Cp4.1LG12g09960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Glutaredoxin
Location	Cp4.1LG12: 9822762 .. 9823142 (+)
RNA-Seq Expression	Cp4.1LG12g09960
Synteny	Cp4.1LG12g09960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCATTACCAGGCAGAGCGCTCATGGGACTACTACATGCCGGCGACGGCAGCGAGAGACCCAGTGGACCGGGTGGTCCGGCTGGCGGCGGGGAGCGCAGTGGTGATATTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCCTGAAGCGGCTGCTGTGCGGAATGGGAGTGAGCTCAACGGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTGATGAGGCTCGTCGGAGCCGCCTCGCCGCCGGTGCCCGTCGTCTTTATTGGCGGGAAGCTGGTGGGGTCCATGGACAGGGTTATGGCTTCTCATATCAATGGCAGTTTGGTCCCTCTTCTCAAGGAAGCTGGGGCCTTGTGGCTTTAG

mRNA sequence

ATGATGCATTACCAGGCAGAGCGCTCATGGGACTACTACATGCCGGCGACGGCAGCGAGAGACCCAGTGGACCGGGTGGTCCGGCTGGCGGCGGGGAGCGCAGTGGTGATATTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCCTGAAGCGGCTGCTGTGCGGAATGGGAGTGAGCTCAACGGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTGATGAGGCTCGTCGGAGCCGCCTCGCCGCCGGTGCCCGTCGTCTTTATTGGCGGGAAGCTGGTGGGGTCCATGGACAGGGTTATGGCTTCTCATATCAATGGCAGTTTGGTCCCTCTTCTCAAGGAAGCTGGGGCCTTGTGGCTTTAG

Coding sequence (CDS)

ATGATGCATTACCAGGCAGAGCGCTCATGGGACTACTACATGCCGGCGACGGCAGCGAGAGACCCAGTGGACCGGGTGGTCCGGCTGGCGGCGGGGAGCGCAGTGGTGATATTCAGCGTGAGCAGCTGCTGCATGTGCCACGCCCTGAAGCGGCTGCTGTGCGGAATGGGAGTGAGCTCAACGGTGTACGAGCTGGACCACGACCCCAGAGGAAAAGAAATTGAAAGGGCTTTGATGAGGCTCGTCGGAGCCGCCTCGCCGCCGGTGCCCGTCGTCTTTATTGGCGGGAAGCTGGTGGGGTCCATGGACAGGGTTATGGCTTCTCATATCAATGGCAGTTTGGTCCCTCTTCTCAAGGAAGCTGGGGCCTTGTGGCTTTAG

Protein sequence

MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL

Homology

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BLAST of Cp4.1LG12g09960 vs. ExPASy Swiss-Prot
Match: Q6K609 (Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 2.6e-43
Identity = 96/135 (71.11%), Postives = 105/135 (77.78%), Query Frame = 0


Query: 2   MHYQAERSWDYYMPATA----ARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMG 61
           M Y A     +YMPA A        V RV RLA+ SAVV+FSVSSCCMCHA+KRL CGMG
Sbjct: 1   MQYGAAAEQAWYMPAAAPAPMVESAVARVERLASESAVVVFSVSSCCMCHAVKRLFCGMG 60

Query: 62  VSSTVYELDHDPRGKEIERALMRLVG-----AASPP-VPVVFIGGKLVGSMDRVMASHIN 121
           V  TV+ELD DPRG+E+ERAL RLVG     AASPP VPVVFIGGKLVG+MDRVMA+HIN
Sbjct: 61  VHPTVHELDLDPRGRELERALARLVGYGGPAAASPPVVPVVFIGGKLVGAMDRVMAAHIN 120

Query: 122 GSLVPLLKEAGALWL 127
           GSLVPLLKEAGALWL
Sbjct: 121 GSLVPLLKEAGALWL 135

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 8.5e-42
Identity = 91/130 (70.00%), Postives = 104/130 (80.00%), Query Frame = 0


Query: 6   AERSWDYYMP------ATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVS 65
           AE++W  YMP      A AA    +RV RLA+ SAVV+FSVSSCCMCHA+KRL CGMGV 
Sbjct: 8   AEQAW--YMPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVH 67

Query: 66  STVYELDHDPRGKEIERALMRLV---GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVP 125
             V+ELD DPRG+++ERAL RLV   GAA+  VPVVFIGGKLVG+MDRVMA+HINGSLVP
Sbjct: 68  PAVHELDLDPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVP 127

Query: 126 LLKEAGALWL 127
           LLKEAGALWL
Sbjct: 128 LLKEAGALWL 135

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy Swiss-Prot
Match: Q96305 (Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-33
Identity = 83/137 (60.58%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 2   MHYQAERSWDYYMPAT--------AARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLL 61
           M YQ E SW  Y  ++         A   + R+  LA+ SAVVIFSVS+CCMCHA+K L 
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 62  CGMGVSSTVYELDHDPRGKEIERALMRLV---GAASP-PVPVVFIGGKLVGSMDRVMASH 121
            GMGVS  V+ELD  P G +I+RAL+RL+   G++SP  +PVVFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 122 INGSLVPLLKEAGALWL 127
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy Swiss-Prot
Match: Q0IMV4 (Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC14 PE=3 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-33
Identity = 65/104 (62.50%), Postives = 87/104 (83.65%), Query Frame = 0


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +DRV++LA+  AVVIF++SSCCMCH + RL C +GV++ V+ELD DPRGKE+ERAL++L+
Sbjct: 1   MDRVMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQDPRGKEMERALLKLL 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
           G   PPVPVVFIGGKLVG  +++M+ H+ G L+P+LK AGALWL
Sbjct: 61  G-RGPPVPVVFIGGKLVGGTNKIMSLHLGGELIPMLKNAGALWL 103

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy Swiss-Prot
Match: Q7G8Y5 (Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.9e-33
Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +DRV RLAA  AVVIFS+SSCCMCH + RL C +GV+ TV ELD DPRGKE+E+AL RL+
Sbjct: 1   MDRVNRLAAQRAVVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLL 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
           G  SP VP VFIGG+LVGS D+VM+ H++G+LVPLL+ AGALW+
Sbjct: 61  G-RSPAVPAVFIGGRLVGSTDKVMSLHLSGNLVPLLRNAGALWV 103

[Close]

BLAST of Cp4.1LG12g09960 vs. NCBI nr
Match: XP_022953384.1 (glutaredoxin-C3-like [Cucurbita moschata] >XP_023548380.1 glutaredoxin-C3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256 bits (653), Expect = 7.42e-86
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60
           MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS
Sbjct: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60

Query: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120
           TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE
Sbjct: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120

Query: 121 AGALWL 126
           AGALWL
Sbjct: 121 AGALWL 126

[Close]

BLAST of Cp4.1LG12g09960 vs. NCBI nr
Match: XP_022991381.1 (glutaredoxin-C3-like [Cucurbita maxima])

HSP 1 Score: 254 bits (649), Expect = 3.02e-85
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60
           MMHYQAERSW+YYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS
Sbjct: 1   MMHYQAERSWEYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60

Query: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120
           TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE
Sbjct: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120

Query: 121 AGALWL 126
           AGALWL
Sbjct: 121 AGALWL 126

[Close]

BLAST of Cp4.1LG12g09960 vs. NCBI nr
Match: KAG6576116.1 (Glutaredoxin-C3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254 bits (648), Expect = 4.15e-85
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 2   MHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSST 61
           MHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSST
Sbjct: 1   MHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSST 60

Query: 62  VYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEA 121
           VYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEA
Sbjct: 61  VYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEA 120

Query: 122 GALWL 126
           GALWL
Sbjct: 121 GALWL 125

[Close]

BLAST of Cp4.1LG12g09960 vs. NCBI nr
Match: XP_022960351.1 (glutaredoxin-C1-like [Cucurbita moschata] >XP_023513924.1 glutaredoxin-C1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240 bits (613), Expect = 9.37e-80
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60
           MMHYQAERSW+YYMP TAARDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGVS 
Sbjct: 1   MMHYQAERSWEYYMPPTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSP 60

Query: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120
           TVYELDHDPRGKEIERALMRLVG  +PPVPVVFIGGKLVGSMDRVMASHING+LVPLLKE
Sbjct: 61  TVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKE 120

Query: 121 AGALWL 126
           AGALWL
Sbjct: 121 AGALWL 126

[Close]

BLAST of Cp4.1LG12g09960 vs. NCBI nr
Match: XP_038875997.1 (glutaredoxin-C1-like [Benincasa hispida])

HSP 1 Score: 239 bits (610), Expect = 2.97e-79
Identity = 120/129 (93.02%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAA---RDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMG 60
           MM YQAERSW+YYMPATAA   RDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMG
Sbjct: 1   MMRYQAERSWEYYMPATAAAAARDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMG 60

Query: 61  VSSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPL 120
           VS TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHING+LVPL
Sbjct: 61  VSPTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGTLVPL 120

Query: 121 LKEAGALWL 126
           LKEAGALWL
Sbjct: 121 LKEAGALWL 129

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy TrEMBL
Match: A0A6J1GPH7 (glutaredoxin-C3-like OS=Cucurbita moschata OX=3662 GN=LOC111455953 PE=3 SV=1)

HSP 1 Score: 256 bits (653), Expect = 3.59e-86
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60
           MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS
Sbjct: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60

Query: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120
           TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE
Sbjct: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120

Query: 121 AGALWL 126
           AGALWL
Sbjct: 121 AGALWL 126

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy TrEMBL
Match: A0A6J1JQK3 (glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111488032 PE=3 SV=1)

HSP 1 Score: 254 bits (649), Expect = 1.46e-85
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60
           MMHYQAERSW+YYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS
Sbjct: 1   MMHYQAERSWEYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60

Query: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120
           TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE
Sbjct: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120

Query: 121 AGALWL 126
           AGALWL
Sbjct: 121 AGALWL 126

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy TrEMBL
Match: A0A6J1H7D3 (glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111461103 PE=3 SV=1)

HSP 1 Score: 240 bits (613), Expect = 4.54e-80
Identity = 117/126 (92.86%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSS 60
           MMHYQAERSW+YYMP TAARDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGVS 
Sbjct: 1   MMHYQAERSWEYYMPPTAARDPVDRVLRLAAESAVVIFSVSSCCMCHALKRLLCGMGVSP 60

Query: 61  TVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKE 120
           TVYELDHDPRGKEIERALMRLVG  +PPVPVVFIGGKLVGSMDRVMASHING+LVPLLKE
Sbjct: 61  TVYELDHDPRGKEIERALMRLVGPTAPPVPVVFIGGKLVGSMDRVMASHINGTLVPLLKE 120

Query: 121 AGALWL 126
           AGALWL
Sbjct: 121 AGALWL 126

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy TrEMBL
Match: U3RGD6 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX7 PE=2 SV=1)

HSP 1 Score: 237 bits (605), Expect = 8.05e-79
Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMPATAA--RDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSW+YYMP TA+  RDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVTASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           S TVYELDHDPRGK+IERALMRLVGA SPPVPVVFIGGKLVGSMDRVMASHING+LVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 126
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of Cp4.1LG12g09960 vs. ExPASy TrEMBL
Match: A0A5D3DM35 (Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002110 PE=3 SV=1)

HSP 1 Score: 237 bits (605), Expect = 8.05e-79
Identity = 117/128 (91.41%), Postives = 123/128 (96.09%), Query Frame = 0


Query: 1   MMHYQAERSWDYYMP--ATAARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGV 60
           MMHYQAERSW+YYMP  A+A+RDPVDRV+RLAA SAVVIFSVSSCCMCHALKRLLCGMGV
Sbjct: 1   MMHYQAERSWEYYMPVSASASRDPVDRVIRLAAESAVVIFSVSSCCMCHALKRLLCGMGV 60

Query: 61  SSTVYELDHDPRGKEIERALMRLVGAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLL 120
           S TVYELDHDPRGK+IERALMRLVGA SPPVPVVFIGGKLVGSMDRVMASHING+LVPLL
Sbjct: 61  SPTVYELDHDPRGKDIERALMRLVGATSPPVPVVFIGGKLVGSMDRVMASHINGTLVPLL 120

Query: 121 KEAGALWL 126
           KEAGALWL
Sbjct: 121 KEAGALWL 128

[Close]

BLAST of Cp4.1LG12g09960 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-34
Identity = 83/137 (60.58%), Postives = 100/137 (72.99%), Query Frame = 0


Query: 2   MHYQAERSWDYYMPAT--------AARDPVDRVVRLAAGSAVVIFSVSSCCMCHALKRLL 61
           M YQ E SW  Y  ++         A   + R+  LA+ SAVVIFSVS+CCMCHA+K L 
Sbjct: 1   MQYQTE-SWGSYKMSSLGFGGLGMVADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLF 60

Query: 62  CGMGVSSTVYELDHDPRGKEIERALMRLV---GAASP-PVPVVFIGGKLVGSMDRVMASH 121
            GMGVS  V+ELD  P G +I+RAL+RL+   G++SP  +PVVFIGGKLVG+MDRVMASH
Sbjct: 61  RGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASH 120

Query: 122 INGSLVPLLKEAGALWL 127
           INGSLVPLLK+AGALWL
Sbjct: 121 INGSLVPLLKDAGALWL 136

[Close]

BLAST of Cp4.1LG12g09960 vs. TAIR 10
Match: AT5G14070.1 (Thioredoxin superfamily protein )

HSP 1 Score: 139.8 bits (351), Expect = 1.5e-33
Identity = 74/108 (68.52%), Postives = 88/108 (81.48%), Query Frame = 0


Query: 25  RVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV-- 84
           ++  +AA +AVVIFSVS+CCMCHA+KRL  GMGVS  V+ELD  P G EI RAL+RL+  
Sbjct: 33  KIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGC 92

Query: 85  ---GAASP-PVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              GA SP  +PVVFIGGK+VG+M+RVMASHINGSLVPLLK+AGALWL
Sbjct: 93  SSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGALWL 140

[Close]

BLAST of Cp4.1LG12g09960 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 4.6e-27
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +D + ++     VVI+S SSCCM H +K LLC  G +  VYELD   RG+EIE+AL+RL 
Sbjct: 1   MDMITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRL- 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              SP VP VFIGG+LVG  + VM+ H+NGSL+P+LK AGALW+
Sbjct: 61  -GCSPAVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

[Close]

BLAST of Cp4.1LG12g09960 vs. TAIR 10
Match: AT3G21460.1 (Glutaredoxin family protein )

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-26
Identity = 62/104 (59.62%), Postives = 73/104 (70.19%), Query Frame = 0


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           +D V RLA+  AVVIFS S+CCM HA+KRL    GVS  + E+D D  GK+IE AL RL 
Sbjct: 1   MDVVARLASQRAVVIFSKSTCCMSHAIKRLFYEQGVSPAIVEIDQDMYGKDIEWALARL- 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              SP VP VF+GGK VG+ + VM  H+NGSL  LLKEAGALWL
Sbjct: 61  -GCSPTVPAVFVGGKFVGTANTVMTLHLNGSLKILLKEAGALWL 102

[Close]

BLAST of Cp4.1LG12g09960 vs. TAIR 10
Match: AT4G15700.1 (Thioredoxin superfamily protein )

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-26
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 23  VDRVVRLAAGSAVVIFSVSSCCMCHALKRLLCGMGVSSTVYELDHDPRGKEIERALMRLV 82
           ++ + ++ +  +VVIFS +SCCM H +K L   +GV+ T+YELD   RGKEIE AL +L 
Sbjct: 1   MENLQKMISEKSVVIFSKNSCCMSHTIKTLFLDLGVNPTIYELDEISRGKEIEHALAQL- 60

Query: 83  GAASPPVPVVFIGGKLVGSMDRVMASHINGSLVPLLKEAGALWL 127
              SP VPVVFIGG+LVG  ++VM+ H+N SLVP+LK AGALWL
Sbjct: 61  -GCSPTVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGALWL 102

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6K609	2.6e-43	71.11	Glutaredoxin-C3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC3 PE=2 SV=1	[more]
Q0JDM4	8.5e-42	70.00	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q96305	1.5e-33	60.58	Glutaredoxin-C7 OS=Arabidopsis thaliana OX=3702 GN=GRXC7 PE=1 SV=2	[more]
Q0IMV4	1.9e-33	62.50	Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC14 PE=...	[more]
Q7G8Y5	1.9e-33	67.31	Glutaredoxin-C1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC1 PE=3 SV=1	[more]

BLAST of Cp4.1LG12g09960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953384.1	7.42e-86	100.00	glutaredoxin-C3-like [Cucurbita moschata] >XP_023548380.1 glutaredoxin-C3-like [...	[more]
XP_022991381.1	3.02e-85	99.21	glutaredoxin-C3-like [Cucurbita maxima]	[more]
KAG6576116.1	4.15e-85	100.00	Glutaredoxin-C3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022960351.1	9.37e-80	92.86	glutaredoxin-C1-like [Cucurbita moschata] >XP_023513924.1 glutaredoxin-C1-like [...	[more]
XP_038875997.1	2.97e-79	93.02	glutaredoxin-C1-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g09960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPH7	3.59e-86	100.00	glutaredoxin-C3-like OS=Cucurbita moschata OX=3662 GN=LOC111455953 PE=3 SV=1	[more]
A0A6J1JQK3	1.46e-85	99.21	glutaredoxin-C3-like OS=Cucurbita maxima OX=3661 GN=LOC111488032 PE=3 SV=1	[more]
A0A6J1H7D3	4.54e-80	92.86	glutaredoxin-C1-like OS=Cucurbita moschata OX=3662 GN=LOC111461103 PE=3 SV=1	[more]
U3RGD6	8.05e-79	91.41	Glutaredoxin OS=Cucumis sativus OX=3659 GN=GRX7 PE=2 SV=1	[more]
A0A5D3DM35	8.05e-79	91.41	Glutaredoxin-C1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266...	[more]

BLAST of Cp4.1LG12g09960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02000.1	1.0e-34	60.58	Thioredoxin superfamily protein	[more]
AT5G14070.1	1.5e-33	68.52	Thioredoxin superfamily protein	[more]
AT5G18600.1	4.6e-27	54.81	Thioredoxin superfamily protein	[more]
AT3G21460.1	1.8e-26	59.62	Glutaredoxin family protein	[more]
AT4G15700.1	3.9e-26	54.81	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 35..99 e-value: 5.9E-13 score: 48.8
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 19..125 e-value: 9.6E-28 score: 98.1
None	No IPR available	PANTHER	PTHR10168:SF215	GLUTAREDOXIN-C5	coord: 5..125
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 23..125 score: 21.404879
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 34..117 e-value: 1.60208E-36 score: 117.641
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 26..126 e-value: 1.0E-40 score: 135.6
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 5..125
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 23..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09960.1	Cp4.1LG12g09960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity