
Cp4.1LG12g09420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGCTGTTCTTCACAAGCTATGGGACGGAACGCTGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTATCGGAATCGCCTCTGGTTAAGATTTCCGGTGACCTTCCTGTAACTCGGAGCATCTTCATTCTCAGGAGTAACTCCGATTTCAGGAGCTTCTTGGATGATCGTAATGGAAGGATGATTGATTCTCCCGCGGGAATAATCTGA ATGACTGCTGTTCTTCACAAGCTATGGGACGGAACGCTGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTATCGGAATCGCCTCTGGTTAAGATTTCCGGTGACCTTCCTGTAACTCGGAGCATCTTCATTCTCAGGAGTAACTCCGATTTCAGGAGCTTCTTGGATGATCGTAATGGAAGGATGATTGATTCTCCCGCGGGAATAATCTGA ATGACTGCTGTTCTTCACAAGCTATGGGACGGAACGCTGTCAGACACCGGCTTCGGAATGCTTCGCAAGCATGATTCCTTTTCGGTATCGGAATCGCCTCTGGTTAAGATTTCCGGTGACCTTCCTGTAACTCGGAGCATCTTCATTCTCAGGAGTAACTCCGATTTCAGGAGCTTCTTGGATGATCGTAATGGAAGGATGATTGATTCTCCCGCGGGAATAATCTGA MTAVLHKLWDGTLSDTGFGMLRKHDSFSVSESPLVKISGDLPVTRSIFILRSNSDFRSFLDDRNGRMIDSPAGII Homology
BLAST of Cp4.1LG12g09420 vs. NCBI nr
Match: KAG7013965.1 (Dormancy-associated protein-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108 bits (270), Expect = 7.55e-29 Identity = 55/64 (85.94%), Postives = 57/64 (89.06%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. NCBI nr
Match: XP_038896212.1 (dormancy-associated protein homolog 4-like [Benincasa hispida]) HSP 1 Score: 99.4 bits (246), Expect = 6.04e-25 Identity = 54/75 (72.00%), Postives = 58/75 (77.33%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. NCBI nr
Match: KAG6593570.1 (Dormancy-associated protein-like 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025915.1 Dormancy-associated protein-like 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.7 bits (239), Expect = 9.79e-24 Identity = 53/77 (68.83%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. NCBI nr
Match: XP_023514880.1 (dormancy-associated protein homolog 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.5 bits (236), Expect = 2.06e-23 Identity = 52/77 (67.53%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. NCBI nr
Match: KAG6575424.1 (Trihelix transcription factor ASIL2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.4 bits (246), Expect = 3.28e-22 Identity = 51/62 (82.26%), Postives = 53/62 (85.48%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. ExPASy TrEMBL
Match: A0A6J1KIP1 (dormancy-associated protein homolog 4-like OS=Cucurbita maxima OX=3661 GN=LOC111494315 PE=3 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.33e-22 Identity = 51/77 (66.23%), Postives = 56/77 (72.73%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. ExPASy TrEMBL
Match: A0A0A0K9D5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448700 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.23e-21 Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. ExPASy TrEMBL
Match: A0A6J1DF61 (dormancy-associated protein homolog 4-like OS=Momordica charantia OX=3673 GN=LOC111019516 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.34e-21 Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. ExPASy TrEMBL
Match: A0A5A7UTX0 (Dormancy-associated protein-like protein 4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001500 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 3.53e-21 Identity = 48/76 (63.16%), Postives = 55/76 (72.37%), Query Frame = 0
BLAST of Cp4.1LG12g09420 vs. ExPASy TrEMBL
Match: A0A6J1HKD6 (dormancy-associated protein homolog 4-like OS=Cucurbita moschata OX=3662 GN=LOC111464350 PE=3 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.07e-19 Identity = 49/77 (63.64%), Postives = 54/77 (70.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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