Cp4.1LG12g09330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09330
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Protein DEEPER ROOTING 1
Location	Cp4.1LG12: 5822362 .. 5824441 (-)
RNA-Seq Expression	Cp4.1LG12g09330
Synteny	Cp4.1LG12g09330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAATATTGAATGCCCACCTCGTGTAAGTGTCATTACCATTAGATTAAAGAGGTATAGGGATCAACTCCACCTTTTCTACTTAGCAGTTGTCTTAGGATTTGCATCTCAAGATCCAACGGATCAAATTATGACACGGTCGGTTGTATAGAGGATGTTCCAGAATTGAACCCGCAGAATCCTCCTTTTGTAGTCTTTTCAAATTACAGGAAATTAAATTATTCAATTTTCTAGAGAATGTTCTTCATGCTAGTGGTGTATGTGCATTTGAGGTGTATAAGAGGAAGAATCAGCCATTAGTTTCAGGAGTGGAGGGTCTAGAGTGGGCACTGATCGTATCAGAGAGCTCTGTTTGGGAACTTGAACCAATTCTTACTTGCTGTCACTGACCAAGCTCCAGCATCAAACTTGCCTAATTTCTTCACGTTTTTTCATCTTCCCAATACTCCCCCCAGTGGCTTTTAAGATCTGGTTCTGAACTTCAATCACCTTCAGGTTGTTGTGTTGTTAGTTGAAGATGAAGGTGAGCTTGCTTTTACTTGATTCATTGTTCTCTTGTTCTGTTCTGGCATTCATCTTGTGTAGTTCATGAAGGATTGATCTTGGTTCAATGCAGTTCTTCAGCTGGATGCAGACTAAACTAAACGGCAAACAGGAGAAGAAAATCCCACATACATTCTCTACTTCTCGTAAGCTTTTCTCTCTTTTCCAAACTGGTGTCTAGAAGTGGTACTAGCTGATAGGACAGAGTCGAACACTTGTAATCTCAACGTTTTTAAAACGCATCTATTAATGAGGGGGTTAATCTCTAAAAAATTGTAATCTCCTCCCCAACGGATGTGGGTGTGAATCGAACACGACTCTCCACAATGGTTTGATATTGTCCACCTTGAGCCTAAGCTCTCATGGCTTTGGTTTGGTCTTTCCCAAAAGGCATCAAGCCAATAGAGAGTATTCCTTAATTATAAATCCATAATCATTCCCTCACCTCAATGGAGAGAGTATTCCTTAATTATAAACACATGATCATTCCCTAAATTAGCCGAGGTGGGACTTTCATCTAATAGTGGGATCTCACACATAGGACCTATGTGGCTTAATTGTTTCAACGGGGTGGGTGAAGAGACGGTTAGACGAACATGACTCTCCACATAAGCTCTCATGGCATTACTTTGGGCTTCCCCAAAAGGCCTCACACCAATGGAGAGACTATTCTTTGTTTATAAACACATGATCGTTCCTTAAATTAGTCATGTGGGACTTTCATCATCCAACCGAGACAGTTGGTGTCAGTTGGTGCAGAGAATGGATTCAGTGAAATGGTTTTGGTTGGATCCAAAATTTAGTTAGCTGGATCAAGATCCCAATGCAAACGGGGACATGATTCAAAAGGTAACCCGAATCACCAACCTGCAAACTTGGGTCCATGTGCCTTGTTCCCTCGACCCTTCAAAATAAATATTTAATACCCAAAATTTTCCATTTTTTATTCCCTTTGTTTGTCCACTTTCATTAGCTTTAGTTTATGGGTGCAAATCAACGTGAAAATCACATTGAAGTGTACAAATTGAATATGTTCCTTCTCCAACTTTGCAGAGCATAAAAAACAAGAGTCTCGTGAAGAGTTCAGCGATTGGCCTCATGGATTGCTAGCAATTGGAACTTTTGGCAACAATGAGATTAAAGATGAACAAGACATACAAGAGGAGGAGGATCCATCTTCTTCAGAAGAGATAGTTGATATCTCTCCTGAAGAAGTTGGTAAATTACAGAAAGAGTTAACAAAGCTTTTATCTCGAAAACCGAACGCCGAAAAGCAGGTTGCAGATCTTCCATTGGATAGATTTCTCAACTGTCCTTCAAGCTTGGAGGTTGACAGAAGAATCAGCAATCCACTTTGCAGTGATTTAGATGATAAAGATGAAGATATTGAAAGAACCATTGGTCTTATCATTGGGAAATGCAAAGACATTTGGGCTGATGGTAAAAAGAAAGCTATTGGGAAGAAATCCATCTCTTTTCTGCTCAAAAAGTTGTTTGTTTGTAGTAATGGCTTCACTCCTTTACCACCACCAAGTTTGA

mRNA sequence

TGAATATTGAATGCCCACCTCGTGTAAGTGTCATTACCATTAGATTAAAGAGGTATAGGGATCAACTCCACCTTTTCTACTTAGCAGTTGTCTTAGGATTTGCATCTCAAGATCCAACGGATCAAATTATGACACGGTCGGTTGTATAGAGGATGTTCCAGAATTGAACCCGCAGAATCCTCCTTTTGTAGTCTTTTCAAATTACAGGAAATTAAATTATTCAATTTTCTAGAGAATGTTCTTCATGCTAGTGGTGTATGTGCATTTGAGGTGTATAAGAGGAAGAATCAGCCATTAGTTTCAGGAGTGGAGGGTCTAGAGTGGGCACTGATCGTATCAGAGAGCTCTGTTTGGGAACTTGAACCAATTCTTACTTGCTGTCACTGACCAAGCTCCAGCATCAAACTTGCCTAATTTCTTCACGTTTTTTCATCTTCCCAATACTCCCCCCAGTGGCTTTTAAGATCTGGTTCTGAACTTCAATCACCTTCAGGTTGTTGTGTTGTTAGTTGAAGATGAAGTTCTTCAGCTGGATGCAGACTAAACTAAACGGCAAACAGGAGAAGAAAATCCCACATACATTCTCTACTTCTCAGCATAAAAAACAAGAGTCTCGTGAAGAGTTCAGCGATTGGCCTCATGGATTGCTAGCAATTGGAACTTTTGGCAACAATGAGATTAAAGATGAACAAGACATACAAGAGGAGGAGGATCCATCTTCTTCAGAAGAGATAGTTGATATCTCTCCTGAAGAAGTTGGTAAATTACAGAAAGAGTTAACAAAGCTTTTATCTCGAAAACCGAACGCCGAAAAGCAGGTTGCAGATCTTCCATTGGATAGATTTCTCAACTGTCCTTCAAGCTTGGAGGTTGACAGAAGAATCAGCAATCCACTTTGCAGTGATTTAGATGATAAAGATGAAGATATTGAAAGAACCATTGGTCTTATCATTGGGAAATGCAAAGACATTTGGGCTGATGTAATGGCTTCACTCCTTTACCACCACCAAGTTTGA

Coding sequence (CDS)

ATGAAGTTCTTCAGCTGGATGCAGACTAAACTAAACGGCAAACAGGAGAAGAAAATCCCACATACATTCTCTACTTCTCAGCATAAAAAACAAGAGTCTCGTGAAGAGTTCAGCGATTGGCCTCATGGATTGCTAGCAATTGGAACTTTTGGCAACAATGAGATTAAAGATGAACAAGACATACAAGAGGAGGAGGATCCATCTTCTTCAGAAGAGATAGTTGATATCTCTCCTGAAGAAGTTGGTAAATTACAGAAAGAGTTAACAAAGCTTTTATCTCGAAAACCGAACGCCGAAAAGCAGGTTGCAGATCTTCCATTGGATAGATTTCTCAACTGTCCTTCAAGCTTGGAGGTTGACAGAAGAATCAGCAATCCACTTTGCAGTGATTTAGATGATAAAGATGAAGATATTGAAAGAACCATTGGTCTTATCATTGGGAAATGCAAAGACATTTGGGCTGATGTAATGGCTTCACTCCTTTACCACCACCAAGTTTGA

Protein sequence

MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWADVMASLLYHHQV

Homology

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy Swiss-Prot
Match: A0A251PW43 (Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.2e-53
Identity = 114/163 (69.94%), Postives = 130/163 (79.75%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQH-KKQESREEFSDWPHGLLAIGTFGNNEIK--- 60
           MK F WMQ KLNGKQ  K P+T   + H  KQE REEFSDWPHGLLAIGTFGNN++K   
Sbjct: 1   MKLFGWMQNKLNGKQGNKKPNTVPITTHPAKQEPREEFSDWPHGLLAIGTFGNNDLKENA 60

Query: 61  -DEQDIQEEEDPSSSEEIVD-ISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCP 120
            + QDIQ  EDP+SSEEI+D  +PEEVGKL KELTKLL+RKPN EK++ADLPLDRFLNCP
Sbjct: 61  AESQDIQ--EDPTSSEEILDNFTPEEVGKLHKELTKLLTRKPNIEKEIADLPLDRFLNCP 120

Query: 121 SSLEVDRRISNPLCSDL--DDKDEDIERTIGLIIGKCKDIWAD 156
           SSLEVDRR SN LCSD   D KDEDIE+TI +I+G+CK+I  D
Sbjct: 121 SSLEVDRRNSNALCSDSADDHKDEDIEKTISVILGRCKEICGD 161

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy Swiss-Prot
Match: A0A072TLV8 (Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN=NGR PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.0e-51
Identity = 105/159 (66.04%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFG-NNEIKD-- 60
           MKFF+WMQ KL GKQE +  +T +++ + K E REEFSDWPH LLAIGTFG NNEI    
Sbjct: 1   MKFFNWMQNKLGGKQENRKSNTSTSTTYAKPEPREEFSDWPHSLLAIGTFGNNNEITQNI 60

Query: 61  EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120
           E    ++EDPSSSEE+ D +PEE+GKLQKELT+LL RKPN EK++++LPLDRFLNCPSSL
Sbjct: 61  ENQNTQQEDPSSSEEVPDFTPEEIGKLQKELTRLLRRKPNVEKEISELPLDRFLNCPSSL 120

Query: 121 EVDRRISNPLCSDL-DDKDEDIERTIGLIIGKCKDIWAD 156
           EVDRRISN LCS+   DKDEDIE+T+ +I+ KCKDI A+
Sbjct: 121 EVDRRISNALCSESGGDKDEDIEKTLSVILDKCKDICAE 159

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy Swiss-Prot
Match: Q5XVG3 (Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 8.0e-40
Identity = 99/178 (55.62%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNN----EIK 60
           MKFF WMQ KL+GKQE  I H  S S       REEF+DWPHGLLAIGTFGN     +  
Sbjct: 1   MKFFGWMQNKLHGKQE--ITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTL 60

Query: 61  DEQDIQEE----------------EDPSSSEEI-VDISPEEVGKLQKELTKLLS-----R 120
           D++ IQEE                ++ SSS+++  D +PEEVGKLQKELTKLL+     R
Sbjct: 61  DQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSKKR 120

Query: 121 KPNAEKQVADLPLDRFLNCPSSLEVDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDI 153
           K +  +++A+LPLDRFLNCPSSLEVDRRISN LC   D+K+EDIERTI +I+G+CK I
Sbjct: 121 KSDVNRELANLPLDRFLNCPSSLEVDRRISNALC---DEKEEDIERTISVILGRCKAI 173

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy Swiss-Prot
Match: Q58G53 (Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-38
Identity = 95/179 (53.07%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFG--------- 60
           MKFF WMQ KLNG    +   + ++S H KQE REEFSDWPH LLAIGTFG         
Sbjct: 1   MKFFGWMQNKLNG-DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVSEN 60

Query: 61  -----NNEIKDEQ----DIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQV 120
                + EI+ E+      ++EE+PSSS  + D +PEEVGKLQKEL KLLSR    +  V
Sbjct: 61  ESKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTKKRKSDV 120

Query: 121 -----ADLPLDRFLNCPSSLEVDRRISNPLCSDLD----DKDEDIERTIGLIIGKCKDI 153
                 +LPLDRFLNCPSSLEVDRRISN L + +D    +K+ED+ERTI +I+G+CK+I
Sbjct: 121 NRELMKNLPLDRFLNCPSSLEVDRRISNALSAVVDSSEENKEEDMERTINVILGRCKEI 178

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy Swiss-Prot
Match: Q69P88 (Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 43/105 (40.95%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQES---REEFSDWPHGLLAIGTFGNNEIKD 60
           MK FSW+  K++GKQE       S++ ++   S   ++EFSDWP  LLAIGTFGN +I++
Sbjct: 1   MKIFSWVANKISGKQEANRFPANSSAPYRANVSDCRKDEFSDWPQSLLAIGTFGNKQIEE 60

Query: 61  EQDIQEEED-PSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQ 102
              ++   D   S ++ V  + EEV K++KE   LL+ K  AE Q
Sbjct: 61  VAQVENSSDNVQSVQDTVKFTEEEVDKIRKEFETLLAIKDQAEAQ 105

[Close]

BLAST of Cp4.1LG12g09330 vs. NCBI nr
Match: XP_023547536.1 (uncharacterized protein LOC111806450 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311 bits (796), Expect = 6.17e-105
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD
Sbjct: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60

Query: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120
           IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD
Sbjct: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120

Query: 121 RRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           RRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD
Sbjct: 121 RRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155

[Close]

BLAST of Cp4.1LG12g09330 vs. NCBI nr
Match: XP_022953613.1 (uncharacterized protein LOC111456096 [Cucurbita moschata])

HSP 1 Score: 306 bits (785), Expect = 2.72e-103
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           MKFFSWMQTKLNGKQEKKIPHTFSTSQH KQESREEFSDWPHGLLAIGTFGNNEIKDEQD
Sbjct: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60

Query: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120
           IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD
Sbjct: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120

Query: 121 RRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           RRISNPLCSD DDKDEDIERTIGLIIGKCKDIWAD
Sbjct: 121 RRISNPLCSDSDDKDEDIERTIGLIIGKCKDIWAD 155

[Close]

BLAST of Cp4.1LG12g09330 vs. NCBI nr
Match: KAG6575434.1 (hypothetical protein SDJN03_26073, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (781), Expect = 3.98e-102
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           M+FFSWMQTKLNGKQEKKIPHTFSTSQH KQESREEFSDWPHGLLAIGTFGNNEIKDEQD
Sbjct: 1   MQFFSWMQTKLNGKQEKKIPHTFSTSQHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60

Query: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120
           IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD
Sbjct: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120

Query: 121 RRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           RRISNPLCSD DDKDEDIERTIGLIIGKCKDIWAD
Sbjct: 121 RRISNPLCSDSDDKDEDIERTIGLIIGKCKDIWAD 155

[Close]

BLAST of Cp4.1LG12g09330 vs. NCBI nr
Match: XP_022992360.1 (uncharacterized protein LOC111488695 [Cucurbita maxima])

HSP 1 Score: 299 bits (766), Expect = 2.51e-100
Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKK---IPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKD 60
           MKFFSWMQTKLNGKQE+K   IPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNN+IKD
Sbjct: 1   MKFFSWMQTKLNGKQEEKKKNIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNDIKD 60

Query: 61  EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120
           EQDIQEEEDPSSSE+IVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL
Sbjct: 61  EQDIQEEEDPSSSEQIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120

Query: 121 EVDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           EVDRRISNPLCSD DDKDEDIERTIGLIIGKCKDIWAD
Sbjct: 121 EVDRRISNPLCSDSDDKDEDIERTIGLIIGKCKDIWAD 158

[Close]

BLAST of Cp4.1LG12g09330 vs. NCBI nr
Match: XP_038899524.1 (protein DEEPER ROOTING 1 [Benincasa hispida])

HSP 1 Score: 277 bits (709), Expect = 1.17e-91
Identity = 143/157 (91.08%), Postives = 146/157 (92.99%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           MKF SWMQTKLNGKQEKKIP T STSQHKKQESREEFSDWPHGLLAIGTFGNNEIKD+ +
Sbjct: 1   MKFLSWMQTKLNGKQEKKIPDTLSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  IQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120
            Q  EEE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE
Sbjct: 61  RQDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           VDRRISNPLCSD DDKDEDIERTI LIIGKCKDI AD
Sbjct: 121 VDRRISNPLCSDSDDKDEDIERTISLIIGKCKDICAD 157

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy TrEMBL
Match: A0A6J1GNT0 (uncharacterized protein LOC111456096 OS=Cucurbita moschata OX=3662 GN=LOC111456096 PE=3 SV=1)

HSP 1 Score: 306 bits (785), Expect = 1.32e-103
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           MKFFSWMQTKLNGKQEKKIPHTFSTSQH KQESREEFSDWPHGLLAIGTFGNNEIKDEQD
Sbjct: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHNKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60

Query: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120
           IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD
Sbjct: 61  IQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLEVD 120

Query: 121 RRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           RRISNPLCSD DDKDEDIERTIGLIIGKCKDIWAD
Sbjct: 121 RRISNPLCSDSDDKDEDIERTIGLIIGKCKDIWAD 155

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy TrEMBL
Match: A0A6J1JVH6 (uncharacterized protein LOC111488695 OS=Cucurbita maxima OX=3661 GN=LOC111488695 PE=3 SV=1)

HSP 1 Score: 299 bits (766), Expect = 1.22e-100
Identity = 151/158 (95.57%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKK---IPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKD 60
           MKFFSWMQTKLNGKQE+K   IPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNN+IKD
Sbjct: 1   MKFFSWMQTKLNGKQEEKKKNIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNDIKD 60

Query: 61  EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120
           EQDIQEEEDPSSSE+IVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL
Sbjct: 61  EQDIQEEEDPSSSEQIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120

Query: 121 EVDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           EVDRRISNPLCSD DDKDEDIERTIGLIIGKCKDIWAD
Sbjct: 121 EVDRRISNPLCSDSDDKDEDIERTIGLIIGKCKDIWAD 158

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy TrEMBL
Match: A0A0A0K7Q1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448840 PE=3 SV=1)

HSP 1 Score: 273 bits (699), Expect = 1.88e-90
Identity = 142/158 (89.87%), Postives = 145/158 (91.77%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           MKFFSWMQTKLNGKQEKKIP T STS HKKQESREEFSDWPHGLLAIGTFGNNEIKD+ D
Sbjct: 1   MKFFSWMQTKLNGKQEKKIPDTISTSHHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSD 60

Query: 61  IQE---EEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120
            +E   EE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL
Sbjct: 61  QREDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSL 120

Query: 121 EVDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           EVDRRISNPL SD DDKDEDIERTI LIIGKCKDI AD
Sbjct: 121 EVDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICAD 158

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy TrEMBL
Match: A0A1S3CH46 (uncharacterized protein LOC103500678 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500678 PE=3 SV=1)

HSP 1 Score: 272 bits (696), Expect = 5.38e-90
Identity = 141/157 (89.81%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           MKFFSWMQTKLNGKQEKKIP T STS HKKQESREEFSDWPHGLLAIGTFGNNEIKD+ +
Sbjct: 1   MKFFSWMQTKLNGKQEKKIPDTISTSHHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  IQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120
            +  EEE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE
Sbjct: 61  RRDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           VDRRISNPL SD DDKDEDIERTI LIIGKCKDI AD
Sbjct: 121 VDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICAD 157

[Close]

BLAST of Cp4.1LG12g09330 vs. ExPASy TrEMBL
Match: A0A5A7UYW4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001370 PE=3 SV=1)

HSP 1 Score: 271 bits (692), Expect = 2.18e-89
Identity = 140/157 (89.17%), Postives = 145/157 (92.36%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNNEIKDEQD 60
           M+FFSWMQTKLNGKQEKKIP T STS HKKQESREEFSDWPHGLLAIGTFGNNEIKD+ +
Sbjct: 1   MQFFSWMQTKLNGKQEKKIPDTISTSHHKKQESREEFSDWPHGLLAIGTFGNNEIKDDSE 60

Query: 61  IQ--EEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120
            +  EEE+PSSSEEIVD SPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE
Sbjct: 61  RRDIEEENPSSSEEIVDFSPEEVGKLQKELTKLLSRKPNAEKQVADLPLDRFLNCPSSLE 120

Query: 121 VDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDIWAD 155
           VDRRISNPL SD DDKDEDIERTI LIIGKCKDI AD
Sbjct: 121 VDRRISNPLSSDSDDKDEDIERTISLIIGKCKDICAD 157

[Close]

BLAST of Cp4.1LG12g09330 vs. TAIR 10
Match: AT1G72490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17400.1); Has 75 Blast hits to 75 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 4; Plants - 58; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 164.9 bits (416), Expect = 5.7e-41
Identity = 99/178 (55.62%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFGNN----EIK 60
           MKFF WMQ KL+GKQE  I H  S S       REEF+DWPHGLLAIGTFGN     +  
Sbjct: 1   MKFFGWMQNKLHGKQE--ITHRPSISSASSHHPREEFNDWPHGLLAIGTFGNKKQTPQTL 60

Query: 61  DEQDIQEE----------------EDPSSSEEI-VDISPEEVGKLQKELTKLLS-----R 120
           D++ IQEE                ++ SSS+++  D +PEEVGKLQKELTKLL+     R
Sbjct: 61  DQEVIQEETVSNLHVEGRQAQDTDQELSSSDDLEEDFTPEEVGKLQKELTKLLTRRSKKR 120

Query: 121 KPNAEKQVADLPLDRFLNCPSSLEVDRRISNPLCSDLDDKDEDIERTIGLIIGKCKDI 153
           K +  +++A+LPLDRFLNCPSSLEVDRRISN LC   D+K+EDIERTI +I+G+CK I
Sbjct: 121 KSDVNRELANLPLDRFLNCPSSLEVDRRISNALC---DEKEEDIERTISVILGRCKAI 173

[Close]

BLAST of Cp4.1LG12g09330 vs. TAIR 10
Match: AT1G17400.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 95/179 (53.07%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 1   MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHGLLAIGTFG--------- 60
           MKFF WMQ KLNG    +   + ++S H KQE REEFSDWPH LLAIGTFG         
Sbjct: 1   MKFFGWMQNKLNG-DHNRTSTSSASSHHVKQEPREEFSDWPHALLAIGTFGTTSNSVSEN 60

Query: 61  -----NNEIKDEQ----DIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSRKPNAEKQV 120
                + EI+ E+      ++EE+PSSS  + D +PEEVGKLQKEL KLLSR    +  V
Sbjct: 61  ESKNVHEEIEAEKKCTAQSEQEEEPSSSVNLEDFTPEEVGKLQKELMKLLSRTKKRKSDV 120

Query: 121 -----ADLPLDRFLNCPSSLEVDRRISNPLCSDLD----DKDEDIERTIGLIIGKCKDI 153
                 +LPLDRFLNCPSSLEVDRRISN L + +D    +K+ED+ERTI +I+G+CK+I
Sbjct: 121 NRELMKNLPLDRFLNCPSSLEVDRRISNALSAVVDSSEENKEEDMERTINVILGRCKEI 178

[Close]

BLAST of Cp4.1LG12g09330 vs. TAIR 10
Match: AT1G19115.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.6e-05
Identity = 33/97 (34.02%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 1  MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHG---LLAIGTFGNNEIKD 60
          MK FSW+Q KL+GK  K++P + S+ +       +E    P      LAIGT GNN    
Sbjct: 1  MKIFSWVQRKLSGK--KRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIFPK 60

Query: 61 EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSR 95
          ++  +EEE+  SS++I  ++ +     +K L+ LL +
Sbjct: 61 QE--EEEEETDSSKDITPVNTDVTIGKKKSLSFLLKK 93

[Close]

BLAST of Cp4.1LG12g09330 vs. TAIR 10
Match: AT1G19115.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.6e-05
Identity = 33/97 (34.02%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 1  MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHG---LLAIGTFGNNEIKD 60
          MK FSW+Q KL+GK  K++P + S+ +       +E    P      LAIGT GNN    
Sbjct: 1  MKIFSWVQRKLSGK--KRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIFPK 60

Query: 61 EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSR 95
          ++  +EEE+  SS++I  ++ +     +K L+ LL +
Sbjct: 61 QE--EEEEETDSSKDITPVNTDVTIGKKKSLSFLLKK 93

[Close]

BLAST of Cp4.1LG12g09330 vs. TAIR 10
Match: AT1G19115.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.6e-05
Identity = 33/97 (34.02%), Postives = 53/97 (54.64%), Query Frame = 0


Query: 1  MKFFSWMQTKLNGKQEKKIPHTFSTSQHKKQESREEFSDWPHG---LLAIGTFGNNEIKD 60
          MK FSW+Q KL+GK  K++P + S+ +       +E    P      LAIGT GNN    
Sbjct: 1  MKIFSWVQRKLSGK--KRVPTSDSSQEPSSPPLSKEVQGLPQDEETFLAIGTLGNNIFPK 60

Query: 61 EQDIQEEEDPSSSEEIVDISPEEVGKLQKELTKLLSR 95
          ++  +EEE+  SS++I  ++ +     +K L+ LL +
Sbjct: 61 QE--EEEEETDSSKDITPVNTDVTIGKKKSLSFLLKK 93

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A251PW43	2.2e-53	69.94	Protein DEEPER ROOTING 1 OS=Prunus persica OX=3760 GN=DRO1 PE=2 SV=1	[more]
A0A072TLV8	2.0e-51	66.04	Protein NEGATIVE GRAVITROPIC RESPONSE OF ROOTS OS=Medicago truncatula OX=3880 GN...	[more]
Q5XVG3	8.0e-40	55.62	Protein LAZY 4 OS=Arabidopsis thaliana OX=3702 GN=LAZY4 PE=1 SV=1	[more]
Q58G53	5.7e-38	53.07	Protein LAZY 2 OS=Arabidopsis thaliana OX=3702 GN=LAZY2 PE=2 SV=1	[more]
Q69P88	1.6e-11	40.95	Protein DEEPER ROOTING 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DRO1 PE=1 S...	[more]

BLAST of Cp4.1LG12g09330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547536.1	6.17e-105	100.00	uncharacterized protein LOC111806450 [Cucurbita pepo subsp. pepo]	[more]
XP_022953613.1	2.72e-103	98.71	uncharacterized protein LOC111456096 [Cucurbita moschata]	[more]
KAG6575434.1	3.98e-102	98.06	hypothetical protein SDJN03_26073, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022992360.1	2.51e-100	95.57	uncharacterized protein LOC111488695 [Cucurbita maxima]	[more]
XP_038899524.1	1.17e-91	91.08	protein DEEPER ROOTING 1 [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g09330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNT0	1.32e-103	98.71	uncharacterized protein LOC111456096 OS=Cucurbita moschata OX=3662 GN=LOC1114560...	[more]
A0A6J1JVH6	1.22e-100	95.57	uncharacterized protein LOC111488695 OS=Cucurbita maxima OX=3661 GN=LOC111488695...	[more]
A0A0A0K7Q1	1.88e-90	89.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448840 PE=3 SV=1	[more]
A0A1S3CH46	5.38e-90	89.81	uncharacterized protein LOC103500678 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7UYW4	2.18e-89	89.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Cp4.1LG12g09330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72490.1	5.7e-41	55.62	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G17400.1	4.1e-39	53.07	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G19115.1	6.6e-05	34.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.2	6.6e-05	34.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G19115.3	6.6e-05	34.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..74
IPR044683	LAZY family	PANTHER	PTHR34045	OS03G0406300 PROTEIN	coord: 3..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09330.1	Cp4.1LG12g09330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009630	gravitropism
biological_process	GO:0040008	regulation of growth