
Cp4.1LG12g09440 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGATATCATTTTTATATATAAATCTGTCGTATCCAATTCCCTCACACTCTCATCATCTTCCCCTTCCCAAATTCAACACCCCCTTCACGATGAAGCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTGGACCCCCATGATGATATTTACATGTACAGGTACTCAATTTTTGCTAAATTCATTACCTGTTCATCATGGTTTATGAAATAGATCGGGAGTTCTTGTGTTTGGTGATCAAATCATGGAATTTGGTCATGAATTTTGGGTTTTTTTTTTATGATGTTTGGTCGTGTGAAACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGTCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATGGCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTCTCGTTTAAGTTCTTGTCCATGGGTTTCTTTGTGTGTGTGTGTGTTGTAATGATGTAAGGCTGAAATGAAACATGTTTGGGATAATGTACTAACGTTATCTTCAAACTATCTGTCGGTGTATTATTGAGGGGTTG TGGATATCATTTTTATATATAAATCTGTCGTATCCAATTCCCTCACACTCTCATCATCTTCCCCTTCCCAAATTCAACACCCCCTTCACGATGAAGCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTGGACCCCCATGATGATATTTACATGTACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGTCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAGTCTCCTCTGTTTTGAATCTAATGGAAATGGCAAAATTGTAATTAAAATGGATGGAAGTAATAGAAGCCCTAAAGAGTGTTCTCGTTTAAGTTCTTGTCCATGGGTTTCTTTGTGTGTGTGTGTGTTGTAATGATGTAAGGCTGAAATGAAACATGTTTGGGATAATGTACTAACGTTATCTTCAAACTATCTGTCGGTGTATTATTGAGGGGTTG ATGAAGCACAGGAATCCAACCAATTTGAAGGCTGTCGGGTTAGGAATCCTTGTTCATCGATCCCCAGAACCAAATCTAGTGGTTAAACAATCCAGAAAGCTTGTTTTTTCACTCACTTCATCTTCTAATAACCCATCTTTTCTCAAATCATGTGTTCTTTGCAACAAGAATCTGGACCCCCATGATGATATTTACATGTACAGGGGAGATCAAGGTTACTGTAGTGTGAAGTGTCGGAACCAGCAGATTGAAATGGATGAAAAGAAGGAATTAGAAGCTTCTACAAGGAAAATGGTGGAAGCTTACAGGCAATGTCAGAGAAATGAAGGAAGTGAAACTCGCCGTCTCTTGGAGGATCTCCGGCGGCCACATCACCGGCTTCCATATCTCCGGCGACCTGTTGTTTCGTAG MKHRNPTNLKAVGLGILVHRSPEPNLVVKQSRKLVFSLTSSSNNPSFLKSCVLCNKNLDPHDDIYMYRGDQGYCSVKCRNQQIEMDEKKELEASTRKMVEAYRQCQRNEGSETRRLLEDLRRPHHRLPYLRRPVVS Homology
BLAST of Cp4.1LG12g09440 vs. ExPASy Swiss-Prot
Match: P0DO11 (FCS-Like Zinc finger 17 OS=Arabidopsis thaliana OX=3702 GN=FLZ17 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.7e-19 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy Swiss-Prot
Match: P0DO12 (FCS-Like Zinc finger 18 OS=Arabidopsis thaliana OX=3702 GN=FLZ18 PE=1 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 3.7e-19 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy Swiss-Prot
Match: Q9LV75 (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10 Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.2e-10 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-09 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. NCBI nr
Match: XP_023548878.1 (uncharacterized protein LOC111807399 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 277 bits (708), Expect = 6.38e-94 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. NCBI nr
Match: KAG7013956.1 (Protein MARD1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 273 bits (699), Expect = 1.51e-92 Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. NCBI nr
Match: XP_022953803.1 (uncharacterized protein LOC111456219 [Cucurbita moschata]) HSP 1 Score: 272 bits (696), Expect = 4.32e-92 Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. NCBI nr
Match: XP_022992436.1 (protein MARD1-like [Cucurbita maxima]) HSP 1 Score: 268 bits (686), Expect = 1.45e-90 Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. NCBI nr
Match: XP_038896964.1 (FCS-Like Zinc finger 17-like isoform X1 [Benincasa hispida]) HSP 1 Score: 196 bits (498), Expect = 1.11e-61 Identity = 106/142 (74.65%), Postives = 121/142 (85.21%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy TrEMBL
Match: A0A6J1GPB9 (uncharacterized protein LOC111456219 OS=Cucurbita moschata OX=3662 GN=LOC111456219 PE=3 SV=1) HSP 1 Score: 272 bits (696), Expect = 2.09e-92 Identity = 133/136 (97.79%), Postives = 135/136 (99.26%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy TrEMBL
Match: A0A6J1JTJ9 (protein MARD1-like OS=Cucurbita maxima OX=3661 GN=LOC111488741 PE=3 SV=1) HSP 1 Score: 268 bits (686), Expect = 7.02e-91 Identity = 132/136 (97.06%), Postives = 134/136 (98.53%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy TrEMBL
Match: A0A5D3C0J4 (DUF581 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001630 PE=3 SV=1) HSP 1 Score: 194 bits (492), Expect = 4.28e-61 Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy TrEMBL
Match: A0A1S3CGJ4 (uncharacterized protein LOC103500647 OS=Cucumis melo OX=3656 GN=LOC103500647 PE=3 SV=1) HSP 1 Score: 194 bits (492), Expect = 4.28e-61 Identity = 107/141 (75.89%), Postives = 120/141 (85.11%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. ExPASy TrEMBL
Match: A0A0A0K9B4 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G448060 PE=3 SV=1) HSP 1 Score: 191 bits (485), Expect = 5.15e-60 Identity = 102/131 (77.86%), Postives = 116/131 (88.55%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. TAIR 10
Match: AT1G53885.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. TAIR 10
Match: AT1G53903.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 95.9 bits (237), Expect = 2.7e-20 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. TAIR 10
Match: AT5G65040.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 66.6 bits (161), Expect = 1.7e-11 Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 65.9 bits (159), Expect = 3.0e-11 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of Cp4.1LG12g09440 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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