Cp4.1LG12g10280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g10280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	maternal effect embryo arrest 60
Location	Cp4.1LG12: 9448178 .. 9449612 (-)
RNA-Seq Expression	Cp4.1LG12g10280
Synteny	Cp4.1LG12g10280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGAACCTTAGTATCAGAGGGTTCGAATCCCTCCTCGCCCACAACCAGCCATGGGCTCGAGGTCGAGATTGACGAGAAATGACCAAGAAAATGGATCCAAGTTTGAAAAGCTTGACGAAGATGCACAAGCACATACACAAACCCAAACCAAACGCTATCTCTTTCACTTCCATACACCCTTTCTTTTGCTTCTTCCAAAAACTTCCCCAACTTCAATCCCTCCAAGTAATCCAATCCCCACCCGCCAACTTCTCTTCCCCCTCTCTCAATACTCAATCCGCCATCGCCAAATTCCGCCTTCAATGGACGAGTAAGCTCAATTTCTCTTCGATTCCCCCTTCTTTTTCTTTTCATTTTCAGCTCATTTTCCTGTTTCTAATCAGATCCGAGACGTACCCTAAGGAGTACTACAATGATCGGAGCAGAGCAGATGGAATCCGGACTTCATCGGCGTTGTCTTCTTCGTCCACCACCAGTGTCCACGTTACGGCACTGGACGGTCTCGTCAACGTCAATTCACTTTTCACCATCGCTGTATTTGTAGGGCTTTCGTTGACCACGCCTGGGCAGCATAGTCTCCAGAATTCCTCGGTCTGCGATGCTGGCATTGATGTTGCTCGGAAGCTTCTGGTTTTCGAGGTCGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCCATTAATCTTTTGAATAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATTTGAAGGTGCTGAGATTGGGGATGTTGGCTTCCGCCGTTGGATCGGTCATGGGTTGCTTGTTTCTGATGCTGTCCATGGTGAATGTCATCCAAATTCGCCTTGGAATGCTGTCCTGTGGAAGCAAGTCCGCGGTTCATGCTGTGACTGCGCTTCTTGTTCTGGTTACCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGATTGAATGCTTAATCCACGATGATTTATATATATATATATATATGCTTCTCTTTTGCTTATTGTTAGTTACACGTATTCTTGAGCTGCCCTCTGTTGGTTTCCCTTGACCTCCATTGCACTCTATTTGAGCTTATTTCAGCTGCGCAATGTTAAAGAATATGATTATACCCTCACCTATCAGCTTAAAGTGTTCTAGAGTTTAGTGATCACTACTATGGTTTGAACTCTTAATTTAAGCTTTTGGGTTTAATGGTAGTTTAATATGTATTAGCACATTAGCTTTTGAGCTTAGTGGTAGTTTATGTATTAGCACAGGAAGCTGTGTTCAAAGCCTTAAACTGCTTAGTTAAGCTTTTAAGGTTAGTGTCATTGTAACATTTATCTTGAATGGCTTTTTGTGTATATTGTTATGAGAAATGGGAATGACCCTCTTCGTATATTGTCTACTTTTGAGCTAGACCA

mRNA sequence

TACGAACCTTAGTATCAGAGGGTTCGAATCCCTCCTCGCCCACAACCAGCCATGGGCTCGAGGTCGAGATTGACGAGAAATGACCAAGAAAATGGATCCAAGTTTGAAAAGCTTGACGAAGATGCACAAGCACATACACAAACCCAAACCAAACGCTATCTCTTTCACTTCCATACACCCTTTCTTTTGCTTCTTCCAAAAACTTCCCCAACTTCAATCCCTCCAAGTAATCCAATCCCCACCCGCCAACTTCTCTTCCCCCTCTCTCAATACTCAATCCGCCATCGCCAAATTCCGCCTTCAATGGACGAATCCGAGACGTACCCTAAGGAGTACTACAATGATCGGAGCAGAGCAGATGGAATCCGGACTTCATCGGCGTTGTCTTCTTCGTCCACCACCAGTGTCCACGTTACGGCACTGGACGGTCTCGTCAACGTCAATTCACTTTTCACCATCGCTGTATTTGTAGGGCTTTCGTTGACCACGCCTGGGCAGCATAGTCTCCAGAATTCCTCGGTCTGCGATGCTGGCATTGATGTTGCTCGGAAGCTTCTGGTTTTCGAGGTCGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCCATTAATCTTTTGAATAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATTTGAAGGTGCTGAGATTGGGGATGTTGGCTTCCGCCGTTGGATCGGTCATGGGTTGCTTGTTTCTGATGCTGTCCATGGTGAATGTCATCCAAATTCGCCTTGGAATGCTGTCCTGTGGAAGCAAGTCCGCGGTTCATGCTGTGACTGCGCTTCTTGTTCTGGTTACCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGATTGAATGCTTAATCCACGATGATTTATATATATATATATATATGCTTCTCTTTTGCTTATTGTTAGTTACACGTATTCTTGAGCTGCCCTCTGTTGGTTTCCCTTGACCTCCATTGCACTCTATTTGAGCTTATTTCAGCTGCGCAATGTTAAAGAATATGATTATACCCTCACCTATCAGCTTAAAGTGTTCTAGAGTTTAGTGATCACTACTATGGTTTGAACTCTTAATTTAAGCTTTTGGGTTTAATGGTAGTTTAATATGTATTAGCACATTAGCTTTTGAGCTTAGTGGTAGTTTATGTATTAGCACAGGAAGCTGTGTTCAAAGCCTTAAACTGCTTAGTTAAGCTTTTAAGGTTAGTGTCATTGTAACATTTATCTTGAATGGCTTTTTGTGTATATTGTTATGAGAAATGGGAATGACCCTCTTCGTATATTGTCTACTTTTGAGCTAGACCA

Coding sequence (CDS)

ATGGGCTCGAGGTCGAGATTGACGAGAAATGACCAAGAAAATGGATCCAAGTTTGAAAAGCTTGACGAAGATGCACAAGCACATACACAAACCCAAACCAAACGCTATCTCTTTCACTTCCATACACCCTTTCTTTTGCTTCTTCCAAAAACTTCCCCAACTTCAATCCCTCCAAGTAATCCAATCCCCACCCGCCAACTTCTCTTCCCCCTCTCTCAATACTCAATCCGCCATCGCCAAATTCCGCCTTCAATGGACGAATCCGAGACGTACCCTAAGGAGTACTACAATGATCGGAGCAGAGCAGATGGAATCCGGACTTCATCGGCGTTGTCTTCTTCGTCCACCACCAGTGTCCACGTTACGGCACTGGACGGTCTCGTCAACGTCAATTCACTTTTCACCATCGCTGTATTTGTAGGGCTTTCGTTGACCACGCCTGGGCAGCATAGTCTCCAGAATTCCTCGGTCTGCGATGCTGGCATTGATGTTGCTCGGAAGCTTCTGGTTTTCGAGGTCGTGTCGTTTAGCTTTTTTCTGTTCTCGTCTCTTGTGGCGCAGGGTTTGAAGCTTGCCATTAATCTTTTGAATAGTAAGGATGTGGATGAGGCGTTTAGGGCACACATCAATTTGAAGGTGCTGAGATTGGGGATGTTGGCTTCCGCCGTTGGATCGGTCATGGGTTGCTTGTTTCTGATGCTGTCCATGGTGAATGTCATCCAAATTCGCCTTGGAATGCTGTCCTGTGGAAGCAAGTCCGCGGTTCATGCTGTGACTGCGCTTCTTGTTCTGGTTACCTCTGCTCTTTTGGTCTATATTTCCACTGCTATCTATGCTTTTCTGCATTGA

Protein sequence

MGSRSRLTRNDQENGSKFEKLDEDAQAHTQTQTKRYLFHFHTPFLLLLPKTSPTSIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH

Homology

[Close]

BLAST of Cp4.1LG12g10280 vs. NCBI nr
Match: XP_023547454.1 (uncharacterized protein LOC111806395 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 521 bits (1342), Expect = 9.54e-186
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 1   MGSRSRLTRNDQENGSKFEKLDEDAQAHTQTQTKRYLFHFHTPFLLLLPKTSPTSIPPSN 60
           MGSRSRLTRNDQENGSKFEKLDEDAQAHTQTQTKRYLFHFHTPFLLLLPKTSPTSIPPSN
Sbjct: 1   MGSRSRLTRNDQENGSKFEKLDEDAQAHTQTQTKRYLFHFHTPFLLLLPKTSPTSIPPSN 60

Query: 61  PIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVH 120
           PIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVH
Sbjct: 61  PIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVH 120

Query: 121 VTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFL 180
           VTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFL
Sbjct: 121 VTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFL 180

Query: 181 FSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVI 240
           FSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVI
Sbjct: 181 FSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVI 240

Query: 241 QIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 282
           QIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH
Sbjct: 241 QIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 282

[Close]

BLAST of Cp4.1LG12g10280 vs. NCBI nr
Match: XP_022991542.1 (uncharacterized protein LOC111488123 isoform X3 [Cucurbita maxima])

HSP 1 Score: 411 bits (1057), Expect = 1.78e-142
Identity = 231/246 (93.90%), Postives = 236/246 (95.93%), Query Frame = 0


Query: 38  FHFHTPFLLLLPKTSPT-SIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYY 97
           F F  PF     +TSP+ +IPPSNPIPTRQLLFPLSQYSIR+RQIPPSM+ESETYPKEYY
Sbjct: 29  FTFIHPFFCFF-QTSPSFTIPPSNPIPTRQLLFPLSQYSIRNRQIPPSMNESETYPKEYY 88

Query: 98  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 157
           NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS
Sbjct: 89  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 148

Query: 158 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 217
           VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL
Sbjct: 149 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 208

Query: 218 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTA 277
           GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVLVTSALLVYISTA
Sbjct: 209 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVLVTSALLVYISTA 268

Query: 278 IYAFLH 282
           IYAFLH
Sbjct: 269 IYAFLH 273

[Close]

BLAST of Cp4.1LG12g10280 vs. NCBI nr
Match: KAG6576060.1 (hypothetical protein SDJN03_26699, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 398 bits (1022), Expect = 3.78e-137
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 63  PTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVT 122
           PTRQLLFP SQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSA+SSSSTTSVHVT
Sbjct: 54  PTRQLLFPFSQYSIRHRQIPPSMDESETYPKEYYNDRSRADGIRTSSAMSSSSTTSVHVT 113

Query: 123 ALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFS 182
           ALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFS
Sbjct: 114 ALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFS 173

Query: 183 SLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQI 242
           SLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQI
Sbjct: 174 SLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQI 233

Query: 243 RLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 282
           RLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH
Sbjct: 234 RLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 273

[Close]

BLAST of Cp4.1LG12g10280 vs. NCBI nr
Match: XP_022991540.1 (uncharacterized protein LOC111488123 isoform X1 [Cucurbita maxima])

HSP 1 Score: 392 bits (1007), Expect = 1.27e-134
Identity = 219/237 (92.41%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 38  FHFHTPFLLLLPKTSPT-SIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYY 97
           F F  PF     +TSP+ +IPPSNPIPTRQLLFPLSQYSIR+RQIPPSM+ESETYPKEYY
Sbjct: 29  FTFIHPFFCFF-QTSPSFTIPPSNPIPTRQLLFPLSQYSIRNRQIPPSMNESETYPKEYY 88

Query: 98  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 157
           NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS
Sbjct: 89  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 148

Query: 158 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 217
           VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL
Sbjct: 149 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 208

Query: 218 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYI 273
           GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVLVTSALL+++
Sbjct: 209 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVLVTSALLLHV 264

[Close]

BLAST of Cp4.1LG12g10280 vs. NCBI nr
Match: XP_022991541.1 (uncharacterized protein LOC111488123 isoform X2 [Cucurbita maxima])

HSP 1 Score: 382 bits (982), Expect = 6.55e-131
Identity = 213/228 (93.42%), Postives = 218/228 (95.61%), Query Frame = 0


Query: 38  FHFHTPFLLLLPKTSPT-SIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYY 97
           F F  PF     +TSP+ +IPPSNPIPTRQLLFPLSQYSIR+RQIPPSM+ESETYPKEYY
Sbjct: 29  FTFIHPFFCFF-QTSPSFTIPPSNPIPTRQLLFPLSQYSIRNRQIPPSMNESETYPKEYY 88

Query: 98  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 157
           NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS
Sbjct: 89  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 148

Query: 158 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 217
           VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL
Sbjct: 149 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 208

Query: 218 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 264
           GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVL
Sbjct: 209 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVL 255

[Close]

BLAST of Cp4.1LG12g10280 vs. ExPASy TrEMBL
Match: A0A6J1JM46 (uncharacterized protein LOC111488123 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488123 PE=4 SV=1)

HSP 1 Score: 411 bits (1057), Expect = 8.62e-143
Identity = 231/246 (93.90%), Postives = 236/246 (95.93%), Query Frame = 0


Query: 38  FHFHTPFLLLLPKTSPT-SIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYY 97
           F F  PF     +TSP+ +IPPSNPIPTRQLLFPLSQYSIR+RQIPPSM+ESETYPKEYY
Sbjct: 29  FTFIHPFFCFF-QTSPSFTIPPSNPIPTRQLLFPLSQYSIRNRQIPPSMNESETYPKEYY 88

Query: 98  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 157
           NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS
Sbjct: 89  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 148

Query: 158 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 217
           VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL
Sbjct: 149 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 208

Query: 218 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTA 277
           GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVLVTSALLVYISTA
Sbjct: 209 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVLVTSALLVYISTA 268

Query: 278 IYAFLH 282
           IYAFLH
Sbjct: 269 IYAFLH 273

[Close]

BLAST of Cp4.1LG12g10280 vs. ExPASy TrEMBL
Match: A0A6J1JT84 (uncharacterized protein LOC111488123 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488123 PE=4 SV=1)

HSP 1 Score: 392 bits (1007), Expect = 6.17e-135
Identity = 219/237 (92.41%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 38  FHFHTPFLLLLPKTSPT-SIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYY 97
           F F  PF     +TSP+ +IPPSNPIPTRQLLFPLSQYSIR+RQIPPSM+ESETYPKEYY
Sbjct: 29  FTFIHPFFCFF-QTSPSFTIPPSNPIPTRQLLFPLSQYSIRNRQIPPSMNESETYPKEYY 88

Query: 98  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 157
           NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS
Sbjct: 89  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 148

Query: 158 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 217
           VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL
Sbjct: 149 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 208

Query: 218 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYI 273
           GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVLVTSALL+++
Sbjct: 209 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVLVTSALLLHV 264

[Close]

BLAST of Cp4.1LG12g10280 vs. ExPASy TrEMBL
Match: A0A6J1JR13 (uncharacterized protein LOC111488123 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488123 PE=4 SV=1)

HSP 1 Score: 382 bits (982), Expect = 3.17e-131
Identity = 213/228 (93.42%), Postives = 218/228 (95.61%), Query Frame = 0


Query: 38  FHFHTPFLLLLPKTSPT-SIPPSNPIPTRQLLFPLSQYSIRHRQIPPSMDESETYPKEYY 97
           F F  PF     +TSP+ +IPPSNPIPTRQLLFPLSQYSIR+RQIPPSM+ESETYPKEYY
Sbjct: 29  FTFIHPFFCFF-QTSPSFTIPPSNPIPTRQLLFPLSQYSIRNRQIPPSMNESETYPKEYY 88

Query: 98  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 157
           NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS
Sbjct: 89  NDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS 148

Query: 158 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 217
           VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL
Sbjct: 149 VCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRL 208

Query: 218 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 264
           GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAV ALLVL
Sbjct: 209 GMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVAALLVL 255

[Close]

BLAST of Cp4.1LG12g10280 vs. ExPASy TrEMBL
Match: A0A6J1GPF8 (uncharacterized protein LOC111455936 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455936 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 7.08e-122
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 85  MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 144
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 145 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 204
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 205 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 264
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 265 VTSALLVYISTAIYAFLH 282
           VTSALLVYISTAIYAFLH
Sbjct: 181 VTSALLVYISTAIYAFLH 198

[Close]

BLAST of Cp4.1LG12g10280 vs. ExPASy TrEMBL
Match: A0A6J1GN18 (uncharacterized protein LOC111455936 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455936 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 5.05e-114
Identity = 186/189 (98.41%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 85  MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 144
           MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL
Sbjct: 1   MDESETYPKEYYNDRSRADGIRTSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSL 60

Query: 145 TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 204
           TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA
Sbjct: 61  TTPGQHSLQNSSVCDAGIDVARKLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEA 120

Query: 205 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 264
           FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL
Sbjct: 121 FRAHINLKVLRLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVL 180

Query: 265 VTSALLVYI 273
           VTSALL+++
Sbjct: 181 VTSALLLHV 189

[Close]

BLAST of Cp4.1LG12g10280 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 261.5 bits (667), Expect = 7.6e-70
Identity = 145/175 (82.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 108 SSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARK 167
           +S+ SS +TTSVHV+ALDGLVNVNSLFTIAVFVGLSL TPGQHSL+  S CDA  DVA+K
Sbjct: 15  ASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKK 74

Query: 168 LLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVM 227
           LLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR GM+ASAVGSVM
Sbjct: 75  LLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVM 134

Query: 228 GCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 283
           GCLFLMLSMVNVIQIRLG+LSCGSKSA  AV  L+ LV+SALL+YISTAIYAF H
Sbjct: 135 GCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

[Close]

BLAST of Cp4.1LG12g10280 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 261.5 bits (667), Expect = 7.6e-70
Identity = 145/175 (82.86%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 108 SSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVARK 167
           +S+ SS +TTSVHV+ALDGLVNVNSLFTIAVFVGLSL TPGQHSL+  S CDA  DVA+K
Sbjct: 15  ASSTSSLATTSVHVSALDGLVNVNSLFTIAVFVGLSLATPGQHSLEQRSSCDASADVAKK 74

Query: 168 LLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSVM 227
           LLVFEVVSFSFFLFSSLVAQGLKLA+NLLNSKDV+E FRAHIN+KVLR GM+ASAVGSVM
Sbjct: 75  LLVFEVVSFSFFLFSSLVAQGLKLALNLLNSKDVNEIFRAHINIKVLRWGMMASAVGSVM 134

Query: 228 GCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAFLH 283
           GCLFLMLSMVNVIQIRLG+LSCGSKSA  AV  L+ LV+SALL+YISTAIYAF H
Sbjct: 135 GCLFLMLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAFWH 189

[Close]

BLAST of Cp4.1LG12g10280 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.1 bits (505), Expect = 4.6e-51
Identity = 107/174 (61.49%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 107 TSSALSSSSTTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSSVCDAGIDVAR 166
           ++++ S++STTSVHVTALDG+V+ NSLFT+AVFVG+S   P   +L + + C AG DV R
Sbjct: 16  SNTSHSTTSTTSVHVTALDGIVSANSLFTVAVFVGISFDQPSDLTLTDRTECSAGRDVER 75

Query: 167 KLLVFEVVSFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRAHINLKVLRLGMLASAVGSV 226
            L+VFEV+SF+FFLFSSLVAQG+KLAINLLNSK+ DE F+A+IN  VLR G++ +A GS+
Sbjct: 76  DLVVFEVISFAFFLFSSLVAQGMKLAINLLNSKETDEVFKANINRDVLRFGVVGAAGGSI 135

Query: 227 MGCLFLMLSMVNVIQIRLGMLSCGSKSAVHAVTALLVLVTSALLVYISTAIYAF 281
           +GC+FL+LS+V+VIQ+RLG+LSCG+  A+H V  L+VLV+SAL VYI T  Y+F
Sbjct: 136 LGCVFLLLSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189

[Close]

BLAST of Cp4.1LG12g10280 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-30
Identity = 82/172 (47.67%), Postives = 112/172 (65.12%), Query Frame = 0


Query: 116 TTSVHVTALDGLVNVNSLFTIAVFVGLSLT-TPGQHSLQNSSVCDAGIDVARKLLVFEVV 175
           TTS+H+TALDG+VNVNSLFT+AVF+GL+   T   +SL     C     +A  L+ F V 
Sbjct: 2   TTSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVY 61

Query: 176 SFSFFLFSSLVAQGLKLAINLLNSKDVDEAFRA-----HINLKVLRLGMLASAVGSVMGC 235
           SF+ FLFSSL+A GLK A+ L  +     + R      ++N   LR GM+ S +GSV GC
Sbjct: 62  SFASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYYVNKTALRFGMVTSGLGSVCGC 121

Query: 236 LFLMLSMVNVIQIRLGMLSCGSKSAVH-AVTALLVLVTSALLVYISTAIYAF 281
            FLML+++NV+QI+LG L CG+    + AV  L++LV SAL +Y+S  +YAF
Sbjct: 122 GFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of Cp4.1LG12g10280 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.5 bits (280), Expect = 5.7e-25
Identity = 80/189 (42.33%), Postives = 116/189 (61.38%), Query Frame = 0


Query: 116 TTSVHVTALDGLVNVNSLFTIAVFVGLSLTTPGQHSLQNSS-----------VCDAGIDV 175
           TT +HVTA+DG+VNVNSLF++A+F+G  LTT G  +   SS           +   G  +
Sbjct: 18  TTLIHVTAIDGIVNVNSLFSLALFLG--LTTSGNITFPVSSSASENHHLRRCISAKGPAL 77

Query: 176 ARKLLVFEVVSFSFFLFSSLVAQGLKLAI----NLLNSKDVDEAFR------AHINLKVL 235
           A +L+   V SFS FLFSSL+A  LK AI       N   ++E  R        +NL  L
Sbjct: 78  AERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAAL 137

Query: 236 RLGMLASAVGSVMGCLFLMLSMVNVIQIRLGMLSC-GSKSAVHAVTALLVLVTSALLVYI 283
           R+G++AS V SV+GC FL +++V+++QI+LG L C  S  A+ A+  L+VLV SAL++Y+
Sbjct: 138 RVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIYV 197

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10280 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g10280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547454.1	9.54e-186	100.00	uncharacterized protein LOC111806395 [Cucurbita pepo subsp. pepo]	[more]
XP_022991542.1	1.78e-142	93.90	uncharacterized protein LOC111488123 isoform X3 [Cucurbita maxima]	[more]
KAG6576060.1	3.78e-137	99.09	hypothetical protein SDJN03_26699, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022991540.1	1.27e-134	92.41	uncharacterized protein LOC111488123 isoform X1 [Cucurbita maxima]	[more]
XP_022991541.1	6.55e-131	93.42	uncharacterized protein LOC111488123 isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG12g10280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JM46	8.62e-143	93.90	uncharacterized protein LOC111488123 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JT84	6.17e-135	92.41	uncharacterized protein LOC111488123 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JR13	3.17e-131	93.42	uncharacterized protein LOC111488123 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GPF8	7.08e-122	100.00	uncharacterized protein LOC111455936 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GN18	5.05e-114	98.41	uncharacterized protein LOC111455936 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cp4.1LG12g10280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07510.1	7.6e-70	82.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	7.6e-70	82.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	4.6e-51	61.49	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G05950.1	1.2e-30	47.67	maternal effect embryo arrest 60	[more]
AT3G46890.1	5.7e-25	42.33	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 85..281
None	No IPR available	PANTHER	PTHR33430:SF6	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 85..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10280.1	Cp4.1LG12g10280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane