Cp4.1LG12g09800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	p-loop containing nucleoside triphosphate hydrolases superfamily protein, putative
Location	Cp4.1LG12: 5432450 .. 5435561 (-)
RNA-Seq Expression	Cp4.1LG12g09800
Synteny	Cp4.1LG12g09800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGATATGAAAGAACAATTTTAGGGTGCGATACGGTGTTTCCATTTCTTCCATTTTCTTTCGTTTCGTTTCCCGCGCCCACAACCGCGGAGTGAGACTGAGAAAGCGACTGATTTTTTATCGTGCAATCTCATCTTCCCACAGTCGCCGGCACCGGCAACGGCGCACCGGTACCGTCACCGTCACCATCACCTGACTCCCTCACTGGGCTTTGTTGATCAACGGACTTTTATTTTGTTTTCAATCTGAACTTGTGTCTGCGGTTTCCATTTTCTGGCCATCCAGGAACAAGATTAACCAACCGAGAACAAGACCCTCTTTCCGAATCCCTATCATCCACCGCAATGGATTCCCTTCTCAACTTGCTTCCCACTTTCTTATCCTAATCCCACTTCCACACCCCGTCTCCGGTCAATGACTTCGATGGCGCTTACGAAGACACAACTATTGGCCCGCTGGCGAAGCATCGAGGAAGAAGACGATACCGGCCATGGCTCACACCTACAACCTCATCGTTTTAACCAGCTTAAAGAGGAATGGTATGTCTTTGCCTCTCATCCACCTGCCCAACTCTGCCTTTCCTCTTTAACTCACTGCAAATGTTGCCAGAACAGGACTCTAATTATCCCATTGACATTTTTGCGGCATCATTAGTATTAAGTTACATATTGCAATTTTGCTATTTTCTGTGTTTTCTCAAGTATAGAATGTTTCGCGTCTTTTCAAGTTAAGTTGCTCTACTTTGTTCTTGTTCTGTCAGGTTCGCAGATGCCTTCACTTTTTTGATTAGTTTGCCCCACGAAAATCACATTTGGTGTGGCTCTTGGGAAGTAATGGGGCCTCTTCTGGAAACATTTTACAATTATTTCAAAGATGAAAGCCATGACTCTCCTCTCAGGCGCCTATGGAAGAGGATCTCTATGGAGATGCAGCACTGTATACAGTGCATCTGCCAGCATCATGAAGCCAAAGATATGTATAGTTTGGAGTACGAGTTGAGTTCTATTGGACCCCTTCTTGATGTATTGAGAAGACTTGACGAGGAAAGGGTCACTCAGTACTTGAGAAATATCAATCACAGAATATCCCAGAATGAATATGATGCTGCACAGGATAATACTGAAGTTGTCAGTATCGTATATGAGGTTTGTCAATTTCTGGCCCCATCCCCATCCCCACCCTCTATTACCTATTTTTCTAACACACATCTCAGTGATAGCTTCTCACTTTCAATATTTTCCTTGTTACTTCTGACTTGATATACAATTTCAAATGCTGATACATTTTTAGGGAGAAATAGCAAAATTTTGTAGGCAGATTGAGAGATTTTAAGAAGAGGTTTGAGAGGTAGCCAGGTTTAATACATCCTTATGGGCGTTTGTTATCTGATCATTTTGTAATTATGAGCTTCGTTTAATTCATTTGTCTATTTGGACTCTTTTTTTGTAGATTTTTTTTATGCCCTTGTGCATTCGTTCATATCTATTAATGAAAGTTTGGTTGCTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGCTGATATATTTTTTGGATTTAATCTTTGGTTTCATGAATTGTTTGGCTGGTTGAGAAGGCATTCTGTAAATGGTATCTACTGACGGTTTCTTGTGTCCATTGCAAATTTACATGGTGTGGGTATTGGAGGATGCTGAAGACTCTTGTTATCTTCTCTATCACCTTCATTTGCTAAGGTTTCTTTGCGATAATGTTTGCTACATAAAGATTCTTGTCGAGACATCTAAGGAATATCTATACTTGTTTCATATTGTATCATTACTACATGGATACATGCTGTTGTAATCGTTTCTCGTTGTAATATTTGCAAATGTATGATTGGAAAGTTGCAATCCTTCCACAATATTACGCAGTCGTATCCACACGTGTAGTGACTGCACAAGTTTTGGTCTTATTAACAGGTTCTGATGTTTCCTGTCCTTCTGGAGGATCAATTGCTGTTCACTGAATTTGGGAAGTTTATCGAATCTGTAGATGATATTCATGAACTTGCTTTGGATGGTCAGCAACAGTTTCCGGTACTAAAGAGGAATACCTAATGATTTTGTCCTTTATTTTTTTAACAAGAAATATTCTCTTTATGATTCTTATTTTGTGCACATTGTCTGTCAGGGTGTGTATGCCCTATTCTTTTTCAGTAGAAGAGTGCGTTCTGTAGGACATCGCTTATCTGCAGCAATGGGTAAACTGAGGTACCTTTCACCAAGACTTAGTCATCCATCTGTTTAACCGTGTGAAATCTATTACCAATCCTATTATTTTGTTGATGATTACTACTGTCATTCGGTAAAAACCTAATATCAGTTATTGTTGTTTATTGATGTTAGAGTAGAGTACTTCATCCAAACATGAAAGATTTTGTACAGTGAGCACAATTCATAAATCTTCATCTTGCGATCTGTGTTAACATGAGTTTGTTGGTCTTGCTCCTGCTGCAAGCAAAGTTGACCCAAAAGATCGCGCTGATACCAAATTGGAGTAGCTTAAGGGACAAAGGAGAGTTTTTCCACAAAAAGTTTGATTATTAAAGCATCTTTATTATGACTGAAGTGTAATGGGTGCAAGAGAGTAATTCCCTTTTTATAGAGAATTTAAAGTAAATTAAGAACTAAAATCTAGAAAGGAAATTTGAAAACATTAACCAAGGAATTACTAAAGATGAACTACTAATCAAGAGAGCTGCAAGGCTGAAGATAGAAGCTTTTTCTAGAGAAAATCAATCATATTAAGATAGCCATTAAGCACGATCCATGCCAAGACACTGAATTTTCTCAACTCATAAAAGTCAATCATATTAAGGTGGCCATTAAGATATTATTTTATATTACATAAAGACTAATTTATATAGGGGAGGAAACAAGACACAGACCTACACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTCATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAGTTGGGAAGGTATTTTGTAAACATCATGGATTATACATCCCTCTTGTAAATTTCACTCATCAATGAATTTGTCTCTTATCAAAAAAAAAAAAAAAAAAGAAAAA

mRNA sequence

TAAGATATGAAAGAACAATTTTAGGGTGCGATACGGTGTTTCCATTTCTTCCATTTTCTTTCGTTTCGTTTCCCGCGCCCACAACCGCGGAGTGAGACTGAGAAAGCGACTGATTTTTTATCGTGCAATCTCATCTTCCCACAGTCGCCGGCACCGGCAACGGCGCACCGGTACCGTCACCGTCACCATCACCTGACTCCCTCACTGGGCTTTGTTGATCAACGGACTTTTATTTTGTTTTCAATCTGAACTTGTGTCTGCGGTTTCCATTTTCTGGCCATCCAGGAACAAGATTAACCAACCGAGAACAAGACCCTCTTTCCGAATCCCTATCATCCACCGCAATGGATTCCCTTCTCAACTTGCTTCCCACTTTCTTATCCTAATCCCACTTCCACACCCCGTCTCCGGTCAATGACTTCGATGGCGCTTACGAAGACACAACTATTGGCCCGCTGGCGAAGCATCGAGGAAGAAGACGATACCGGCCATGGCTCACACCTACAACCTCATCGTTTTAACCAGCTTAAAGAGGAATGGTTCGCAGATGCCTTCACTTTTTTGATTAGTTTGCCCCACGAAAATCACATTTGGTGTGGCTCTTGGGAAGTAATGGGGCCTCTTCTGGAAACATTTTACAATTATTTCAAAGATGAAAGCCATGACTCTCCTCTCAGGCGCCTATGGAAGAGGATCTCTATGGAGATGCAGCACTGTATACAGTGCATCTGCCAGCATCATGAAGCCAAAGATATGTATAGTTTGGAGTACGAGTTGAGTTCTATTGGACCCCTTCTTGATGTATTGAGAAGACTTGACGAGGAAAGGGTCACTCAGTACTTGAGAAATATCAATCACAGAATATCCCAGAATGAATATGATGCTGCACAGGATAATACTGAAGTTGTCAGTATCGTATATGAGGTTCTGATGTTTCCTGTCCTTCTGGAGGATCAATTGCTGTTCACTGAATTTGGGAAGTTTATCGAATCTGTAGATGATATTCATGAACTTGCTTTGGATGGTCAGCAACAGTTTCCGGGTGTGTATGCCCTATTCTTTTTCAGTAGAAGAGTGCGTTCTGTAGGACATCGCTTATCTGCAGCAATGGGTAAACTGAGGTACCTTTCACCAAGACTTAGTCATCCATCTGTTTAACCGTGTGAAATCTATTACCAATCCTATTATTTTGTTGATGATTACTACTGTCATTCGGTAAAAACCTAATATCAGTTATTGTTGTTTATTGATGTTAGAGTAGAGTACTTCATCCAAACATGAAAGATTTTGTACAGTGAGCACAATTCATAAATCTTCATCTTGCGATCTGTGTTAACATGAGTTTGTTGGTCTTGCTCCTGCTGCAAGCAAAGTTGACCCAAAAGATCGCGCTGATACCAAATTGGAGTAGCTTAAGGGACAAAGGAGAGTTTTTCCACAAAAAGTTTGATTATTAAAGCATCTTTATTATGACTGAAGTGTAATGGGTGCAAGAGAGTAATTCCCTTTTTATAGAGAATTTAAAGTAAATTAAGAACTAAAATCTAGAAAGGAAATTTGAAAACATTAACCAAGGAATTACTAAAGATGAACTACTAATCAAGAGAGCTGCAAGGCTGAAGATAGAAGCTTTTTCTAGAGAAAATCAATCATATTAAGATAGCCATTAAGCACGATCCATGCCAAGACACTGAATTTTCTCAACTCATAAAAGTCAATCATATTAAGGTGGCCATTAAGATATTATTTTATATTACATAAAGACTAATTTATATAGGGGAGGAAACAAGACACAGACCTACACAAAACTTTTCGACAATGTTGTTTACCAAGCTATATCTTGGTGTAAACTGTCTCATATTTTTACTTCCTATAGTTATACCTCCCTCATTGCAAGTTGGGAAGGTATTTTGTAAACATCATGGATTATACATCCCTCTTGTAAATTTCACTCATCAATGAATTTGTCTCTTATCAAAAAAAAAAAAAAAAAAGAAAAA

Coding sequence (CDS)

ATGACTTCGATGGCGCTTACGAAGACACAACTATTGGCCCGCTGGCGAAGCATCGAGGAAGAAGACGATACCGGCCATGGCTCACACCTACAACCTCATCGTTTTAACCAGCTTAAAGAGGAATGGTTCGCAGATGCCTTCACTTTTTTGATTAGTTTGCCCCACGAAAATCACATTTGGTGTGGCTCTTGGGAAGTAATGGGGCCTCTTCTGGAAACATTTTACAATTATTTCAAAGATGAAAGCCATGACTCTCCTCTCAGGCGCCTATGGAAGAGGATCTCTATGGAGATGCAGCACTGTATACAGTGCATCTGCCAGCATCATGAAGCCAAAGATATGTATAGTTTGGAGTACGAGTTGAGTTCTATTGGACCCCTTCTTGATGTATTGAGAAGACTTGACGAGGAAAGGGTCACTCAGTACTTGAGAAATATCAATCACAGAATATCCCAGAATGAATATGATGCTGCACAGGATAATACTGAAGTTGTCAGTATCGTATATGAGGTTCTGATGTTTCCTGTCCTTCTGGAGGATCAATTGCTGTTCACTGAATTTGGGAAGTTTATCGAATCTGTAGATGATATTCATGAACTTGCTTTGGATGGTCAGCAACAGTTTCCGGGTGTGTATGCCCTATTCTTTTTCAGTAGAAGAGTGCGTTCTGTAGGACATCGCTTATCTGCAGCAATGGGTAAACTGAGGTACCTTTCACCAAGACTTAGTCATCCATCTGTTTAA

Protein sequence

MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIWCGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYELSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLEDQLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLRYLSPRLSHPSV

Homology

[Close]

BLAST of Cp4.1LG12g09800 vs. NCBI nr
Match: XP_023547842.1 (uncharacterized protein LOC111806683 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 493 bits (1268), Expect = 4.30e-157
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW
Sbjct: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE
Sbjct: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR
Sbjct: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. NCBI nr
Match: KAG6575386.1 (hypothetical protein SDJN03_26025, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 487 bits (1254), Expect = 3.69e-155
Identity = 233/236 (98.73%), Postives = 235/236 (99.58%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLP +NHIW
Sbjct: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPQDNHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE
Sbjct: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           QLLFTEFGKFIE+VDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR
Sbjct: 181 QLLFTEFGKFIETVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. NCBI nr
Match: XP_022992045.1 (uncharacterized protein LOC111488514 isoform X1 [Cucurbita maxima])

HSP 1 Score: 483 bits (1244), Expect = 8.83e-154
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMALTKTQLLARWRSIEEEDD GHGS LQPHRFNQLKEEWFADAFTFLISLP +NHIW
Sbjct: 1   MTSMALTKTQLLARWRSIEEEDDNGHGSQLQPHRFNQLKEEWFADAFTFLISLPQDNHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE
Sbjct: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR
Sbjct: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. NCBI nr
Match: XP_022953568.1 (uncharacterized protein LOC111456069 isoform X1 [Cucurbita moschata])

HSP 1 Score: 478 bits (1230), Expect = 7.48e-152
Identity = 229/236 (97.03%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMALTKTQLLARWRSIEEEDD+GHGS LQP RFNQLKEEWFADAFTFLISLP +NHIW
Sbjct: 1   MTSMALTKTQLLARWRSIEEEDDSGHGSQLQPDRFNQLKEEWFADAFTFLISLPQDNHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE
Sbjct: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           QLLFTEFGKFIE+VDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSA+MGKLR
Sbjct: 181 QLLFTEFGKFIETVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSASMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. NCBI nr
Match: XP_016902853.1 (PREDICTED: uncharacterized protein LOC103500612 isoform X4 [Cucumis melo])

HSP 1 Score: 454 bits (1167), Expect = 4.23e-144
Identity = 210/236 (88.98%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMA TKTQLLARWR+IEEED+TGHG+H+QPHRF QLKEEWFADAFT+LISLP E+HIW
Sbjct: 1   MTSMASTKTQLLARWRAIEEEDETGHGTHMQPHRFQQLKEEWFADAFTYLISLPQESHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSW++MGPLLETFYNYFKDESHDSPLRRLWKRISMEM  CIQC+CQHH+AKDMYS EYE
Sbjct: 61  CGSWDIMGPLLETFYNYFKDESHDSPLRRLWKRISMEMNQCIQCVCQHHQAKDMYSSEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQ EYDAAQDN+EVVS+VYEVLMFPVLL+D
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQGEYDAAQDNSEVVSVVYEVLMFPVLLDD 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           Q LFTEFGKFIESVDD+HELALDGQQQFPG YALFFF+RRVRSVGHRL+A+MGKLR
Sbjct: 181 QSLFTEFGKFIESVDDVHELALDGQQQFPGAYALFFFNRRVRSVGHRLAASMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. ExPASy TrEMBL
Match: A0A6J1JUM0 (uncharacterized protein LOC111488514 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488514 PE=4 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 4.28e-154
Identity = 232/236 (98.31%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMALTKTQLLARWRSIEEEDD GHGS LQPHRFNQLKEEWFADAFTFLISLP +NHIW
Sbjct: 1   MTSMALTKTQLLARWRSIEEEDDNGHGSQLQPHRFNQLKEEWFADAFTFLISLPQDNHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE
Sbjct: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR
Sbjct: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. ExPASy TrEMBL
Match: A0A6J1GNN5 (uncharacterized protein LOC111456069 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456069 PE=4 SV=1)

HSP 1 Score: 478 bits (1230), Expect = 3.62e-152
Identity = 229/236 (97.03%), Postives = 233/236 (98.73%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMALTKTQLLARWRSIEEEDD+GHGS LQP RFNQLKEEWFADAFTFLISLP +NHIW
Sbjct: 1   MTSMALTKTQLLARWRSIEEEDDSGHGSQLQPDRFNQLKEEWFADAFTFLISLPQDNHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE
Sbjct: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           QLLFTEFGKFIE+VDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSA+MGKLR
Sbjct: 181 QLLFTEFGKFIETVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSASMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. ExPASy TrEMBL
Match: A0A1S4E3P9 (uncharacterized protein LOC103500612 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103500612 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 2.05e-144
Identity = 210/236 (88.98%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMA TKTQLLARWR+IEEED+TGHG+H+QPHRF QLKEEWFADAFT+LISLP E+HIW
Sbjct: 1   MTSMASTKTQLLARWRAIEEEDETGHGTHMQPHRFQQLKEEWFADAFTYLISLPQESHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSW++MGPLLETFYNYFKDESHDSPLRRLWKRISMEM  CIQC+CQHH+AKDMYS EYE
Sbjct: 61  CGSWDIMGPLLETFYNYFKDESHDSPLRRLWKRISMEMNQCIQCVCQHHQAKDMYSSEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQ EYDAAQDN+EVVS+VYEVLMFPVLL+D
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQGEYDAAQDNSEVVSVVYEVLMFPVLLDD 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           Q LFTEFGKFIESVDD+HELALDGQQQFPG YALFFF+RRVRSVGHRL+A+MGKLR
Sbjct: 181 QSLFTEFGKFIESVDDVHELALDGQQQFPGAYALFFFNRRVRSVGHRLAASMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. ExPASy TrEMBL
Match: A0A5A7V0K3 (Helicase SEN1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00530 PE=4 SV=1)

HSP 1 Score: 454 bits (1168), Expect = 1.31e-143
Identity = 211/236 (89.41%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMA TKTQLLARWR+IEEED+TGHG+H+QPHRF QLKEEWFADAFT+LISLP E+HIW
Sbjct: 1   MTSMASTKTQLLARWRAIEEEDETGHGTHMQPHRFQQLKEEWFADAFTYLISLPQESHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSW++MGPLLETFYNYFKDESHDSPLRRLWKRISMEM  CIQC+CQHH+AKDMYS EYE
Sbjct: 61  CGSWDIMGPLLETFYNYFKDESHDSPLRRLWKRISMEMNQCIQCVCQHHQAKDMYSSEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQ EYDAAQDN+EVVS+VYEVLMFPVLL+D
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQGEYDAAQDNSEVVSVVYEVLMFPVLLDD 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           Q LFTEFGKFIESVDDIHELALDGQQQFPG YALFFF+RRVRSVGHRL+A+MGKLR
Sbjct: 181 QSLFTEFGKFIESVDDIHELALDGQQQFPGAYALFFFNRRVRSVGHRLAASMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. ExPASy TrEMBL
Match: A0A1S3CGD9 (uncharacterized protein LOC103500612 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500612 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 1.76e-143
Identity = 210/236 (88.98%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQPHRFNQLKEEWFADAFTFLISLPHENHIW 60
           MTSMA TKTQLLARWR+IEEED+TGHG+H+QPHRF QLKEEWFADAFT+LISLP E+HIW
Sbjct: 1   MTSMASTKTQLLARWRAIEEEDETGHGTHMQPHRFQQLKEEWFADAFTYLISLPQESHIW 60

Query: 61  CGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEYE 120
           CGSW++MGPLLETFYNYFKDESHDSPLRRLWKRISMEM  CIQC+CQHH+AKDMYS EYE
Sbjct: 61  CGSWDIMGPLLETFYNYFKDESHDSPLRRLWKRISMEMNQCIQCVCQHHQAKDMYSSEYE 120

Query: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLED 180
           LSSIGPLLDVLRRLDEERVTQYLRNINHRISQ EYDAAQDN+EVVS+VYEVLMFPVLL+D
Sbjct: 121 LSSIGPLLDVLRRLDEERVTQYLRNINHRISQGEYDAAQDNSEVVSVVYEVLMFPVLLDD 180

Query: 181 QLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 236
           Q LFTEFGKFIESVDD+HELALDGQQQFPG YALFFF+RRVRSVGHRL+A+MGKLR
Sbjct: 181 QSLFTEFGKFIESVDDVHELALDGQQQFPGAYALFFFNRRVRSVGHRLAASMGKLR 236

[Close]

BLAST of Cp4.1LG12g09800 vs. TAIR 10
Match: AT1G16800.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 6.0e-79
Identity = 141/237 (59.49%), Postives = 174/237 (73.42%), Query Frame = 0


Query: 1   MTSMALTKTQLLARWRSIEEEDDTGHGSHLQP-HRFNQLKEEWFADAFTFLISLPHENHI 60
           M S      +LL RWR IEE+++    S      R NQ KE+WF DAFT LISLP + HI
Sbjct: 1   MLSKVSPSGELLNRWRRIEEDEEENDDSDPSAVRRLNQRKEQWFTDAFTLLISLPKDTHI 60

Query: 61  WCGSWEVMGPLLETFYNYFKDESHDSPLRRLWKRISMEMQHCIQCICQHHEAKDMYSLEY 120
           WCG  ++MGPL+ETFYNYFKD+  DSPL+ LWKRIS EM+ C QCICQHH+ ++MY  EY
Sbjct: 61  WCGHGDIMGPLIETFYNYFKDDRVDSPLKVLWKRISEEMRLCAQCICQHHQTQEMYEKEY 120

Query: 121 ELSSIGPLLDVLRRLDEERVTQYLRNINHRISQNEYDAAQDNTEVVSIVYEVLMFPVLLE 180
           E SS+GPLL VLR+LDEERVT++L+ IN +I +  YD    + EVVS++YEVLMFP   +
Sbjct: 121 ECSSVGPLLVVLRKLDEERVTRHLQEINLKIEKGTYDPDHHHAEVVSVMYEVLMFPFFFD 180

Query: 181 DQLLFTEFGKFIESVDDIHELALDGQQQFPGVYALFFFSRRVRSVGHRLSAAMGKLR 237
           D  L TEF KFIES+D+IHELA    Q+FPGVYAL F +RRVR +G+RL+ AMGKLR
Sbjct: 181 DMSLCTEFEKFIESIDNIHELAFAENQEFPGVYALLFLNRRVRVIGYRLARAMGKLR 237

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09800 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g09800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547842.1	4.30e-157	100.00	uncharacterized protein LOC111806683 isoform X4 [Cucurbita pepo subsp. pepo]	[more]
KAG6575386.1	3.69e-155	98.73	hypothetical protein SDJN03_26025, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992045.1	8.83e-154	98.31	uncharacterized protein LOC111488514 isoform X1 [Cucurbita maxima]	[more]
XP_022953568.1	7.48e-152	97.03	uncharacterized protein LOC111456069 isoform X1 [Cucurbita moschata]	[more]
XP_016902853.1	4.23e-144	88.98	PREDICTED: uncharacterized protein LOC103500612 isoform X4 [Cucumis melo]	[more]

BLAST of Cp4.1LG12g09800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JUM0	4.28e-154	98.31	uncharacterized protein LOC111488514 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GNN5	3.62e-152	97.03	uncharacterized protein LOC111456069 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S4E3P9	2.05e-144	88.98	uncharacterized protein LOC103500612 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7V0K3	1.31e-143	89.41	Helicase SEN1 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3CGD9	1.76e-143	88.98	uncharacterized protein LOC103500612 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG12g09800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16800.1	6.0e-79	59.49	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024481	Helicase Sen1, N-terminal	PFAM	PF12726	SEN1_N	coord: 91..217 e-value: 1.3E-7 score: 30.3
IPR045055	DNA2/NAM7-like helicase	PANTHER	PTHR10887	DNA2/NAM7 HELICASE FAMILY	coord: 18..223
None	No IPR available	PANTHER	PTHR10887:SF490	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN	coord: 18..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09800.1	Cp4.1LG12g09800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004386	helicase activity