Cp4.1LG12g09580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09580
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG12: 5595495 .. 5596347 (-)
RNA-Seq Expression	Cp4.1LG12g09580
Synteny	Cp4.1LG12g09580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACCAATTTGCTTAGGGATTAGTGTTTATGTGACAGAGGGAGGAGTTCGTGTACCGACGAAGCCTCTTCTCCATTGGAATTTTGGAACGAGGAGAGCTAGATTGGTAGTGTTTCCAATCAGAGGAAGAAATTGGTGTTTCAGCAGATCCATCGACCTTGCCGCTTCGGATTCTGCTTCTACTCAGATTCTTTCCACTTTGAAGGATCTCTTGACCAAAATTCCATCGTCTTCTTCCTCCAAATCAGACGCTCTCTCCCGCGGCACTGGTAGAAGCAATGCGGAGATTGTTACTGATTTCATCTCTTTCAAGGTCCTCCATATTCTTTTCAGTTTCGTTTCGCTTCTTTGATCTGGTATTCGTTTTGATCGAATCAAACATCGCGACGTCATGGACGTCAGATGAATAAAGCGTGGACTGCTCTTGAGAAGGCTCCTGAAAAATCGTTTAAAAATAAACTTCACGGGTAAAGTCTCGCCAGCGCGATTCTATTAGTCCTATGTCACATTTCTAGTGAAAGCAACTGGATCTCTATTGATTTTTCTGCTTGTAGGATCGGATTGATGCTTTTATCTCGAGTTACGCCGTCTGAGATATTCTTGAAGTCAATAACTAAAGATATCACGAGTGTCGAAATAACATATCGATCGAGGTTTCATCTCTTTTACTTCGTTATTTTAAAAACATTGCTGCTTCTTTATCTACTTGAAATCCATTTCCGATGCCTTTTTCAATACTTAATTATATAAATTGTTACTATTATCACAAATTGTTATGTTACTTCACTGTTTTCTTGCGACATTACAGTTTGAATCCACGGCTAGTTCGCAGGAGGTTACGGCATATTTCTCTC

mRNA sequence

AAACCAATTTGCTTAGGGATTAGTGTTTATGTGACAGAGGGAGGAGTTCGTGTACCGACGAAGCCTCTTCTCCATTGGAATTTTGGAACGAGGAGAGCTAGATTGGTAGTGTTTCCAATCAGAGGAAGAAATTGGTGTTTCAGCAGATCCATCGACCTTGCCGCTTCGGATTCTGCTTCTACTCAGATTCTTTCCACTTTGAAGGATCTCTTGACCAAAATTCCATCGTCTTCTTCCTCCAAATCAGACGCTCTCTCCCGCGGCACTGGTAGAAGCAATGCGGAGATTGTTACTGATTTCATCTCTTTCAAGATGAATAAAGCGTGGACTGCTCTTGAGAAGGCTCCTGAAAAATCGTTTAAAAATAAACTTCACGGTCTCGCCAGCGCGATTCTATTAGTCCTATGTCACATTTCTAGTGAAAGCAACTGGATCTCTATTGATTTTTCTGCTTGTAGGATCGGATTGATGCTTTTATCTCGAGTTACGCCGTCTGAGATATTCTTGAAGTCAATAACTAAAGATATCACGAGTGTCGAAATAACATATCGATCGAGTTTGAATCCACGGCTAGTTCGCAGGAGGTTACGGCATATTTCTCTC

Coding sequence (CDS)

AAACCAATTTGCTTAGGGATTAGTGTTTATGTGACAGAGGGAGGAGTTCGTGTACCGACGAAGCCTCTTCTCCATTGGAATTTTGGAACGAGGAGAGCTAGATTGGTAGTGTTTCCAATCAGAGGAAGAAATTGGTGTTTCAGCAGATCCATCGACCTTGCCGCTTCGGATTCTGCTTCTACTCAGATTCTTTCCACTTTGAAGGATCTCTTGACCAAAATTCCATCGTCTTCTTCCTCCAAATCAGACGCTCTCTCCCGCGGCACTGGTAGAAGCAATGCGGAGATTGTTACTGATTTCATCTCTTTCAAGATGAATAAAGCGTGGACTGCTCTTGAGAAGGCTCCTGAAAAATCGTTTAAAAATAAACTTCACGGTCTCGCCAGCGCGATTCTATTAGTCCTATGTCACATTTCTAGTGAAAGCAACTGGATCTCTATTGATTTTTCTGCTTGTAGGATCGGATTGATGCTTTTATCTCGAGTTACGCCGTCTGAGATATTCTTGAAGTCAATAACTAAAGATATCACGAGTGTCGAAATAACATATCGATCGAGTTTGAATCCACGGCTAGTTCGCAGGAGGTTACGGCATATTTCTCTC

Protein sequence

KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHISL

Homology

[Close]

BLAST of Cp4.1LG12g09580 vs. NCBI nr
Match: XP_023548427.1 (uncharacterized protein LOC111807082 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 322 bits (824), Expect = 1.82e-108
Identity = 174/201 (86.57%), Postives = 174/201 (86.57%), Query Frame = 0


Query: 1   KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 60
           KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS
Sbjct: 34  KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 93

Query: 61  TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF 120
           TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF
Sbjct: 94  TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF 153

Query: 121 KNKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVE 180
           KNKLHG                           IGLMLLSRVTPSEIFLKSITKDITSVE
Sbjct: 154 KNKLHG---------------------------IGLMLLSRVTPSEIFLKSITKDITSVE 207

Query: 181 ITYRSSLNPRLVRRRLRHISL 201
           ITYRSSLNPRLVRRRLRHISL
Sbjct: 214 ITYRSSLNPRLVRRRLRHISL 207

[Close]

BLAST of Cp4.1LG12g09580 vs. NCBI nr
Match: XP_022953932.1 (uncharacterized protein LOC111456340 [Cucurbita moschata])

HSP 1 Score: 306 bits (783), Expect = 3.98e-102
Identity = 166/201 (82.59%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 60
           KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS
Sbjct: 41  KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 100

Query: 61  TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF 120
           +QI STLKDL TKIPSSSSSKSDALSR TGRSNAEI TDFISFKMNKAWTALEKAP+KSF
Sbjct: 101 SQIPSTLKDLWTKIPSSSSSKSDALSRSTGRSNAEIFTDFISFKMNKAWTALEKAPDKSF 160

Query: 121 KNKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVE 180
           KNKLHG                           IGLMLLSRVTPSEIFLKSITKDITSVE
Sbjct: 161 KNKLHG---------------------------IGLMLLSRVTPSEIFLKSITKDITSVE 214

Query: 181 ITYRSSLNPRLVRRRLRHISL 201
           ITY SSLNPRLVRRRLRHI+L
Sbjct: 221 ITYPSSLNPRLVRRRLRHIAL 214

[Close]

BLAST of Cp4.1LG12g09580 vs. NCBI nr
Match: XP_022991797.1 (uncharacterized protein LOC111488336 [Cucurbita maxima])

HSP 1 Score: 297 bits (761), Expect = 1.98e-99
Identity = 163/201 (81.09%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 60
           KPICLGIS YVTEGGVRVPTKPLLHWNFGTRRARLVV PIRGRNWCFSRSIDLAASDS S
Sbjct: 36  KPICLGISDYVTEGGVRVPTKPLLHWNFGTRRARLVVLPIRGRNWCFSRSIDLAASDSDS 95

Query: 61  TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF 120
           TQI STLKDL TKIPSSSSSKSDALSR TGRSNAEIVTDFISFKMNKAWTALEKAP+KSF
Sbjct: 96  TQIPSTLKDLWTKIPSSSSSKSDALSRSTGRSNAEIVTDFISFKMNKAWTALEKAPDKSF 155

Query: 121 KNKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVE 180
           KNKLHG                           IGLMLLSRVTPSEIF KSITKDITSVE
Sbjct: 156 KNKLHG---------------------------IGLMLLSRVTPSEIFFKSITKDITSVE 209

Query: 181 ITYRSSLNPRLVRRRLRHISL 201
           ITY SSLN RLVRRRLRHI+L
Sbjct: 216 ITYPSSLNSRLVRRRLRHIAL 209

[Close]

BLAST of Cp4.1LG12g09580 vs. NCBI nr
Match: KAG6575406.1 (O-fucosyltransferase 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250 bits (638), Expect = 2.04e-74
Identity = 141/184 (76.63%), Postives = 142/184 (77.17%), Query Frame = 0


Query: 2   PICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAST 61
           PICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAST
Sbjct: 541 PICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAST 600

Query: 62  QILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSFK 121
           QI STLKDL TKIPSSSSSKSD LSR TGRSNAEIVTDFISFK          AP+KSFK
Sbjct: 601 QIPSTLKDLWTKIPSSSSSKSDVLSRSTGRSNAEIVTDFISFK----------APDKSFK 660

Query: 122 NKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVEI 181
           NKLHG                           IGLMLLSRVTPSEIFLKSITKDITSVEI
Sbjct: 661 NKLHG---------------------------IGLMLLSRVTPSEIFLKSITKDITSVEI 687

Query: 182 TYRS 185
           TY S
Sbjct: 721 TYPS 687

[Close]

BLAST of Cp4.1LG12g09580 vs. NCBI nr
Match: KAG6593588.1 (hypothetical protein SDJN03_13064, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 215 bits (548), Expect = 1.75e-66
Identity = 124/170 (72.94%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 32  RARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSSKSDALSRGTGR 91
           RARLVVFPIRGRNWCFSRS+D AASDSASTQ  STLKDL TKI S SSSKSDALS  T  
Sbjct: 2   RARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTSS 61

Query: 92  SNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISSESNWISIDFSA 151
           SNAEIVTDFISFKMNKAWTALEKAP+ SFKNKLHG                         
Sbjct: 62  SNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHG------------------------- 121

Query: 152 CRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHISL 201
             IGL LLSRV PSEIFLKSITKD+TSVEI Y SSLNPRLVRRRLRHI+L
Sbjct: 122 --IGLKLLSRVKPSEIFLKSITKDVTSVEIAYPSSLNPRLVRRRLRHIAL 144

[Close]

BLAST of Cp4.1LG12g09580 vs. ExPASy TrEMBL
Match: A0A6J1GPM4 (uncharacterized protein LOC111456340 OS=Cucurbita moschata OX=3662 GN=LOC111456340 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 1.93e-102
Identity = 166/201 (82.59%), Postives = 169/201 (84.08%), Query Frame = 0


Query: 1   KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 60
           KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS
Sbjct: 41  KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 100

Query: 61  TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF 120
           +QI STLKDL TKIPSSSSSKSDALSR TGRSNAEI TDFISFKMNKAWTALEKAP+KSF
Sbjct: 101 SQIPSTLKDLWTKIPSSSSSKSDALSRSTGRSNAEIFTDFISFKMNKAWTALEKAPDKSF 160

Query: 121 KNKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVE 180
           KNKLHG                           IGLMLLSRVTPSEIFLKSITKDITSVE
Sbjct: 161 KNKLHG---------------------------IGLMLLSRVTPSEIFLKSITKDITSVE 214

Query: 181 ITYRSSLNPRLVRRRLRHISL 201
           ITY SSLNPRLVRRRLRHI+L
Sbjct: 221 ITYPSSLNPRLVRRRLRHIAL 214

[Close]

BLAST of Cp4.1LG12g09580 vs. ExPASy TrEMBL
Match: A0A6J1JMV6 (uncharacterized protein LOC111488336 OS=Cucurbita maxima OX=3661 GN=LOC111488336 PE=4 SV=1)

HSP 1 Score: 297 bits (761), Expect = 9.59e-100
Identity = 163/201 (81.09%), Postives = 165/201 (82.09%), Query Frame = 0


Query: 1   KPICLGISVYVTEGGVRVPTKPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSAS 60
           KPICLGIS YVTEGGVRVPTKPLLHWNFGTRRARLVV PIRGRNWCFSRSIDLAASDS S
Sbjct: 36  KPICLGISDYVTEGGVRVPTKPLLHWNFGTRRARLVVLPIRGRNWCFSRSIDLAASDSDS 95

Query: 61  TQILSTLKDLLTKIPSSSSSKSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSF 120
           TQI STLKDL TKIPSSSSSKSDALSR TGRSNAEIVTDFISFKMNKAWTALEKAP+KSF
Sbjct: 96  TQIPSTLKDLWTKIPSSSSSKSDALSRSTGRSNAEIVTDFISFKMNKAWTALEKAPDKSF 155

Query: 121 KNKLHGLASAILLVLCHISSESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVE 180
           KNKLHG                           IGLMLLSRVTPSEIF KSITKDITSVE
Sbjct: 156 KNKLHG---------------------------IGLMLLSRVTPSEIFFKSITKDITSVE 209

Query: 181 ITYRSSLNPRLVRRRLRHISL 201
           ITY SSLN RLVRRRLRHI+L
Sbjct: 216 ITYPSSLNSRLVRRRLRHIAL 209

[Close]

BLAST of Cp4.1LG12g09580 vs. ExPASy TrEMBL
Match: A0A0A0K9A3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447960 PE=4 SV=1)

HSP 1 Score: 221 bits (562), Expect = 1.60e-68
Identity = 125/180 (69.44%), Postives = 131/180 (72.78%), Query Frame = 0


Query: 21  KPLLHWNFGTRRARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSS 80
           K  LHWNFGT RARLVVFPIRGRNWCFSRSI+   SDS+S Q  ST KDL TKI SSSSS
Sbjct: 22  KHFLHWNFGTMRARLVVFPIRGRNWCFSRSIEPTVSDSSSAQTPSTFKDLWTKISSSSSS 81

Query: 81  KSDALSRGTGRSNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISS 140
           KSDALS     +NAEIVTDFIS KMNKAWTALEKAP+ SFKNKLHG              
Sbjct: 82  KSDALSIANASNNAEIVTDFISSKMNKAWTALEKAPDGSFKNKLHG-------------- 141

Query: 141 ESNWISIDFSACRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHIS 200
                        IGL LLSRV PSEIFLKSITKD+TSVEITY SSLNPRLVRRRLRHI+
Sbjct: 142 -------------IGLKLLSRVKPSEIFLKSITKDVTSVEITYPSSLNPRLVRRRLRHIA 174

[Close]

BLAST of Cp4.1LG12g09580 vs. ExPASy TrEMBL
Match: A0A6J1KLS4 (uncharacterized protein LOC111494421 OS=Cucurbita maxima OX=3661 GN=LOC111494421 PE=4 SV=1)

HSP 1 Score: 215 bits (548), Expect = 8.46e-67
Identity = 124/170 (72.94%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 32  RARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSSKSDALSRGTGR 91
           RARLVVFPIRGRNWCFSRS+D AASDSASTQ  STLKDL TKI S SSSKSDALS  T  
Sbjct: 2   RARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTSS 61

Query: 92  SNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISSESNWISIDFSA 151
           SNAEIVTDFISFKMNKAWTALEKAP+ SFKNKLHG                         
Sbjct: 62  SNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHG------------------------- 121

Query: 152 CRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHISL 201
             IGL LLSRV PSEIFLKSITKD+TSVEI Y SSLNPRLVRRRLRHI+L
Sbjct: 122 --IGLKLLSRVKPSEIFLKSITKDVTSVEIAYPSSLNPRLVRRRLRHIAL 144

[Close]

BLAST of Cp4.1LG12g09580 vs. ExPASy TrEMBL
Match: A0A6J1HLD1 (uncharacterized protein LOC111464584 OS=Cucurbita moschata OX=3662 GN=LOC111464584 PE=4 SV=1)

HSP 1 Score: 215 bits (548), Expect = 8.46e-67
Identity = 124/170 (72.94%), Postives = 128/170 (75.29%), Query Frame = 0


Query: 32  RARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSSKSDALSRGTGR 91
           RARLVVFPIRGRNWCFSRS+D AASDSASTQ  STLKDL TKI S SSSKSDALS  T  
Sbjct: 2   RARLVVFPIRGRNWCFSRSVDPAASDSASTQTPSTLKDLWTKISSPSSSKSDALSSSTSS 61

Query: 92  SNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISSESNWISIDFSA 151
           SNAEIVTDFISFKMNKAWTALEKAP+ SFKNKLHG                         
Sbjct: 62  SNAEIVTDFISFKMNKAWTALEKAPDGSFKNKLHG------------------------- 121

Query: 152 CRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHISL 201
             IGL LLSRV PSEIFLKSITKD+TSVEI Y SSLNPRLVRRRLRHI+L
Sbjct: 122 --IGLKLLSRVKPSEIFLKSITKDVTSVEIAYPSSLNPRLVRRRLRHIAL 144

[Close]

BLAST of Cp4.1LG12g09580 vs. TAIR 10
Match: AT1G53760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786); Has 171 Blast hits to 171 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-34
Identity = 84/170 (49.41%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 32  RARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSSKSDALSRGTGR 91
           RARLVVFPI+G+ WCFSRS+D  A+ S S    +T++ L  KI S S   +         
Sbjct: 2   RARLVVFPIKGKKWCFSRSVDPFAAQSPSGVTPTTVRGLWKKISSESKPIN--------- 61

Query: 92  SNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISSESNWISIDFSA 151
           +NAE++ DFIS KMNKAW  LEKAP+ S KNK+HG                         
Sbjct: 62  ANAELLVDFISDKMNKAWVGLEKAPDGSIKNKIHG------------------------- 121

Query: 152 CRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHISL 202
              GL LL+RV PSEIFLKSI+K++TSV++TY  SL+PRLVRRRLRHI++
Sbjct: 122 --FGLKLLARVKPSEIFLKSISKEVTSVQVTYPPSLDPRLVRRRLRHIAM 135

[Close]

BLAST of Cp4.1LG12g09580 vs. TAIR 10
Match: AT1G53760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plastid; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2343 (InterPro:IPR018786). )

HSP 1 Score: 141.7 bits (356), Expect = 6.3e-34
Identity = 84/170 (49.41%), Postives = 106/170 (62.35%), Query Frame = 0


Query: 32  RARLVVFPIRGRNWCFSRSIDLAASDSASTQILSTLKDLLTKIPSSSSSKSDALSRGTGR 91
           RARLVVFPI+G+ WCFSRS+D  A+ S S    +T++ L  KI S S   +         
Sbjct: 2   RARLVVFPIKGKKWCFSRSVDPFAAQSPSGVTPTTVRGLWKKISSESKPIN--------- 61

Query: 92  SNAEIVTDFISFKMNKAWTALEKAPEKSFKNKLHGLASAILLVLCHISSESNWISIDFSA 151
           +NAE++ DFIS KMNKAW  LEKAP+ S KNK+HG                         
Sbjct: 62  ANAELLVDFISDKMNKAWVGLEKAPDGSIKNKIHG------------------------- 121

Query: 152 CRIGLMLLSRVTPSEIFLKSITKDITSVEITYRSSLNPRLVRRRLRHISL 202
              GL LL+RV PSEIFLKSI+K++TSV++TY  SL+PRLVRRRLRHI++
Sbjct: 122 --FGLKLLARVKPSEIFLKSISKEVTSVQVTYPPSLDPRLVRRRLRHIAM 135

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09580 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g09580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548427.1	1.82e-108	86.57	uncharacterized protein LOC111807082 [Cucurbita pepo subsp. pepo]	[more]
XP_022953932.1	3.98e-102	82.59	uncharacterized protein LOC111456340 [Cucurbita moschata]	[more]
XP_022991797.1	1.98e-99	81.09	uncharacterized protein LOC111488336 [Cucurbita maxima]	[more]
KAG6575406.1	2.04e-74	76.63	O-fucosyltransferase 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6593588.1	1.75e-66	72.94	hypothetical protein SDJN03_13064, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG12g09580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPM4	1.93e-102	82.59	uncharacterized protein LOC111456340 OS=Cucurbita moschata OX=3662 GN=LOC1114563...	[more]
A0A6J1JMV6	9.59e-100	81.09	uncharacterized protein LOC111488336 OS=Cucurbita maxima OX=3661 GN=LOC111488336...	[more]
A0A0A0K9A3	1.60e-68	69.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447960 PE=4 SV=1	[more]
A0A6J1KLS4	8.46e-67	72.94	uncharacterized protein LOC111494421 OS=Cucurbita maxima OX=3661 GN=LOC111494421...	[more]
A0A6J1HLD1	8.46e-67	72.94	uncharacterized protein LOC111464584 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]

BLAST of Cp4.1LG12g09580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53760.1	6.3e-34	49.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G53760.2	6.3e-34	49.41	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018786	Protein of unknown function DUF2343	PFAM	PF10173	Mit_KHE1	coord: 34..199 e-value: 3.8E-6 score: 27.1
IPR018786	Protein of unknown function DUF2343	PANTHER	PTHR28062	K+-H+ EXCHANGE-LIKE PROTEIN	coord: 32..132 coord: 154..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09580.1	Cp4.1LG12g09580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane