Cp4.1LG12g09380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09380
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger CCCH domain-containing protein 62-like
Location	Cp4.1LG12: 5767145 .. 5770835 (+)
RNA-Seq Expression	Cp4.1LG12g09380
Synteny	Cp4.1LG12g09380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATACGATTGGGAGCAGAGCAAAACGATATCTATCCGAAACCGCATCGAACGGAGAAGTAATATATTTTGATGGCGTTTTCTGGGAGTTTCGTCACTGATCCGCGTCGCTTCGAACTAGAAGAATTTATCGATGAGCATGGAGAATTAGACGACCAGTGTGATTCTGATGATTCGGAATGTGATCCGAGTTACAGCTTTGAGGAAGATACCAATTCCAAGGTTTCAAGGATCTCGATCAGGAAGAAATCGAAGTCGTCGTAAGTATTTGAATCTTTTAACAGATTTCGAATCTTTTTCGCTGCGGTCAACTATTATATTTGATTAATCGATGTAGAGCTCGAGTTCATTAGGTTGTTTGCATTCTGCAGGGAAGTTGAAGATAGGGAACTGATCGCGCAAGAATACTTAGATTATGTAGCGCCAGAGGTTCTGAATCTAAATGAAAATGATGAAAAAGATATTAGTGAAGTGCTATCGATCATCAAAGGTCAGTCAAAGATTTTGAATGGGTTACCTAATTTTTTTTCATATTTGGTTCATTTACGAACAGAGAACGCCATTAGAAATCGGGACTTGTAAGCTTCTTTCCTTCCGCTTTTTGCGTTTCTTTTAAATAATCGATGTACTCTATCTGTTAGGTATTGTTGAAGTATTATGAATTTGTGTCCAGTTTAGAGTTACGTTTTCTTTCACCTACGGATTGCCGTTCCTCCTTATATGTATCCATTAGTTGAGAGGAGAAAGCACTAGAAAATACTTCCGTTCTTTCTACCAAATGGACTCTGAAAACGGAAGTTGACATTGTTCTTTAGTCTCTCCTTGTTCCTCACATAACACATTTCTCTATCATCCTTTGAGCCCAGCTGGTAAGCTAGAGAAACTCAAGGTAGAGCAATGCAAGGCTTATCTAAGAAAGAATGGATTGAGACTAACAGGAACCAAAGATGTACTCATTCAGCGTATCAACGAGCATTTGGAGTAAGTTTGTATTGTATGTATGGTAGGATAAAAATGGATTTCAAAGGAGTCTATGGCTAACGGCAAATTTCTTTTCATTTTCCTTCTCAATTATTTTCAGGATTTTAAATGGTGGAGGGGAGAAGAAATATCCAGAGTACAGCTTTACAGTAAATTGTAAAGGTATGATCTCAGTTACATAGTGCGGATTCTATGGCTGTTTGAACATCTAGAACAATTTATATGTTATTCTCATTTTAATATGTTGCTGATTTTTCTAGTGATGATTGATCATTAACTTTACTTCTAGTTTGTTTGATTTGTCTGCCGGACCAAGCATTCTTAAGAAATTCTTCTAGCTCGTCTTTTAGTGTCCAATATACTTGAATTGATAATAACTATCTCTGTTCTGTCGTTTCTGATATTCGTTTGATGCAGGTGATGCTTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAGATGTAAGCATTTAAATTTCATTAATCTCCTTTATTTCTATAACGAGCCGAGGACCAATAATTCAACAGCAAATTTTATCCGTGAGAATGATAAGAGGTTTTAATCTTACTTGGAACAATTGATTTCATGGATGGTTTCTTTATTGGGATATTCATCATTCAGGTACAATATAGCATCTAGGAGCTCCATAGGTCCTTCGTGTGGAACAAGAACTGTTGCAGGCCGCATTGTGAAAGAAAGTTATGGTGCTTCTAAACAACAACATACATTTACGGTGAGCACAGTGCATAACTTAGTAATTTTTTCACAAACCAGTGGAAAAAAAGTCGTAATCATGCGAAGAATATAGTACTTGAACTGTCAGATGATCTAGATTGCAAATAATATTGCTGGAACCACTGCTCAATAGCAAGGTTATTTGACTTTCATTTACTGTCTACATCCAATTTAGTCATTGGAAGTCAGCAAAATCTGTTCTTTAATTATTAATCAGATATATCTAATACTCTACTTTCTGCTATCGCCAAGGTGACTTTTAAAAGTCAAGTATGTTAATTGTCGACTAATGATGAACCATAGCTATTTTTTAGTAGTTATCTTCTTGAGTTCCGTTACCTTTGAACAGTATTTATTATACAAACCTTTCCCTTTTCATTTTCTGAGCCAGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCACTTCCTCCACTTCATCCCCTTTTAATCAAGGGTCGAAATCTTTATCGGATGAAGACTATGAGACAGGTTACAGTTGTTACATATTTTCTTCCTTTGGTTGGGGCCTTTCTCTTATAGTTTCAACTGTTCTTTAACATAACCCATGTTGTGAAATTGTAGACTTGGGAAGATGAAGGAGAAAGGCAAAAAGTTTTAATGGAAAAACATGCTAGGGGATCACTTGCAAGATCAACTAGGGAAGCACGTGTAGTAGAGAAAGAAAAAAGAAAAACGCACAATGAAAACAGGTATTATCATTTTGTATCAAACAAACAAACAAACAATCAACCTGTACTCCTATTTTGGTTAAGACAATAATAGTTTGATGAACTGTTCGGGTTTCTCTTTGCTTCAGGAAATCAAGGAGAGAAGGATTTAGTGAGAATCCCTCTCAGTCAAATCTATCTTCAGCAGGAACGATGTTAGCTGAAACCATGGTGAAGTTATCCGTTGATGCGAGAAAAGCGGTTCATCCACATCAGGAAAAAACTTTGTTCGGTAATTCAGGAGAACCTCCTCGTCAACATAACCCAACAAAGCAATCAAAATCAGATGTGTTCATTGATCATAGTAGACGGCCATATCAACTTCAGCCCATGGTGAATCCAGTGCAAAACAATTACTTTAGCCAACCCCAAATGAAAGCCGATCCTCCTCCAGTAAGCTACAATATACATCCCAGCATTTACAGGGCTGATCATCCTGCTTCTAGACTGGCAATGGGCCAAATGAATCTTTATCCTAAAGTGAACCAACATGCGGAAGAAAGCTACAAGCAACAACGATGCCGTTATTATGCCGTAGGGAGGTGTCACTACGGGGAGAATTGTAAATTCTCGCATGAAATGGCACAAGATTTTGCCGGAAGGGAGAAAGAAAGATTGGGCCGCCATCATCATCATCATCATCAGATGCATCAAAATGCTCGGCTTTGTCGGTAAGTATGTGTATATGCTCTGATAGAATTTGGGTTCTATTGAATTTTGTTTTGGCATTAAAAGGTAAGCGCATTGGTGGTTACTTTGATCACTTTTATGAAGGGAAGTTAGAGTGGAAATATGGAATACACCATCCTAGGAAGATTAGTAATCCAACTAGGCATGAAAGCAATGGTAACGCATGCTGCCTCTTCTTTGTTTGTATCTCTTATATTAGGAGAAAGAAAAGTTGGAGGGGAAGGCGTAAACCTTTTGAGAGTGTTTCTTGACAAGGGTTCATAATCCGGTTATTGCATCTAACCGCCCCACGACATAGTCACGTTTACCTACTTTTCTCGCTTCTTAATAGTGAAGATTATTTGCACATACCAATACAAGTCATTCAAGCATGTTTTGTCCTTACTCTCCTGCATCCTAGATAATTTCTAAGAGTTTACCTAAACTAGAATTGTTCTATGCATGAGCACACATAATACGGGAGGTTCCAGTATTTTTCCATTTTCATTATCATTTAATACAACTCCGCTAGCGTTCTATACTTCTCATATCGTTTTTCATACATTTCA

mRNA sequence

TATATACGATTGGGAGCAGAGCAAAACGATATCTATCCGAAACCGCATCGAACGGAGAAGTAATATATTTTGATGGCGTTTTCTGGGAGTTTCGTCACTGATCCGCGTCGCTTCGAACTAGAAGAATTTATCGATGAGCATGGAGAATTAGACGACCAGTGTGATTCTGATGATTCGGAATGTGATCCGAGTTACAGCTTTGAGGAAGATACCAATTCCAAGGTTTCAAGGATCTCGATCAGGAAGAAATCGAAGTCGTCGGAAGTTGAAGATAGGGAACTGATCGCGCAAGAATACTTAGATTATGTAGCGCCAGAGGTTCTGAATCTAAATGAAAATGATGAAAAAGATATTAGTGAAGTGCTATCGATCATCAAAGCTGGTAAGCTAGAGAAACTCAAGGTAGAGCAATGCAAGGCTTATCTAAGAAAGAATGGATTGAGACTAACAGGAACCAAAGATGTACTCATTCAGCGTATCAACGAGCATTTGGAGATTTTAAATGGTGGAGGGGAGAAGAAATATCCAGAGTACAGCTTTACAGTAAATTGTAAAGGTGATGCTTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAGATGTACAATATAGCATCTAGGAGCTCCATAGGTCCTTCGTGTGGAACAAGAACTGTTGCAGGCCGCATTGTGAAAGAAAGTTATGGTGCTTCTAAACAACAACATACATTTACGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCACTTCCTCCACTTCATCCCCTTTTAATCAAGGGTCGAAATCTTTATCGGATGAAGACTATGAGACAGACTTGGGAAGATGAAGGAGAAAGGCAAAAAGTTTTAATGGAAAAACATGCTAGGGGATCACTTGCAAGATCAACTAGGGAAGCACGTGTAGTAGAGAAAGAAAAAAGAAAAACGCACAATGAAAACAGGAAATCAAGGAGAGAAGGATTTAGTGAGAATCCCTCTCAGTCAAATCTATCTTCAGCAGGAACGATGTTAGCTGAAACCATGGTGAAGTTATCCGTTGATGCGAGAAAAGCGGTTCATCCACATCAGGAAAAAACTTTGTTCGGTAATTCAGGAGAACCTCCTCGTCAACATAACCCAACAAAGCAATCAAAATCAGATGTGTTCATTGATCATAGTAGACGGCCATATCAACTTCAGCCCATGGTGAATCCAGTGCAAAACAATTACTTTAGCCAACCCCAAATGAAAGCCGATCCTCCTCCAGTAAGCTACAATATACATCCCAGCATTTACAGGGCTGATCATCCTGCTTCTAGACTGGCAATGGGCCAAATGAATCTTTATCCTAAAGTGAACCAACATGCGGAAGAAAGCTACAAGCAACAACGATGCCGTTATTATGCCGTAGGGAGGTGTCACTACGGGGAGAATTGTAAATTCTCGCATGAAATGGCACAAGATTTTGCCGGAAGGGAGAAAGAAAGATTGGGCCGCCATCATCATCATCATCATCAGATGCATCAAAATGCTCGGCTTTGTCGGTAAGTATGTGTATATGCTCTGATAGAATTTGGGTTCTATTGAATTTTGTTTTGGCATTAAAAGGTAAGCGCATTGGTGGTTACTTTGATCACTTTTATGAAGGGAAGTTAGAGTGGAAATATGGAATACACCATCCTAGGAAGATTAGTAATCCAACTAGGCATGAAAGCAATGGTAACGCATGCTGCCTCTTCTTTGTTTGTATCTCTTATATTAGGAGAAAGAAAAGTTGGAGGGGAAGGCGTAAACCTTTTGAGAGTGTTTCTTGACAAGGGTTCATAATCCGGTTATTGCATCTAACCGCCCCACGACATAGTCACGTTTACCTACTTTTCTCGCTTCTTAATAGTGAAGATTATTTGCACATACCAATACAAGTCATTCAAGCATGTTTTGTCCTTACTCTCCTGCATCCTAGATAATTTCTAAGAGTTTACCTAAACTAGAATTGTTCTATGCATGAGCACACATAATACGGGAGGTTCCAGTATTTTTCCATTTTCATTATCATTTAATACAACTCCGCTAGCGTTCTATACTTCTCATATCGTTTTTCATACATTTCA

Coding sequence (CDS)

ATGGCGTTTTCTGGGAGTTTCGTCACTGATCCGCGTCGCTTCGAACTAGAAGAATTTATCGATGAGCATGGAGAATTAGACGACCAGTGTGATTCTGATGATTCGGAATGTGATCCGAGTTACAGCTTTGAGGAAGATACCAATTCCAAGGTTTCAAGGATCTCGATCAGGAAGAAATCGAAGTCGTCGGAAGTTGAAGATAGGGAACTGATCGCGCAAGAATACTTAGATTATGTAGCGCCAGAGGTTCTGAATCTAAATGAAAATGATGAAAAAGATATTAGTGAAGTGCTATCGATCATCAAAGCTGGTAAGCTAGAGAAACTCAAGGTAGAGCAATGCAAGGCTTATCTAAGAAAGAATGGATTGAGACTAACAGGAACCAAAGATGTACTCATTCAGCGTATCAACGAGCATTTGGAGATTTTAAATGGTGGAGGGGAGAAGAAATATCCAGAGTACAGCTTTACAGTAAATTGTAAAGGTGATGCTTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAGATGTACAATATAGCATCTAGGAGCTCCATAGGTCCTTCGTGTGGAACAAGAACTGTTGCAGGCCGCATTGTGAAAGAAAGTTATGGTGCTTCTAAACAACAACATACATTTACGATTGAAGTATTGTGGAGTAAGGGTGAGAAACCACTTCCTCCACTTCATCCCCTTTTAATCAAGGGTCGAAATCTTTATCGGATGAAGACTATGAGACAGACTTGGGAAGATGAAGGAGAAAGGCAAAAAGTTTTAATGGAAAAACATGCTAGGGGATCACTTGCAAGATCAACTAGGGAAGCACGTGTAGTAGAGAAAGAAAAAAGAAAAACGCACAATGAAAACAGGAAATCAAGGAGAGAAGGATTTAGTGAGAATCCCTCTCAGTCAAATCTATCTTCAGCAGGAACGATGTTAGCTGAAACCATGGTGAAGTTATCCGTTGATGCGAGAAAAGCGGTTCATCCACATCAGGAAAAAACTTTGTTCGGTAATTCAGGAGAACCTCCTCGTCAACATAACCCAACAAAGCAATCAAAATCAGATGTGTTCATTGATCATAGTAGACGGCCATATCAACTTCAGCCCATGGTGAATCCAGTGCAAAACAATTACTTTAGCCAACCCCAAATGAAAGCCGATCCTCCTCCAGTAAGCTACAATATACATCCCAGCATTTACAGGGCTGATCATCCTGCTTCTAGACTGGCAATGGGCCAAATGAATCTTTATCCTAAAGTGAACCAACATGCGGAAGAAAGCTACAAGCAACAACGATGCCGTTATTATGCCGTAGGGAGGTGTCACTACGGGGAGAATTGTAAATTCTCGCATGAAATGGCACAAGATTTTGCCGGAAGGGAGAAAGAAAGATTGGGCCGCCATCATCATCATCATCATCAGATGCATCAAAATGCTCGGCTTTGTCGGTAA

Protein sequence

MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKSKSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRKNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMYNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFSENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQNARLCR

Homology

[Close]

BLAST of Cp4.1LG12g09380 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 1.5e-57
Identity = 158/431 (36.66%), Postives = 221/431 (51.28%), Query Frame = 0


Query: 15  ELEEFIDEHGELDDQCDSDDSE-------CDP-SYSFEEDTNSKVSRISIRKKSKSSEVE 74
           E ++  +E GE  D  + DD E       CDP + S+++ T    +   +   +      
Sbjct: 33  ESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAADGDLEVDAVLRSRM 92

Query: 75  DRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRKNGLRLT 134
            R  ++    D     +  + + +   ++ V  ++  G+LEKLKV +CKAYLR + LRL+
Sbjct: 93  ARMSLSSARKDRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLKVYECKAYLRMHKLRLS 152

Query: 135 GTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMYNIASRS 194
           G K+VL+ RI   +E+    GE KYP  SF +NC+GD+C GDVV+FEQ +Y+    A R 
Sbjct: 153 GNKEVLLTRIRGQIEV-KTMGEVKYPVSSFVLNCQGDSCKGDVVVFEQNIYKRKKGAPRG 212

Query: 195 SIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKT 254
             G  CG RT AGRI+KESYG  KQQHTFTIE+LWS+G KP PPLHPLLIKGRNLY+ KT
Sbjct: 213 VKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPPLHPLLIKGRNLYKDKT 272

Query: 255 MRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFSENPSQS 314
           MRQ W DE ER + L EKHARG +AR TRE R+ +KE  +    NR   +E  S+     
Sbjct: 273 MRQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRLNR--NKENKSKGQDNM 332

Query: 315 NLSSAGTMLAETMVKLSVDARKA--VHPHQEKTLFGNSGEP------------------- 374
           N  S+  +  +  V  +   ++A  + P  +    GNS +                    
Sbjct: 333 NKKSSQAVFPQHTVTTNTVQKRAEKIIPSLQHGESGNSSQQHLSSKQTPTEQLLHYLPQF 392

Query: 375 --PRQHNP------TKQSKSDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYN 409
             P+QHN       T ++ +   I+H     Q    V   Q     QP     P P+  +
Sbjct: 393 PHPQQHNEVLLQKGTSRTSTTQLINHQAPSLQHAVKVETTQQQQQQQPPKSIKPAPIQQS 452

[Close]

BLAST of Cp4.1LG12g09380 vs. NCBI nr
Match: XP_023548827.1 (zinc finger CCCH domain-containing protein 62-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 959 bits (2479), Expect = 0.0
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS
Sbjct: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120
           KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK
Sbjct: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300
           LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360
           ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360

Query: 361 IDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLY 420
           IDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLY
Sbjct: 361 IDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLY 420

Query: 421 PKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQ 480
           PKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQ
Sbjct: 421 PKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQ 480

Query: 481 NARLCR 486
           NARLCR
Sbjct: 481 NARLCR 486

[Close]

BLAST of Cp4.1LG12g09380 vs. NCBI nr
Match: XP_023548826.1 (zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 948 bits (2451), Expect = 0.0
Identity = 486/503 (96.62%), Postives = 486/503 (96.62%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS
Sbjct: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIK-----------------A 120
           KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIK                 A
Sbjct: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKVSPCSSHNTFLYHPLSPA 120

Query: 121 GKLEKLKVEQCKAYLRKNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGD 180
           GKLEKLKVEQCKAYLRKNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGD
Sbjct: 121 GKLEKLKVEQCKAYLRKNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGD 180

Query: 181 ACMGDVVMFEQKVYEMYNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSK 240
           ACMGDVVMFEQKVYEMYNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSK
Sbjct: 181 ACMGDVVMFEQKVYEMYNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSK 240

Query: 241 GEKPLPPLHPLLIKGRNLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKE 300
           GEKPLPPLHPLLIKGRNLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKE
Sbjct: 241 GEKPLPPLHPLLIKGRNLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKE 300

Query: 301 KRKTHNENRKSRREGFSENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSG 360
           KRKTHNENRKSRREGFSENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSG
Sbjct: 301 KRKTHNENRKSRREGFSENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSG 360

Query: 361 EPPRQHNPTKQSKSDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIY 420
           EPPRQHNPTKQSKSDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIY
Sbjct: 361 EPPRQHNPTKQSKSDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIY 420

Query: 421 RADHPASRLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGR 480
           RADHPASRLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGR
Sbjct: 421 RADHPASRLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGR 480

Query: 481 EKERLGRHHHHHHQMHQNARLCR 486
           EKERLGRHHHHHHQMHQNARLCR
Sbjct: 481 EKERLGRHHHHHHQMHQNARLCR 503

[Close]

BLAST of Cp4.1LG12g09380 vs. NCBI nr
Match: XP_022954256.1 (zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata])

HSP 1 Score: 929 bits (2402), Expect = 0.0
Identity = 470/486 (96.71%), Postives = 477/486 (98.15%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAFSG+FVTDPRRFELEE ID+HGE DDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120
           K SEVEDRELIAQ YLD V PEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NIASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300
           LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360
           ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQE+ LFGNSGEPPRQHNPTKQ+KSDVF
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQERPLFGNSGEPPRQHNPTKQTKSDVF 360

Query: 361 IDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLY 420
           IDHSRRPYQLQPM+NPVQNNYFSQPQMKADPPPVSYNIHPSIYRAD+PASRLAMGQMNLY
Sbjct: 361 IDHSRRPYQLQPMMNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADYPASRLAMGQMNLY 420

Query: 421 PKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQ 480
           PKVNQHA+ESYKQQRCRYYAVGRCHYGENCKFSHEM QDFAGREKERLGRHHHHHHQMHQ
Sbjct: 421 PKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQDFAGREKERLGRHHHHHHQMHQ 480

Query: 481 NARLCR 486
           NARLCR
Sbjct: 481 NARLCR 486

[Close]

BLAST of Cp4.1LG12g09380 vs. NCBI nr
Match: KAG6575426.1 (Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 926 bits (2392), Expect = 0.0
Identity = 470/488 (96.31%), Postives = 476/488 (97.54%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAFSG+FVTDPRRFELEE ID+HGE DDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120
           K SEVEDRELIAQ YLD V PEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NIASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300
           LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360
           ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQE+ LFGNSGEPPRQHNPTKQ+KSDVF
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQERPLFGNSGEPPRQHNPTKQTKSDVF 360

Query: 361 IDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLY 420
           IDHSRRPYQLQPMVNPVQNNYFSQPQMK DPPPVSYN+HPSIYRADHPASRLAMGQMNLY
Sbjct: 361 IDHSRRPYQLQPMVNPVQNNYFSQPQMKPDPPPVSYNVHPSIYRADHPASRLAMGQMNLY 420

Query: 421 PKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHH--QM 480
           PKVNQHA+ESYKQQRCRYYAVGRCHYGENCKFSHEM QDFAGREKERLGRHHHHHH  QM
Sbjct: 421 PKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQDFAGREKERLGRHHHHHHHHQM 480

Query: 481 HQNARLCR 486
           HQNARLCR
Sbjct: 481 HQNARLCR 488

[Close]

BLAST of Cp4.1LG12g09380 vs. NCBI nr
Match: XP_022992241.1 (zinc finger CCCH domain-containing protein 62-like [Cucurbita maxima])

HSP 1 Score: 904 bits (2337), Expect = 0.0
Identity = 465/487 (95.48%), Postives = 473/487 (97.13%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEED-TNSKVSRISIRKK 60
           MAFSG+FVTDPRRFELEE IDEHGE DDQC+SDDSECDPSY FEED TNSKVS   IRKK
Sbjct: 1   MAFSGNFVTDPRRFELEELIDEHGESDDQCNSDDSECDPSYGFEEDNTNSKVS---IRKK 60

Query: 61  SKSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR 120
           SK SEVEDRELIAQ YLD VAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR
Sbjct: 61  SKPSEVEDRELIAQAYLDDVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR 120

Query: 121 KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM 180
           KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM
Sbjct: 121 KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM 180

Query: 181 YNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240
           YNIASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR
Sbjct: 181 YNIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240

Query: 241 NLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF 300
           NLYRMKT+RQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF
Sbjct: 241 NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF 300

Query: 301 SENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDV 360
           +ENPS+SNLSSAGTMLAETMVKLSVDARKAVHPHQEK LFG+SGEP RQHNPTKQ+KSDV
Sbjct: 301 NENPSKSNLSSAGTMLAETMVKLSVDARKAVHPHQEKPLFGHSGEP-RQHNPTKQTKSDV 360

Query: 361 FIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNL 420
           FIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIY ADHPASRLAMGQMNL
Sbjct: 361 FIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYSADHPASRLAMGQMNL 420

Query: 421 YPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMH 480
           YPKVNQHA+ESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMH
Sbjct: 421 YPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMH 480

Query: 481 QNARLCR 486
           QNARLCR
Sbjct: 481 QNARLCR 483

[Close]

BLAST of Cp4.1LG12g09380 vs. ExPASy TrEMBL
Match: A0A6J1GQF0 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662 GN=LOC111456567 PE=4 SV=1)

HSP 1 Score: 929 bits (2402), Expect = 0.0
Identity = 470/486 (96.71%), Postives = 477/486 (98.15%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAFSG+FVTDPRRFELEE ID+HGE DDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120
           K SEVEDRELIAQ YLD V PEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NIASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300
           LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360
           ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQE+ LFGNSGEPPRQHNPTKQ+KSDVF
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQERPLFGNSGEPPRQHNPTKQTKSDVF 360

Query: 361 IDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNLY 420
           IDHSRRPYQLQPM+NPVQNNYFSQPQMKADPPPVSYNIHPSIYRAD+PASRLAMGQMNLY
Sbjct: 361 IDHSRRPYQLQPMMNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADYPASRLAMGQMNLY 420

Query: 421 PKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMHQ 480
           PKVNQHA+ESYKQQRCRYYAVGRCHYGENCKFSHEM QDFAGREKERLGRHHHHHHQMHQ
Sbjct: 421 PKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQDFAGREKERLGRHHHHHHQMHQ 480

Query: 481 NARLCR 486
           NARLCR
Sbjct: 481 NARLCR 486

[Close]

BLAST of Cp4.1LG12g09380 vs. ExPASy TrEMBL
Match: A0A6J1JT10 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111488621 PE=4 SV=1)

HSP 1 Score: 904 bits (2337), Expect = 0.0
Identity = 465/487 (95.48%), Postives = 473/487 (97.13%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEED-TNSKVSRISIRKK 60
           MAFSG+FVTDPRRFELEE IDEHGE DDQC+SDDSECDPSY FEED TNSKVS   IRKK
Sbjct: 1   MAFSGNFVTDPRRFELEELIDEHGESDDQCNSDDSECDPSYGFEEDNTNSKVS---IRKK 60

Query: 61  SKSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR 120
           SK SEVEDRELIAQ YLD VAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR
Sbjct: 61  SKPSEVEDRELIAQAYLDDVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR 120

Query: 121 KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM 180
           KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM
Sbjct: 121 KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM 180

Query: 181 YNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240
           YNIASRSSIGPSCGTR VAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR
Sbjct: 181 YNIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240

Query: 241 NLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF 300
           NLYRMKT+RQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF
Sbjct: 241 NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF 300

Query: 301 SENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDV 360
           +ENPS+SNLSSAGTMLAETMVKLSVDARKAVHPHQEK LFG+SGEP RQHNPTKQ+KSDV
Sbjct: 301 NENPSKSNLSSAGTMLAETMVKLSVDARKAVHPHQEKPLFGHSGEP-RQHNPTKQTKSDV 360

Query: 361 FIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPASRLAMGQMNL 420
           FIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIY ADHPASRLAMGQMNL
Sbjct: 361 FIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYSADHPASRLAMGQMNL 420

Query: 421 YPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMH 480
           YPKVNQHA+ESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMH
Sbjct: 421 YPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMAQDFAGREKERLGRHHHHHHQMH 480

Query: 481 QNARLCR 486
           QNARLCR
Sbjct: 481 QNARLCR 483

[Close]

BLAST of Cp4.1LG12g09380 vs. ExPASy TrEMBL
Match: A0A5A7V0Q9 (Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001440 PE=4 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 1.85e-230
Identity = 352/509 (69.16%), Postives = 397/509 (78.00%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAF  +  TDP RF+LEE ID++GE DD+  SDDSECDPSYS ++ TNSK SR SIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120
           K  +  D  L     +D   P +  LNE DEKD  EVLSIIKAGKLEKLKVEQCK+YLRK
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRI EHLEILNGGGEKKYPEYSF VNCKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NIASRSS GPSCGTRTVAGRIVKESYG+SKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300
           LYRMKTMRQTWEDE ERQKVL EKHARGSLARS REARV+EKEKRKTH ENR+SR+EG+ 
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360
            NPS+SNLSSAGTMLAE+M KL+VD+R  VH HQE+  FGN G+       T Q+KS +F
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQERPSFGNLGKA------TDQTKSHMF 360

Query: 361 IDHSRRPYQLQPMV-------------NPVQNNYFSQPQMKADPPPVSYNIHPSIYRADH 420
           ID +R P Q Q M+             N +QNNY+SQPQ KA+PP  S+NI PSIYR + 
Sbjct: 361 IDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPP-ASFNIQPSIYRTNP 420

Query: 421 PAS----------RLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMA 480
            AS           + M +MNLYPKVN  A+E Y Q +CRY+AVG+C+Y E+CKFSH+M 
Sbjct: 421 AASSVNKVLDNRNHIPMDRMNLYPKVNHSAQEGYNQPQCRYFAVGKCYYRESCKFSHDMT 480

Query: 481 QDFAGREKERLGRHHHHHHQMHQNARLCR 486
           +DF  REKERLG ++H    MHQNAR CR
Sbjct: 481 EDFVQREKERLGHYYH----MHQNARHCR 498

[Close]

BLAST of Cp4.1LG12g09380 vs. ExPASy TrEMBL
Match: A0A1S3CH36 (zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103500669 PE=4 SV=1)

HSP 1 Score: 651 bits (1679), Expect = 1.85e-230
Identity = 352/509 (69.16%), Postives = 397/509 (78.00%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAF  +  TDP RF+LEE ID++GE DD+  SDDSECDPSYS ++ TNSK SR SIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120
           K  +  D  L     +D   P +  LNE DEKD  EVLSIIKAGKLEKLKVEQCK+YLRK
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRI EHLEILNGGGEKKYPEYSF VNCKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240
           NIASRSS GPSCGTRTVAGRIVKESYG+SKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300
           LYRMKTMRQTWEDE ERQKVL EKHARGSLARS REARV+EKEKRKTH ENR+SR+EG+ 
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDVF 360
            NPS+SNLSSAGTMLAE+M KL+VD+R  VH HQE+  FGN G+       T Q+KS +F
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQERPSFGNLGKA------TDQTKSHMF 360

Query: 361 IDHSRRPYQLQPMV-------------NPVQNNYFSQPQMKADPPPVSYNIHPSIYRADH 420
           ID +R P Q Q M+             N +QNNY+SQPQ KA+PP  S+NI PSIYR + 
Sbjct: 361 IDQNRLPSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPP-ASFNIQPSIYRTNP 420

Query: 421 PAS----------RLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEMA 480
            AS           + M +MNLYPKVN  A+E Y Q +CRY+AVG+C+Y E+CKFSH+M 
Sbjct: 421 AASSVNKVLDNRNHIPMDRMNLYPKVNHSAQEGYNQPQCRYFAVGKCYYRESCKFSHDMT 480

Query: 481 QDFAGREKERLGRHHHHHHQMHQNARLCR 486
           +DF  REKERLG ++H    MHQNAR CR
Sbjct: 481 EDFVQREKERLGHYYH----MHQNARHCR 498

[Close]

BLAST of Cp4.1LG12g09380 vs. ExPASy TrEMBL
Match: A0A0A0KCF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448770 PE=4 SV=1)

HSP 1 Score: 648 bits (1672), Expect = 2.14e-229
Identity = 355/510 (69.61%), Postives = 398/510 (78.04%), Query Frame = 0


Query: 1   MAFSGSFVTDPRRFELEEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60
           MAFSG+  TDP  F+LEE ID +G  DD  DSDD ECDPSYS ++ TNSK SR SIRKK 
Sbjct: 1   MAFSGNLGTDPSLFDLEEIIDNNGGSDDDYDSDDLECDPSYSIQKRTNSKTSRTSIRKKL 60

Query: 61  KSSEVEDRELIAQEYLDYVAPEVLNLNENDEKDISEVLSIIKAG-KLEKLKVEQCKAYLR 120
           K  ++ D  LI    +D V P +  +NE DEKD  EVLSIIKAG KLEKLKVEQCK+YLR
Sbjct: 61  KPLDIVDTNLIEDSDIDDVVPNIPIINEKDEKDTREVLSIIKAGGKLEKLKVEQCKSYLR 120

Query: 121 KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM 180
            NGLRL+GTKDVLIQRI EHLEILNGGGEKKYPEYSF VNCKGDACMGD+VMFEQKVYEM
Sbjct: 121 NNGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEM 180

Query: 181 YNIASRSSIGPSCGTRTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240
           YNIASRSS GPSCGTRTVAGRIVKESYG+SKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR
Sbjct: 181 YNIASRSSTGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240

Query: 241 NLYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF 300
           NLYRMKTMRQ WEDE ERQKVLMEKHARGSLARS REARV+EKEKRKTH ENR+ R+EGF
Sbjct: 241 NLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNREARVIEKEKRKTHKENREPRKEGF 300

Query: 301 SENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQEKTLFGNSGEPPRQHNPTKQSKSDV 360
             NPSQSNLSSAGT+LA +M KLSV+ R  VH HQE+  FGN  +       T Q+KS +
Sbjct: 301 RNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQERPSFGNLRKA------TDQTKSHL 360

Query: 361 FID--HSRRPYQLQPMV-NPVQNNYFSQPQMKADPPPVSYNIHPSIYRADHPA------- 420
           FID  ++R P+Q Q MV N ++NNY+SQPQ KA+PP + +NIHPSIYR +H A       
Sbjct: 361 FIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAI-FNIHPSIYRNNHAAASVNKVL 420

Query: 421 -------------SRLAMGQMNLYPKVNQHAEESYKQQRCRYYAVGRCHYGENCKFSHEM 480
                        SRL M +MNLYPKVN  A+E YKQQ+CRYYAVG+C+Y ENCKFSH+M
Sbjct: 421 DNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAVGKCYYRENCKFSHDM 480

Query: 481 AQDFAGREKERLGRHHHHHHQMHQNARLCR 486
            +DF  RE+ERLG  +H    MHQNAR CR
Sbjct: 481 TEDFVQRERERLGHRYH----MHQNARHCR 498

[Close]

BLAST of Cp4.1LG12g09380 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 201.1 bits (510), Expect = 2.1e-51
Identity = 162/475 (34.11%), Postives = 226/475 (47.58%), Query Frame = 0


Query: 17  EEFIDEHGELDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKSKSSEVEDRELIAQEYL 76
           E   DE  E +D+ D++ SE D  +S ++D             +  S+VE          
Sbjct: 25  ENNYDETEEEEDE-DTNSSEDDSDWSHDDD------------DATESDVE---------- 84

Query: 77  DYVAPEVLNLNENDEKDISE-VLSIIKAGK-LEKLKVEQCKAYLRKNGLRLTGTKDVLIQ 136
              A E+    +ND+ D  + V  ++ AG  L+ + V++CKAYLRK+GLRL+GTK V I 
Sbjct: 85  ---ADEIGVKGDNDDGDEDDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPVCID 144

Query: 137 RINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMYNIASRSSIGPSCGT 196
           RI EH  I +G GE  YP+ SF +NCKGD C GD+V+F QKV+  Y    +S  G   G 
Sbjct: 145 RILEHWRIKDGTGEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKS--GNIMGR 204

Query: 197 RTVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRNLYRMKTMRQTWEDE 256
           RTVAG++VKESYG +KQQHTFTIEVLW +G + LPPL+PLL+KGRNLYR+ T+RQ W +E
Sbjct: 205 RTVAGQVVKESYGTAKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRWPNE 264

Query: 257 GERQKVLMEKHARGSLARSTREARVVE----------------------KEKRKTHNENR 316
            +R KVL EKH RG+ AR     R ++                      K ++   +EN 
Sbjct: 265 EDRVKVLNEKHNRGAAARKVMRERKIKSGYVLKDGRLQKPGHVKKPCQVKTRKNEKDENL 324

Query: 317 KSR-------------------REGFSENPSQ-SNLSSAGTMLAETMVKLS-VDARKAVH 376
             R                    +G   +P+Q ++++ A    +      S      A  
Sbjct: 325 TQRLRQNTPANHSLVAFPNQNPSQGHKNHPTQLTDMNPANFYTSRPHAPRSHAPPTYAPR 384

Query: 377 PHQEKTLFGNSGEPPRQHNPTKQSKSDVFIDHSRRPYQLQPMVNPVQNNYFSQP-QMKAD 436
           PH  ++    +   PR + P   S +     +S +  Q      P    Y +Q  Q    
Sbjct: 385 PHAPRSYAPINSHLPRPNIPPYHSYT-----YSEQQNQTNQRPPPASYTYSTQQNQTNQR 444

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	1.5e-57	36.66	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of Cp4.1LG12g09380 vs. NCBI nr


Match Name	Identity	Description
XP_023548827.1	100.00	zinc finger CCCH domain-containing protein 62-like isoform X2 [Cucurbita pepo su...	[more]
XP_023548826.1	96.62	zinc finger CCCH domain-containing protein 62-like isoform X1 [Cucurbita pepo su...	[more]
XP_022954256.1	96.71	zinc finger CCCH domain-containing protein 62-like [Cucurbita moschata]	[more]
KAG6575426.1	96.31	Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma s...	[more]
XP_022992241.1	95.48	zinc finger CCCH domain-containing protein 62-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG12g09380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQF0	0.0	96.71	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JT10	0.0	95.48	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A5A7V0Q9	1.85e-230	69.16	Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CH36	1.85e-230	69.16	zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KCF3	2.14e-229	69.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448770 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g09380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	2.1e-51	34.11	SAP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 430..456 e-value: 8.8E-6 score: 35.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 430..457 score: 16.257792
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 106..140 e-value: 5.1E-5 score: 32.7
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 106..140 e-value: 6.5E-11 score: 41.8
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 106..140 score: 10.066002
None	No IPR available	GENE3D	2.30.30.1190		coord: 407..465 e-value: 1.0E-6 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 341..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..299
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 467..486
None	No IPR available	PANTHER	PTHR35323:SF4	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE	coord: 429..464 coord: 9..408
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 9..408
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 429..464
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30	SAP domain	coord: 105..145 e-value: 1.4E-7 score: 33.0
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 96..141
IPR041367	E3 ligase, CCCH-type zinc finger	PFAM	PF18044	zf-CCCH_4	coord: 436..454 e-value: 9.0E-7 score: 28.5
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 430..455

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09380.1	Cp4.1LG12g09380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding