Cp4.1LG12g07710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g07710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Phototropic-responsive NPH3 family protein
Location	Cp4.1LG12: 6772480 .. 6775767 (-)
RNA-Seq Expression	Cp4.1LG12g07710
Synteny	Cp4.1LG12g07710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACGCTCTAGAGTGTATTTTGTTTGAGAGAAAGATGGTTAGGAGGAGGAGATTCTACATCGGTTGGAGAGGGGAAATAAACATGGTTTATAAGTGGGTGGATACCTCTCTCTATCAGACACGTTTTTAAAACCTTGGGGGATGCTTAAAGAGAAAACTGACCATATCTGCTATCGGTGGGCTTGAGCTCTTACATCTAGGTTTGGCTGGTATGGGTCCCGGTCGTTTTCGGTGCATACAAATTGAAGGGGATGGATGATATGAAGTATAAGGTATAAATTTGAAGGGGATGGATGATATCAAATATGATCTGCCAATTGGATGAACTCACCATATTCTCTGCATTTATAATCTTTGTCTTCTCCTTCCTCTCTTATCACCTGCTCTGTTTTCCCCAATTCCAGTTCCAATTCTGATTCCGATTCCACTTCATTATGAACAACCACCAATCTCCGCCGCAAGATTCCGCCGTAATCCCCCCCCAATTTGGGGATTCCGATCACTGTTTCTGGTTCGACGATTCCACCATCCTCGACATCGATTACTTCGTCAAAACCCTAGCCGGAATCAACGCCAAAGGCGTTCGATCCGATTTAGTCGCCTCTCTCATAACGCATTACGCTTCCAAATGGCTTCCGGATCTCTCCGACGAGCCTCTCGATTCACACAATTCCTGGTTGAATTTCACTAATTCCACCGATTTTCAGGAATCGCCGGAAACTATCACCAATTCCTGGATGAAGAAGAGATTCTTCGTTGAGACGTTGGTTGGAGTATTGCCGCCGGAGCGGGATTTGATTCCGTGTAATTTTTTGCTGAGGCTTCTCCGGACGGCGAATATGGTGGGAGTAGAGCCGCCGTACAGGGTGGAGCTGGAGAAGAGGATTACTTGGCAGTTAGATCAGGCGTCGTTGAAGGAGGTCATGATTCCGTCGTTTAATCATACGTGTGGAACGGTTTTGGATGTGGAATTGGTTATTCGACTTGTGAAGAGGTTTGTGAGCTTGGATGACGGCGTTAGGAGCGGCGCCGCCTTGGTTAAGGTGGCGAAGTTGGTGGACTGTTACCTTGCGGAGGCGGCAATGGATTCCAATTTGGGGTTGCCGGAGTTCGTTGAGCTCGCCGGTGCTCTACCAAGCCATTCTCGAGCCTCCGACGATGGGCTCTACCGAGCCATTGATACCTATCTCAAAGTAAGGCTTCTTTCTCTTTTTGTACGCTCTTTTAATTAACTACATAATAAAATATTCAAAATTATTTTTATAAATAATATTGCATTTTTTAAAACTAATAATAATACCCATTTATTTAAACACATGGCTAACAAATCAAAATTTTAAAAAATAAAGTAAAATTTCTAAACTTTTAATTTTTTCTATTCAATTATTTTCAAAAAATGAACTGATTTATTAAATATAAATATAAATAAATTTTATATTTAATAAAAAACTTTCATAGCTTAAAATAATAAAAATTAGATTTGTAATTTAAAAAGGTAGAGATGATATTTTGATACTGAAACTAAAATAATAATAATAATAATAAAAGGTTTATTCTAGAAGGGGTAAAAAAGGGAAAGAAATAAGGAGGAGAGAAAAACATAATACTTTAATTCTTAAAAAGTTATTTAAAAATATCCTCCAAATTTTAAAATTTTAAATTTTTTCAAAAAAATATTATTACGGTCAATATATGTTTAAAAAATACTCATAAACTATTAAAAGTAATATTAAATTTTTTGGAAATAATCTATGAAGTGCTAATAGACTACTTTCATCCATATAATAACGTTAAGATTTTTTTTAAGTAAACGACATTAATATTTTATGAGTATTTTTTAAATAAAATATTAAAAATAAATGGTATTTTAATTTTTTTTTTAATTTGAAGTATTAATGTTTTAAAGTTTAAGATTATATTTTAAGATATTTGAAATAAAATATTAACACTAAAACTAAACATAAAAATATTTTTAAGACCCTTTTTTATAGTTTAATATTATTATTAAATTTTTTTAAAATTTAGAAGCATGTCTAAATACTTTAATAGGTATTTTTATTAATATATATATTTAAAAAATGGTTTTGTTTCAAGCCATTTTTTTAATGATAATTACTATTTTAATTAAAAAAATATAAAATATTATAAATAGAGTGGGTCGAATATAATTCTTAAAAACCCAAGTTTAAATATTATAAGATAATCTTTAATATCTCAATTTTATTTATTTATTTTATTAAATAAGTAAGTAAATCAATAAATAAAAATAAATAAAATGAGTGAGATGGGTCATAGATTAGTATGAGATTGGGATAGGAACGGTGACTAGAAATATAATCCATATCTCTTGAAAGTTAAATAACTAGAAATATAATCCATATCTCTTGAAAGTTAAATAGATATCTCTAAACTTTAGCGATTCCATATACTTTTATTAATACGAGATTTTTTAACCGTTAAATGATGAATACGTGAATGATGATAAATATTTTAAGAAAGAAATGAGAATTATTTTAAAGTTGAGATGGAGGAAGGAAATGATTATATATGCATTATGTGCATCTCAGGCACATCCGAATGTATCAAAGCAAGAAAGGAAGAGTGTATGCAGAGTAATGGACAGCAGGAAGCTATCAACAGAGGCATCACTCCACGCAGCTCAAAACGAGCGCCTCCCAGTCCGAGCTCTAATCCAAGTCCTCTTCTCCGACCACACCAAACTCAACTACCGCCACCCCGACTGGAGCGGCTATATCGGCGGAGCACGGAGCCCCTCCACCCCCCTCGACCACCTCCCCACCAGGTGCCAATCCAAGAGAGAAACAACAGCCCAACAGATGGAGATTAAGAGGCTCAAAGACACGGTGCTGAGGCTGCAGAACCAGTGCAATCTAATGCAGGCTCAAATGGAGAGGCTGTCCGAGAAGAAGAGGGGGTTTTTCAAGTGGAGGAGGTTTGGGTTTAAGAACGCCGAGGAGACGGACAAACTTGATGCCCGCGGCGGAGATGTGGTGGAGGATGCGGCGGCGGCGGCGGCGGGGTTTGGGGGACACACGCCGGTGGACATTAAAGCCAAGTTGGTCAAACGTAGGACGCCCAACAAGACATGGAGGAAATCTATGTCTTGAAAATGCGTTTTCTTTTATCTAATGTAATCTAACCTAACACTCTCTTCCAATTTTTATGCATTATTATTATTATTATTATTATTATTATTATTATTATTTACTATAATACTAATATTTTCACTTTCTTTATTTCACACGTGTCCACGAGTTGAGTTACCATA

mRNA sequence

GACGCTCTAGAGTGTATTTTGTTTGAGAGAAAGATGGTTAGGAGGAGGAGATTCTACATCGGTTGGAGAGGGGAAATAAACATGGTTTATAAGTGGGTGGATACCTCTCTCTATCAGACACGTTTTTAAAACCTTGGGGGATGCTTAAAGAGAAAACTGACCATATCTGCTATCGGTGGGCTTGAGCTCTTACATCTAGGTTTGGCTGGTATGGGTCCCGGTCGTTTTCGGTGCATACAAATTGAAGGGGATGGATGATATGAAGTATAAGGTATAAATTTGAAGGGGATGGATGATATCAAATATGATCTGCCAATTGGATGAACTCACCATATTCTCTGCATTTATAATCTTTGTCTTCTCCTTCCTCTCTTATCACCTGCTCTGTTTTCCCCAATTCCAGTTCCAATTCTGATTCCGATTCCACTTCATTATGAACAACCACCAATCTCCGCCGCAAGATTCCGCCGTAATCCCCCCCCAATTTGGGGATTCCGATCACTGTTTCTGGTTCGACGATTCCACCATCCTCGACATCGATTACTTCGTCAAAACCCTAGCCGGAATCAACGCCAAAGGCGTTCGATCCGATTTAGTCGCCTCTCTCATAACGCATTACGCTTCCAAATGGCTTCCGGATCTCTCCGACGAGCCTCTCGATTCACACAATTCCTGGTTGAATTTCACTAATTCCACCGATTTTCAGGAATCGCCGGAAACTATCACCAATTCCTGGATGAAGAAGAGATTCTTCGTTGAGACGTTGGTTGGAGTATTGCCGCCGGAGCGGGATTTGATTCCGTGTAATTTTTTGCTGAGGCTTCTCCGGACGGCGAATATGGTGGGAGTAGAGCCGCCGTACAGGGTGGAGCTGGAGAAGAGGATTACTTGGCAGTTAGATCAGGCGTCGTTGAAGGAGGTCATGATTCCGTCGTTTAATCATACGTGTGGAACGGTTTTGGATGTGGAATTGGTTATTCGACTTGTGAAGAGGTTTGTGAGCTTGGATGACGGCGTTAGGAGCGGCGCCGCCTTGGTTAAGGTGGCGAAGTTGGTGGACTGTTACCTTGCGGAGGCGGCAATGGATTCCAATTTGGGGTTGCCGGAGTTCGTTGAGCTCGCCGGTGCTCTACCAAGCCATTCTCGAGCCTCCGACGATGGGCTCTACCGAGCCATTGATACCTATCTCAAAGCACATCCGAATGTATCAAAGCAAGAAAGGAAGAGTGTATGCAGAGTAATGGACAGCAGGAAGCTATCAACAGAGGCATCACTCCACGCAGCTCAAAACGAGCGCCTCCCAGTCCGAGCTCTAATCCAAGTCCTCTTCTCCGACCACACCAAACTCAACTACCGCCACCCCGACTGGAGCGGCTATATCGGCGGAGCACGGAGCCCCTCCACCCCCCTCGACCACCTCCCCACCAGGTGCCAATCCAAGAGAGAAACAACAGCCCAACAGATGGAGATTAAGAGGCTCAAAGACACGGTGCTGAGGCTGCAGAACCAGTGCAATCTAATGCAGGCTCAAATGGAGAGGCTGTCCGAGAAGAAGAGGGGGTTTTTCAAGTGGAGGAGGTTTGGGTTTAAGAACGCCGAGGAGACGGACAAACTTGATGCCCGCGGCGGAGATGTGGTGGAGGATGCGGCGGCGGCGGCGGCGGGGTTTGGGGGACACACGCCGGTGGACATTAAAGCCAAGTTGGTCAAACGTAGGACGCCCAACAAGACATGGAGGAAATCTATGTCTTGAAAATGCGTTTTCTTTTATCTAATGTAATCTAACCTAACACTCTCTTCCAATTTTTATGCATTATTATTATTATTATTATTATTATTATTATTATTATTTACTATAATACTAATATTTTCACTTTCTTTATTTCACACGTGTCCACGAGTTGAGTTACCATA

Coding sequence (CDS)

ATGAACAACCACCAATCTCCGCCGCAAGATTCCGCCGTAATCCCCCCCCAATTTGGGGATTCCGATCACTGTTTCTGGTTCGACGATTCCACCATCCTCGACATCGATTACTTCGTCAAAACCCTAGCCGGAATCAACGCCAAAGGCGTTCGATCCGATTTAGTCGCCTCTCTCATAACGCATTACGCTTCCAAATGGCTTCCGGATCTCTCCGACGAGCCTCTCGATTCACACAATTCCTGGTTGAATTTCACTAATTCCACCGATTTTCAGGAATCGCCGGAAACTATCACCAATTCCTGGATGAAGAAGAGATTCTTCGTTGAGACGTTGGTTGGAGTATTGCCGCCGGAGCGGGATTTGATTCCGTGTAATTTTTTGCTGAGGCTTCTCCGGACGGCGAATATGGTGGGAGTAGAGCCGCCGTACAGGGTGGAGCTGGAGAAGAGGATTACTTGGCAGTTAGATCAGGCGTCGTTGAAGGAGGTCATGATTCCGTCGTTTAATCATACGTGTGGAACGGTTTTGGATGTGGAATTGGTTATTCGACTTGTGAAGAGGTTTGTGAGCTTGGATGACGGCGTTAGGAGCGGCGCCGCCTTGGTTAAGGTGGCGAAGTTGGTGGACTGTTACCTTGCGGAGGCGGCAATGGATTCCAATTTGGGGTTGCCGGAGTTCGTTGAGCTCGCCGGTGCTCTACCAAGCCATTCTCGAGCCTCCGACGATGGGCTCTACCGAGCCATTGATACCTATCTCAAAGCACATCCGAATGTATCAAAGCAAGAAAGGAAGAGTGTATGCAGAGTAATGGACAGCAGGAAGCTATCAACAGAGGCATCACTCCACGCAGCTCAAAACGAGCGCCTCCCAGTCCGAGCTCTAATCCAAGTCCTCTTCTCCGACCACACCAAACTCAACTACCGCCACCCCGACTGGAGCGGCTATATCGGCGGAGCACGGAGCCCCTCCACCCCCCTCGACCACCTCCCCACCAGGTGCCAATCCAAGAGAGAAACAACAGCCCAACAGATGGAGATTAAGAGGCTCAAAGACACGGTGCTGAGGCTGCAGAACCAGTGCAATCTAATGCAGGCTCAAATGGAGAGGCTGTCCGAGAAGAAGAGGGGGTTTTTCAAGTGGAGGAGGTTTGGGTTTAAGAACGCCGAGGAGACGGACAAACTTGATGCCCGCGGCGGAGATGTGGTGGAGGATGCGGCGGCGGCGGCGGCGGGGTTTGGGGGACACACGCCGGTGGACATTAAAGCCAAGTTGGTCAAACGTAGGACGCCCAACAAGACATGGAGGAAATCTATGTCTTGA

Protein sequence

MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDIKAKLVKRRTPNKTWRKSMS

Homology

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BLAST of Cp4.1LG12g07710 vs. ExPASy Swiss-Prot
Match: Q9FMF5 (Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2)

HSP 1 Score: 241.1 bits (614), Expect = 2.3e-62
Identity = 158/457 (34.57%), Postives = 236/457 (51.64%), Query Frame = 0


Query: 10  DSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPD 69
           +S  +PP        +WF+D +IL ID+FV+ +  I  KG+R +L+ ++I HYA KWLP 
Sbjct: 243 NSQPVPPD-------WWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPG 302

Query: 70  LSDE--------------------------PLDSHNS-------W-------LNFTNSTD 129
           L  E                             S++S       W       L+   +  
Sbjct: 303 LIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHMVLSAGKTNG 362

Query: 130 FQESPETITN---SWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYRVE 189
            Q+S   +     S   +R  VE+L+ ++PP++D + C+FLLRLLR ANM+ V P    E
Sbjct: 363 HQDSVACLAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITE 422

Query: 190 LEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVSLDD------------- 249
           LEKR+  Q +QA+L++++IP +N+   T+ DV+LV RL++ F+  +              
Sbjct: 423 LEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSP 482

Query: 250 -------------------GVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALP 309
                              G  +  A ++VA+LVD YL E A D NL L +F  LA ALP
Sbjct: 483 SQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALP 542

Query: 310 SHSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRAL 369
             +R  DDGLYRAID+YLKAHP +S+ ERK +CRVMD +KLS +A +HAAQNERLP+R +
Sbjct: 543 ESARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVV 602

Query: 370 IQVLFSDHTKLNYRHPDWS-------GYIGGARSPSTP-----LDHLPTRCQ-----SKR 375
           +QVLFS+  K++    + S       G   G   P  P     ++  P   Q     +K+
Sbjct: 603 VQVLFSEQVKISNALANTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAAAKK 662

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy Swiss-Prot
Match: Q5KS50 (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CPT1 PE=2 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 8.3e-60
Identity = 151/441 (34.24%), Postives = 230/441 (52.15%), Query Frame = 0


Query: 5   QSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYAS 64
           +S P   AV P         +WF+D ++L ID+FV+ +  I  KG+R DL+ + ITHYAS
Sbjct: 256 ESSPSRQAVPPAD-------WWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYAS 315

Query: 65  KWLPDLS-DEPLDSHNS--WLNFTNS----------------TDFQESPETITNSWMKKR 124
           KWLP L+ D PL + +   W   + +                    +     +    ++R
Sbjct: 316 KWLPGLTKDAPLGATHDEPWAQASAAGVGGGGLHMMIISGAGGGKDDVLAACSAPSREQR 375

Query: 125 FFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMI 184
             VE+++ + PP+RD + C FLLRLLR A M+   P    ELEKR+  QL+QA+L +++I
Sbjct: 376 MVVESIISITPPQRDSVSCGFLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLI 435

Query: 185 PSF-NHTCGTVLDVELVIRLVKRFVSLDDGVRSGA------------------------- 244
           PS+      T  DV+LV RLV+ F+  +    + A                         
Sbjct: 436 PSYGGRAADTAYDVDLVQRLVEHFLVQEQTEMAVASSPGRGDPPPPPQPEYYSGRMPPSS 495

Query: 245 --------------ALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLY 304
                         A  +VA+L+D YL+E + D NL L +F  LA +LP  +RA DDGLY
Sbjct: 496 AAAASASASTGGLNAKARVARLLDSYLSEVSRDRNLSLTKFQVLAESLPESARACDDGLY 555

Query: 305 RAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKL 364
           RA+D+YLKAHP +++ ERK +CRVMD +KLS +A +HAAQNERLP+R ++QVLF++  K+
Sbjct: 556 RAVDSYLKAHPTLTEHERKRLCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLFTEQVKI 615

Query: 365 NYRHPDWSGYI-------GGARSPSTP------LDHLPTRCQ-----SKRETTAQQMEIK 369
           +      S  +       G   +P+ P      LD  P   Q     +K++    + E++
Sbjct: 616 SNALASSSAALRSSSSAPGADAAPAMPTTRRQLLDGTPQSFQEGWAAAKKDINTLKFELE 675

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy Swiss-Prot
Match: Q9S9Q9 (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2)

HSP 1 Score: 203.0 bits (515), Expect = 7.0e-51
Identity = 131/397 (33.00%), Postives = 212/397 (53.40%), Query Frame = 0


Query: 16  PQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPL 75
           P+   SD  +W++D+++L    F + +  + ++G+R D++A  +T+Y  K LP L     
Sbjct: 208 PKHTSSD--WWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLKRRRG 267

Query: 76  DSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTAN 135
              +S    T         E       +++  +E +  +L  ++ L+P  F + +LR A 
Sbjct: 268 GPESSGRFSTPLGSGNVLSEE------EQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAK 327

Query: 136 MVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFV------ 195
           ++   P     LEKRI  QLDQA+L+++++PSF+HT  T+ DV+ V R++  F+      
Sbjct: 328 ILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIM 387

Query: 196 ---------SLDDGVRSGA-----ALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPS 255
                    S+DDG   G+      +  VAKL+D YLAE A D NL LP+F  LA ++P 
Sbjct: 388 PGGVGSPCSSVDDGNLIGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPE 447

Query: 256 HSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALI 315
           ++R  DDGLYRAID YLK HP +++ ER+++CR++D +KLS EA  HAAQNERLP+R ++
Sbjct: 448 YARLLDDGLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIV 507

Query: 316 QVLF----------------SDHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRET 375
           QVLF                SD+     R     GY+GG            T   + RE 
Sbjct: 508 QVLFFEQLQLRTSVAGCFLVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWAT---AVREN 567

Query: 376 TAQQMEIKRLKDTVLRLQNQCNLMQAQMERLSEKKRG 377
              ++ +  ++  V  L+ +C+ M+ ++E+L +  +G
Sbjct: 568 QVLKVGMDSMRMRVCELEKECSNMRQEIEKLGKTTKG 593

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy Swiss-Prot
Match: Q9LYW0 (BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-50
Identity = 132/389 (33.93%), Postives = 213/389 (54.76%), Query Frame = 0


Query: 25  FWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPLDSHNSWLNF 84
           +WFDD++ L +  F + +  I A+G++ + +A  + +Y  K +P +        N  +N 
Sbjct: 218 WWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVPLM--------NRQVNM 277

Query: 85  TNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYR 144
                 ++  ET   S   ++  +E +VG+LP ++ + P  FLLRLL+TA ++      R
Sbjct: 278 D-----EQVIETPNPSEEDQKTCLEEIVGLLPSKKGVNPTKFLLRLLQTAMVLHASQSSR 337

Query: 145 VELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVS-------------L 204
             LE+RI  QLDQA+L +++IP+  ++  T+ DVE V+R++++FVS             +
Sbjct: 338 ENLERRIGNQLDQAALVDLLIPNMGYS-ETLYDVECVLRMIEQFVSSTEQAGIVPSPCII 397

Query: 205 DDG--VRSGAALVK----VAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLY 264
           ++G  V+ GA L+     VA LVD YLAE A D NL L +F  +A A+P ++R  DDG+Y
Sbjct: 398 EEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYARPLDDGVY 457

Query: 265 RAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKL 324
            AID YLKAHP ++  ER+ +CR+M+ +KLS EAS HAAQNERLP+R ++QVLF +  +L
Sbjct: 458 HAIDVYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLRL 517

Query: 325 NYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLMQA 384
                 W        +P           Q        +   + +++ V  L+ +C  M+ 
Sbjct: 518 RTSVSGWFFVSENLDNPDN---------QHGANGGLLKPRGENVRERVSELEKECMNMKQ 577

Query: 385 QMERLSEKKRGFFKW-RRFGFKNAEETDK 394
           ++ +L   KR +  + R+  FK   E  K
Sbjct: 578 ELHKLVRTKRSWKNFTRKLNFKKKSECCK 583

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy Swiss-Prot
Match: Q9FNB3 (Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana OX=3702 GN=At5g13600 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.6e-47
Identity = 125/392 (31.89%), Postives = 208/392 (53.06%), Query Frame = 0


Query: 25  FWFDD-STILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPLDSHNSWLN 84
           +WF+D S+ LD+  + + +  + ++GV + ++A+ +THYA + LP L         S   
Sbjct: 209 WWFNDVSSFLDLPMYKRFIKTVESRGVNAGIIAASVTHYAKRNLPLLGCSRKSGSPSEEG 268

Query: 85  FTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPY 144
                D   S E       ++R  +E +V +LP ++ +    FLLRLLRT+ ++      
Sbjct: 269 TNYGDDMYYSHE-------EQRSLLEEIVELLPGKKCVTSTKFLLRLLRTSMVLHASQVT 328

Query: 145 RVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRF-VSLDDGV------- 204
           +  LEKRI  QLD+A+L++++IP+  ++  T+ D + V R++  F ++ D  +       
Sbjct: 329 QETLEKRIGMQLDEAALEDLLIPNMKYSGETLYDTDSVQRILDHFMLTFDSSIVEEKQMM 388

Query: 205 ---RSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLYRAIDTYL 264
                  ++ KVA L+D YLAE A D NL L +F  L   +P   R  DDG+YRAID Y+
Sbjct: 389 GDSHPLKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDDGIYRAIDIYI 448

Query: 265 KAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKLNYRHPDW 324
           KAHP +++ ER+ +C +M+ +KLS EA  HAAQNERLP+R ++QVLF +  +L      W
Sbjct: 449 KAHPWLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQMRLRTSIAGW 508

Query: 325 SGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLMQAQMERLSE 384
               G   +  T      +      + T   M +  +++ V  L+ +C  M+  +++L +
Sbjct: 509 --LFGSEENNDT------SGALEGNKNTNANMVMHGMRERVFELEKECMSMKQDLDKLVK 568

Query: 385 KKRG--FFKWRRFGFKNAEETDKLDARGGDVV 403
            K G  FF  + FG ++  +T      G D +
Sbjct: 569 TKEGRNFFS-KIFGSRSKTKTSPCGKGGEDAL 584

[Close]

BLAST of Cp4.1LG12g07710 vs. NCBI nr
Match: XP_023547761.1 (root phototropism protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 881 bits (2276), Expect = 0.0
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT
Sbjct: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS
Sbjct: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC
Sbjct: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI
Sbjct: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVKRRTPNKTWRKSMS
Sbjct: 421 KAKLVKRRTPNKTWRKSMS 439

[Close]

BLAST of Cp4.1LG12g07710 vs. NCBI nr
Match: XP_022953230.1 (root phototropism protein 3-like [Cucurbita moschata] >XP_022953231.1 root phototropism protein 3-like [Cucurbita moschata])

HSP 1 Score: 855 bits (2210), Expect = 8.65e-313
Identity = 428/439 (97.49%), Postives = 430/439 (97.95%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSPPQ SAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT
Sbjct: 1   MNNHQSPPQHSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSH+RAS
Sbjct: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHARAS 240

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           DHTKLNYRHPDWSGYIGG RSPS  LDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC
Sbjct: 301 DHTKLNYRHPDWSGYIGGGRSPSAALDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEE DK DARGGDVVE+A   AAGFGGHTPVDI
Sbjct: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEEADKHDARGGDVVEEA---AAGFGGHTPVDI 420

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVKRRTPNKTWRKSMS
Sbjct: 421 KAKLVKRRTPNKTWRKSMS 436

[Close]

BLAST of Cp4.1LG12g07710 vs. NCBI nr
Match: KAG6575574.1 (Coleoptile phototropism protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 849 bits (2194), Expect = 2.47e-310
Identity = 426/439 (97.04%), Postives = 429/439 (97.72%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSP + SAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT
Sbjct: 1   MNNHQSPTKHSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNL LPEFVELAGALPSH+RAS
Sbjct: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLRLPEFVELAGALPSHARAS 240

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           DHTKLNYRHPDWSGYIGG RSPS  LDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC
Sbjct: 301 DHTKLNYRHPDWSGYIGGGRSPSAALDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEE DKLDARGGDVVE+AA  AAGFGGHTPVDI
Sbjct: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEEADKLDARGGDVVEEAA--AAGFGGHTPVDI 420

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVK RTPNKTWRKSMS
Sbjct: 421 KAKLVKPRTPNKTWRKSMS 437

[Close]

BLAST of Cp4.1LG12g07710 vs. NCBI nr
Match: KAG7014115.1 (Coleoptile phototropism protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 848 bits (2191), Expect = 6.81e-310
Identity = 425/439 (96.81%), Postives = 428/439 (97.49%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSP Q SAVIPP+FGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT
Sbjct: 1   MNNHQSPTQHSAVIPPEFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNL LPEFVELAGALPSH+RAS
Sbjct: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLRLPEFVELAGALPSHARAS 240

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           DHTKLNYRHPDWSGYIGG RSPS  LDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC
Sbjct: 301 DHTKLNYRHPDWSGYIGGGRSPSAALDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEE DKLDARGGDVVE+A   AAGFGGHTPVDI
Sbjct: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEEADKLDARGGDVVEEA---AAGFGGHTPVDI 420

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVK RTPNKTWRKSMS
Sbjct: 421 KAKLVKPRTPNKTWRKSMS 436

[Close]

BLAST of Cp4.1LG12g07710 vs. NCBI nr
Match: XP_022992007.1 (root phototropism protein 3-like [Cucurbita maxima])

HSP 1 Score: 843 bits (2178), Expect = 2.45e-307
Identity = 422/439 (96.13%), Postives = 428/439 (97.49%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSPPQ SAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGV+SDLVASLIT
Sbjct: 36  MNNHQSPPQHSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVQSDLVASLIT 95

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNST F+ESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 96  HYASKWLPDLSDEPLDSHNSWLNFTNSTHFKESPETITNSWMKKRFFVETLVGVLPPERD 155

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 156 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 215

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSH+RAS
Sbjct: 216 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHARAS 275

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 276 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 335

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           +HTKLNYRH DWSGYIGGARSPS  LDHLPTRCQSKRETTAQQMEIKRLKDTV+RLQNQC
Sbjct: 336 NHTKLNYRHLDWSGYIGGARSPSAALDHLPTRCQSKRETTAQQMEIKRLKDTVVRLQNQC 395

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEE DKLDARGGDVVE+    AAGFGGH PVDI
Sbjct: 396 NLMQAQMERLSEKKRGFFKWRRFGFKNAEEADKLDARGGDVVEEE---AAGFGGHAPVDI 455

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVKRRTPNKTWRKSMS
Sbjct: 456 KAKLVKRRTPNKTWRKSMS 471

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy TrEMBL
Match: A0A6J1GMF0 (root phototropism protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111455841 PE=3 SV=1)

HSP 1 Score: 855 bits (2210), Expect = 4.19e-313
Identity = 428/439 (97.49%), Postives = 430/439 (97.95%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSPPQ SAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT
Sbjct: 1   MNNHQSPPQHSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSH+RAS
Sbjct: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHARAS 240

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           DHTKLNYRHPDWSGYIGG RSPS  LDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC
Sbjct: 301 DHTKLNYRHPDWSGYIGGGRSPSAALDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEE DK DARGGDVVE+A   AAGFGGHTPVDI
Sbjct: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEEADKHDARGGDVVEEA---AAGFGGHTPVDI 420

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVKRRTPNKTWRKSMS
Sbjct: 421 KAKLVKRRTPNKTWRKSMS 436

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy TrEMBL
Match: A0A6J1JNI0 (root phototropism protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111488485 PE=3 SV=1)

HSP 1 Score: 843 bits (2178), Expect = 1.19e-307
Identity = 422/439 (96.13%), Postives = 428/439 (97.49%), Query Frame = 0


Query: 1   MNNHQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLIT 60
           MNNHQSPPQ SAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGV+SDLVASLIT
Sbjct: 36  MNNHQSPPQHSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVQSDLVASLIT 95

Query: 61  HYASKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERD 120
           HYASKWLPDLSDEPLDSHNSWLNFTNST F+ESPETITNSWMKKRFFVETLVGVLPPERD
Sbjct: 96  HYASKWLPDLSDEPLDSHNSWLNFTNSTHFKESPETITNSWMKKRFFVETLVGVLPPERD 155

Query: 121 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 180
           LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL
Sbjct: 156 LIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVEL 215

Query: 181 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRAS 240
           VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSH+RAS
Sbjct: 216 VIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHARAS 275

Query: 241 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 300
           DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS
Sbjct: 276 DDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFS 335

Query: 301 DHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQC 360
           +HTKLNYRH DWSGYIGGARSPS  LDHLPTRCQSKRETTAQQMEIKRLKDTV+RLQNQC
Sbjct: 336 NHTKLNYRHLDWSGYIGGARSPSAALDHLPTRCQSKRETTAQQMEIKRLKDTVVRLQNQC 395

Query: 361 NLMQAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDI 420
           NLMQAQMERLSEKKRGFFKWRRFGFKNAEE DKLDARGGDVVE+    AAGFGGH PVDI
Sbjct: 396 NLMQAQMERLSEKKRGFFKWRRFGFKNAEEADKLDARGGDVVEEE---AAGFGGHAPVDI 455

Query: 421 KAKLVKRRTPNKTWRKSMS 439
           KAKLVKRRTPNKTWRKSMS
Sbjct: 456 KAKLVKRRTPNKTWRKSMS 471

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy TrEMBL
Match: A0A1S3CDV4 (root phototropism protein 3 OS=Cucumis melo OX=3656 GN=LOC103499766 PE=3 SV=1)

HSP 1 Score: 699 bits (1803), Expect = 8.52e-251
Identity = 367/454 (80.84%), Postives = 394/454 (86.78%), Query Frame = 0


Query: 2   NNHQSPPQDSAVIPP--QFGD--SDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVAS 61
           NNHQSPPQ+S  I P  QFGD  SD  +WFDDSTILDIDYFVKTLAGI AKGVRSDL+ S
Sbjct: 3   NNHQSPPQNSGKISPGPQFGDNNSDQSYWFDDSTILDIDYFVKTLAGIKAKGVRSDLIGS 62

Query: 62  LITHYASKWLPDLSDEPLDSH------NSWLNFTNSTDFQESPETITNSWMKKRFFVETL 121
           +ITHYASKWLPDLSDE L++H      N  +N  N+  FQESPE++TNSWMKKRFFVETL
Sbjct: 63  IITHYASKWLPDLSDEALNNHQGNNNNNGGVNLMNNNSFQESPESVTNSWMKKRFFVETL 122

Query: 122 VGVLPPERDLIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHT 181
           VGVLPPERDLIPCNFLLRLLRTANMVGVE PY+ ELEKRITWQLDQASLKEVMIPSF+HT
Sbjct: 123 VGVLPPERDLIPCNFLLRLLRTANMVGVEAPYKAELEKRITWQLDQASLKEVMIPSFSHT 182

Query: 182 CGTVLDVELVIRLVKRFVSLDDG--VRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVEL 241
           CGTVLDVELVIRLVKRFVSL+DG  VRSGAALVKVAK+VDCYLAEAAMDSNLGL EFVEL
Sbjct: 183 CGTVLDVELVIRLVKRFVSLEDGGGVRSGAALVKVAKMVDCYLAEAAMDSNLGLTEFVEL 242

Query: 242 AGALPSHSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERL 301
           AGALP+H+R SDDGLYRAIDTYLKAHPNVSKQERKS+C++MDSRKLSTEASLHAAQNERL
Sbjct: 243 AGALPNHARGSDDGLYRAIDTYLKAHPNVSKQERKSICKLMDSRKLSTEASLHAAQNERL 302

Query: 302 PVRALIQVLFSDHTKLNYRHPDWSGYIGGA--RSPSTPLDHLPTRCQSKRETTAQQMEIK 361
           PVRA+IQVLFS+ TKLNYRH DWSG IGG   RSPS  LDHLPTRCQSKRE TAQQMEIK
Sbjct: 303 PVRAVIQVLFSEQTKLNYRHLDWSGSIGGGGGRSPSAALDHLPTRCQSKREITAQQMEIK 362

Query: 362 RLKDTVLRLQNQCNLMQAQMERLSEKKRG-FFKWRRFGFKN-AEETDKLDARGGDVVEDA 421
           RLKDTV+RLQNQCNLMQAQMERLSEKKRG FFKWR+FGFKN   + +KLD  GG+     
Sbjct: 363 RLKDTVVRLQNQCNLMQAQMERLSEKKRGSFFKWRKFGFKNYVGDMEKLDDGGGEG-GGG 422

Query: 422 AAAAAGFGGHTPVDIKAKLVKRRTPNKTWRKSMS 439
                GFG  TPVDIK KLVKRRTP KTWRKS+S
Sbjct: 423 EMGEEGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 455

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy TrEMBL
Match: A0A5D3CGU2 (Root phototropism protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002340 PE=3 SV=1)

HSP 1 Score: 696 bits (1795), Expect = 1.41e-249
Identity = 366/454 (80.62%), Postives = 393/454 (86.56%), Query Frame = 0


Query: 2   NNHQSPPQDSAVIPP--QFGD--SDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVAS 61
           NNHQS PQ+S  I P  QFGD  SD  +WFDDSTILDIDYFVKTLAGI AKGVRSDL+ S
Sbjct: 3   NNHQSSPQNSGKISPGPQFGDNNSDQSYWFDDSTILDIDYFVKTLAGIKAKGVRSDLIGS 62

Query: 62  LITHYASKWLPDLSDEPLDSH------NSWLNFTNSTDFQESPETITNSWMKKRFFVETL 121
           +ITHYASKWLPDLSDE L++H      N  +N  N+  FQESPE++TNSWMKKRFFVETL
Sbjct: 63  IITHYASKWLPDLSDEALNNHQGNNNNNGGVNLMNNNSFQESPESVTNSWMKKRFFVETL 122

Query: 122 VGVLPPERDLIPCNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHT 181
           VGVLPPERDLIPCNFLLRLLRTANMVGVE PY+ ELEKRITWQLDQASLKEVMIPSF+HT
Sbjct: 123 VGVLPPERDLIPCNFLLRLLRTANMVGVEAPYKAELEKRITWQLDQASLKEVMIPSFSHT 182

Query: 182 CGTVLDVELVIRLVKRFVSLDDG--VRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVEL 241
           CGTVLDVELVIRLVKRFVSL+DG  VRSGAALVKVAK+VDCYLAEAAMDSNLGL EFVEL
Sbjct: 183 CGTVLDVELVIRLVKRFVSLEDGGGVRSGAALVKVAKMVDCYLAEAAMDSNLGLTEFVEL 242

Query: 242 AGALPSHSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERL 301
           AGALP+H+R SDDGLYRAIDTYLKAHPNVSKQERKS+C++MDSRKLSTEASLHAAQNERL
Sbjct: 243 AGALPNHARGSDDGLYRAIDTYLKAHPNVSKQERKSICKLMDSRKLSTEASLHAAQNERL 302

Query: 302 PVRALIQVLFSDHTKLNYRHPDWSGYIGGA--RSPSTPLDHLPTRCQSKRETTAQQMEIK 361
           PVRA+IQVLFS+ TKLNYRH DWSG IGG   RSPS  LDHLPTRCQSKRE TAQQMEIK
Sbjct: 303 PVRAVIQVLFSEQTKLNYRHLDWSGSIGGGGGRSPSAALDHLPTRCQSKREITAQQMEIK 362

Query: 362 RLKDTVLRLQNQCNLMQAQMERLSEKKRG-FFKWRRFGFKN-AEETDKLDARGGDVVEDA 421
           RLKDTV+RLQNQCNLMQAQMERLSEKKRG FFKWR+FGFKN   + +KLD  GG+     
Sbjct: 363 RLKDTVVRLQNQCNLMQAQMERLSEKKRGSFFKWRKFGFKNYVGDMEKLDDGGGEG-GGG 422

Query: 422 AAAAAGFGGHTPVDIKAKLVKRRTPNKTWRKSMS 439
                GFG  TPVDIK KLVKRRTP KTWRKS+S
Sbjct: 423 EMGEEGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 455

[Close]

BLAST of Cp4.1LG12g07710 vs. ExPASy TrEMBL
Match: A0A6J1KT96 (coleoptile phototropism protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498026 PE=3 SV=1)

HSP 1 Score: 695 bits (1793), Expect = 3.81e-249
Identity = 355/436 (81.42%), Postives = 385/436 (88.30%), Query Frame = 0


Query: 4   HQSPPQDSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYA 63
           HQSPPQDS  + P     D C+WF DS ILDIDYFVKTLAGI AKGVR+DL+ S+ITHYA
Sbjct: 42  HQSPPQDSGKLSP-----DQCYWFHDSAILDIDYFVKTLAGIKAKGVRTDLIGSVITHYA 101

Query: 64  SKWLPDLSDEPLDSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIP 123
           SKWLPDLSDE LD     ++ TN   F ESP+ +TNSWMKK+FFVETLVGVLPPERDLIP
Sbjct: 102 SKWLPDLSDEALDQQKG-IDLTN---FNESPQNVTNSWMKKKFFVETLVGVLPPERDLIP 161

Query: 124 CNFLLRLLRTANMVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIR 183
           CNFLLRLLRTANMVGVEPPY+ ELEKRITWQLDQASLKEVMIPSF+HTCGTVLDVELVIR
Sbjct: 162 CNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIR 221

Query: 184 LVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDG 243
           LVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGL EFVELAG LPSH+RASDDG
Sbjct: 222 LVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDG 281

Query: 244 LYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHT 303
           LYRAIDTYLK HPN+SKQERKS+CR+MDSRKLSTEASLHAAQN+RLPVRA+IQVLFS+ T
Sbjct: 282 LYRAIDTYLKTHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQT 341

Query: 304 KLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLM 363
           KLNYRH DWSG IGG RSPS  LDHLP RCQSKRE TAQQMEIK+LK+TVLRLQNQCN+M
Sbjct: 342 KLNYRHLDWSGSIGG-RSPSAALDHLPARCQSKREITAQQMEIKKLKETVLRLQNQCNIM 401

Query: 364 QAQMERLSEKKRGFFKWRRFGFKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPVDIKAK 423
           Q QMERLSEKKRGFFKWR+FGFKN  E++++D  GG+VVE+     AGFG  TPVDIK K
Sbjct: 402 QVQMERLSEKKRGFFKWRKFGFKNGGESERVDD-GGEVVEEE---DAGFGRQTPVDIKTK 461

Query: 424 LVKRRTPNKTWRKSMS 439
           LVKRRTP KTWRKS+S
Sbjct: 462 LVKRRTPTKTWRKSVS 463

[Close]

BLAST of Cp4.1LG12g07710 vs. TAIR 10
Match: AT1G52770.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 452.6 bits (1163), Expect = 3.6e-127
Identity = 244/440 (55.45%), Postives = 311/440 (70.68%), Query Frame = 0


Query: 24  CFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPLDSHNSWLN 83
           C WFDD  IL IDYFVKT+AGI +KGVR DL+ S+I HYAS+WLPDLSD  L        
Sbjct: 26  CSWFDDGCILGIDYFVKTIAGIKSKGVRPDLIGSIIVHYASQWLPDLSDIVL-------- 85

Query: 84  FTNSTDFQESPE------TITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMV 143
             NS D Q  P+      ++T   MKKR FVETL+G++PPERD +PC+FLLRLLRTANMV
Sbjct: 86  --NSDDQQPQPQQQSESFSVTAFVMKKRSFVETLIGIIPPERDSVPCDFLLRLLRTANMV 145

Query: 144 GVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVSLD-DGVR 203
           G +  Y+ ELE RI+WQLDQASLKE+MIPSF+HTCGT+LDVEL+ RLVK+F  LD +GV+
Sbjct: 146 GADANYKAELEARISWQLDQASLKELMIPSFSHTCGTLLDVELMTRLVKKFAGLDNEGVK 205

Query: 204 SGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLYRAIDTYLKAHP 263
           SGA+L+KVAKLVD YLAEAA+D +L L EF+ L  ALP+H+R ++DGLYRAIDTYLKAHP
Sbjct: 206 SGASLIKVAKLVDSYLAEAALDGDLTLSEFISLVEALPNHARVTEDGLYRAIDTYLKAHP 265

Query: 264 NVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKLNYR---HPDWS 323
           NV+KQERK +C ++DS KLS EASLHAAQN+RLPVR +IQVLFS+  KL++R   + +WS
Sbjct: 266 NVTKQERKRLCGLIDSNKLSMEASLHAAQNDRLPVRTIIQVLFSEQAKLSHRSHNNIEWS 325

Query: 324 G-YIGGARSPSTP-----LDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLMQAQM 383
           G    G RS   P      D  P RC SKRE   QQ EI+RL++ + +L+ +C  MQ Q+
Sbjct: 326 GSSFSGVRSSPNPSGSHYSDSGPARCTSKREINVQQAEIRRLREDMAKLKCECEAMQTQL 385

Query: 384 ERLSEKK-------RGFFKWRRFGFKNAEETDKLD-ARGGDVVEDAAAAAAGFGGHTPVD 440
            +L EKK       +GFF+W++ GF++      ++   G +   +       +   TP +
Sbjct: 386 HKLVEKKGTCTSGNKGFFRWKKLGFRSGLSVSVVENTNGEEFGNNGEGENFEYVTQTPGN 445

[Close]

BLAST of Cp4.1LG12g07710 vs. TAIR 10
Match: AT3G15570.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 448.0 bits (1151), Expect = 8.9e-126
Identity = 248/441 (56.24%), Postives = 309/441 (70.07%), Query Frame = 0


Query: 19  GDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSD--EPLD 78
           GD ++  +FD+S I D++YFVKT+ GI +KG+R DL+ S+I HYASKWLPDLS     + 
Sbjct: 22  GDMEYYTYFDESCIQDMNYFVKTITGIKSKGIRPDLIGSIIAHYASKWLPDLSGNVSAII 81

Query: 79  SHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANM 138
           S  S  +  N  D Q  PE++T S MKKRFFVETL+G+LPPE+D +PCNFLLRLLRTA M
Sbjct: 82  SSTSLESKNNHNDTQ--PESVTASVMKKRFFVETLIGILPPEKDSVPCNFLLRLLRTAKM 141

Query: 139 VGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVSLD-DGV 198
           VG  P Y  ELE R++WQLDQASLKE+MIPSF++T GT+LD+ELV RLV +F  LD +GV
Sbjct: 142 VGANPNYLTELETRVSWQLDQASLKELMIPSFSYTSGTLLDIELVTRLVNKFSGLDSEGV 201

Query: 199 RSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLYRAIDTYLKAH 258
           ++ AALVKVAKLVD YLAEAA+D  L LPEF+ L  ALPSH+R ++DGLYRAIDTYLKAH
Sbjct: 202 KTAAALVKVAKLVDSYLAEAAVDGGLALPEFISLITALPSHARTTEDGLYRAIDTYLKAH 261

Query: 259 PNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKLNYRHPDW--S 318
           P V KQERK +CR++DSRKLS EA+LHAAQN+RLPVRA+I VLF++ TKL+ RH D   S
Sbjct: 262 PQVLKQERKELCRLIDSRKLSPEAALHAAQNDRLPVRAIIGVLFTEQTKLS-RHIDCNSS 321

Query: 319 GYIGGARSPSTPLDH------LPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLMQAQM 378
                 RSP+              RC SKRE   QQ EI+RL++ V+RLQ+QC  M  Q+
Sbjct: 322 SISSTTRSPTNASGSHYLEGGSAARCLSKREMNVQQAEIRRLREDVVRLQSQCGAMHFQL 381

Query: 379 ERLSEKK-----RGFFKWRRFG----FKNAEETDKLDARGGDVVEDAAAAAAGFGGHTPV 438
           ERL EKK     +GFF+W+R G     + +   +K +   GD  E       GF   TP 
Sbjct: 382 ERLMEKKSSGGSKGFFRWKRLGLVPSIRGSVSVEKGEEESGDNGE-------GFEPRTPG 441

Query: 439 DIKAKLVKRRTPNKTWRKSMS 440
           ++K +LVK RT    WRKSMS
Sbjct: 442 NMKTRLVKGRTTPSRWRKSMS 452

[Close]

BLAST of Cp4.1LG12g07710 vs. TAIR 10
Match: AT5G64330.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 241.1 bits (614), Expect = 1.7e-63
Identity = 158/457 (34.57%), Postives = 236/457 (51.64%), Query Frame = 0


Query: 10  DSAVIPPQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPD 69
           +S  +PP        +WF+D +IL ID+FV+ +  I  KG+R +L+ ++I HYA KWLP 
Sbjct: 243 NSQPVPPD-------WWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPG 302

Query: 70  LSDE--------------------------PLDSHNS-------W-------LNFTNSTD 129
           L  E                             S++S       W       L+   +  
Sbjct: 303 LIKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHMVLSAGKTNG 362

Query: 130 FQESPETITN---SWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYRVE 189
            Q+S   +     S   +R  VE+L+ ++PP++D + C+FLLRLLR ANM+ V P    E
Sbjct: 363 HQDSVACLAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITE 422

Query: 190 LEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVSLDD------------- 249
           LEKR+  Q +QA+L++++IP +N+   T+ DV+LV RL++ F+  +              
Sbjct: 423 LEKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSP 482

Query: 250 -------------------GVRSGAALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALP 309
                              G  +  A ++VA+LVD YL E A D NL L +F  LA ALP
Sbjct: 483 SQSMYADIPRGNNNNGGGGGGNNQNAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALP 542

Query: 310 SHSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRAL 369
             +R  DDGLYRAID+YLKAHP +S+ ERK +CRVMD +KLS +A +HAAQNERLP+R +
Sbjct: 543 ESARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVV 602

Query: 370 IQVLFSDHTKLNYRHPDWS-------GYIGGARSPSTP-----LDHLPTRCQ-----SKR 375
           +QVLFS+  K++    + S       G   G   P  P     ++  P   Q     +K+
Sbjct: 603 VQVLFSEQVKISNALANTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAAAKK 662

[Close]

BLAST of Cp4.1LG12g07710 vs. TAIR 10
Match: AT1G30440.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 203.0 bits (515), Expect = 5.0e-52
Identity = 131/397 (33.00%), Postives = 212/397 (53.40%), Query Frame = 0


Query: 16  PQFGDSDHCFWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPL 75
           P+   SD  +W++D+++L    F + +  + ++G+R D++A  +T+Y  K LP L     
Sbjct: 208 PKHTSSD--WWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLKRRRG 267

Query: 76  DSHNSWLNFTNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTAN 135
              +S    T         E       +++  +E +  +L  ++ L+P  F + +LR A 
Sbjct: 268 GPESSGRFSTPLGSGNVLSEE------EQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAK 327

Query: 136 MVGVEPPYRVELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFV------ 195
           ++   P     LEKRI  QLDQA+L+++++PSF+HT  T+ DV+ V R++  F+      
Sbjct: 328 ILKASPDCIANLEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIM 387

Query: 196 ---------SLDDGVRSGA-----ALVKVAKLVDCYLAEAAMDSNLGLPEFVELAGALPS 255
                    S+DDG   G+      +  VAKL+D YLAE A D NL LP+F  LA ++P 
Sbjct: 388 PGGVGSPCSSVDDGNLIGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPE 447

Query: 256 HSRASDDGLYRAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALI 315
           ++R  DDGLYRAID YLK HP +++ ER+++CR++D +KLS EA  HAAQNERLP+R ++
Sbjct: 448 YARLLDDGLYRAIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIV 507

Query: 316 QVLF----------------SDHTKLNYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRET 375
           QVLF                SD+     R     GY+GG            T   + RE 
Sbjct: 508 QVLFFEQLQLRTSVAGCFLVSDNLDGGSRQLRSGGYVGGPNEGGGGGGGWAT---AVREN 567

Query: 376 TAQQMEIKRLKDTVLRLQNQCNLMQAQMERLSEKKRG 377
              ++ +  ++  V  L+ +C+ M+ ++E+L +  +G
Sbjct: 568 QVLKVGMDSMRMRVCELEKECSNMRQEIEKLGKTTKG 593

[Close]

BLAST of Cp4.1LG12g07710 vs. TAIR 10
Match: AT5G03250.1 (Phototropic-responsive NPH3 family protein )

HSP 1 Score: 202.2 bits (513), Expect = 8.5e-52
Identity = 132/389 (33.93%), Postives = 213/389 (54.76%), Query Frame = 0


Query: 25  FWFDDSTILDIDYFVKTLAGINAKGVRSDLVASLITHYASKWLPDLSDEPLDSHNSWLNF 84
           +WFDD++ L +  F + +  I A+G++ + +A  + +Y  K +P +        N  +N 
Sbjct: 218 WWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVPLM--------NRQVNM 277

Query: 85  TNSTDFQESPETITNSWMKKRFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYR 144
                 ++  ET   S   ++  +E +VG+LP ++ + P  FLLRLL+TA ++      R
Sbjct: 278 D-----EQVIETPNPSEEDQKTCLEEIVGLLPSKKGVNPTKFLLRLLQTAMVLHASQSSR 337

Query: 145 VELEKRITWQLDQASLKEVMIPSFNHTCGTVLDVELVIRLVKRFVS-------------L 204
             LE+RI  QLDQA+L +++IP+  ++  T+ DVE V+R++++FVS             +
Sbjct: 338 ENLERRIGNQLDQAALVDLLIPNMGYS-ETLYDVECVLRMIEQFVSSTEQAGIVPSPCII 397

Query: 205 DDG--VRSGAALVK----VAKLVDCYLAEAAMDSNLGLPEFVELAGALPSHSRASDDGLY 264
           ++G  V+ GA L+     VA LVD YLAE A D NL L +F  +A A+P ++R  DDG+Y
Sbjct: 398 EEGHLVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYARPLDDGVY 457

Query: 265 RAIDTYLKAHPNVSKQERKSVCRVMDSRKLSTEASLHAAQNERLPVRALIQVLFSDHTKL 324
            AID YLKAHP ++  ER+ +CR+M+ +KLS EAS HAAQNERLP+R ++QVLF +  +L
Sbjct: 458 HAIDVYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLRL 517

Query: 325 NYRHPDWSGYIGGARSPSTPLDHLPTRCQSKRETTAQQMEIKRLKDTVLRLQNQCNLMQA 384
                 W        +P           Q        +   + +++ V  L+ +C  M+ 
Sbjct: 518 RTSVSGWFFVSENLDNPDN---------QHGANGGLLKPRGENVRERVSELEKECMNMKQ 577

Query: 385 QMERLSEKKRGFFKW-RRFGFKNAEETDK 394
           ++ +L   KR +  + R+  FK   E  K
Sbjct: 578 ELHKLVRTKRSWKNFTRKLNFKKKSECCK 583

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMF5	2.3e-62	34.57	Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2	[more]
Q5KS50	8.3e-60	34.24	Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CP...	[more]
Q9S9Q9	7.0e-51	33.00	BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9LYW0	1.2e-50	33.93	BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9FNB3	1.6e-47	31.89	Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Cp4.1LG12g07710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547761.1	0.0	100.00	root phototropism protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022953230.1	8.65e-313	97.49	root phototropism protein 3-like [Cucurbita moschata] >XP_022953231.1 root photo...	[more]
KAG6575574.1	2.47e-310	97.04	Coleoptile phototropism protein 1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014115.1	6.81e-310	96.81	Coleoptile phototropism protein 1, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022992007.1	2.45e-307	96.13	root phototropism protein 3-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG12g07710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMF0	4.19e-313	97.49	root phototropism protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111455841 P...	[more]
A0A6J1JNI0	1.19e-307	96.13	root phototropism protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111488485 PE=...	[more]
A0A1S3CDV4	8.52e-251	80.84	root phototropism protein 3 OS=Cucumis melo OX=3656 GN=LOC103499766 PE=3 SV=1	[more]
A0A5D3CGU2	1.41e-249	80.62	Root phototropism protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1KT96	3.81e-249	81.42	coleoptile phototropism protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114980...	[more]

BLAST of Cp4.1LG12g07710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52770.1	3.6e-127	55.45	Phototropic-responsive NPH3 family protein	[more]
AT3G15570.1	8.9e-126	56.24	Phototropic-responsive NPH3 family protein	[more]
AT5G64330.1	1.7e-63	34.57	Phototropic-responsive NPH3 family protein	[more]
AT1G30440.1	5.0e-52	33.00	Phototropic-responsive NPH3 family protein	[more]
AT5G03250.1	8.5e-52	33.93	Phototropic-responsive NPH3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 346..373
None	No IPR available	PANTHER	PTHR32370:SF130	PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN	coord: 16..438
IPR027356	NPH3 domain	PFAM	PF03000	NPH3	coord: 25..280 e-value: 1.0E-80 score: 271.1
IPR027356	NPH3 domain	PROSITE	PS51649	NPH3	coord: 24..304 score: 81.910622
IPR043454	NPH3/RPT2-like family	PANTHER	PTHR32370	OS12G0117600 PROTEIN	coord: 16..438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07710.1	Cp4.1LG12g07710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane