Cp4.1LG12g07790 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g07790
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	late embryogenesis abundant protein 7
Location	Cp4.1LG12: 6799599 .. 6800400 (-)
RNA-Seq Expression	Cp4.1LG12g07790
Synteny	Cp4.1LG12g07790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTGGACTCGTGTCAATCCATTTGGTAGCTCCGGGAAGCTTATAAATAAGCTGGATTTGATTCATCCCATATTACTCACAAAAGAAACAGATCTAATTCTAAACAATGGCATCCCACAATCAGAGCTACAAGGCTGGTGAAACCAAGGGCCGAGCTGAGGTATTTTATTTATTTATTTATTTATTTATTTAAAAATGAATTATTCTCTAAATTAATTATTATTATTATTTTAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCGAGAAGCGAAGGAGAAGACGTACGAGACGGGGCAGGCGGCAAAGGACAAGGCCCATGGAGCAGCGGAGTCGACAAAAGAATGGGCCAAAGAGTCCAAAGATCAGACAGGAAGCTACATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGAAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGTGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGAAGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGGACTGGGAGTGACACCACCACTTATCGCAGGGGCTAATTCGTAATTCTGTTGTTGGTCTGCATGGTTTGTTGTTGTGTTGTGTTGTGTTGTGTAACATTTCCCTCCCTTTTTGTTGGAGGTGGTGTTTGGTGGTCTGTATTCCAATAAGAACATCCTTTGTCTTTGCTAGCTCCTATTATCCAATAATAATAAATGCAAGTAAAATGTAATTTAAAACTAAGAGAGAAAATTTATAATA

mRNA sequence

CCGTGGACTCGTGTCAATCCATTTGGTAGCTCCGGGAAGCTTATAAATAAGCTGGATTTGATTCATCCCATATTACTCACAAAAGAAACAGATCTAATTCTAAACAATGGCATCCCACAATCAGAGCTACAAGGCTGGTGAAACCAAGGGCCGAGCTGAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCGAGAAGCGAAGGAGAAGACGTACGAGACGGGGCAGGCGGCAAAGGACAAGGCCCATGGAGCAGCGGAGTCGACAAAAGAATGGGCCAAAGAGTCCAAAGATCAGACAGGAAGCTACATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGAAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGTGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGAAGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGGACTGGGAGTGACACCACCACTTATCGCAGGGGCTAATTCGTAATTCTGTTGTTGGTCTGCATGGTTTGTTGTTGTGTTGTGTTGTGTTGTGTAACATTTCCCTCCCTTTTTGTTGGAGGTGGTGTTTGGTGGTCTGTATTCCAATAAGAACATCCTTTGTCTTTGCTAGCTCCTATTATCCAATAATAATAAATGCAAGTAAAATGTAATTTAAAACTAAGAGAGAAAATTTATAATA

Coding sequence (CDS)

ATGGCATCCCACAATCAGAGCTACAAGGCTGGTGAAACCAAGGGCCGAGCTGAGGAGAAGACTAGTCAGGCGATGGGTACAATGGGGGACAAGGCCCGAGAAGCGAAGGAGAAGACGTACGAGACGGGGCAGGCGGCAAAGGACAAGGCCCATGGAGCAGCGGAGTCGACAAAAGAATGGGCCAAAGAGTCCAAAGATCAGACAGGAAGCTACATGTCGGATAAGGCCCAAGCGGCCCGAGAGAAGGCCCAATCTGGAAAGGAGACGACCGGAGGGATACTGGAGCAGACGGGTGAGAAAGTGAAGAGTATGGCCCAAGGAGCGGCGGAAGCTGTGAAAAGCACTTTTGGTATGGCCCACGATGATGACGTGGGCAAGGAGGGGACTGGGAGTGACACCACCACTTATCGCAGGGGCTAA

Protein sequence

MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTTYRRG

Homology

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.9e-26
Identity = 80/158 (50.63%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKT-----------YETGQAAKD 60
           MASH  QSYKAGET+G+A+EKT +AMGTMGDK + AK+KT           +ET Q+AKD
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  KAHGAAESTKEWAKESKDQTGSYMS-----------DKAQAAREKAQSGKETTGGILEQT 120
           K   AA++T+E A+ESKD+TGSYMS           D A+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 121 GEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTT 136
           GE+VK MA GA +AVK T G+  D+   +  + + +TT
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPSTT 158

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.2e-22
Identity = 67/144 (46.53%), Postives = 88/144 (61.11%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDK----------------------AREAKEK 60
           M SH+QSY+AGE KGR EEKT+Q +G + DK                      A+ AKEK
Sbjct: 1   MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 61  TYETGQAAKDKAHGAAESTKEWAKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTG 120
           T +T QAAKDK     ++TKE A+++  +     S+  Q+ +E AQSGK+ + G L+QTG
Sbjct: 61  TQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTG 120

Query: 121 EKVKSMAQGAAEAVKSTFGMAHDD 123
           EK K MAQGA +AVK TFGM +DD
Sbjct: 121 EKAKGMAQGATDAVKQTFGMTNDD 144

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.2e-22
Identity = 72/166 (43.37%), Postives = 91/166 (54.82%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEK---------------------- 60
           MASH+QSYKAGET GR EEKT+Q +G + DKA+ AKEK                      
Sbjct: 1   MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 61  ----------------------TYETGQAAKDKAHGAAESTKEWAKESKDQTGSYMSDKA 120
                                 T +T QAAKDK     E+TKE A+++  +     S+  
Sbjct: 61  TQQTAQAAKEKTQQTAQAAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMG 120

Query: 121 QAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAHDD 123
           Q+ +E AQSGK+ + G L+QTGEKVK MAQGA +AVK TFGMA+DD
Sbjct: 121 QSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDAVKQTFGMANDD 166

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy Swiss-Prot
Match: Q9LW12 (Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-21
Identity = 82/208 (39.42%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKARE----------------------AKEK 60
           MAS+ QSYKAGET+G+A+EKT QAMGTM DKA E                      AK+K
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 61  TYETGQAAKDKAHGAAESTKE-----------------------------WAKESKDQTG 120
           T +T QAA+ KAH  A+S KE                              A+E+KD+ G
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKAREAKDKAG 120

Query: 121 SYMSDKAQAAREKAQ----------------------SGKETTGGILEQTGEKVKSMAQG 136
           SY+S+  +A + KAQ                      +G++ TGG L QTGE VK MA G
Sbjct: 121 SYLSETGEAIKNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMG 180

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy Swiss-Prot
Match: P13939 (Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-21
Identity = 64/123 (52.03%), Postives = 81/123 (65.85%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASH QSYKAG  +GRA EK  Q   +M +KA  AK+KT ET +AAK K    AE+ K+ 
Sbjct: 1   MASHEQSYKAGRAEGRAHEKGEQMKESMKEKAEAAKQKTMETAEAAKQKTMETAEAAKQK 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
            + + + T       A AAR KA+  KET+GGIL+Q GEKV++ AQGA +AVK TFGMA 
Sbjct: 61  TRGAAETTNDKTKQTAGAARGKAEETKETSGGILQQAGEKVRNAAQGATDAVKHTFGMAD 120

Query: 121 DDD 124
            D+
Sbjct: 121 ADE 123

[Close]

BLAST of Cp4.1LG12g07790 vs. NCBI nr
Match: XP_023548700.1 (late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257 bits (656), Expect = 6.82e-86
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
           AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH
Sbjct: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120

Query: 121 DDDVGKEGTGSDTTTYRRG 139
           DDDVGKEGTGSDTTTYRRG
Sbjct: 121 DDDVGKEGTGSDTTTYRRG 139

[Close]

BLAST of Cp4.1LG12g07790 vs. NCBI nr
Match: KAG7014121.1 (Late embryogenesis abundant protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211 bits (538), Expect = 3.68e-68
Identity = 120/139 (86.33%), Postives = 120/139 (86.33%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKA                  HGAAESTKEW
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKA------------------HGAAESTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
           AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH
Sbjct: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120

Query: 121 DDDVGKEGTGSDTTTYRRG 139
           DDDVGKEGTGSDTTT RRG
Sbjct: 121 DDDVGKEGTGSDTTTNRRG 121

[Close]

BLAST of Cp4.1LG12g07790 vs. NCBI nr
Match: XP_022953941.1 (late embryogenesis abundant protein 7 [Cucurbita moschata])

HSP 1 Score: 205 bits (521), Expect = 1.35e-65
Identity = 118/139 (84.89%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKA                  HGAAESTKEW
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKA------------------HGAAESTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
           AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAH
Sbjct: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAH 119

Query: 121 DDDVGKEGTGSDTTTYRRG 139
           DDDVGKEG  SDTTTYRRG
Sbjct: 121 DDDVGKEG--SDTTTYRRG 119

[Close]

BLAST of Cp4.1LG12g07790 vs. NCBI nr
Match: XP_008461081.1 (PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo] >KAA0058774.1 late embryogenesis abundant protein D-7 [Cucumis melo var. makuwa] >TYK10568.1 late embryogenesis abundant protein D-7 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (475), Expect = 1.84e-58
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT+QAMGTMG+KAREAKEKTYETG+A KDKAHGAA+STKEW
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGAADSTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA 
Sbjct: 61  A-----------SDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

Query: 121 -HDDDVGKEGTGSDTTTYRR 138
            +DDDV K  T  D TTYRR
Sbjct: 121 QNDDDVDKGTT--DNTTYRR 127

[Close]

BLAST of Cp4.1LG12g07790 vs. NCBI nr
Match: XP_038899464.1 (LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 181 bits (459), Expect = 4.42e-56
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT++ MGTMGDKAREAKEKTYETG+AA++KAHGAA+STKEW
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNETMGTMGDKAREAKEKTYETGRAAREKAHGAADSTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQ AREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMA 
Sbjct: 61  A-----------SDTAQGAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAQ 120

Query: 121 HDDDVGKEGTGSDTTT 135
           HDD+V K+   SD TT
Sbjct: 121 HDDEVDKD---SDPTT 122

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy TrEMBL
Match: A0A6J1GPH8 (late embryogenesis abundant protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111456350 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 6.52e-66
Identity = 118/139 (84.89%), Postives = 119/139 (85.61%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSYKAGETKGRAEEKTSQAMGTMGDKA                  HGAAESTKEW
Sbjct: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKA------------------HGAAESTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
           AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAH
Sbjct: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAH 119

Query: 121 DDDVGKEGTGSDTTTYRRG 139
           DDDVGKEG  SDTTTYRRG
Sbjct: 121 DDDVGKEG--SDTTTYRRG 119

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy TrEMBL
Match: A0A5A7UUB6 (Late embryogenesis abundant protein D-7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002220 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.90e-59
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT+QAMGTMG+KAREAKEKTYETG+A KDKAHGAA+STKEW
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGAADSTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA 
Sbjct: 61  A-----------SDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

Query: 121 -HDDDVGKEGTGSDTTTYRR 138
            +DDDV K  T  D TTYRR
Sbjct: 121 QNDDDVDKGTT--DNTTYRR 127

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy TrEMBL
Match: A0A1S3CEC9 (late embryogenesis abundant protein D-7 OS=Cucumis melo OX=3656 GN=LOC103499778 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.90e-59
Identity = 111/140 (79.29%), Postives = 118/140 (84.29%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT+QAMGTMG+KAREAKEKTYETG+A KDKAHGAA+STKEW
Sbjct: 1   MASHNQSYRAGETKGRAEEKTNQAMGTMGEKAREAKEKTYETGRAVKDKAHGAADSTKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQA REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA 
Sbjct: 61  A-----------SDTAQAGREKAQTGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAS 120

Query: 121 -HDDDVGKEGTGSDTTTYRR 138
            +DDDV K  T  D TTYRR
Sbjct: 121 QNDDDVDKGTT--DNTTYRR 127

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy TrEMBL
Match: A0A0A0K6E1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433250 PE=4 SV=1)

HSP 1 Score: 180 bits (456), Expect = 3.02e-55
Identity = 106/139 (76.26%), Postives = 116/139 (83.45%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHNQSY+AGETKGRAEEKT+QAMG MG+KAREAKEKTYETG+AA++KAHGAA+STKEW
Sbjct: 49  MASHNQSYRAGETKGRAEEKTNQAMGAMGEKAREAKEKTYETGRAAREKAHGAADSTKEW 108

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA- 120
           A           SD AQ  REKAQ+GKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMA 
Sbjct: 109 A-----------SDAAQTGREKAQAGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAQ 168

Query: 121 HDDDVGKEGTGSDTTTYRR 138
           HD+DV K    S+ TT RR
Sbjct: 169 HDEDVDKS---SNATTNRR 173

[Close]

BLAST of Cp4.1LG12g07790 vs. ExPASy TrEMBL
Match: A0A6J1JR52 (late embryogenesis abundant protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488151 PE=4 SV=1)

HSP 1 Score: 171 bits (432), Expect = 1.89e-52
Identity = 102/139 (73.38%), Postives = 106/139 (76.26%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEW 60
           MASHN+ YK GE+KGRAEEKTSQAMG MGDKA                  HGAAES KEW
Sbjct: 1   MASHNERYKGGESKGRAEEKTSQAMGRMGDKA------------------HGAAESKKEW 60

Query: 61  AKESKDQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGMAH 120
           A+E KDQTGSYMSDKAQ       SGKETTGGILEQTGEKVKSMAQGAA+AVKSTFGMAH
Sbjct: 61  AEEPKDQTGSYMSDKAQ-------SGKETTGGILEQTGEKVKSMAQGAADAVKSTFGMAH 112

Query: 121 DDDVGKEGTGSDTTTYRRG 139
           DDDVGKEGT  D TTYRRG
Sbjct: 121 DDDVGKEGT--DPTTYRRG 112

[Close]

BLAST of Cp4.1LG12g07790 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 80/158 (50.63%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKT-----------YETGQAAKD 60
           MASH  QSYKAGET+G+A+EKT +AMGTMGDK + AK+KT           +ET Q+AKD
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  KAHGAAESTKEWAKESKDQTGSYMS-----------DKAQAAREKAQSGKETTGGILEQT 120
           K   AA++T+E A+ESKD+TGSYMS           D A+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 121 GEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTT 136
           GE+VK MA GA +AVK T G+  D+   +  + + +TT
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPSTT 158

[Close]

BLAST of Cp4.1LG12g07790 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 120.2 bits (300), Expect = 1.3e-27
Identity = 80/158 (50.63%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 1   MASH-NQSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKT-----------YETGQAAKD 60
           MASH  QSYKAGET+G+A+EKT +AMGTMGDK + AK+KT           +ET Q+AKD
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  KAHGAAESTKEWAKESKDQTGSYMS-----------DKAQAAREKAQSGKETTGGILEQT 120
           K   AA++T+E A+ESKD+TGSYMS           D A+  +E A++GKE T GIL QT
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQT 120

Query: 121 GEKVKSMAQGAAEAVKSTFGMAHDDDVGKEGTGSDTTT 136
           GE+VK MA GA +AVK T G+  D+   +  + + +TT
Sbjct: 121 GEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPSTT 158

[Close]

BLAST of Cp4.1LG12g07790 vs. TAIR 10
Match: AT3G15670.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 104.4 bits (259), Expect = 7.7e-23
Identity = 82/208 (39.42%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 1   MASHNQSYKAGETKGRAEEKTSQAMGTMGDKARE----------------------AKEK 60
           MAS+ QSYKAGET+G+A+EKT QAMGTM DKA E                      AK+K
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 61  TYETGQAAKDKAHGAAESTKE-----------------------------WAKESKDQTG 120
           T +T QAA+ KAH  A+S KE                              A+E+KD+ G
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKEKTSQAGDKAREAKDKAG 120

Query: 121 SYMSDKAQAAREKAQ----------------------SGKETTGGILEQTGEKVKSMAQG 136
           SY+S+  +A + KAQ                      +G++ TGG L QTGE VK MA G
Sbjct: 121 SYLSETGEAIKNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQTGEHVKQMAMG 180

[Close]

BLAST of Cp4.1LG12g07790 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08
Identity = 41/113 (36.28%), Postives = 66/113 (58.41%), Query Frame = 0


Query: 6   QSYKAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEWAKESK 65
           Q + AG+ +G+A+EK  Q   +    A+ A +KT +  Q+A+DKA    +S       ++
Sbjct: 4   QQFNAGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQS-------AR 63

Query: 66  DQTGSYMSDKAQAAREKAQSGKETTGGILEQTGEKVKSMAQGAAEAVKSTFGM 119
           D+T    +D + +A + AQ  +E   G+  QTGE VK+MAQGA + VK++ GM
Sbjct: 64  DKT----ADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGM 105

[Close]

BLAST of Cp4.1LG12g07790 vs. TAIR 10
Match: AT5G44310.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = 0


Query: 9   KAGETKGRAEEKTSQAMGTMGDKAREAKEKTYETGQAAKDKAHGAAESTKEWAKESKDQT 68
           KA + K R ++   Q    + + A  A +K YET + AKDKA+   E TK++A+E+KD+ 
Sbjct: 60  KAYDMKERTKDYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKV 119

Query: 69  ---GSYMSDKA----QAAREKAQSGKETTGGILEQTGEKVKSMAQGAAE 111
               S  +DKA    + A++KA   KE T    E+T EKV   A  AA+
Sbjct: 120 NEGASRAADKAYETKEKAKDKAYDVKEKTKDFAEETKEKVNEGASRAAD 168

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96270	1.9e-26	50.63	Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE...	[more]
O49817	2.2e-22	46.53	Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
O49816	8.2e-22	43.37	Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1	[more]
Q9LW12	1.1e-21	39.42	Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 ...	[more]
P13939	3.1e-21	52.03	Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum OX=3635 PE=2 SV=1	[more]

BLAST of Cp4.1LG12g07790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548700.1	6.82e-86	100.00	late embryogenesis abundant protein 7 [Cucurbita pepo subsp. pepo]	[more]
KAG7014121.1	3.68e-68	86.33	Late embryogenesis abundant protein 7 [Cucurbita argyrosperma subsp. argyrosperm...	[more]
XP_022953941.1	1.35e-65	84.89	late embryogenesis abundant protein 7 [Cucurbita moschata]	[more]
XP_008461081.1	1.84e-58	79.29	PREDICTED: late embryogenesis abundant protein D-7 [Cucumis melo] >KAA0058774.1 ...	[more]
XP_038899464.1	4.42e-56	77.94	LOW QUALITY PROTEIN: late embryogenesis abundant protein 2-like [Benincasa hispi...	[more]

BLAST of Cp4.1LG12g07790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPH8	6.52e-66	84.89	late embryogenesis abundant protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111456...	[more]
A0A5A7UUB6	8.90e-59	79.29	Late embryogenesis abundant protein D-7 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3CEC9	8.90e-59	79.29	late embryogenesis abundant protein D-7 OS=Cucumis melo OX=3656 GN=LOC103499778 ...	[more]
A0A0A0K6E1	3.02e-55	76.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433250 PE=4 SV=1	[more]
A0A6J1JR52	1.89e-52	73.38	late embryogenesis abundant protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Cp4.1LG12g07790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52690.1	1.3e-27	50.63	Late embryogenesis abundant protein (LEA) family protein	[more]
AT1G52690.2	1.3e-27	50.63	Late embryogenesis abundant protein (LEA) family protein	[more]
AT3G15670.1	7.7e-23	39.42	Late embryogenesis abundant protein (LEA) family protein	[more]
AT4G13560.1	2.4e-08	36.28	Late embryogenesis abundant protein (LEA) family protein	[more]
AT5G44310.1	3.8e-06	37.61	Late embryogenesis abundant protein (LEA) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	6.10.140.1430		coord: 5..56 e-value: 1.8E-5 score: 26.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..139
None	No IPR available	PANTHER	PTHR47372:SF1	LATE EMBRYOGENESIS ABUNDANT PROTEIN 29-RELATED	coord: 1..129
None	No IPR available	PANTHER	PTHR47372	DAUER UP-REGULATED-RELATED	coord: 1..129

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07790.1	Cp4.1LG12g07790.1	mRNA