST of Cp4.1LG12g10290 vs. ExPASy TrEMBL
Match: A0A6J1JVU3 (monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3 SV=1)

HSP 1 Score: 319 bits (817), Expect = 1.85e-109
Identity = 168/182 (92.31%), Postives = 168/182 (92.31%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTSPPLT HRTLS  FK  VLSLPFYNACASKSISISKHNAL NGS RIRPMSI
Sbjct: 1   MAVPSNFTSPPLTPHRTLSSSFKPPVLSLPFYNACASKSISISKHNALKNGSARIRPMSI 60

Query: 61  RAVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120
           RA       SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL
Sbjct: 61  RA-------SSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIEL 120

Query: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT 180
           DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT
Sbjct: 121 DELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNT 175

Query: 181 ET 182
           ET
Sbjct: 181 ET 175

[Close]

BLAST of Cp4.1LG12g10290 vs. ExPASy TrEMBL
Match: A0A5D3DLT6 (Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001430 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 2.57e-102
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV SLPFYN+C SKSISISKHN+LN G TR R MSI
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLN-GFTRTRSMSI 70

Query: 61  RAVSSSSSSSSS---FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++VSSSSSSSSS   FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Cp4.1LG12g10290 vs. ExPASy TrEMBL
Match: A0A1S3CB05 (glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 2.57e-102
Identity = 162/184 (88.04%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV SLPFYN+C SKSISISKHN+LN G TR R MSI
Sbjct: 11  MAVPSNFTSVPPNSPRPLSFFFKASVFSLPFYNSCTSKSISISKHNSLN-GFTRTRSMSI 70

Query: 61  RAVSSSSSSSSS---FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++VSSSSSSSSS   FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

[Close]

BLAST of Cp4.1LG12g10290 vs. ExPASy TrEMBL
Match: A0A0A0KA52 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087860 PE=3 SV=1)

HSP 1 Score: 301 bits (770), Expect = 5.19e-102
Identity = 162/185 (87.57%), Postives = 167/185 (90.27%), Query Frame = 0


Query: 1   MAVPSNFTSPPLTSHRTLSFFFKASVLSLPFYNACASKSISISKHNALNNGSTRIRPMSI 60
           MAVPSNFTS P  S R LSFFFKASV  LPFYN+C SKSISISKHNA   G TR RPMSI
Sbjct: 11  MAVPSNFTSFPPNSPRPLSFFFKASVFPLPFYNSCTSKSISISKHNAFT-GFTRTRPMSI 70

Query: 61  RAVSSSSSSSSS---FGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLV 120
           ++VSSSSSSSSS   FGSRLEESVKTTITQNPVVVYSKTWCSYS EVKALFKRLG QPLV
Sbjct: 71  QSVSSSSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSFEVKALFKRLGVQPLV 130

Query: 121 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 180
           IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEP+LSEANA
Sbjct: 131 IELDELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPMLSEANA 190

Query: 181 KNTET 182
           KN+ET
Sbjct: 191 KNSET 194

[Close]

BLAST of Cp4.1LG12g10290 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 194.9 bits (494), Expect = 5.6e-50
Identity = 100/153 (65.36%), Postives = 124/153 (81.05%), Query Frame = 0


Query: 34  ACASKSISI----SKHNALNNGSTRIRPMSIRAVSSSSSSSSSFGSRLEESVKTTITQNP 93
           +C+S S S+    S +      S  +R M+  + S++SSSSSSFGSR+EES++ T+T+N 
Sbjct: 23  SCSSYSFSLIYVGSPYKRCLKQSCSVRAMT-SSSSAASSSSSSFGSRMEESIRKTVTENT 82

Query: 94  VVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQHTVPNVFIG 153
           VV+YSKTWCSY +EVK LFKRLG QPLV+ELD+LGPQGPQLQKVLERLTGQHTVPNVF+ 
Sbjct: 83  VVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNVFVC 142

Query: 154 GKHIGGCTDTVKLYRKGELEPLLSEANAKNTET 183
           GKHIGGCTDTVKL RKG+LE +L+EAN KN ++
Sbjct: 143 GKHIGGCTDTVKLNRKGDLELMLAEANGKNGQS 174

[Close]

BLAST of Cp4.1LG12g10290 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.1e-45
Identity = 100/181 (55.25%), Postives = 129/181 (71.27%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISKHNALNNGSTRIRPMSIR 64
           +N T   L S+  +SF   + + +   LPF        I I+    L       R  S++
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPL-------RCSSVK 68

Query: 65  AVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELD 124
           A+SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD
Sbjct: 69  AMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELD 128

Query: 125 ELGPQGPQLQKVLERLTGQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANAKNTE 183
           +LG +G QLQ VLE++TGQ+TVPNVFIGGKHIGGC+DT++L+ KGELE +L+EAN KN +
Sbjct: 129 QLGSEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEANGKNGQ 179

[Close]

BLAST of Cp4.1LG12g10290 vs. TAIR 10
Match: AT2G20270.2 (Thioredoxin superfamily protein )

HSP 1 Score: 166.0 bits (419), Expect = 2.8e-41
Identity = 100/208 (48.08%), Postives = 129/208 (62.02%), Query Frame = 0


Query: 5   SNFTSPPLTSHRTLSFFFKASVLS---LPFYNACASKSISISKHNALNNGSTRIRPMSIR 64
           +N T   L S+  +SF   + + +   LPF        I I+    L       R  S++
Sbjct: 9   ANMTWTSLNSNPAISFSMLSGIRNLGMLPFRRCLKPTVIGIASWPPL-------RCSSVK 68

Query: 65  AVSSSSSSSSSFGSRLEESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELD 124
           A+SSSSSSS   GS LEE+VKTT+ +NPVVVYSKTWCSYSS+VK+LFK L  +PLV+ELD
Sbjct: 69  AMSSSSSSS---GSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELD 128

Query: 125 EL---------------------------GPQGPQLQKVLERLTGQHTVPNVFIGGKHIG 183
           +L                           G +G QLQ VLE++TGQ+TVPNVFIGGKHIG
Sbjct: 129 QLVSLGKTSLPHDIGLKHLQKFWWFLAFPGSEGSQLQNVLEKITGQYTVPNVFIGGKHIG 188

[Close]

BLAST of Cp4.1LG12g10290 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-20
Identity = 49/99 (49.49%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 79  ESVKTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLT 138
           +  K  +    VVV+SKT+C Y   VK L ++LGA+   +ELD     G Q+Q  L   T
Sbjct: 4   QKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELD-TESDGSQIQSGLAEWT 63

Query: 139 GQHTVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 178
           GQ TVPNVFIGG HIGGC  T  L++ G+L PLL+EA A
Sbjct: 64  GQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGA 101

[Close]

BLAST of Cp4.1LG12g10290 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-20
Identity = 48/96 (50.00%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 82  KTTITQNPVVVYSKTWCSYSSEVKALFKRLGAQPLVIELDELGPQGPQLQKVLERLTGQH 141
           K  ++  PVVV+SKT+C Y   VK L  +LGA   V+ELDE+   G ++Q  L   TGQ 
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMS-DGGEIQSALSEWTGQT 82

Query: 142 TVPNVFIGGKHIGGCTDTVKLYRKGELEPLLSEANA 178
           TVPNVFI G HIGGC   ++  ++G+L PLL+EA A
Sbjct: 83  TVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGA 117

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWS0	7.9e-49	65.36	Glutaredoxin-C5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXC5 PE=1 SV=...	[more]
Q0J3L4	1.8e-45	76.47	Monothiol glutaredoxin-S10 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS10 PE...	[more]
Q8LBS4	1.5e-44	55.25	Monothiol glutaredoxin-S12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRX...	[more]
O81187	3.1e-21	55.91	Glutaredoxin OS=Vernicia fordii OX=73154 PE=3 SV=1	[more]
P55142	5.4e-21	55.21	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Cp4.1LG12g10290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549357.1	1.08e-121	100.00	glutaredoxin-C5, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576070.1	7.06e-115	97.27	Glutaredoxin-C5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] ...	[more]
XP_022954295.1	4.94e-113	96.74	glutaredoxin-C5, chloroplastic-like [Cucurbita moschata]	[more]
XP_022991298.1	3.81e-109	92.31	monothiol glutaredoxin-S10-like [Cucurbita maxima]	[more]
XP_038874858.1	4.83e-107	91.30	glutaredoxin-C5, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g10290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS13	2.39e-113	96.74	glutaredoxin-C5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC11145658...	[more]
A0A6J1JVU3	1.85e-109	92.31	monothiol glutaredoxin-S10-like OS=Cucurbita maxima OX=3661 GN=LOC111487992 PE=3...	[more]
A0A5D3DLT6	2.57e-102	88.04	Glutaredoxin-C5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G0014...	[more]
A0A1S3CB05	2.57e-102	88.04	glutaredoxin-C5, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498937 PE=3 SV=1	[more]
A0A0A0KA52	5.19e-102	87.57	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G08786...	[more]

BLAST of Cp4.1LG12g10290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28730.1	5.6e-50	65.36	Glutaredoxin family protein	[more]
AT2G20270.1	1.1e-45	55.25	Thioredoxin superfamily protein	[more]
AT2G20270.2	2.8e-41	48.08	Thioredoxin superfamily protein	[more]
AT5G40370.1	4.7e-20	49.49	Glutaredoxin family protein	[more]
AT5G63030.1	4.7e-20	50.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 150..163 score: 47.62 coord: 136..149 score: 57.14 coord: 90..108 score: 36.18
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 90..171 e-value: 5.2E-27 score: 91.9
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 90..153 e-value: 1.3E-15 score: 57.3
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 71..182 e-value: 5.2E-40 score: 137.6
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 64..180
None	No IPR available	PANTHER	PTHR45694:SF18	GLUTAREDOXIN 2	coord: 64..180
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 78..179 score: 24.225859
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 89..171 e-value: 3.75549E-43 score: 136.901
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 78..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10290.1	Cp4.1LG12g10290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0015038	glutathione disulfide oxidoreductase activity
molecular_function	GO:0097573	glutathione oxidoreductase activity