Cp4.1LG12g07150 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG12g07150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProtein of Unknown Function (DUF239)
LocationCp4.1LG12: 7161622 .. 7164263 (+)
RNA-Seq ExpressionCp4.1LG12g07150
SyntenyCp4.1LG12g07150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGCAAGATGGCGTCGGCAGTTAGTGTTGGACAGTAGCAAACTGGGGAAGGGCATGGCGTAAAAAACATATCAACAATAACAATTTAATTTTAATTTTAATTTTAATTTTAATTGTGCACTTCTTTCTGGGAATCAGCCACTAACCCATTCGATTCCATAAAGCTCTTCAACTTTTTCCTCTCAAAATTCGCTGAAATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGGTCATAAAACCTCTCAATTCTTCAAATTTTGTGCTTCTTTTTTCCATGAAGAACTGAAAATGGTTTTTGATTGAAAAAAACAGAGTCCAGACGGCGATGTAATCGATTGTGTTCATATGGCTCATCAGCCAGCTTTTGATCATCCTCTTCTCAGAAACCACACGATTCAGGTCTGTTTTTTCTTCTGGGTTTTCTTCTTTTGTTCTGAGGATGAAAATGGTTGTTGTTTTTTGTTTCAGATGAGACCAAATTTTCATCCAGAAGGGGTTTTCAGTGACAGTAAAGTAACTTCAAGAGCTTCGATAACTCAATTATGGCACTTGAAAGGAAGGTGCCCAGAAGGGACGATTCCCATTAGAAGAACGAAAAGAGATGATATTTTAAGAGCAAGCTCTGTGGAAAGCTACGGCAAAAAGAGGGCTCATGCCACTGTGAAACCAAGCTCCATTGATATCGATTTCAATGCCCAAAATGGACATCAGGTACTTGAAGAAACAGAGTATTTTCACCATTCCCCAAAAGGGTCTTTCTTAAATCTGCGTTTTTTTTGCTTTTGGAGTTGTTAGCATGCAATAACTTATGTTGAAGGAGGACAATACTATGGAGCTAAGGCAACCATGAACGTTTGGTCACCTAAAATCGAACAGACCAACGAATTCAGCCTCTCGCAGATTTGGATTCTTGGAGGAACTTTTGGGGAAGATCTTAATAGCATTGAAGCTGGTTGGCAGGTTTATGAACTGTTCTTAATTATCGACTTTTTTCTAGAAATTTGGCTGAAAGATTTCGATTATCTGAGCAAGTTTTTGTTTGTTCTTCTAAACAGGTTAGCCCTGATTTGTATGGAGATAACAATACTCGACTTTTCACTTATTGGACTGTAAGTTGTTCTTGGTGTTCTGCTTTCAATTTTCATGAACTTTGATTCAAAACTCTGAAGAATTGAACTTGGATCGATGTTTCTCTCTAACAGAGTGATGCATATCAAGCCACTGGCTGCTACAATCTGCTCTGTTCTGGGTTTGTCCAAATCAACAATGACATAGCCATGGGTGCCAGCATTTATCCCATTTCTTCTTACAAAGGCTCTCAATATGACATTAGCTTGCTCATCTGGAAGGTGAGTTCTAAGAAAAATTTGATTTTTCCTCAAATTTTGAGCTGGGTTTTGATCAAAACAGGAAAAGAATTAGAAATCTCACGAACCCACTTGAATTTTCTTCCAAATTTGAGCTGGGTTTTAATCAAAACAGGAACAAAACAGGGGAAATCTCACTTATTCTCTTGAATTTTCTTCAAATTTTGATGAAAACAGGGGAAACAGAGATACCCACTTGAATGTTCATCAAAATATGAACTGGGAGTTCATAAAAAAAACAAAAACTTTACAAATTACAAGTGATTTTAGCCACCTACTCGAAAACTTTGATGAAAACCAGAGAAAGGCTGACAAACATGTCCAACTTTTTGCGCCCATCCATTAAAGTGTTCTGAGTTGTTGTCTAATTGGTAGGACCCTAAAGAAGGAAACTGGTGGATGCAATTCGGGAATAGCCACGTTTTGGGGTATTGGCCGGCGTTCTTATTCTCATACCTCACCGACAGCGCCTCCATGATCGAGTGGGGCGGCGAAGTCGTCAACTCTGAACCCGACGGCCAACACACTTCCACTCAGATGGGCAGCGGCCACTTCCCCGACCAGGGCTTCGCCAACGCCGCCTACTTTCGTAACATCCAGGTTCCTTAATCATCCCTTCCCTTCATAAACTTGATTAAATTAGGGTAATTAATTATCATCTTTGTTAATTGATGTTGGATTAAGCCAGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGATTTTAAATTATCAAATATATATATATATATATAAATGCATTTCTTGTGCATTATTAATTAATTATATATATATATGTATATTTTGATGTTTCTTTTAACTCATCAATGCTTTTCTTTTTAATCTCTTTGGGAAAATTGTGTATAAGTCTGCTTAATTTCTTCTTCTTTTGAATTAATTTATATAATAGATTCCATTCCAGCTGGTTTTATTTTATTACAAAACTTAAATACTATAATGTTGGTATTTTATGGTCTTTTTTCTTGTGATTTTGATCTTTGTACTCGGAACCATCAATCTGTCGTGTTTGGA

mRNA sequence

CAAGCAAGATGGCGTCGGCAGTTAGTGTTGGACAGTAGCAAACTGGGGAAGGGCATGGCGTAAAAAACATATCAACAATAACAATTTAATTTTAATTTTAATTTTAATTTTAATTGTGCACTTCTTTCTGGGAATCAGCCACTAACCCATTCGATTCCATAAAGCTCTTCAACTTTTTCCTCTCAAAATTCGCTGAAATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGATGAGACCAAATTTTCATCCAGAAGGGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGATTTTAAATTATCAAATATATATATATATATATAAATGCATTTCTTGTGCATTATTAATTAATTATATATATATATGTATATTTTGATGTTTCTTTTAACTCATCAATGCTTTTCTTTTTAATCTCTTTGGGAAAATTGTGTATAAGTCTGCTTAATTTCTTCTTCTTTTGAATTAATTTATATAATAGATTCCATTCCAGCTGGTTTTATTTTATTACAAAACTTAAATACTATAATGTTGGTATTTTATGGTCTTTTTTCTTGTGATTTTGATCTTTGTACTCGGAACCATCAATCTGTCGTGTTTGGA

Coding sequence (CDS)

ATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGATGAGACCAAATTTTCATCCAGAAGGGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGA

Protein sequence

MGALKLLLLLILVSLSLMAAAGKSPRHRHRHRWLEAHTHMKKLNKPHLKSIKMRPNFHPEGIVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Homology
[Close]
BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: XP_023549236.1 (uncharacterized protein LOC111807656 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116 bits (290), Expect = 3.78e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 360 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 409

[Close]
BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: XP_022991895.1 (uncharacterized protein LOC111488398 [Cucurbita maxima])

HSP 1 Score: 116 bits (290), Expect = 3.83e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 361 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 410

[Close]
BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: XP_022953210.1 (uncharacterized protein LOC111455822 [Cucurbita moschata])

HSP 1 Score: 116 bits (290), Expect = 3.88e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 362 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 411

[Close]
BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: KAG7014200.1 (hypothetical protein SDJN02_24375, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116 bits (290), Expect = 5.10e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 385 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 434

[Close]
BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: KAG6575651.1 (hypothetical protein SDJN03_26290, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116 bits (290), Expect = 5.81e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 397 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 446

[Close]
BLAST of Cp4.1LG12g07150 vs. ExPASy TrEMBL
Match: A0A6J1JU76 (uncharacterized protein LOC111488398 OS=Cucurbita maxima OX=3661 GN=LOC111488398 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.85e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 361 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 410

[Close]
BLAST of Cp4.1LG12g07150 vs. ExPASy TrEMBL
Match: A0A6J1GP09 (uncharacterized protein LOC111455822 OS=Cucurbita moschata OX=3662 GN=LOC111455822 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.88e-28
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 111
           IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
Sbjct: 362 IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL 411

[Close]
BLAST of Cp4.1LG12g07150 vs. ExPASy TrEMBL
Match: A0A5A7UWW3 (Neprosin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001460 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 3.91e-24
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 110
           IVG SN+LRAPEDI  FTEQPSCYDVQ GKSDDWGNYFFYGGPGRNPNC
Sbjct: 284 IVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDDWGNYFFYGGPGRNPNC 332

[Close]
BLAST of Cp4.1LG12g07150 vs. ExPASy TrEMBL
Match: A0A0A0KBL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430210 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 1.08e-23
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 110
           IVG SN+LRAPEDI  FTEQPSCYDVQ GKSDDWGNYFFYGGPGRNPNC
Sbjct: 369 IVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDDWGNYFFYGGPGRNPNC 417

[Close]
BLAST of Cp4.1LG12g07150 vs. ExPASy TrEMBL
Match: A0A1S3CE73 (LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 OS=Cucumis melo OX=3656 GN=LOC103499872 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 1.09e-23
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 110
           IVG SN+LRAPEDI  FTEQPSCYDVQ GKSDDWGNYFFYGGPGRNPNC
Sbjct: 370 IVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDDWGNYFFYGGPGRNPNC 418

[Close]
BLAST of Cp4.1LG12g07150 vs. TAIR 10
Match: AT3G13510.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 87.4 bits (215), Expect = 7.7e-18
Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V GSNNL+AP+ + TFTE+ +CYDVQTG +DDWG+YF+YGGPG+N NC
Sbjct: 370 VVDGSNNLKAPKGLGTFTEKSNCYDVQTGSNDDWGHYFYYGGPGKNKNC 418

[Close]
BLAST of Cp4.1LG12g07150 vs. TAIR 10
Match: AT1G55360.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V GSNNL+AP+ + TFTEQ +CYDVQTG +DDWG+YF+YGGPG+N  C
Sbjct: 373 VVDGSNNLKAPKGLGTFTEQSNCYDVQTGSNDDWGHYFYYGGPGKNQKC 421

[Close]
BLAST of Cp4.1LG12g07150 vs. TAIR 10
Match: AT5G56530.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V  SNNL+ P+ + TFTE+ +CYDV+ GK+DDWG+YF+YGGPGRNPNC
Sbjct: 371 VVDSSNNLKEPKGLNTFTEKSNCYDVEVGKNDDWGHYFYYGGPGRNPNC 419

[Close]
BLAST of Cp4.1LG12g07150 vs. TAIR 10
Match: AT5G56530.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 85.5 bits (210), Expect = 2.9e-17
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V  SNNL+ P+ + TFTE+ +CYDV+ GK+DDWG+YF+YGGPGRNPNC
Sbjct: 371 VVDSSNNLKEPKGLNTFTEKSNCYDVEVGKNDDWGHYFYYGGPGRNPNC 419

[Close]
BLAST of Cp4.1LG12g07150 vs. TAIR 10
Match: AT2G44210.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 78.2 bits (191), Expect = 4.7e-15
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0 

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V GSN LR PE++  FT+Q +CY+V++G    WG+YF+YGGPGRNPNC
Sbjct: 366 VVDGSNELRNPENLQVFTDQENCYNVKSGNGGSWGSYFYYGGPGRNPNC 414

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g07150 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023549236.13.78e-28100.00uncharacterized protein LOC111807656 [Cucurbita pepo subsp. pepo][more]
XP_022991895.13.83e-28100.00uncharacterized protein LOC111488398 [Cucurbita maxima][more]
XP_022953210.13.88e-28100.00uncharacterized protein LOC111455822 [Cucurbita moschata][more]
KAG7014200.15.10e-28100.00hypothetical protein SDJN02_24375, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6575651.15.81e-28100.00hypothetical protein SDJN03_26290, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Cp4.1LG12g07150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JU761.85e-28100.00uncharacterized protein LOC111488398 OS=Cucurbita maxima OX=3661 GN=LOC111488398... [more]
A0A6J1GP091.88e-28100.00uncharacterized protein LOC111455822 OS=Cucurbita moschata OX=3662 GN=LOC1114558... [more]
A0A5A7UWW33.91e-2489.80Neprosin 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001460 PE... [more]
A0A0A0KBL11.08e-2389.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430210 PE=4 SV=1[more]
A0A1S3CE731.09e-2389.80LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 OS=Cucumis melo OX=365... [more]
BLAST of Cp4.1LG12g07150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13510.17.7e-1867.35Protein of Unknown Function (DUF239) [more]
AT1G55360.11.3e-1767.35Protein of Unknown Function (DUF239) [more]
AT5G56530.12.9e-1765.31Protein of Unknown Function (DUF239) [more]
AT5G56530.22.9e-1765.31Protein of Unknown Function (DUF239) [more]
AT2G44210.14.7e-1559.18Protein of Unknown Function (DUF239) [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004314NeprosinPFAMPF03080Neprosincoord: 66..104
e-value: 2.8E-6
score: 26.8
NoneNo IPR availablePANTHERPTHR31589:SF134SUBFAMILY NOT NAMEDcoord: 61..109
NoneNo IPR availablePANTHERPTHR31589PROTEIN, PUTATIVE (DUF239)-RELATED-RELATEDcoord: 61..109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07150.1Cp4.1LG12g07150.1mRNA