Cp4.1LG12g06870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGCTATACTTTCCGCGAGATGATCGTGAGCTCATTTACTTGATAATAATCATGGGCCAGCCCATTATAACGGATAGGATTACTGGACCACGAGGCCCAATTCAGCTACGGCCCAATTCAGCTACGGCCCATATAACGAAGAGAGTTGCGCATTTATTTGCTATTTCAAAAGAAAAAGGCAGAAAAAATCCTCAAAGTTTCCAATTCAGCTGTGAAATTCATGGCAGCTGATAGACAGTCCCAGGGATTTCAATTTGGTCTCTCGCACATCTCAAAAGGCCACTCCTTGTCTCCTTCCCCTTTTCCTTCATTTTTTTTTAGGCAGGCCGCCGCCACTCCTTTCCTTTTGCCTTCTCATCTTCCTCAAAGTCCATGTGTTAGAGCCGTAGAGCCACAGGCTTCCTCTCATTTATCCCATATTTATTCCCCTTCCGGACATCGCTTTTTCCCACTTTCTCCTTCGCCATGGCTCGTGTTTGCGACCTACAGTCTCTTTCATCGCTATTTGCGTCTCGCCCAACAATACCCAGATCCTCAAATTTCAAACCCATTTGTTCTTTTCACTGCTCTTCTTCTTCTTCGCCATTTACCGAGAAACATTCCGTGAAGAGATACCAAAGAGACGATTGGCTGTACAAGAACCAAGCGGATGAAAGTTCTGTTGCTTCATCGTGTTCTATTCCGTCTGATTCTGAGTCTATACGGCAGAATGACATTGCCTTGCAGCTGCCGGAGCTGAAGAAATTGCTGCAGGTGCTGAGGGAAAAGAGGGCAAGTAGTGGTTGCGATGATGGGAAATGTGGGCCGGGGAATGTGTTTTTGGTGGGGACTGGCCCTGGAGATCCTGAGCTTTTGACATTGAAGGCGGTGAAAGTGATTCAGAGTGCTGATTTGCTTTTGTATGATCGATTGGTTTCTAATGATGTGTTGGATTTGGTGGGTTCTGATGCTAGGCTTCTCTATGTGGGGAAGACGGCTGGTTTCCATAGCAGAACCCAGGTGAGCTTTTTCTTCTGAAAATCTCTACTTAATATGGGTTTGGTTTGGCTTTTTTTGAGATTGTTGCTGAATGGGTATTTGTTTAGGAGGAGATTCATGAGTTACTTCTGAACTTTGCTGAAGCTGGAGCTACAGTTGTGAGGCTTAAAGGAGGAGACCCTCTTGTAAGTGTGCATTTCGAATGGCTCATTCAAATGATTTTTAGTGATGCATCCTGAAAATTCTGTTGTTTGTATTCCTTTTAGGTGTTTGGAAGGGGTGGGGAGGAGATGGATTTCTTGCAACAGCAAGGGATTCAAGTCAAAATTGTTCCTGGTAAGTGCATTTCTGAATTCTGTTCTTCAGTCCCTTCAGAAGTGGATGGACCATATTAGGTTAGAATGTAACACCTGTTTGGGATGGCTAAAGTCGTAGGGAAGGCACTCGTAGGTCCTTGCTCCCAGCGAGGCTTACGTTCTAACACATCGACGTAGAGCATTTCTATGAGATCCCACATTGGTGGGGAGGGGAACGAAGCATTCTTTATAAGGACGTGGAAATCTCTCCCTAGCATATACGTTTATAACCTTGAGGGGGAGCTCAAAAGGGAAAGCCTAAAGAGAATAACATCGGTTAGCGGTACCTATTTTCTGTTCTTGCTCCTTCCAAACGAAGAGAATGGAGTGATATTAAGTTATGTGGAATAGAACCAGGAGTAAGAAATTAGGTAAGATGGGCTCGAGTACCTGAGGACGATTTGGTTACAAGGTCTCTTGAATTCGCTTCGTGCTCGTAATCAATCATTGAACTGTCATTAACATATCACATTCTGATTGCCAATGCACCACCAGTTTAAGGAAACTACTCTTAAGAGTAACCTTTGTTTCCCTTGCAGGGATAACTGCGGCTTCGGGTATAGCTGCTGAATTGGGAATTCCTTTGACACACAGGGGCGTTGCGACAAGTGTCAGGTTCCTCACTGGTCACTCGAGACAGGGTGGAACGGATCCTCTATTTGTGGCAGAGAATGCAGCTGATCCAGATTCAACTCTGGTGGTATACATGGGTCTATCAACTCTTCCATCTCTGGCCCTTAAGTTGATGCATCATGGTCTGCCCCCTGATACCCCAGCTGCTGCCATTGAACGAGGGACAACACCCCAACAAAGAATAGTAAGCACAATTCTCTGCTGCCTTCAACTTTTGTTCTGAGTTGGGTAGGGTTCAACCAAACACTCTTAACGTGTCGGTTCGTTACCATTCTAGCAAATCTACTTAAACCAGGAGATCTCTCTGCGTTGAGCTACTTTTTCAGTGACATCTGGATCTAGACTTTAATATCAAGGGGGCAGGGCATACTTTCACTTAAGTCTTTTCATTTCATCTTGGTCGTGCCTTGAACAAATCTTGCTTGGATCTATTCCATTTGTGCAGGTTTTTGCAGAACTGAAGGATCTTGCAGATGAAATCAAAGCAGCAGAGTTGGTTTCACCTACTTTGATTATAATTGGAAAAGTGGTTTCTCTCTCACCACATTGGTCACTTTCCTCCAAAGAAGCCTCCAGTTTGGTGGAGGCTTAACTGAGTTAAAAGTGTCTACAAAAGGTTACAGGAATAGTTCTTCATTCTGTCGCTTAAAAAGCTCTGGACGTCGAGTTTTTCCACAAGATCTTGTCGATTTTGTGGAGAAAAACATTGAAACCATGACAGAGCAGAAAAAGAAGAATAGGGGACTCGTCTTTCTGTTCTGCATTTTATTGGTCTGCCCATTGCCTTCAAATGGCTGGACTCGGGTTTTCTGCGAAGGACGGGAGTGATGCAGTGGTTTTCCTCCTTGGATGCTACTACCGGAGCACGGTGAGCAGCATCTCCTCATACCATTTCTTGCATTGATTGAAATAGAACCTCCAAACTTCAATTTTTTCTTAGTTCATGTTCATGAGGCCTCTGGTGCAATGAGATTACTTTATCACCAACCAATGTATTGTAGAATTGTCTTTTATCTTGAGTAGAACTTCTACAAATAACAAAGAAATACAGACTACGAACGGCAAGCTCGTAAATATTGTAGAACTTCACCTCAAATATGACCTCATAGTTCCTGCAGTCTGGATTTGTGAATAATAAGGTTTCACTCCAAATGTCATTAAAAAAAACATATATACGATATTCTAATCACTACTCCATAATCTCTCCTTCCTCCAGTTCTTCAACTCCCTTGGAAAAGTCTCCTTCCCAATCAAGAAAATCATCTGGATTGATTTGTGCCATGATATTTGAGTAAGTATCTATCAGATCTTGCTCAAAATCAAACTCCAATCCTTTCGAAACCGCTATCTCCTCGGCCTGGGAGCTTGAATTCGGGCCATTCCCAAACTCATGCTTCCCCATCAAATCT CGGCTATACTTTCCGCGAGATGATCGTGAGCTCATTTACTTGATAATAATCATGGGCCAGCCCATTATAACGGATAGGATTACTGGACCACGAGGCCCAATTCAGCTACGGCCCAATTCAGCTACGGCCCATATAACGAAGAGAGTTGCGCATTTATTTGCTATTTCAAAAGAAAAAGGCAGAAAAAATCCTCAAAGTTTCCAATTCAGCTGTGAAATTCATGGCAGCTGATAGACAGTCCCAGGGATTTCAATTTGGTCTCTCGCACATCTCAAAAGGCCACTCCTTGTCTCCTTCCCCTTTTCCTTCATTTTTTTTTAGGCAGGCCGCCGCCACTCCTTTCCTTTTGCCTTCTCATCTTCCTCAAAGTCCATGTGTTAGAGCCGTAGAGCCACAGGCTTCCTCTCATTTATCCCATATTTATTCCCCTTCCGGACATCGCTTTTTCCCACTTTCTCCTTCGCCATGGCTCGTGTTTGCGACCTACAGTCTCTTTCATCGCTATTTGCGTCTCGCCCAACAATACCCAGATCCTCAAATTTCAAACCCATTTGTTCTTTTCACTGCTCTTCTTCTTCTTCGCCATTTACCGAGAAACATTCCGTGAAGAGATACCAAAGAGACGATTGGCTGTACAAGAACCAAGCGGATGAAAGTTCTGTTGCTTCATCGTGTTCTATTCCGTCTGATTCTGAGTCTATACGGCAGAATGACATTGCCTTGCAGCTGCCGGAGCTGAAGAAATTGCTGCAGGTGCTGAGGGAAAAGAGGGCAAGTAGTGGTTGCGATGATGGGAAATGTGGGCCGGGGAATGTGTTTTTGGTGGGGACTGGCCCTGGAGATCCTGAGCTTTTGACATTGAAGGCGGTGAAAGTGATTCAGAGTGCTGATTTGCTTTTGTATGATCGATTGGTTTCTAATGATGTGTTGGATTTGGTGGGTTCTGATGCTAGGCTTCTCTATGTGGGGAAGACGGCTGGTTTCCATAGCAGAACCCAGGAGGAGATTCATGAGTTACTTCTGAACTTTGCTGAAGCTGGAGCTACAGTTGTGAGGCTTAAAGGAGGAGACCCTCTTGTGTTTGGAAGGGGTGGGGAGGAGATGGATTTCTTGCAACAGCAAGGGATTCAAGTCAAAATTGTTCCTGGGATAACTGCGGCTTCGGGTATAGCTGCTGAATTGGGAATTCCTTTGACACACAGGGGCGTTGCGACAAGTGTCAGGTTCCTCACTGGTCACTCGAGACAGGGTGGAACGGATCCTCTATTTGTGGCAGAGAATGCAGCTGATCCAGATTCAACTCTGGTGGTATACATGGGTCTATCAACTCTTCCATCTCTGGCCCTTAAGTTGATGCATCATGGTCTGCCCCCTGATACCCCAGCTGCTGCCATTGAACGAGGGACAACACCCCAACAAAGAATAGTTTTTGCAGAACTGAAGGATCTTGCAGATGAAATCAAAGCAGCAGAGTTGGTTTCACCTACTTTGATTATAATTGGAAAAGTGGTTTCTCTCTCACCACATTGGTCACTTTCCTCCAAAGAAGCCTCCAGTTTGGTGGAGGCTTAACTGAGTTAAAAGTGTCTACAAAAGGTTACAGGAATAGTTCTTCATTCTGTCGCTTAAAAAGCTCTGGACGTCGAGTTTTTCCACAAGATCTTGTCGATTTTGTGGAGAAAAACATTGAAACCATGACAGAGCAGAAAAAGAAGAATAGGGGACTCGTCTTTCTGTTCTGCATTTTATTGGTCTGCCCATTGCCTTCAAATGGCTGGACTCGGGTTTTCTGCGAAGGACGGGAGTGATGCAGTGGTTTTCCTCCTTGGATGCTACTACCGGAGCACGGTGAGCAGCATCTCCTCATACCATTTCTTGCATTGATTGAAATAGAACCTCCAAACTTCAATTTTTTCTTAGTTCATGTTCATGAGGCCTCTGGTGCAATGAGATTACTTTATCACCAACCAATGTATTGTAGAATTGTCTTTTATCTTGAGTAGAACTTCTACAAATAACAAAGAAATACAGACTACGAACGGCAAGCTCGTAAATATTGTAGAACTTCACCTCAAATATGACCTCATAGTTCCTGCAGTCTGGATTTGTGAATAATAAGGTTTCACTCCAAATGTCATTAAAAAAAACATATATACGATATTCTAATCACTACTCCATAATCTCTCCTTCCTCCAGTTCTTCAACTCCCTTGGAAAAGTCTCCTTCCCAATCAAGAAAATCATCTGGATTGATTTGTGCCATGATATTTGAGTAAGTATCTATCAGATCTTGCTCAAAATCAAACTCCAATCCTTTCGAAACCGCTATCTCCTCGGCCTGGGAGCTTGAATTCGGGCCATTCCCAAACTCATGCTTCCCCATCAAATCT ATGGCTCGTGTTTGCGACCTACAGTCTCTTTCATCGCTATTTGCGTCTCGCCCAACAATACCCAGATCCTCAAATTTCAAACCCATTTGTTCTTTTCACTGCTCTTCTTCTTCTTCGCCATTTACCGAGAAACATTCCGTGAAGAGATACCAAAGAGACGATTGGCTGTACAAGAACCAAGCGGATGAAAGTTCTGTTGCTTCATCGTGTTCTATTCCGTCTGATTCTGAGTCTATACGGCAGAATGACATTGCCTTGCAGCTGCCGGAGCTGAAGAAATTGCTGCAGGTGCTGAGGGAAAAGAGGGCAAGTAGTGGTTGCGATGATGGGAAATGTGGGCCGGGGAATGTGTTTTTGGTGGGGACTGGCCCTGGAGATCCTGAGCTTTTGACATTGAAGGCGGTGAAAGTGATTCAGAGTGCTGATTTGCTTTTGTATGATCGATTGGTTTCTAATGATGTGTTGGATTTGGTGGGTTCTGATGCTAGGCTTCTCTATGTGGGGAAGACGGCTGGTTTCCATAGCAGAACCCAGGAGGAGATTCATGAGTTACTTCTGAACTTTGCTGAAGCTGGAGCTACAGTTGTGAGGCTTAAAGGAGGAGACCCTCTTGTGTTTGGAAGGGGTGGGGAGGAGATGGATTTCTTGCAACAGCAAGGGATTCAAGTCAAAATTGTTCCTGGGATAACTGCGGCTTCGGGTATAGCTGCTGAATTGGGAATTCCTTTGACACACAGGGGCGTTGCGACAAGTGTCAGGTTCCTCACTGGTCACTCGAGACAGGGTGGAACGGATCCTCTATTTGTGGCAGAGAATGCAGCTGATCCAGATTCAACTCTGGTGGTATACATGGGTCTATCAACTCTTCCATCTCTGGCCCTTAAGTTGATGCATCATGGTCTGCCCCCTGATACCCCAGCTGCTGCCATTGAACGAGGGACAACACCCCAACAAAGAATAGTTTTTGCAGAACTGAAGGATCTTGCAGATGAAATCAAAGCAGCAGAGTTGGTTTCACCTACTTTGATTATAATTGGAAAAGTGGTTTCTCTCTCACCACATTGGTCACTTTCCTCCAAAGAAGCCTCCAGTTTGGTGGAGGCTTAA MARVCDLQSLSSLFASRPTIPRSSNFKPICSFHCSSSSSPFTEKHSVKRYQRDDWLYKNQADESSVASSCSIPSDSESIRQNDIALQLPELKKLLQVLREKRASSGCDDGKCGPGNVFLVGTGPGDPELLTLKAVKVIQSADLLLYDRLVSNDVLDLVGSDARLLYVGKTAGFHSRTQEEIHELLLNFAEAGATVVRLKGGDPLVFGRGGEEMDFLQQQGIQVKIVPGITAASGIAAELGIPLTHRGVATSVRFLTGHSRQGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPDTPAAAIERGTTPQQRIVFAELKDLADEIKAAELVSPTLIIIGKVVSLSPHWSLSSKEASSLVEA Homology
BLAST of Cp4.1LG12g06870 vs. ExPASy Swiss-Prot
Match: Q42606 (S-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=UPM1 PE=1 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 4.4e-147 Identity = 274/347 (78.96%), Postives = 295/347 (85.01%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy Swiss-Prot
Match: B8GUD3 (Siroheme synthase OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=cysG PE=3 SV=1) HSP 1 Score: 243.0 bits (619), Expect = 5.1e-63 Identity = 125/252 (49.60%), Postives = 170/252 (67.46%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy Swiss-Prot
Match: A0KP37 (Siroheme synthase 2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=cysG2 PE=3 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 4.3e-62 Identity = 132/252 (52.38%), Postives = 172/252 (68.25%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy Swiss-Prot
Match: Q0VQ05 (Siroheme synthase OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=cysG PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.3e-61 Identity = 120/239 (50.21%), Postives = 162/239 (67.78%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy Swiss-Prot
Match: Q6F8G6 (Siroheme synthase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=cysG PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 2.2e-61 Identity = 124/237 (52.32%), Postives = 163/237 (68.78%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: XP_023548332.1 (uncharacterized protein LOC111807000 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 716 bits (1847), Expect = 8.02e-260 Identity = 368/368 (100.00%), Postives = 368/368 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: XP_022991905.1 (uncharacterized protein LOC111488402 [Cucurbita maxima]) HSP 1 Score: 708 bits (1828), Expect = 6.32e-257 Identity = 364/368 (98.91%), Postives = 366/368 (99.46%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: XP_022954326.1 (uncharacterized protein LOC111456604 [Cucurbita moschata]) HSP 1 Score: 704 bits (1817), Expect = 3.90e-255 Identity = 367/375 (97.87%), Postives = 367/375 (97.87%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: KAG6575668.1 (hypothetical protein SDJN03_26307, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 702 bits (1813), Expect = 1.37e-254 Identity = 365/371 (98.38%), Postives = 366/371 (98.65%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. NCBI nr
Match: KAG7014220.1 (cysG, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 681 bits (1758), Expect = 2.18e-246 Identity = 354/360 (98.33%), Postives = 355/360 (98.61%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy TrEMBL
Match: A0A6J1JU84 (uncharacterized protein LOC111488402 OS=Cucurbita maxima OX=3661 GN=LOC111488402 PE=3 SV=1) HSP 1 Score: 708 bits (1828), Expect = 3.06e-257 Identity = 364/368 (98.91%), Postives = 366/368 (99.46%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy TrEMBL
Match: A0A6J1GQM1 (uncharacterized protein LOC111456604 OS=Cucurbita moschata OX=3662 GN=LOC111456604 PE=3 SV=1) HSP 1 Score: 704 bits (1817), Expect = 1.89e-255 Identity = 367/375 (97.87%), Postives = 367/375 (97.87%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy TrEMBL
Match: A0A1S3CDT8 (uroporphyrinogen-III C-methyltransferase OS=Cucumis melo OX=3656 GN=LOC103499894 PE=3 SV=1) HSP 1 Score: 669 bits (1726), Expect = 1.24e-241 Identity = 342/372 (91.94%), Postives = 355/372 (95.43%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy TrEMBL
Match: A0A0A0KBI8 (TP_methylase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428980 PE=3 SV=1) HSP 1 Score: 664 bits (1713), Expect = 1.19e-239 Identity = 340/372 (91.40%), Postives = 355/372 (95.43%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. ExPASy TrEMBL
Match: A0A6J1D4K3 (uncharacterized protein LOC111017535 OS=Momordica charantia OX=3673 GN=LOC111017535 PE=3 SV=1) HSP 1 Score: 649 bits (1673), Expect = 1.32e-233 Identity = 333/369 (90.24%), Postives = 350/369 (94.85%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. TAIR 10
Match: AT5G40850.1 (urophorphyrin methylase 1 ) HSP 1 Score: 522.3 bits (1344), Expect = 3.1e-148 Identity = 274/347 (78.96%), Postives = 295/347 (85.01%), Query Frame = 0
BLAST of Cp4.1LG12g06870 vs. TAIR 10
Match: AT5G40850.2 (urophorphyrin methylase 1 ) HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-131 Identity = 244/317 (76.97%), Postives = 263/317 (82.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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