Cp4.1LG12g09000 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09000
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Eukaryotic initiation factor 4A
Location	Cp4.1LG12: 6047211 .. 6049731 (+)
RNA-Seq Expression	Cp4.1LG12g09000
Synteny	Cp4.1LG12g09000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACACCCTTCCCTTTCGTTTCCCTCTTTCGCTGCGCTTTGCCCAACACTCGCCTCCAACTCCACGGATCAGATCCGAGGAGTTTGGCAAACCCTAGCGCCCTTTCTTCAATCTCCTTCTGCTTCAACTTCCTCTCTGTTCTTGTCGATCCGCAGGTCTGATTCGCTCCTTTCTCTTTTGATTTTGCTTCCTTTTCTACTAATTTCACTGGACGAAGATGGTTGTATGTATGTGTGCCTCTTTGATTATCTTTTTCTTTAGGTTTTCTTTCCTTTTTGTTTTGTTATGTCGGGATTTGACGCTAATCTGGACTTGTGGTTGTAGGTCGAGTTCCTTATTCTCTTTGTTTCTTTGTTTGTTTATGGGTTGTAATTGTTTCTTTAATCCACATGAATCTGTTTCTACTTATTTAGACTAGGCCTATTCTTTGCTTTTTCGTATGGAACGCAGTGTAATTCATACAGGAATTCTTGTTTATACTTTGTTTTGGGGTTTTTTTTAATGATTATTTTAACAGCATCTGCTTTGGAAAAGGTTAAAGCGGCGTCTGATTTTCTTTTCTTTTTTGAGAAAAAAATATCAGATAGCCCTGACTCCTTTTCCTACATTGAGACAGAATTTTAATGCTTGGTATCCTCTTTATAAGGATTGCAAGTTTGGCTTTTCTGTTACAGATTTCCTTTCTGACGAATTCGTAATGTTCTGTTTATCCGTTGGTCGGGTTGATAAAATGATTATGAATTTATTATTTCCATGGCTGCGTAATTTCGGGTTTTTTGATTTGTTTGTTCGTCTTAGTGTTTCCTTTATGTAGTGATCTCTTATATTTTGCACCATTTTCCACTTACAGCCATGGCAGGTTTGGCTCCAGAAGGATCCCAGTTTGATTCTCGCCAATATGATACTAAAATGAATGAGATGTAAGTGATTCTCTTATTTCCTTTTTTCATTATTGTCCTTTGAGATTTCTTTTTGCTTCCATGTCTATGCGCTAATTCAGTATTATTTTCTTGCTCCTCCTTGCAGTCTTTCGGCAGAAGGCCAGGAATTTTTTACCTCATATGATGAAGTTTATGAAAGTTTTGATTCGATGGGGCTGCAAGAAAACCTCCTTAGAGGCATTTATGCCTATGGTATATACTTATTTGCTTCATTTTTATTTCTTTTGATTTTTGCTCGTTTTGTCTCAAATATTCTGTGTAATTCTTTATCTAATTCCAAGGGTTTCCTCCCTTCTTTAAGGTTTCGAGAAGCCATCTGCAATTCAGCAAAGAGGTATTGTTCCCTTCTGCAAAGGCCTTGATGTGATTCAGCAGGCTCAGTCTGGAACTGGGAAGACTGCAACCTTTTGCTCTGGAATATTGCAGCAACTTGATTATGGTCTAGTCCAGTGCCAGGCTTTAGTTTTGGCTCCGACTAGGGAGCTTGCTCAACAAATTGAGAAGGTTATGAGAGCTCTTGGAGATTATCTTGGTGTTAAGGTACATGCTTGTGTGGGAGGGACAAGCGTCCGTGAGGATCAACGCATTCTTCAAGCTGGTGTTCACGTCGTAGTTGGAACACCTGGTCGTGTGTTTGACATGTTAAGGAGGCAATCTCTTCGTCCGGATTCTATTAAGATGTTTGTATTGGATGAAGCTGATGAAATGCTTTCTCGAGGTTTCAAAGATCAGGTATCTTGTTGAACCAGCATTTTCATGATGATTGTGTTTTGTAGGGAGGAATTTAACATAAATATTGTATTATTATTAGGTTCATCAGTGCTGAATTTGTTCCTCTTGCCTTATGGAAGCCTTGCTTTGTATTTGTATTTTTTTTTCTCTTCATTTGTCATAGAATGAAGATTTCTAATGGCTTTTTATGTTACTGCTTTTTGTGGTGTTAGATTTATGACATTTTCCAGCTGTTGCCATCAAAAATTCAAGTTGGGGTGTTCTCAGCCACAATGCCACCCGAAGCTTTGGAGATCACTAGGAAATTCATGAACAAGCCTGTCAGGATCTTGGTAAAGCGTGATGAGCTTACTTTGGAGGGTATCAAACAATTTTACGTAAATGTTGACAAGGAAGATTGGAAACTTGAAACGTTATGTGATCTCTACGAGACTCTGGCTATCACTCAAAGTGTCATCTTTGTTAACACACGTCGCAAGGTCGATTGGCTTACAGACAAGATGAGAAGCCGAGACCATACCGTATCGGCCACCCACGGTGACATGGACCAGAACACTCGAGATATAATCATGCGTGAATTTCGGTCTGGCTCGTCTCGTGTTCTTATCACAACTGACTTGTTAGCTCGAGGTATTGATGTTCAGCAAGTCTCCCTTGTTATAAATTATGATTTGCCAACCCAACCAGAGAATTATCTTCATCGAATTGGTCGAAGTGGGCGTTTCGGAAGAAAAGGTGTGGCCATTAATTTTGTTACAAGCGATGATGAGAGAATGCTTTTTGATATTCAGAAGTTCTATAATGTGGTCGTTGAGGAGCTGCCAGCCAATGTTGCTGATCTCCTATGA

mRNA sequence

TAACACCCTTCCCTTTCGTTTCCCTCTTTCGCTGCGCTTTGCCCAACACTCGCCTCCAACTCCACGGATCAGATCCGAGGAGTTTGGCAAACCCTAGCGCCCTTTCTTCAATCTCCTTCTGCTTCAACTTCCTCTCTGTTCTTGTCGATCCGCAGCCATGGCAGGTTTGGCTCCAGAAGGATCCCAGTTTGATTCTCGCCAATATGATACTAAAATGAATGAGATTCTTTCGGCAGAAGGCCAGGAATTTTTTACCTCATATGATGAAGTTTATGAAAGTTTTGATTCGATGGGGCTGCAAGAAAACCTCCTTAGAGGCATTTATGCCTATGGTTTCGAGAAGCCATCTGCAATTCAGCAAAGAGGTATTGTTCCCTTCTGCAAAGGCCTTGATGTGATTCAGCAGGCTCAGTCTGGAACTGGGAAGACTGCAACCTTTTGCTCTGGAATATTGCAGCAACTTGATTATGGTCTAGTCCAGTGCCAGGCTTTAGTTTTGGCTCCGACTAGGGAGCTTGCTCAACAAATTGAGAAGGTTATGAGAGCTCTTGGAGATTATCTTGGTGTTAAGGTACATGCTTGTGTGGGAGGGACAAGCGTCCGTGAGGATCAACGCATTCTTCAAGCTGGTGTTCACGTCGTAGTTGGAACACCTGGTCGTGTGTTTGACATGTTAAGGAGGCAATCTCTTCGTCCGGATTCTATTAAGATGTTTGTATTGGATGAAGCTGATGAAATGCTTTCTCGAGGTTTCAAAGATCAGCAAGTCTCCCTTGTTATAAATTATGATTTGCCAACCCAACCAGAGAATTATCTTCATCGAATTGGTCGAAGTGGGCGTTTCGGAAGAAAAGGTGTGGCCATTAATTTTGTTACAAGCGATGATGAGAGAATGCTTTTTGATATTCAGAAGTTCTATAATGTGGTCGTTGAGGAGCTGCCAGCCAATGTTGCTGATCTCCTATGA

Coding sequence (CDS)

ATGGCAGGTTTGGCTCCAGAAGGATCCCAGTTTGATTCTCGCCAATATGATACTAAAATGAATGAGATTCTTTCGGCAGAAGGCCAGGAATTTTTTACCTCATATGATGAAGTTTATGAAAGTTTTGATTCGATGGGGCTGCAAGAAAACCTCCTTAGAGGCATTTATGCCTATGGTTTCGAGAAGCCATCTGCAATTCAGCAAAGAGGTATTGTTCCCTTCTGCAAAGGCCTTGATGTGATTCAGCAGGCTCAGTCTGGAACTGGGAAGACTGCAACCTTTTGCTCTGGAATATTGCAGCAACTTGATTATGGTCTAGTCCAGTGCCAGGCTTTAGTTTTGGCTCCGACTAGGGAGCTTGCTCAACAAATTGAGAAGGTTATGAGAGCTCTTGGAGATTATCTTGGTGTTAAGGTACATGCTTGTGTGGGAGGGACAAGCGTCCGTGAGGATCAACGCATTCTTCAAGCTGGTGTTCACGTCGTAGTTGGAACACCTGGTCGTGTGTTTGACATGTTAAGGAGGCAATCTCTTCGTCCGGATTCTATTAAGATGTTTGTATTGGATGAAGCTGATGAAATGCTTTCTCGAGGTTTCAAAGATCAGCAAGTCTCCCTTGTTATAAATTATGATTTGCCAACCCAACCAGAGAATTATCTTCATCGAATTGGTCGAAGTGGGCGTTTCGGAAGAAAAGGTGTGGCCATTAATTTTGTTACAAGCGATGATGAGAGAATGCTTTTTGATATTCAGAAGTTCTATAATGTGGTCGTTGAGGAGCTGCCAGCCAATGTTGCTGATCTCCTATGA

Protein sequence

MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDSIKMFVLDEADEMLSRGFKDQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNVVVEELPANVADLL

Homology

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy Swiss-Prot
Match: Q40465 (Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 453.8 bits (1166), Expect = 1.4e-126
Identity = 253/413 (61.26%), Postives = 261/413 (63.20%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD KM E+L  E QEFFTSYDEVYESFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQQEFFTSYDEVYESFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLVECQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D+IKMFVLDEADEMLSRGFKD                                       
Sbjct: 181 DNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy Swiss-Prot
Match: Q40467 (Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 1.8e-126
Identity = 252/413 (61.02%), Postives = 261/413 (63.20%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD KM E+L  E +EFFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D IKMFVLDEADEMLSRGFKD                                       
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy Swiss-Prot
Match: P41381 (Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.2e-125
Identity = 247/413 (59.81%), Postives = 266/413 (64.41%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MA LAP+G+QFD+RQYD+KMN++L+A+G++FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MARLAPDGAQFDARQYDSKMNDLLAADGKDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL AGVHV+VGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAAGVHVIVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D ++MFVLDEADEMLSRGFKD                                       
Sbjct: 181 DYLRMFVLDEADEMLSRGFKDQIYDIFQMLPTKVQVGVFSATMPPEALDITRKFMNKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy Swiss-Prot
Match: P41382 (Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.5e-125
Identity = 251/413 (60.77%), Postives = 260/413 (62.95%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD KM E+L  E +EFFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D IKMFVLDEADEMLSRGFKD                                       
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy Swiss-Prot
Match: Q40470 (Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 446.8 bits (1148), Expect = 1.7e-124
Identity = 249/413 (60.29%), Postives = 259/413 (62.71%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD KM E+L  E +EFFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDAKMTELLGTEQEEFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY LV+CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYSLVECQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D IKMFVLDEADEMLSRGFKD                                       
Sbjct: 181 DHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDDVTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. NCBI nr
Match: GAY38506.1 (hypothetical protein CUMW_037280, partial [Citrus unshiu])

HSP 1 Score: 499 bits (1284), Expect = 1.21e-176
Identity = 258/313 (82.43%), Postives = 266/313 (84.98%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYDTKMNE+LS +GQ+FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------------- 240
           D IKMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQNTRDIIMREFRSGSSRVLITTDLLA 240

Query: 241 ------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNV 269
                 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT DDERMLFDIQKFYNV
Sbjct: 241 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 300

[Close]

BLAST of Cp4.1LG12g09000 vs. NCBI nr
Match: KAF4375718.1 (hypothetical protein F8388_014440 [Cannabis sativa])

HSP 1 Score: 487 bits (1253), Expect = 3.98e-172
Identity = 248/296 (83.78%), Postives = 261/296 (88.18%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD+KM+E+L ++GQ+FFTSYDEV++SFD MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDSKMSELLGSDGQDFFTSYDEVHDSFDVMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL++CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLLECQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------QVSLVIN 240
           D+IKMFVLDEADEMLSRGFKDQ                               QVSLVIN
Sbjct: 181 DNIKMFVLDEADEMLSRGFKDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN 240

Query: 241 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNVVVEELPANV 265
           YDLPTQPENYLHRIGRSGRFGRKGVAINFVT DDERMLFDIQKFYNVVVEELPANV
Sbjct: 241 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPANV 296

[Close]

BLAST of Cp4.1LG12g09000 vs. NCBI nr
Match: KHG04102.1 (Eukaryotic initiation factor 4A-14 [Gossypium arboreum])

HSP 1 Score: 487 bits (1253), Expect = 6.37e-172
Identity = 251/313 (80.19%), Postives = 262/313 (83.71%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD KM E+L  +G +FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDQKMTELLQTDGDDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------------- 240
           D IKMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKIQNTRDVIMREFRSGSSRVLITTDLLA 240

Query: 241 ------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNV 269
                 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DDERMLFDIQKFYNV
Sbjct: 241 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNV 300

[Close]

BLAST of Cp4.1LG12g09000 vs. NCBI nr
Match: PQP97349.1 (hypothetical protein Pyn_09081 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 486 bits (1251), Expect = 2.37e-171
Identity = 254/330 (76.97%), Postives = 265/330 (80.30%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAG+APEGSQFD++QYDTKM+E+LS +GQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF
Sbjct: 1   MAGVAPEGSQFDAKQYDTKMSELLSTDGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------------- 240
           D IKMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQMRSRDHTVSATHGDMDQNTRDIIMR 240

Query: 241 -----------------------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 269
                                  QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV
Sbjct: 241 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 300

[Close]

BLAST of Cp4.1LG12g09000 vs. NCBI nr
Match: RYR30123.1 (hypothetical protein Ahy_B01g054962 isoform D [Arachis hypogaea])

HSP 1 Score: 484 bits (1247), Expect = 9.31e-171
Identity = 246/300 (82.00%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAG APEG+QFD+RQ+D KMN++L+A+GQ+FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 30  MAGAAPEGTQFDARQFDAKMNDLLTADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 89

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTREL
Sbjct: 90  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTREL 149

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSL+P
Sbjct: 150 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLQP 209

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------QVSLVIN 240
           D IKMFVLDEADEMLSRGFKDQ                               QVSLVIN
Sbjct: 210 DHIKMFVLDEADEMLSRGFKDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN 269

Query: 241 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNVVVEELPANVADLL 269
           YDLPTQPENYLHRIGRSGRFGRKGVAINFVT DDERMLFDIQKFYNV +EELPANVA+LL
Sbjct: 270 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVQIEELPANVAELL 329

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy TrEMBL
Match: A0A2H5NE91 (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_037280 PE=3 SV=1)

HSP 1 Score: 499 bits (1284), Expect = 5.85e-177
Identity = 258/313 (82.43%), Postives = 266/313 (84.98%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYDTKMNE+LS +GQ+FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------------- 240
           D IKMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQNTRDIIMREFRSGSSRVLITTDLLA 240

Query: 241 ------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNV 269
                 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT DDERMLFDIQKFYNV
Sbjct: 241 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy TrEMBL
Match: A0A7J6FYE9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_014440 PE=3 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 1.93e-172
Identity = 248/296 (83.78%), Postives = 261/296 (88.18%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD+KM+E+L ++GQ+FFTSYDEV++SFD MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDSKMSELLGSDGQDFFTSYDEVHDSFDVMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL++CQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLLECQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------QVSLVIN 240
           D+IKMFVLDEADEMLSRGFKDQ                               QVSLVIN
Sbjct: 181 DNIKMFVLDEADEMLSRGFKDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN 240

Query: 241 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNVVVEELPANV 265
           YDLPTQPENYLHRIGRSGRFGRKGVAINFVT DDERMLFDIQKFYNVVVEELPANV
Sbjct: 241 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVVVEELPANV 296

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy TrEMBL
Match: A0A0B0MUP2 (Eukaryotic initiation factor 4A-14 OS=Gossypium arboreum OX=29729 GN=F383_28812 PE=3 SV=1)

HSP 1 Score: 487 bits (1253), Expect = 3.09e-172
Identity = 251/313 (80.19%), Postives = 262/313 (83.71%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAGLAPEGSQFD+RQYD KM E+L  +G +FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGLAPEGSQFDARQYDQKMTELLQTDGDDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQ+GVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQSGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------------- 240
           D IKMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKIQNTRDVIMREFRSGSSRVLITTDLLA 240

Query: 241 ------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNV 269
                 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT+DDERMLFDIQKFYNV
Sbjct: 241 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQKFYNV 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy TrEMBL
Match: A0A314XWS9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_09081 PE=3 SV=1)

HSP 1 Score: 486 bits (1251), Expect = 1.15e-171
Identity = 254/330 (76.97%), Postives = 265/330 (80.30%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAG+APEGSQFD++QYDTKM+E+LS +GQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF
Sbjct: 1   MAGVAPEGSQFDAKQYDTKMSELLSTDGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VQCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------------- 240
           D IKMFVLDEADEMLSRGFKDQ                                      
Sbjct: 181 DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQMRSRDHTVSATHGDMDQNTRDIIMR 240

Query: 241 -----------------------QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 269
                                  QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV
Sbjct: 241 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 300

[Close]

BLAST of Cp4.1LG12g09000 vs. ExPASy TrEMBL
Match: A0A445AUQ2 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g054962 PE=3 SV=1)

HSP 1 Score: 484 bits (1247), Expect = 4.51e-171
Identity = 246/300 (82.00%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAG APEG+QFD+RQ+D KMN++L+A+GQ+FFTSYDEVY+SFD+MGLQENLLRGIYAYGF
Sbjct: 30  MAGAAPEGTQFDARQFDAKMNDLLTADGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGF 89

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY L +CQALVLAPTREL
Sbjct: 90  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYSLTECQALVLAPTREL 149

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSL+P
Sbjct: 150 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLQP 209

Query: 181 DSIKMFVLDEADEMLSRGFKDQ-------------------------------QVSLVIN 240
           D IKMFVLDEADEMLSRGFKDQ                               QVSLVIN
Sbjct: 210 DHIKMFVLDEADEMLSRGFKDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN 269

Query: 241 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTSDDERMLFDIQKFYNVVVEELPANVADLL 269
           YDLPTQPENYLHRIGRSGRFGRKGVAINFVT DDERMLFDIQKFYNV +EELPANVA+LL
Sbjct: 270 YDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQKFYNVQIEELPANVAELL 329

[Close]

BLAST of Cp4.1LG12g09000 vs. TAIR 10
Match: AT1G54270.1 (eif4a-2 )

HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-122
Identity = 245/413 (59.32%), Postives = 259/413 (62.71%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAG APEG+QFD+RQ+D ++NE+L  +  EFFTSYDEV+ESFD+MGLQENLLRGIYAYGF
Sbjct: 1   MAGSAPEGTQFDTRQFDQRLNEVLDGQ-DEFFTSYDEVHESFDAMGLQENLLRGIYAYGF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D IKMFVLDEADEMLSRGFKD                                       
Sbjct: 181 DCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. TAIR 10
Match: AT3G13920.1 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 436.4 bits (1121), Expect = 1.6e-122
Identity = 247/414 (59.66%), Postives = 262/414 (63.29%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQ-EFFTSYDEVYESFDSMGLQENLLRGIYAYG 60
           MAG APEG+QFD+RQ+D K+NE+L  EGQ EFFTSYD+V+ESFD+MGLQENLLRGIYAYG
Sbjct: 1   MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 60

Query: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 120
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 120

Query: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180
           LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 180

Query: 181 PDSIKMFVLDEADEMLSRGFKD-------------------------------------- 240
            D+IKMFVLDEADEMLSRGFKD                                      
Sbjct: 181 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

[Close]

BLAST of Cp4.1LG12g09000 vs. TAIR 10
Match: AT1G54270.2 (eif4a-2 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 240/413 (58.11%), Postives = 254/413 (61.50%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGF 60
           MAG APEG+QFD+RQ+D ++NE+L  +  EFFTSYDEV+ESFD+MGLQENLLR     GF
Sbjct: 1   MAGSAPEGTQFDTRQFDQRLNEVLDGQ-DEFFTSYDEVHESFDAMGLQENLLR-----GF 60

Query: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTREL 120
           EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L+QCQALVLAPTREL
Sbjct: 61  EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTREL 120

Query: 121 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180
           AQQIEKVMRALGDY GVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP
Sbjct: 121 AQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRP 180

Query: 181 DSIKMFVLDEADEMLSRGFKD--------------------------------------- 240
           D IKMFVLDEADEMLSRGFKD                                       
Sbjct: 181 DCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPVR 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 ILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR 300

[Close]

BLAST of Cp4.1LG12g09000 vs. TAIR 10
Match: AT3G13920.4 (eukaryotic translation initiation factor 4A1 )

HSP 1 Score: 419.5 bits (1077), Expect = 2.1e-117
Identity = 242/414 (58.45%), Postives = 257/414 (62.08%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQ-EFFTSYDEVYESFDSMGLQENLLRGIYAYG 60
           MAG APEG+QFD+RQ+D K+NE+L  EGQ EFFTSYD+V+ESFD+MGLQENLLR     G
Sbjct: 1   MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLR-----G 60

Query: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 120
           FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L+QCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 120

Query: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180
           LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDML+RQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 180

Query: 181 PDSIKMFVLDEADEMLSRGFKD-------------------------------------- 240
            D+IKMFVLDEADEMLSRGFKD                                      
Sbjct: 181 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

[Close]

BLAST of Cp4.1LG12g09000 vs. TAIR 10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein )

HSP 1 Score: 412.1 bits (1058), Expect = 3.3e-115
Identity = 232/414 (56.04%), Postives = 255/414 (61.59%), Query Frame = 0


Query: 1   MAGLAPEGSQFDSRQYDTKMNEILSAEGQE-FFTSYDEVYESFDSMGLQENLLRGIYAYG 60
           MAG+A +G+Q+D RQ+DTKMN IL  EG+E F+T+YDEV +SFD+M LQ +LLRGIYAYG
Sbjct: 1   MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60

Query: 61  FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRE 120
           FEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD  LVQCQALVLAPTRE
Sbjct: 61  FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120

Query: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 180
           LAQQIEKVMRALGDYLGVK  ACVGGTSVREDQR+LQ+GVHVVVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180

Query: 181 PDSIKMFVLDEADEMLSRGFKD-------------------------------------- 240
            D+IKMFVLDEADEMLSRGFKD                                      
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240

Query: 241 ------------------------------------------------------------ 270
                                                                       
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40465	1.4e-126	61.26	Eukaryotic initiation factor 4A-11 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40467	1.8e-126	61.02	Eukaryotic initiation factor 4A-14 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P41381	1.2e-125	59.81	Eukaryotic initiation factor 4A-8 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
P41382	1.5e-125	60.77	Eukaryotic initiation factor 4A-10 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
Q40470	1.7e-124	60.29	Eukaryotic initiation factor 4A-7 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]

BLAST of Cp4.1LG12g09000 vs. NCBI nr


Match Name	E-value	Identity	Description
GAY38506.1	1.21e-176	82.43	hypothetical protein CUMW_037280, partial [Citrus unshiu]	[more]
KAF4375718.1	3.98e-172	83.78	hypothetical protein F8388_014440 [Cannabis sativa]	[more]
KHG04102.1	6.37e-172	80.19	Eukaryotic initiation factor 4A-14 [Gossypium arboreum]	[more]
PQP97349.1	2.37e-171	76.97	hypothetical protein Pyn_09081 [Prunus yedoensis var. nudiflora]	[more]
RYR30123.1	9.31e-171	82.00	hypothetical protein Ahy_B01g054962 isoform D [Arachis hypogaea]	[more]

BLAST of Cp4.1LG12g09000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2H5NE91	5.85e-177	82.43	Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_037280 PE=3...	[more]
A0A7J6FYE9	1.93e-172	83.78	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_014440 PE=3 SV=1	[more]
A0A0B0MUP2	3.09e-172	80.19	Eukaryotic initiation factor 4A-14 OS=Gossypium arboreum OX=29729 GN=F383_28812 ...	[more]
A0A314XWS9	1.15e-171	76.97	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_090...	[more]
A0A445AUQ2	4.51e-171	82.00	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B01g054962 PE=3 SV=1	[more]

BLAST of Cp4.1LG12g09000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G54270.1	1.6e-122	59.32	eif4a-2	[more]
AT3G13920.1	1.6e-122	59.66	eukaryotic translation initiation factor 4A1	[more]
AT1G54270.2	2.1e-117	58.11	eif4a-2	[more]
AT3G13920.4	2.1e-117	58.45	eukaryotic translation initiation factor 4A1	[more]
AT1G72730.1	3.3e-115	56.04	DEA(D/H)-box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 125..230 e-value: 9.7E-6 score: 35.1
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 101..269 score: 16.070919
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 59..253 e-value: 5.0E-34 score: 129.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 71..227 score: 21.85784
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 10..225 e-value: 1.5E-54 score: 186.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 194..267
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..210
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 65..206 e-value: 7.0E-35 score: 120.4
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 24..202
None	No IPR available	PANTHER	PTHR24031:SF735	EUKARYOTIC INITIATION FACTOR 4A-2	coord: 202..269
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 202..269
None	No IPR available	PANTHER	PTHR24031:SF735	EUKARYOTIC INITIATION FACTOR 4A-2	coord: 24..202
None	No IPR available	CDD	cd18785	SF2_C	coord: 194..239 e-value: 0.00380846 score: 33.4465
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 187..195
IPR014014	RNA helicase, DEAD-box type, Q motif	PROSITE	PS51195	Q_MOTIF	coord: 40..68 score: 10.720899

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09000.1	Cp4.1LG12g09000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0003676	nucleic acid binding