Cp4.1LG12g07210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g07210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Unknown protein
Location	Cp4.1LG12: 7087687 .. 7090682 (-)
RNA-Seq Expression	Cp4.1LG12g07210
Synteny	Cp4.1LG12g07210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTTCATAAAAAAGCCCATCGGGCCTATAAACAACTTACAGATAGGTCGGTGGGCGCAGCCATGGCCACAGATCGAGTAGCTTATCTTCTTCTCCGCCACTCAAAGCCGCTCTCTGAAAACCCACGCTGGCTCTCTCTGCTTATACAAACCACACAACAATGTCACTTCAAGCTCACCTGGTTCATTTCCTACTCAGCCATGGCCGCCGCAATTTCCTTCACAATCTCTAGCTCTTCCCTCTGGTCTCGACTTTCTAAACCCGCTTCTAAATTTCGCGATCACCGTCTGAGAATCATGGCCGCGGCTACCGGAACTAAGGTGGTACCCGCTGTGATAGTCGGAAGTGGGCGCGTTGGGAGGGCGCTGCTGGACATGGGAAACGGCGAAGATTTTTTGGTGAAGAGAGGCGAGTCCGTGCCCCTTGATTTTCCAGGTCCTATCCTTGTTTGTACCAGAAATGATGATCTTGAAGCTGTTCTTGAATCCACTCCTCGATCGAGGTGGAACGGTATGATCATCGAATCGTGCTATTGTCTTTATTTTCTCTCTTATTTGAATCGAGACGCATTTTATTGGCGACGATATGCTTCACTCCCATCTCGTTTTATGGGGTTTGAATTCGAAGTTTATGAGCTTTCTTGTTTTCATTGCCTTTCCCATAAACTCAGCTTCAGCTCAAGTTTTTTGGTACAAGTTTACCAAATTTCATTTCATTTCCTTTCCAATTGGTATTGTAGTTCACGTCTGGACTTCGTGACTCAATTTAATATCCAAGCTTGCATACCATATGCAATCAACTCACATTTCCTGTGAGATTCCATATTTCATTTCGGGTGGAAACCTCCCCTAGCAAACACTTTAAAATCTTGAGAAAAAATCCGAAAGGAAAAGTCCAAAGAGAATGATATCTGCTAGCGGTGGGCCTGTTACAAAGGGTTTCAAAGTTAGACACGAGCACACCAACGAAGATGTTTCCCGAGGGGTGGATTGTGAGATCCCACATTGGTTAGAGAGGAACGAAAGATTCTTTACAAGGGTGTGGAAATCTCTCCCTAGCACTCTTCTAGCGTTTTAAAGCCTTGAAGGAAAGTCTGAAGTGAAAGCTCAAAGAGGACAATATACTTGGGTTGTATGCAACGTTCGAATTTAAGAAGAAATTAGGGTATTCCCATTTGGAATATCTCATCATATAATGGCTTATGCTGTATTGCTTTGGCAATGGATATTGACAATCTAGCAGATTTGGTTTTTTTCCAGAATGGAATGCTGGACCCTTGGTATGAAAGCAAAGGTCTAAATGATGTGAATCAAGTGTTAGCATATTTCGCTATCTCAAAGCTGGGAGAGGCTCCTGTGGATGGAATAACGGATACCAATCCTGAAGGTCTGACAGCCGCGTATGGAAAATGGGCATCTGCCGTAGCAGGAAGGCTCAATGCTGCAGGCCTCTCCTGCAAGGTAAATCCACAGAAGAAATGTGCCTCTTATGGAAGTAAACAATGAGATGTTTCATGAATGTTCTTTATAGAAATATGTGTATATGTGTCATTTATGATATTCTTTTATTCCATATACACATTAACTTTAAAGGCTATGTTTGTAAGCTAGGTTCTTGACAAGGAAGCATTTGAGAAACAAATGTTGGAGAAGCTGATTTGGATTTCTGCATTTATGCTCGTTGGAGCACGTCATCCAGGTGCGACCGTGGGTGCTGTGGAAAAGGATTATCGCTCTGAAGTAAGATCCCTTCTTCTTCATGCAATAAGTTTACTGCATAATTCTTCAACTATGTACATTGTGGAATCATTCTTTATAAGGGGTAGAAACCTCTCCCTAGCAAATGCATTTTAAAAATATCGAGGGGAAAGTCCAAAGAGGACAATATATGCTAGCGGTGGACTTGGGGCCGTTACGTATAACAGTCTAATCCAAATTTATAATTGCAGGTTTCTAGCCTCATTGCAGAACTTGCATCTGCAGCCGCAGCTGAAAGGCAGTTGGTGTTTGAAGAAGGTATAGAGGAAAGATTATGTGCATACTCTCGGGCTGTGGCTCACTTCCCCACGGCAGTAAAAGAGGTAGATTAAAATCGAAAGGGAATTCTGGGAGCTCCCTCAATACCTTTTTATTTTTTTTCTTGTGCTAACAATCCCTTTACTTACACAGTTCAAATGGCGAAACGGGTGGTTCTATTCTCTCTCCGAGAAAGCCATTGCTGGTGGAAAACCCGACCCCTGCCCCCTGCATACCGCTTGGCTTGCGGAGCTGAAAGTTATCTAGGAATGACCCTGTATTGCTTGCTATCAAATGGATTTCCTGTTGCACAACGGTTGGCTTTAATCCAAGTGAAGAACTCTCTTTTTGTTTTAAGAAGTAGATTTTGTACCTGTGTTCGTCATCTACAAATCACCTCCAGTTACTTGTTTGAACTGGGCCCAGCCTCTTTCAGTTGGTGATAGAGAAGGATTCATCATCTGTACCATCCTGAACTTCTGAACAGAAAAATCCATCAATAATGTTAAGAGAGATTTAATCAAATTTCTACACATGCGAAGACTCCTTGCGAACAAAAAAAAAAAAACATGAAATTTTACGATGCCAACATTAGAGCAATGTGGAAGGAAATAGCAACCCTAACATTATTGAGGATGGTTGATTTATTGAGGATCGTTGGGAAAGGAGTGAGAGTTTCGGACAATATCAAACTTAGCCATGTCTATGAAATCTCAAGTGTCGAATAGGCAAAAGTGTGACTCAAGTATGAAACTGATGATGTGGTTTGTCTGTGAATTCCAGAGGAGTCAAGTCTCGACTAAAGAGATTGTGAATTCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGGTTGTTCGAGAGCTCCATAGGCCTTAAGGAAGGCTCTATTGTGTACTTTATTTGTAAAGAGGAGTCTCATGTTAGTATAAGGAATACTGTTTCCATT

mRNA sequence

TTCTTTCATAAAAAAGCCCATCGGGCCTATAAACAACTTACAGATAGGTCGGTGGGCGCAGCCATGGCCACAGATCGAGTAGCTTATCTTCTTCTCCGCCACTCAAAGCCGCTCTCTGAAAACCCACGCTGGCTCTCTCTGCTTATACAAACCACACAACAATGTCACTTCAAGCTCACCTGGTTCATTTCCTACTCAGCCATGGCCGCCGCAATTTCCTTCACAATCTCTAGCTCTTCCCTCTGGTCTCGACTTTCTAAACCCGCTTCTAAATTTCGCGATCACCGTCTGAGAATCATGGCCGCGGCTACCGGAACTAAGGTGGTACCCGCTGTGATAGTCGGAAGTGGGCGCGTTGGGAGGGCGCTGCTGGACATGGGAAACGGCGAAGATTTTTTGGTGAAGAGAGGCGAGTCCGTGCCCCTTGATTTTCCAGGTCCTATCCTTGTTTGTACCAGAAATGATGATCTTGAAGCTGTTCTTGAATCCACTCCTCGATCGAGGTGGAACGATTTGGTTTTTTTCCAGAATGGAATGCTGGACCCTTGGTATGAAAGCAAAGGTCTAAATGATGTGAATCAAGTGTTAGCATATTTCGCTATCTCAAAGCTGGGAGAGGCTCCTGTGGATGGAATAACGGATACCAATCCTGAAGGTCTGACAGCCGCGTATGGAAAATGGGCATCTGCCGTAGCAGGAAGGCTCAATGCTGCAGGCCTCTCCTGCAAGGTTCTTGACAAGGAAGCATTTGAGAAACAAATGTTGGAGAAGCTGATTTGGATTTCTGCATTTATGCTCGTTGGAGCACGTCATCCAGCTGAAAGGCAGTTGGTGTTTGAAGAAGGTATAGAGGAAAGATTATGTGCATACTCTCGGGCTGTGGCTCACTTCCCCACGGCAGTAAAAGAGTTCAAATGGCGAAACGGGTGGTTCTATTCTCTCTCCGAGAAAGCCATTGCTGGTGGAAAACCCGACCCCTGCCCCCTGCATACCGCTTGGCTTGCGGAGCTGAAAGTTATCTAGGAATGACCCTGTATTGCTTGCTATCAAATGGATTTCCTGTTGCACAACGGTTGGCTTTAATCCAAGTGAAGAACTCTCTTTTTGTTTTAAGAAGTAGATTTTGTACCTGTGTTCGTCATCTACAAATCACCTCCAGTTACTTGTTTGAACTGGGCCCAGCCTCTTTCAGTTGGTGATAGAGAAGGATTCATCATCTGTACCATCCTGAACTTCTGAACAGAAAAATCCATCAATAATGTTAAGAGAGATTTAATCAAATTTCTACACATGCGAAGACTCCTTGCGAACAAAAAAAAAAAAACATGAAATTTTACGATGCCAACATTAGAGCAATGTGGAAGGAAATAGCAACCCTAACATTATTGAGGATGGTTGATTTATTGAGGATCGTTGGGAAAGGAGTGAGAGTTTCGGACAATATCAAACTTAGCCATGTCTATGAAATCTCAAGTGTCGAATAGGCAAAAGTGTGACTCAAGTATGAAACTGATGATGTGGTTTGTCTGTGAATTCCAGAGGAGTCAAGTCTCGACTAAAGAGATTGTGAATTCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGCCAGAGAAGGAGTCAAGTCCCAACTAAAGAGAGGTTGTTCGAGAGCTCCATAGGCCTTAAGGAAGGCTCTATTGTGTACTTTATTTGTAAAGAGGAGTCTCATGTTAGTATAAGGAATACTGTTTCCATT

Coding sequence (CDS)

ATGGCCACAGATCGAGTAGCTTATCTTCTTCTCCGCCACTCAAAGCCGCTCTCTGAAAACCCACGCTGGCTCTCTCTGCTTATACAAACCACACAACAATGTCACTTCAAGCTCACCTGGTTCATTTCCTACTCAGCCATGGCCGCCGCAATTTCCTTCACAATCTCTAGCTCTTCCCTCTGGTCTCGACTTTCTAAACCCGCTTCTAAATTTCGCGATCACCGTCTGAGAATCATGGCCGCGGCTACCGGAACTAAGGTGGTACCCGCTGTGATAGTCGGAAGTGGGCGCGTTGGGAGGGCGCTGCTGGACATGGGAAACGGCGAAGATTTTTTGGTGAAGAGAGGCGAGTCCGTGCCCCTTGATTTTCCAGGTCCTATCCTTGTTTGTACCAGAAATGATGATCTTGAAGCTGTTCTTGAATCCACTCCTCGATCGAGGTGGAACGATTTGGTTTTTTTCCAGAATGGAATGCTGGACCCTTGGTATGAAAGCAAAGGTCTAAATGATGTGAATCAAGTGTTAGCATATTTCGCTATCTCAAAGCTGGGAGAGGCTCCTGTGGATGGAATAACGGATACCAATCCTGAAGGTCTGACAGCCGCGTATGGAAAATGGGCATCTGCCGTAGCAGGAAGGCTCAATGCTGCAGGCCTCTCCTGCAAGGTTCTTGACAAGGAAGCATTTGAGAAACAAATGTTGGAGAAGCTGATTTGGATTTCTGCATTTATGCTCGTTGGAGCACGTCATCCAGCTGAAAGGCAGTTGGTGTTTGAAGAAGGTATAGAGGAAAGATTATGTGCATACTCTCGGGCTGTGGCTCACTTCCCCACGGCAGTAAAAGAGTTCAAATGGCGAAACGGGTGGTTCTATTCTCTCTCCGAGAAAGCCATTGCTGGTGGAAAACCCGACCCCTGCCCCCTGCATACCGCTTGGCTTGCGGAGCTGAAAGTTATCTAG

Protein sequence

MATDRVAYLLLRHSKPLSENPRWLSLLIQTTQQCHFKLTWFISYSAMAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDKEAFEKQMLEKLIWISAFMLVGARHPAERQLVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI

Homology

[Close]

BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: XP_023547746.1 (uncharacterized protein LOC111806603 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632 bits (1629), Expect = 8.20e-228
Identity = 319/346 (92.20%), Postives = 319/346 (92.20%), Query Frame = 0


Query: 1   MATDRVAYLLLRHSKPLSENPRWLSLLIQTTQQCHFKLTWFISYSAMAAAISFTISSSSL 60
           MATDRVAYLLLRHSKPLSENPRWLSLLIQTTQQCHFKLTWFISYSAMAAAISFTISSSSL
Sbjct: 1   MATDRVAYLLLRHSKPLSENPRWLSLLIQTTQQCHFKLTWFISYSAMAAAISFTISSSSL 60

Query: 61  WSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMGNGEDFLVKRGESVP 120
           WSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMGNGEDFLVKRGESVP
Sbjct: 61  WSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMGNGEDFLVKRGESVP 120

Query: 121 LDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESKGLNDVNQVLAYFAI 180
           LDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESKGLNDVNQVLAYFAI
Sbjct: 121 LDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESKGLNDVNQVLAYFAI 180

Query: 181 SKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDKEAFEKQMLEKLIWI 240
           SKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDKEAFEKQMLEKLIWI
Sbjct: 181 SKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDKEAFEKQMLEKLIWI 240

Query: 241 SAFMLVGARHP---------------------------AERQLVFEEGIEERLCAYSRAV 300
           SAFMLVGARHP                           AERQLVFEEGIEERLCAYSRAV
Sbjct: 241 SAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFEEGIEERLCAYSRAV 300

Query: 301 AHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           AHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI
Sbjct: 301 AHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 346

[Close]

BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: KAG6575639.1 (hypothetical protein SDJN03_26278, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 541 bits (1395), Expect = 3.26e-193
Identity = 271/280 (96.79%), Postives = 271/280 (96.79%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISSSSLWSRLSKPASKFRD RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSSSLWSRLSKPASKFRDRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK
Sbjct: 121 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP-------AERQLVFEEGIEERLCAYSRAVAHFPTA 286
           EAFEKQMLEKLIWISAFMLVGARHP       AERQLVFEEGIEERLCAYSRAVAHFPTA
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPELASAAAAERQLVFEEGIEERLCAYSRAVAHFPTA 240

Query: 287 VKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           VKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWLAELKVI
Sbjct: 241 VKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLAELKVI 280

[Close]

BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: XP_022954230.1 (uncharacterized protein LOC111456547 isoform X1 [Cucurbita moschata])

HSP 1 Score: 534 bits (1375), Expect = 7.60e-190
Identity = 271/300 (90.33%), Postives = 271/300 (90.33%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISSSSLWSRLSKPASKFRD RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSSSLWSRLSKPASKFRDRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK
Sbjct: 121 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWLAELKVI
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLAELKVI 300

[Close]

BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: XP_022991363.1 (uncharacterized protein LOC111488021 isoform X1 [Cucurbita maxima])

HSP 1 Score: 531 bits (1367), Expect = 1.26e-188
Identity = 269/300 (89.67%), Postives = 270/300 (90.00%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISSSSLWSRLSKPASKFRD RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSSSLWSRLSKPASKFRDRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTP+SRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPQSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK
Sbjct: 121 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKVI
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLGELKVI 300

[Close]

BLAST of Cp4.1LG12g07210 vs. NCBI nr
Match: KAG7014193.1 (hypothetical protein SDJN02_24367 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 529 bits (1363), Expect = 5.31e-188
Identity = 271/301 (90.03%), Postives = 271/301 (90.03%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISSSSLWSRLSKPASKFRD RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSSSLWSRLSKPASKFRDRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWN-DLVFFQNGMLDPWYES 166
           NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWN DLVFFQNGMLDPWYES
Sbjct: 61  NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNADLVFFQNGMLDPWYES 120

Query: 167 KGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLD 226
           KGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLD
Sbjct: 121 KGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLD 180

Query: 227 KEAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVF 286
           KEAFEKQMLEKLIWISAFMLVGARHP                           AERQLVF
Sbjct: 181 KEAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVF 240

Query: 287 EEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKV 319
           EEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWLAELKV
Sbjct: 241 EEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLAELKV 300

[Close]

BLAST of Cp4.1LG12g07210 vs. ExPASy TrEMBL
Match: A0A6J1GRW1 (uncharacterized protein LOC111456547 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456547 PE=4 SV=1)

HSP 1 Score: 534 bits (1375), Expect = 3.68e-190
Identity = 271/300 (90.33%), Postives = 271/300 (90.33%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISSSSLWSRLSKPASKFRD RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSSSLWSRLSKPASKFRDRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK
Sbjct: 121 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWLAELKVI
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLAELKVI 300

[Close]

BLAST of Cp4.1LG12g07210 vs. ExPASy TrEMBL
Match: A0A6J1JW05 (uncharacterized protein LOC111488021 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488021 PE=4 SV=1)

HSP 1 Score: 531 bits (1367), Expect = 6.09e-189
Identity = 269/300 (89.67%), Postives = 270/300 (90.00%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISSSSLWSRLSKPASKFRD RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSSSLWSRLSKPASKFRDRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTP+SRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPQSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK
Sbjct: 121 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELASAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKVI
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLGELKVI 300

[Close]

BLAST of Cp4.1LG12g07210 vs. ExPASy TrEMBL
Match: A0A6J1DKB2 (uncharacterized protein LOC111021267 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021267 PE=4 SV=1)

HSP 1 Score: 502 bits (1292), Expect = 1.62e-177
Identity = 256/300 (85.33%), Postives = 261/300 (87.00%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTISS SL  +LSKP SKFR  RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISSPSLRFQLSKPTSKFRVRRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGEDFLVKRGESVPLDF GPILVCTRNDDLEAVLE+TPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDFLVKRGESVPLDFSGPILVCTRNDDLEAVLEATPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GL D NQ+LAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVA RLNAAGLSCKVLDK
Sbjct: 121 GLEDANQLLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVATRLNAAGLSCKVLDK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELACAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           +GIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKV+
Sbjct: 241 DGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKELKVV 300

[Close]

BLAST of Cp4.1LG12g07210 vs. ExPASy TrEMBL
Match: A0A5D3CGL0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001500 PE=4 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 9.33e-177
Identity = 255/300 (85.00%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTIS+ SL S+LSKP S+F   RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISNPSLCSQLSKPVSRFGARRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGED LVKRGESVPLDF GPILVCTRNDDLEAVLE+TPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDVLVKRGESVPLDFSGPILVCTRNDDLEAVLEATPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GL D NQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVL K
Sbjct: 121 GLKDANQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLGK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELACAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKV+
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKELKVV 300

[Close]

BLAST of Cp4.1LG12g07210 vs. ExPASy TrEMBL
Match: A0A1S3CDP5 (uncharacterized protein LOC103499856 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499856 PE=4 SV=1)

HSP 1 Score: 500 bits (1287), Expect = 9.33e-177
Identity = 255/300 (85.00%), Postives = 260/300 (86.67%), Query Frame = 0


Query: 47  MAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 106
           MAAAISFTIS+ SL S+LSKP S+F   RLRIMAAATGTKVVPAVIVGSGRVGRALLDMG
Sbjct: 1   MAAAISFTISNPSLCSQLSKPVSRFGARRLRIMAAATGTKVVPAVIVGSGRVGRALLDMG 60

Query: 107 NGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGMLDPWYESK 166
           NGED LVKRGESVPLDF GPILVCTRNDDLEAVLE+TPRSRWNDLVFFQNGMLDPWYESK
Sbjct: 61  NGEDVLVKRGESVPLDFSGPILVCTRNDDLEAVLEATPRSRWNDLVFFQNGMLDPWYESK 120

Query: 167 GLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLDK 226
           GL D NQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVL K
Sbjct: 121 GLKDANQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAGLSCKVLGK 180

Query: 227 EAFEKQMLEKLIWISAFMLVGARHP---------------------------AERQLVFE 286
           EAFEKQMLEKLIWISAFMLVGARHP                           AERQLVFE
Sbjct: 181 EAFEKQMLEKLIWISAFMLVGARHPGATVGAVEKDYRSEVSSLIAELACAAAAERQLVFE 240

Query: 287 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTAWLAELKVI 319
           EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIA GKPDPCPLHTAWL ELKV+
Sbjct: 241 EGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAAGKPDPCPLHTAWLKELKVV 300

[Close]

BLAST of Cp4.1LG12g07210 vs. TAIR 10
Match: AT1G16080.1 (unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 405.2 bits (1040), Expect = 4.8e-113
Identity = 206/308 (66.88%), Postives = 231/308 (75.00%), Query Frame = 0


Query: 39  TWFISYSAMAAAISFTISSSSLWSRLSKPASKFRDHRLRIMAAATGTKVVPAVIVGSGRV 98
           T F    + +A  SF   S SL   +S+ A       +   +AAT  K+ PAVIVG GRV
Sbjct: 7   TLFAVSCSASARFSFLRRSESLKPSVSR-ARFAVPMAMAAASAATAKKLAPAVIVGGGRV 66

Query: 99  GRALLDMGNGEDFLVKRGESVPLDFPGPILVCTRNDDLEAVLESTPRSRWNDLVFFQNGM 158
           GRAL +MGNGED LVKRGE+VP+DF GPILVCTRNDDL+AVLE+TP+SRW DLVFFQNGM
Sbjct: 67  GRALQEMGNGEDLLVKRGEAVPVDFEGPILVCTRNDDLDAVLEATPQSRWKDLVFFQNGM 126

Query: 159 LDPWYESKGLNDVNQVLAYFAISKLGEAPVDGITDTNPEGLTAAYGKWASAVAGRLNAAG 218
           ++PW+ESKGL D +QVLAYFA+SKLGE PVDG TDTNPEGLTAAYGKWAS +A RL + G
Sbjct: 127 MEPWFESKGLGDTDQVLAYFAVSKLGEPPVDGKTDTNPEGLTAAYGKWASEIAARLQSGG 186

Query: 219 LSCKVLDKEAFEKQMLEKLIWISAFMLVGARHP--------------------------- 278
           LSCKVLDKEAF+KQMLEKLIWI AFMLVGARHP                           
Sbjct: 187 LSCKVLDKEAFQKQMLEKLIWICAFMLVGARHPGASVGTVEKEYRDEVSRLIQELAAAAA 246

Query: 279 AERQLVFEEGIEERLCAYSRAVAHFPTAVKEFKWRNGWFYSLSEKAIAGGKPDPCPLHTA 320
           AE+ L FEE + ERLCAYSRAV+HFPTAVKEFKWRNGWFYSLSEKAIA G+PDPCPLHT 
Sbjct: 247 AEKGLTFEENMVERLCAYSRAVSHFPTAVKEFKWRNGWFYSLSEKAIAEGQPDPCPLHTE 306

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07210 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g07210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547746.1	8.20e-228	92.20	uncharacterized protein LOC111806603 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6575639.1	3.26e-193	96.79	hypothetical protein SDJN03_26278, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954230.1	7.60e-190	90.33	uncharacterized protein LOC111456547 isoform X1 [Cucurbita moschata]	[more]
XP_022991363.1	1.26e-188	89.67	uncharacterized protein LOC111488021 isoform X1 [Cucurbita maxima]	[more]
KAG7014193.1	5.31e-188	90.03	hypothetical protein SDJN02_24367 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG12g07210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRW1	3.68e-190	90.33	uncharacterized protein LOC111456547 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JW05	6.09e-189	89.67	uncharacterized protein LOC111488021 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1DKB2	1.62e-177	85.33	uncharacterized protein LOC111021267 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A5D3CGL0	9.33e-177	85.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CDP5	9.33e-177	85.00	uncharacterized protein LOC103499856 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG12g07210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16080.1	4.8e-113	66.88	unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloropl...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34044:SF2	BNAA06G10780D PROTEIN	coord: 252..319
None	No IPR available	PANTHER	PTHR34044:SF2	BNAA06G10780D PROTEIN	coord: 53..252
None	No IPR available	PANTHER	PTHR34044	NUCLEAR PROTEIN	coord: 252..319
None	No IPR available	PANTHER	PTHR34044	NUCLEAR PROTEIN	coord: 53..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07210.1	Cp4.1LG12g07210.1	mRNA