Cp4.1LG12g07860 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGTATCTGAGAGCAGAAATTCTCAGTAGGAAAGAACTAGGTGTTGATTCACCTGGGTTTGTCCATGACGCTTTGGGGCGGTGCCCCATATCCCTACAAGCCCTGATACTGAATCGACTTTAGACTAGCTTTACATTACAAAATACCCATCGGAGAGTTCGATGGAAGAACCCAAAGATGTGTTCAGCTTGATTTGTTGGTTCACTTCGTCATCTTATGATTTGAAATTCGATTCCGTTCACATAAACAACTACGTTCTTGCTTGGTGAGTCCCTTCGTTTGCCTATCTTTGAAGATCACGAATCAGGGAAAACTGACAATATCTACTAACGGTGGTGATTATGATTATGCCATGAAGACAAAGCTGACAATATCTACTAACGGTGGTGATTATGATTATGCCATGAAGTGGGGACGGCCTGACAAGTATCCGAGTGGGCACCTATAATTTATTCCTCATTTAAAGCACAATTATAAAAGCAAACGATCCCCCAAAATTCAGCATTGAACGAACGAGAAAGGGTTAGAGAAGAACAAAAGCTCGACACGTCTGGTTAGGCCCAACTGTTCACCTAAACAAAACGTTTAGAATTTCGGGTTTCTTTTTTAACGGATTTTCGTCGAATTTCTCTTCCAAATCCCGTTTTGTTCACAGTATCTTTTCTTATCTTGGGATCTTGAACACCACCAAAATTCTCGCCCCTTTTTGTAGCCGTCTCAGGAGGAATCAACACAGTTTTTTTTTCTTATTTATAATCTTTTTGTTCTTGCAGTGTTGGCCCATACTCTGAACTCCTCTGCCCATCGTTCTTGGAGCTTTTGTACTCTGTAATGGCGTCCTGTAAGTGTTTCTTTCTGCCATTCATGGTTCTTTTTAGTTTTGTTTTATTTACTAGTCTCGCGCATGGGTTATCTGTGTTGAGTTTTGTTCTGATTCTTTTCTTGGTAATGATGAAGCGATAATTCTTGAATTCTTTCAAAATCATGCTATGATGATGGATTTTAATGAATGTATATGATTTCGAAGTTCTTTTCTGTATTCCGCACTTAACCCGAGGGTTTGAGTTTCAATGATATGAATGGGGGATGAGAATGAGAATGAGAATGATCGAATCTTCTTGATATACAAATTTAAGTATAAAGATTGGGATGAGATTCTTAGGGATGAGATTCTTACTTCGTTTTCTTTTATTATGATCATAATTATAGTTTCTCTGCTGCTGTTGTTGCTGTGCTCCTCGTATTGCAGGCAGCTTGAGAACTGCAGACTTTAAAGTCTTCAGGTTGGATGTTTGTAGGGGAAGAGTCTCTACTTTGCCATCTTGTAGCTTAAGAAATTGGAGCAGGACACCGCAGCGATATTCGAGTTTGATAATATCATGTTCGTCTCGAAGAGATTTGCGTGCTTGTTGTAATGCATCGCCTGAGACCCGGAGTATGTGTTTATGTTACTTGTAATCTTTTCTTGAAGCCCAACATTATGTAATTGTTGTCAAAAGTCAGTTTTTTTTGTTAGATTCCACATCGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGTAGACGCGTTTTAAAACCTTGAGAGGAAGCCCGGGAGAAAGCCCAAAGAGGACAAGATCTACTAGTGGTGGGCTTGGATTGTCACATTCTTGTTTTTCGTCTTACAACGGGTTTTCTTTTTCTTTTGAATTGAAAGTACATTAGGAATTTTACATGAACAAATTGGTAAGCTGGTGTGATTGGATTAGGATTGGGCAGAGCTTTTGAAAAGTGAACTAGACTTCTTGAGTCTACTTTTTAAAGCCAATTTCCATTGAATGTTAAAGGTTTGGTTATTCATGTACACCTTTTAAGGCATATACATTTTTGCATTCTCAAAATTTCGGGAGGTTGTCAATCTCTGTAGCTTTCGTTCAACTTACGCCATTGGAAGTTACATGATGTACTTAATGCTCACCATTTTGTCAAAACTCTTGTGAGATCCCATATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGTGTAGAAACTTCTCCCTACACCCTAGCAGACGCGTTTTAAAGCCTTGAGGAAAAGCCCAAAGAGGACAATATATGTTAGCAGTGAGCTTGGTTAGTTATAAATGGTATCAGAGTCAGTCATTGGGAGGTGTGCCAACGAGAATGCTGGACTTCCAAGGGGGTAGATTGTAAGATCTCACGTCAGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGTATGGAAACCTCTCCCTAGCATACACGTTTTAAAACCTTGAGGGAAAGCCTAGAAGGAAAAGTCCAAAGAGGACAATATCTGCTAGCGGCGGGCTTGGGTAGTTACAAATGGTATTAGAGATAGTCATTGGATGGTGTGCTAGCGAGAATGTTGGACCTCCAAGGGGGATGGATTATGAGATCTCACGTCAGTTGGAGAGAGGAAGGAAATGTGGAAACCTCTCTCTAGCAGACGCGTTTTAAAACCAGGGAAAACCTAGAAGGAAGAATCCAAAGAAGACAATATTTGCTAGCGGTGGGTTTGAGCTGTTACAACTATGGACATCATTATTACTATATTTTGTTTCCTAAACCCTGTTGGAATGTTAGACTCTCTGATTTGCATGTCTCATTGACTTTGTACAGCCATAACCGGATCAGAAACAGGTTCTGAAGAAACAAAACCTTCCAGTTCGGCCAGCCAACTTATCCCAAATTTGCAGGAGGTAAACTTGGCGTTCTTTTATGAGTTAAAAGTTTAGTCAATAAGTAGACTGGAGCTTTTTGCTTGTTCTCTACTGGTTGGGAAGAGGAAATATAAGGGTGATGGCTGCGACAGAAAGTCGATTAGTGTGATGGAAAATCTTCGATATTAGACGGATCAGCATATGTGTAGCTTTATACGTTTATCGAGCATTGGATTCTCATGTATATTGTGGCTTGAAATTGGGAAAATAAACATTTTCAACAAGCTTTTACTTTCTTCCATGCTTTGTTGGATTTGTATGATGATGTTTTCGTACTGAAATCGCTCGTTTATTCGAAGTAACCTTGTCGTTTGGGAATCTTAACATACTTTTCATTCGAGTATGCAGGTGGAAACCCTGCTCACAAACATATGTGACACATCTTCGATTGCAGAGTTTGAATTGAAAGTATGTAGTGTTGCACTGTTTTTAACTATTTGAACTTCGATTGCTCTTTGTCTCAAATACTTTCCTTCTACTTCTGCAATCAGCTCAAAGGATTCAAGTTGCAGATAGTGAGGGATTTAAAAAGCGAAAATGTACCTCTTCCTCCAGTTCCAGAACCAGCTCCAGCTCCTGATATTCAAAGTACAAGTTCTATACAATCGGATTCAAACGGTATGGTTAAAACAACATCATTGGCTTTATTCAAACCAGAACCTGTTTCTTCTTCGTCTCCGGAGGGGATCTCCAGATTTGTAGAGAAAGCTAGAGATGAAGGCCTAGCAATACTTTCATCTCCTAAAGTAAGCATACAACGTTTTTTGTTTATTTTCTTCTTGCCTAAGTCATGGATGGTGAGTGAGGTGAGATTTGAATGCAGGTTGGGTTTTTTAGGCGGTGTCGAACCATAAAAGGCAAGCTTGCTCCGCCGTCGTGTAAAGAGGTATGTTGAATCCACACGCCGGTTAGTTCATAGGTTATATTGCGTTCTTTTTAGCTACTTCTGGTCTGCTGCATTTTGATCTTCCCATTTGCTTTTAGCATTAGACATGTTTATTGCCGTGATGAAATAAGATCCTACATCGGTTGGAGAGGGGAATGGAACGTTCCTTATAAGGGTGTGGAAATCTCTCTCTAGTAGACGCGTTTTAAAACTGTGTAGAAATATTTATGACTTGGGCTGTTACAAATGGTATCAGAGCTAGACACCGAGCGGTATGTTAGTAAGGGCGTTGGGCCCTCAAGGGGGGTGGATTGTAAGATTCCACATCGGTTGGAGAGTGGAACAAAGCATTCCTTATAAAGGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAAAACTTCAAGGAGAAACTCGAAAGAGAAAATTTAAAGGGGACAATATCTGCTAGCGGTTGGCTTGGACTGTTACACCAAACTTCACTAACATTGATTCACTAAACAGAACCAGGTTGTAAAAGAGGGTCAAGTGCTTTGTTTCATTGATCAGTTAAGTGCCGAGATCCCTATTGAGGTTCGAGTCTCGTCTTTAAACTTCATTAGTCAGTACTGAACTGATCGTATTCACATAAAGCTCTCACTGTTCTTGCACATTGTTTCTTCGTTTCATTTTGCAGTCGGACATATCTGGAGAAGTCGTGAAGATACTGCGCAAGGATGGCGGTAAGTCGGTTTTCGACGTTTTTCTTCTTCTACGCTTCAATACGCTGTAGTTTGATGAACAATGGCTTAGCAATTCACCATTTTCATGACAGAGCCTGTTGGATATGGTGATGCTCTTATTGCAATTCTGCCTTCATTTCCTGGGATAAAGAAGCTTCAGTAGATTGCTCCAAATCAAATCAATACTCTCTTAGATTCTATGCCTCTAGATTGCTTATACATTCCATTCCATCTCTCTCATCTCAATAAACAAATTTCTGCATTGAACTTTTAGGATTAGCCGTTGAACTTGTAGGAATTTCTATTACGTTCATAAAATTTTTTACTTTCAATTTTTTTTCTTTTACATGTAGTAAATGTTTGAGCTTTATCGTTCATCGGTTCTTAAAATTTTCATTTTGTATC ATGAGTGTTGGCCCATACTCTGAACTCCTCTGCCCATCGTTCTTGGAGCTTTTGTACTCTGTAATGGCGTCCTGCAGCTTGAGAACTGCAGACTTTAAAGTCTTCAGGGGAAGAGTCTCTACTTTGCCATCTTGTAGCTTAAGAAATTGGAGCAGGACACCGCAGCGATATTCGAGTTTGATAATATCATGTTCGTCTCGAAGAGATTTGCGTGCTTGTTGTAATGCATCGCCTGAGACCCGGACCATAACCGGATCAGAAACAGGTTCTGAAGAAACAAAACCTTCCAGTTCGGCCAGCCAACTTATCCCAAATTTGCAGGAGGTGGAAACCCTGCTCACAAACATATGTGACACATCTTCGATTGCAGAGTTTGAATTGAAACTCAAAGGATTCAAGTTGCAGATAGTGAGGGATTTAAAAAGCGAAAATGTACCTCTTCCTCCAGTTCCAGAACCAGCTCCAGCTCCTGATATTCAAAGTACAAGTTCTATACAATCGGATTCAAACGGTATGGTTAAAACAACATCATTGGCTTTATTCAAACCAGAACCTGTTTCTTCTTCGTCTCCGGAGGGGATCTCCAGATTTGTAGAGAAAGCTAGAGATGAAGGCCTAGCAATACTTTCATCTCCTAAAGTTGGGTTTTTTAGGCGGTGTCGAACCATAAAAGGCAAGCTTGCTCCGCCGTCGTGTAAAGAGTCGGACATATCTGGAGAAGTCGTGAAGATACTGCGCAAGGATGGCGAGCCTGTTGGATATGGTGATGCTCTTATTGCAATTCTGCCTTCATTTCCTGGGATAAAGAAGCTTCAGTAGATTGCTCCAAATCAAATCAATACTCTCTTAGATTCTATGCCTCTAGATTGCTTATACATTCCATTCCATCTCTCTCATCTCAATAAACAAATTTCTGCATTGAACTTTTAGGATTAGCCGTTGAACTTGTAGGAATTTCTATTACGTTCATAAAATTTTTTACTTTCAATTTTTTTTCTTTTACATGTAGTAAATGTTTGAGCTTTATCGTTCATCGGTTCTTAAAATTTTCATTTTGTATC ATGAGTGTTGGCCCATACTCTGAACTCCTCTGCCCATCGTTCTTGGAGCTTTTGTACTCTGTAATGGCGTCCTGCAGCTTGAGAACTGCAGACTTTAAAGTCTTCAGGGGAAGAGTCTCTACTTTGCCATCTTGTAGCTTAAGAAATTGGAGCAGGACACCGCAGCGATATTCGAGTTTGATAATATCATGTTCGTCTCGAAGAGATTTGCGTGCTTGTTGTAATGCATCGCCTGAGACCCGGACCATAACCGGATCAGAAACAGGTTCTGAAGAAACAAAACCTTCCAGTTCGGCCAGCCAACTTATCCCAAATTTGCAGGAGGTGGAAACCCTGCTCACAAACATATGTGACACATCTTCGATTGCAGAGTTTGAATTGAAACTCAAAGGATTCAAGTTGCAGATAGTGAGGGATTTAAAAAGCGAAAATGTACCTCTTCCTCCAGTTCCAGAACCAGCTCCAGCTCCTGATATTCAAAGTACAAGTTCTATACAATCGGATTCAAACGGTATGGTTAAAACAACATCATTGGCTTTATTCAAACCAGAACCTGTTTCTTCTTCGTCTCCGGAGGGGATCTCCAGATTTGTAGAGAAAGCTAGAGATGAAGGCCTAGCAATACTTTCATCTCCTAAAGTTGGGTTTTTTAGGCGGTGTCGAACCATAAAAGGCAAGCTTGCTCCGCCGTCGTGTAAAGAGTCGGACATATCTGGAGAAGTCGTGAAGATACTGCGCAAGGATGGCGAGCCTGTTGGATATGGTGATGCTCTTATTGCAATTCTGCCTTCATTTCCTGGGATAAAGAAGCTTCAGTAG MSVGPYSELLCPSFLELLYSVMASCSLRTADFKVFRGRVSTLPSCSLRNWSRTPQRYSSLIISCSSRRDLRACCNASPETRTITGSETGSEETKPSSSASQLIPNLQEVETLLTNICDTSSIAEFELKLKGFKLQIVRDLKSENVPLPPVPEPAPAPDIQSTSSIQSDSNGMVKTTSLALFKPEPVSSSSPEGISRFVEKARDEGLAILSSPKVGFFRRCRTIKGKLAPPSCKESDISGEVVKILRKDGEPVGYGDALIAILPSFPGIKKLQ Homology
BLAST of Cp4.1LG12g07860 vs. NCBI nr
Match: XP_023548691.1 (uncharacterized protein LOC111807271 [Cucurbita pepo subsp. pepo] >XP_023548692.1 uncharacterized protein LOC111807271 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 468 bits (1204), Expect = 6.11e-165 Identity = 251/279 (89.96%), Postives = 251/279 (89.96%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. NCBI nr
Match: KAG6575582.1 (hypothetical protein SDJN03_26221, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 466 bits (1198), Expect = 5.02e-164 Identity = 248/279 (88.89%), Postives = 251/279 (89.96%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. NCBI nr
Match: XP_022953286.1 (uncharacterized protein LOC111455878 [Cucurbita moschata] >XP_022953287.1 uncharacterized protein LOC111455878 [Cucurbita moschata]) HSP 1 Score: 465 bits (1197), Expect = 7.12e-164 Identity = 249/279 (89.25%), Postives = 251/279 (89.96%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. NCBI nr
Match: KAG7014123.1 (accB [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 464 bits (1193), Expect = 2.90e-163 Identity = 248/279 (88.89%), Postives = 250/279 (89.61%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. NCBI nr
Match: XP_022991822.1 (uncharacterized protein LOC111488354 [Cucurbita maxima] >XP_022991823.1 uncharacterized protein LOC111488354 [Cucurbita maxima]) HSP 1 Score: 445 bits (1144), Expect = 9.06e-156 Identity = 244/281 (86.83%), Postives = 245/281 (87.19%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. ExPASy TrEMBL
Match: A0A6J1GMK4 (uncharacterized protein LOC111455878 OS=Cucurbita moschata OX=3662 GN=LOC111455878 PE=4 SV=1) HSP 1 Score: 465 bits (1197), Expect = 3.45e-164 Identity = 249/279 (89.25%), Postives = 251/279 (89.96%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. ExPASy TrEMBL
Match: A0A6J1JMY6 (uncharacterized protein LOC111488354 OS=Cucurbita maxima OX=3661 GN=LOC111488354 PE=4 SV=1) HSP 1 Score: 445 bits (1144), Expect = 4.39e-156 Identity = 244/281 (86.83%), Postives = 245/281 (87.19%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. ExPASy TrEMBL
Match: A0A1S3CDF9 (biotin carboxyl carrier protein of acetyl-CoA carboxylase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499781 PE=4 SV=1) HSP 1 Score: 343 bits (879), Expect = 7.76e-116 Identity = 196/279 (70.25%), Postives = 215/279 (77.06%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. ExPASy TrEMBL
Match: A0A0A0KA77 (Lipoyl-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433220 PE=4 SV=1) HSP 1 Score: 340 bits (873), Expect = 6.56e-115 Identity = 191/280 (68.21%), Postives = 212/280 (75.71%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. ExPASy TrEMBL
Match: A0A6J1DWI3 (uncharacterized protein LOC111025146 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025146 PE=4 SV=1) HSP 1 Score: 325 bits (832), Expect = 5.61e-109 Identity = 188/257 (73.15%), Postives = 202/257 (78.60%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. TAIR 10
Match: AT3G15690.2 (Single hybrid motif superfamily protein ) HSP 1 Score: 176.4 bits (446), Expect = 3.1e-44 Identity = 125/281 (44.48%), Postives = 157/281 (55.87%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. TAIR 10
Match: AT1G52670.1 (Single hybrid motif superfamily protein ) HSP 1 Score: 166.8 bits (421), Expect = 2.5e-41 Identity = 115/281 (40.93%), Postives = 150/281 (53.38%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. TAIR 10
Match: AT3G15690.1 (Single hybrid motif superfamily protein ) HSP 1 Score: 133.3 bits (334), Expect = 3.0e-31 Identity = 104/258 (40.31%), Postives = 135/258 (52.33%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. TAIR 10
Match: AT3G56130.1 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 91.7 bits (226), Expect = 1.0e-18 Identity = 73/229 (31.88%), Postives = 108/229 (47.16%), Query Frame = 0
BLAST of Cp4.1LG12g07860 vs. TAIR 10
Match: AT3G56130.2 (biotin/lipoyl attachment domain-containing protein ) HSP 1 Score: 90.1 bits (222), Expect = 2.9e-18 Identity = 61/190 (32.11%), Postives = 96/190 (50.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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