Cp4.1LG12g06460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g06460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Autophagy-related protein
Location	Cp4.1LG12: 7571372 .. 7576163 (+)
RNA-Seq Expression	Cp4.1LG12g06460
Synteny	Cp4.1LG12g06460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGCTATCCCCGCTTAGTTGTTGACTTATAAAATAAAACTTAAATAAGTGTTTCTATTATCTTTCTCTTTTTATTCATCTTCCGAGTTCTTTCATTTTGGACGGCATCGCAAAGAGATCGCTAATGGGAAAAACCAAATCCTTCAAAGATGAGTTCACCTACGGTATGATTGATCTTTTGTGCCTTGAAATTGCAGCTGATTATCGTTACTTTTCTCTCGTTTGATATTTTTGGAGATCATTGTATAATTACGGCGTTGATTTTTTTCATAGAACAACGATTTGCGGAGTCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCTGTAAGTTGCAAAATTCTCATCATATGTATCTTTGACTAGAGAAGATTCAGTTCTAGATGCGTCTGTATCGGATTTTGTCGAGAAATTATTCTAGATAATGGTGAATTTGTGAATTTAGTCGATATATAATATCGGTGACTCGGAGAGTCGGTAGGTGTCGAATTCTTTGGTTCTTATTGTTCTTCATCTTTAAGAAATCTCTGCCAATGGCTCGCGTAATTTGCTATGAATGATGCTTTCCAAATAAGTCCTCTCGGCAAATGAAGTTCTAAAGTTATCAGATTATTTCCGTCAACGTTTCCTTTGCTATCCAAGAACAAAATTGTATGTGGATAGAAGATGCTTGTTGATTGTCTTCAAGCGATGCAACGGTGACTTCGATTTTGGTCGCCTTGAACAGAGCTATAGAATTGTTGCTAAAATTCAATGCCACGGAAAATAATATCCTGTCTGAATTATGTAATCTTCTTACATTTTTGAGGTGTACATGCTAGAGAGATATTCATTTCCTCCAGAATCCATGAAAGTGAAATAATGGTTTCCTTTTGATGTTTCGACTATAATTGCAGGTAATTGTTGAGAGATATGAGAAATGTGAACTTCCAGAGATGGAAAAGAAGAAGTGAGTTTCTCAATCTCCACCATTTCTGAGCTTCCTCAATGTTTCAGTTCTACTGATTTCATTTAACTGTCTCTGAAAATCAATTGAATGAAAACATATATTATCATTGCACACTTTTTGACTTCTTGATTGGTAATGTTTGTTTTTGTTGGCTATAAATCTTCTAGCTATCTATTTTTGGCCATCCCAAAATCTGCATACTGTTTATCTATTTATACCTTAACTTACAGATATCAGTGTGATGGGCTTTGAAAAGTTGAATCATGTTTTGTCATAAAACACTTGGGTTCCAAAGCTTTCTCACCTTGTCAATTACCCATTTGATAGTGTTCTTGTACTCGTTCCTCTCTCCTTTCGATGTGATCGATGTGGGATCTCACCCCTTTCGATGTGATCGATGTGGGATCTCACCCCTTTCAATGTGATCGATGTGGGGTCTCACCCCTTACGATGTGATCGATGTGGGGTCTCACCCCTTACGATGTGATCGATGTGGGGTCTCACCCCTTACGATGTGATCGATGTGGGGTCTCACCGTATCTCACTGTTCTTGTTTTTTATTTCTTAATTCTTTTTCACATTTCTCATGTTTTTTTAAGGAACACGACTTGTCTATTTCTTGTTTTCAAAATCTTAGTAACCTTTTCTAGAAAAGGGAAAAATTTGAGAAACTACAATAATCAAAAGAACATATTGTTTGTACCAATATAGTTTTCCTTTCTCTATTGAATCTCTTTTGCTTTCTTATTGACTAAAGGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTTCTGAGCACCAGGCTTCATCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGGTAGAGTTGCATTTGAGCTGATGCTGCTCTGCCTATTTTTGCGCTCGCTCTCGTGTCCAAGTCTTTCGAATGCCAGTTACTAACATGCTTCATGATTGACCTCAAACTTTTGCAGCTAGCTTAATGGATACGGTGTATGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAGGACCATCTGATTGAGATTTGCCAATGCTGAAGCTGTATATTTCTGCTACTCCTCCTGCTGTCAATATATCCATAGACAAATTTGTTTTTATCATGTGAACATTATATATAATGCATATATCATACCTTCATATTTAAAATTATGTCCGAATTATAGACCCACTTTATCTCCGATGAACCCAAAACTTAGATTATAATGAAATCCTATGAAAAAGAACACAAGTGTAATTTCAAAGAAACATACAATAGCATCAACTTTGCAGTTTGTTGAAAGGCAAGCATTCCTGTGGAAACATGAACCTTATAGGAAGGGTTATTAAATACACTCAAGGTGAGGTCTAAACATCAGAAAAAATTTCATCATGCAACATATCATATTATCCACACTATGATATCAAAATGATTACTCAGAATATGAAGCCATATGAAGCATGCCACGTTACAGGCTGCTTTTATCACCAATCCAAAAATTTCGCCATCCTTTCGACCCATCTGGATGTATAAATCCTCCAGCCAGTTCGATCGCTCGCATTCTGTTGCTTCTATATCCACAAAATATTACATTTCACCGATCTGTGCTAGGAGAAAAGCCTCTGAGCACCGTTTCGCCACACACCCCGAACAGGCACTGCCCCAGCGGTATTGTTCCCATCCTCGACTCTTTCGGATGGGTCCGAGTCTGAAGCAGGGTTGGAGTTTTTTAAATCTAAGAGTGCAGCAACCGAACCATCGCCTAAACGAACTCTATGGAACTTGGAGGTCTTCTTTCTTTGCTTGCTCCCCCCACCATCTCCATCCCCTGTGCTTTGGTGGTTCGAGAGTCCAGTAGACGGTTGTCTGTTTTGTCCTCCTGTCCCACTTTGCTGGTCATCGGATGATATCTTCGTTTTGCCTTTCAAACCACGGTACTCACCCTTCGATAATACCTCAACATCTTCCTCCAATGGCCTGAGACTCGACTGCAGCTCCCGAACACTGCTCAAGATACTGTCTGCTAATCTGTCCTTTGAACTGTCCTTTGAACTGCTGTCTTTAACATCTGTAGACTTCCCTTTACCCTTCCTTCCCTTACCCTTGTCTTTAATTTGAATGCTATCTTGAGCCCTACCATTTTCTTGGATCACTTCTTTCTGTAAACTAGCATTATAGATCCCCACGAGTTCTTTCTGTTTCTGAGCATCAGGACACAGCCTAGCCAGTTCAAGCACAAGATGTGACAAACCGAACTGCTGCACACAGTCTAGGTACATTTCCGGGTCGATCTGACCTTGACGATATTGTGCAGATATATCTTTAAAAATGGCATATCTATCTTGGTCAAAATCAAGTGCAGCACGTATCTTTTCAACTAGAGATTTATTTGCTGTCTGGACATCTTCCGTGTTCATCGAACTCTGGCTACTTGAGGGCACCTTCCGTGATTGTGCCGCAGATACAGGAGGGAAATCATTAACCGAGGGTTCAGTATAAGCCATGTCGGTGAGATTGGGAGCGGAAGCAGAGTGGCTGATCCTACTGCTACTACTACCCGATCCACTCGAAGAACTAGTCTTACCCTTCGCATGCATTTGAGCAGCATTTGAGTAACCAGAGCCTGAAGAGCCATTACTGACGGTCACAACACCCTTAGTCTGCCCAGAACTGCTCGATGCCGTATGATTGACATTTATTGCAGGCCAAGCTTGAGATGATTTATTTGATGGTACCACAGGCGCACGACTTGATTTTGGCCAACCTTGGGCAGGATTTATTACAGTCACATTCCTCTTGCGGCGAAGATGAGCAGCCATACTGTTATTATCTTTGTCCTGAATGGGTTTTGGATGGCTACTGCTAGATGCTGTTGAAAGGGGTGGAAAGGATGATTGCCCCAATTGGGAATTCCTAGAATGACCCAATGCTTGAAGGTATCTAGAAGCTGATTCAGAATCTGTTGTGGATAATGATTCAAATGGTTCAATTAAGGGATCAATGTTGCTTATATTTCCCTGATCTGAGTCTACTTGTCCGCTAGGTAGTGGGTCATGAGTGGTGTCATCAACATTGGCTGTTTCAAAACTTTCTTGAATGGCTACAGAAAGTAGATCGTCAGAAGAATCACGACGAAATGTTCGTCTACCACGGCGATTATCTTGGTCATTACTTCTTCGATATCGAAAACTGGTTGGTATCTGAAAAGATTAATGCACAAAAGGGAAATACGATGTAAAAAAAAAAAAAACAATAAATTGACATACAAGAGACGAACTGGATTTCTTAAAGACCAGAATTGGGAGAGCAATATCATACCTGTAAAGCAGCATTTCGCTTTGATCGAGATAGCTTGCCACCATGTTCAATAGTATTATGCCTCTGAAAAATAGAAAATAGAAATGAAGAAACAATGCAATAAGATGGAGAAGGCCTAGAGCCTTAGACACTTGAAAGAAGTGGGCAAAAAAAAAAAAAAAAAAAAAAANGAAAGCATTTACTAAACACACACACACATACACACAAAACCTTCTTCAATGTTCTAAGTTACCTTCATTTCTGATTCAGATTGGAACACTATAAACTTCTTAGAAAGGCAGGTTTCATCTTCACAAAGAAAATGTGCTTGTCGGAAATGGATCTGTGGCCAAAAAGTTCGATGCATTACATTCAAAACACAAAACAGTGATTAAAAAGACAGTATTTCATAGTTAAACAACTTGCCTCCAGGTCATCATAATTCTTATAATATTCATACTGTCCAGGATGGAGCCTGCAACCCAAAAAAAAAA

mRNA sequence

TGAGCTATCCCCGCTTAGTTGTTGACTTATAAAATAAAACTTAAATAAGTGTTTCTATTATCTTTCTCTTTTTATTCATCTTCCGAGTTCTTTCATTTTGGACGGCATCGCAAAGAGATCGCTAATGGGAAAAACCAAATCCTTCAAAGATGAGTTCACCTACGAACAACGATTTGCGGAGTCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCTGTAATTGTTGAGAGATATGAGAAATGTGAACTTCCAGAGATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTTCTGAGCACCAGGCTTCATCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGGATACGGTGTATGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAGGACCATCTGATTGAGATTTGCCAATGCTGAAGCTGTATATTTCTGCTACTCCTCCTGCTGTCAATATATCCATAGACAAATTTGTTTTTATCATGTGAACATTATATATAATGCATATATCATACCTTCATATTTAAAATTATGTCCGAATTATAGACCCACTTTATCTCCGATGAACCCAAAACTTAGATTATAATGAAATCCTATGAAAAAGAACACAAGTGTAATTTCAAAGAAACATACAATAGCATCAACTTTGCAGTTTGTTGAAAGGCAAGCATTCCTGTGGAAACATGAACCTTATAGGAAGGGTTATTAAATACACTCAAGGTGAGGTCTAAACATCAGAAAAAATTTCATCATGCAACATATCATATTATCCACACTATGATATCAAAATGATTACTCAGAATATGAAGCCATATGAAGCATGCCACGTTACAGGCTGCTTTTATCACCAATCCAAAAATTTCGCCATCCTTTCGACCCATCTGGATGTATAAATCCTCCAGCCAGTTCGATCGCTCGCATTCTGTTGCTTCTATATCCACAAAATATTACATTTCACCGATCTGTGCTAGGAGAAAAGCCTCTGAGCACCGTTTCGCCACACACCCCGAACAGGCACTGCCCCAGCGGTATTGTTCCCATCCTCGACTCTTTCGGATGGGTCCGAGTCTGAAGCAGGGTTGGAGTTTTTTAAATCTAAGAGTGCAGCAACCGAACCATCGCCTAAACGAACTCTATGGAACTTGGAGGTCTTCTTTCTTTGCTTGCTCCCCCCACCATCTCCATCCCCTGTGCTTTGGTGGTTCGAGAGTCCAGTAGACGGTTGTCTGTTTTGTCCTCCTGTCCCACTTTGCTGGTCATCGGATGATATCTTCGTTTTGCCTTTCAAACCACGGTACTCACCCTTCGATAATACCTCAACATCTTCCTCCAATGGCCTGAGACTCGACTGCAGCTCCCGAACACTGCTCAAGATACTGTCTGCTAATCTGTCCTTTGAACTGTCCTTTGAACTGCTGTCTTTAACATCTGTAGACTTCCCTTTACCCTTCCTTCCCTTACCCTTGTCTTTAATTTGAATGCTATCTTGAGCCCTACCATTTTCTTGGATCACTTCTTTCTGTAAACTAGCATTATAGATCCCCACGAGTTCTTTCTGTTTCTGAGCATCAGGACACAGCCTAGCCAGTTCAAGCACAAGATGTGACAAACCGAACTGCTGCACACAGTCTAGGTACATTTCCGGGTCGATCTGACCTTGACGATATTGTGCAGATATATCTTTAAAAATGGCATATCTATCTTGGTCAAAATCAAGTGCAGCACGTATCTTTTCAACTAGAGATTTATTTGCTGTCTGGACATCTTCCGTGTTCATCGAACTCTGGCTACTTGAGGGCACCTTCCGTGATTGTGCCGCAGATACAGGAGGGAAATCATTAACCGAGGGTTCAGTATAAGCCATGTCGGTGAGATTGGGAGCGGAAGCAGAGTGGCTGATCCTACTGCTACTACTACCCGATCCACTCGAAGAACTAGTCTTACCCTTCGCATGCATTTGAGCAGCATTTGAGTAACCAGAGCCTGAAGAGCCATTACTGACGGTCACAACACCCTTAGTCTGCCCAGAACTGCTCGATGCCGTATGATTGACATTTATTGCAGGCCAAGCTTGAGATGATTTATTTGATGGTACCACAGGCGCACGACTTGATTTTGGCCAACCTTGGGCAGGATTTATTACAGTCACATTCCTCTTGCGGCGAAGATGAGCAGCCATACTGTTATTATCTTTGTCCTGAATGGGTTTTGGATGGCTACTGCTAGATGCTGTTGAAAGGGGTGGAAAGGATGATTGCCCCAATTGGGAATTCCTAGAATGACCCAATGCTTGAAGGTATCTAGAAGCTGATTCAGAATCTGTTGTGGATAATGATTCAAATGGTTCAATTAAGGGATCAATGTTGCTTATATTTCCCTGATCTGAGTCTACTTGTCCGCTAGGTAGTGGGTCATGAGTGGTGTCATCAACATTGGCTGTTTCAAAACTTTCTTGAATGGCTACAGAAAGTAGATCGTCAGAAGAATCACGACGAAATGTTCGTCTACCACGGCGATTATCTTGGTCATTACTTCTTCGATATCGAAAACTGGTTGGTATCTGAAAAGATTAATGCACAAAAGGGAAATACGATGTAAAAAAAAAAAAAACAATAAATTGACATACAAGAGACGAACTGGATTTCTTAAAGACCAGAATTGGGAGAGCAATATCATACCTGTAAAGCAGCATTTCGCTTTGATCGAGATAGCTTGCCACCATGTTCAATAGTATTATGCCTCTGAAAAATAGAAAATAGAAATGAAGAAACAATGCAATAAGATGGAGAAGGCCTAGAGCCTTAGACACTTGAAAGAAGTGGGCAAAAAAAAAAAAAAAAAAAAAAANGAAAGCATTTACTAAACACACACACACATACACACAAAACCTTCTTCAATGTTCTAAGTTACCTTCATTTCTGATTCAGATTGGAACACTATAAACTTCTTAGAAAGGCAGGTTTCATCTTCACAAAGAAAATGTGCTTGTCGGAAATGGATCTGTGGCCAAAAAGTTCGATGCATTACATTCAAAACACAAAACAGTGATTAAAAAGACAGTATTTCATAGTTAAACAACTTGCCTCCAGGTCATCATAATTCTTATAATATTCATACTGTCCAGGATGGAGCCTGCAACCCAAAAAAAAAA

Coding sequence (CDS)

ATGGGAAAAACCAAATCCTTCAAAGATGAGTTCACCTACGAACAACGATTTGCGGAGTCGTTCGAAATCTTGGCCAAGTATCCCGATCGAGTCCCTGTAATTGTTGAGAGATATGAGAAATGTGAACTTCCAGAGATGGAAAAGAAGAAGTACCTCATTCCTCGAGACATGTCTGTTGGCCAATTCATCCATGTTCTGAGCACCAGGCTTCATCTAGCACCTGGAAAAGCTCTCTTTGTATTTGTAAAGAATACTTTGCCTCAAACAGCTAGCTTAATGGATACGGTGTATGAATCATACAAGGACGACGATGGCTTTCTGTACATGTGTTACAGCAGTGAAAAGACCTTTGGCTAG

Protein sequence

MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG

Homology

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BLAST of Cp4.1LG12g06460 vs. ExPASy Swiss-Prot
Match: Q9LRP7 (Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 3.1e-46
Identity = 86/114 (75.44%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 5   KSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK+++T ++R AES EI+AKYP R+PVI E+Y K +LP +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS RLHL+PGKALFVFV NTLPQTA+LMD+VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy Swiss-Prot
Match: Q8S925 (Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 3.0e-41
Identity = 76/114 (66.67%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 5   KSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFKD+F+ ++R  ES  I+AKYPDR+PVI+E+Y   +LP+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS R+ L P KALFVFV NTLPQTAS MD++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy Swiss-Prot
Match: Q2RBS4 (Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D PE=3 SV=2)

HSP 1 Score: 165.2 bits (417), Expect = 4.4e-40
Identity = 79/117 (67.52%), Postives = 97/117 (82.91%), Query Frame = 0


Query: 3   KTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQF 62
           K + FK+EFT E+R  ES  ++A YPDR+PVIVE++ +  LPEMEK+KYL+P +M VGQF
Sbjct: 2   KPRPFKEEFTLEERAKESAAMIASYPDRIPVIVEKFSRSNLPEMEKRKYLVPCNMPVGQF 61

Query: 63  IHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDD-DGFLYMCYSSEKTFG 119
           I +L +RLHL+PG ALFVFV NTLPQTA LM +VYESYKD+ DGFLY+CYSSEKTFG
Sbjct: 62  IFILRSRLHLSPGTALFVFVNNTLPQTAQLMGSVYESYKDEGDGFLYLCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-33
Identity = 69/113 (61.06%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 6   SFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R AES  I  KY DR+PVIVE+ +K ++PE++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+P KA+FVFVKNTLP TASLM  +YE  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy Swiss-Prot
Match: Q69RC4 (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-33
Identity = 69/113 (61.06%), Postives = 88/113 (77.88%), Query Frame = 0


Query: 6   SFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R AES  I  KY DR+PVIVE+ +K ++PE++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+P KA+FVFVKNTLP TASLM  +YE  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cp4.1LG12g06460 vs. NCBI nr
Match: XP_022954168.1 (autophagy-related protein 8i-like [Cucurbita moschata] >XP_023547811.1 autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo] >KAG7014281.1 Autophagy-related protein 8i [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241 bits (615), Expect = 2.56e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. NCBI nr
Match: XP_022991717.1 (autophagy-related protein 8i-like [Cucurbita maxima])

HSP 1 Score: 239 bits (611), Expect = 1.04e-79
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFVKNTLPQT SLMDTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. NCBI nr
Match: KAG6575725.1 (Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239 bits (611), Expect = 1.04e-79
Identity = 117/118 (99.15%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLM+TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMETVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. NCBI nr
Match: XP_023514864.1 (autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 236 bits (601), Expect = 3.50e-78
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRL LAPGKALFVFVKNTLPQTASLM TVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVKNTLPQTASLMSTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. NCBI nr
Match: XP_038898685.1 (autophagy-related protein 8i-like [Benincasa hispida])

HSP 1 Score: 233 bits (595), Expect = 2.88e-77
Identity = 114/118 (96.61%), Postives = 114/118 (96.61%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRF ESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFEESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFVKNTLPQT SLM TVY SYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMSTVYNSYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy TrEMBL
Match: A0A6J1GQC4 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=1)

HSP 1 Score: 241 bits (615), Expect = 1.24e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy TrEMBL
Match: A0A6J1JMM5 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111488252 PE=3 SV=1)

HSP 1 Score: 239 bits (611), Expect = 5.06e-80
Identity = 117/118 (99.15%), Postives = 117/118 (99.15%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFVKNTLPQT SLMDTVYESYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTGSLMDTVYESYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy TrEMBL
Match: A0A5D3CGI6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00040 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 7.78e-75
Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MG+TKSFKDEFTYEQRF ESFE+LAKYPDRVPVIVERY KCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTYEQRFEESFEVLAKYPDRVPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRL LAPGKALFVFV NTLPQTASLM TVY+SYKDDDGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLRLAPGKALFVFVNNTLPQTASLMSTVYDSYKDDDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy TrEMBL
Match: A0A6J1CW54 (Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV=1)

HSP 1 Score: 226 bits (577), Expect = 7.78e-75
Identity = 109/118 (92.37%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MGK+KSFK+EFTYEQRF E+FEILAKYPDRVPVIVERY+KCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGKSKSFKNEFTYEQRFEEAFEILAKYPDRVPVIVERYDKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLS RLHLAPGKALFVFVKNTLPQTASLM +VYESYKDDDGFLYMCYS+EKTFG
Sbjct: 61  QFIHVLSNRLHLAPGKALFVFVKNTLPQTASLMSSVYESYKDDDGFLYMCYSTEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. ExPASy TrEMBL
Match: A0A0A0K6G3 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_7G419640 PE=3 SV=1)

HSP 1 Score: 225 bits (574), Expect = 2.23e-74
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MGKTKSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVG 60
           MG+TKSFKDEFT+EQRF ESFE+LAKYPDR+PVIVERY KCELPEMEKKKYLIPRDMSVG
Sbjct: 1   MGRTKSFKDEFTFEQRFGESFEVLAKYPDRIPVIVERYGKCELPEMEKKKYLIPRDMSVG 60

Query: 61  QFIHVLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 118
           QFIHVLSTRLHLAPGKALFVFV NTLPQTASLM TVY+SYKD DGFLYMCYSSEKTFG
Sbjct: 61  QFIHVLSTRLHLAPGKALFVFVNNTLPQTASLMSTVYDSYKDGDGFLYMCYSSEKTFG 118

[Close]

BLAST of Cp4.1LG12g06460 vs. TAIR 10
Match: AT3G15580.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 185.7 bits (470), Expect = 2.2e-47
Identity = 86/114 (75.44%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 5   KSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFK+++T ++R AES EI+AKYP R+PVI E+Y K +LP +EKKK+L+PRDMSVGQFI+
Sbjct: 2   KSFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIY 61

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS RLHL+PGKALFVFV NTLPQTA+LMD+VYESYKDDDGF+YMCYSSEKTFG
Sbjct: 62  ILSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115

[Close]

BLAST of Cp4.1LG12g06460 vs. TAIR 10
Match: AT3G06420.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 169.1 bits (427), Expect = 2.1e-42
Identity = 76/114 (66.67%), Postives = 97/114 (85.09%), Query Frame = 0


Query: 5   KSFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIH 64
           KSFKD+F+ ++R  ES  I+AKYPDR+PVI+E+Y   +LP+MEK KYL+PRDM+VG FIH
Sbjct: 6   KSFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIH 65

Query: 65  VLSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +LS R+ L P KALFVFV NTLPQTAS MD++Y ++K++DGFLYMCYS+EKTFG
Sbjct: 66  MLSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

[Close]

BLAST of Cp4.1LG12g06460 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 7.4e-35
Identity = 65/113 (57.52%), Postives = 89/113 (78.76%), Query Frame = 0


Query: 6   SFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R AE+  I  KYPDR+PVIVER EK ++P++++KKYL+P D++VGQF++V
Sbjct: 5   SFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+P KA+F+FVKN LP TA++M  +YE +KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Cp4.1LG12g06460 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-33
Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 6   SFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  I  KYPDR+PVIVER E+ ++P ++KKKYL+P D++VGQF++V
Sbjct: 5   SFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYV 64

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+  KA+FVFVKNTLP TA++M  +Y+  KD+DGFLYM YS E TFG
Sbjct: 65  VRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Cp4.1LG12g06460 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 138.3 bits (347), Expect = 4.1e-33
Identity = 65/113 (57.52%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 6   SFKDEFTYEQRFAESFEILAKYPDRVPVIVERYEKCELPEMEKKKYLIPRDMSVGQFIHV 65
           SFK E   E+R  ES  I  KYPDR+PVIVER E+ ++P ++KKKYL+P D++VGQF++V
Sbjct: 19  SFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYV 78

Query: 66  LSTRLHLAPGKALFVFVKNTLPQTASLMDTVYESYKDDDGFLYMCYSSEKTFG 119
           +  R+ L+  KA+FVFVKNTLP TA++M  +Y+  KD+DGFLYM YS E TFG
Sbjct: 79  VRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g06460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRP7	3.1e-46	75.44	Autophagy-related protein 8i OS=Arabidopsis thaliana OX=3702 GN=ATG8I PE=1 SV=1	[more]
Q8S925	3.0e-41	66.67	Autophagy-related protein 8h OS=Arabidopsis thaliana OX=3702 GN=ATG8H PE=1 SV=1	[more]
Q2RBS4	4.4e-40	67.52	Autophagy-related protein 8D OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8D P...	[more]
Q2XPP5	1.0e-33	61.06	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]
Q69RC4	1.0e-33	61.06	Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A P...	[more]

BLAST of Cp4.1LG12g06460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022954168.1	2.56e-80	100.00	autophagy-related protein 8i-like [Cucurbita moschata] >XP_023547811.1 autophagy...	[more]
XP_022991717.1	1.04e-79	99.15	autophagy-related protein 8i-like [Cucurbita maxima]	[more]
KAG6575725.1	1.04e-79	99.15	Autophagy-related protein 8i, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023514864.1	3.50e-78	98.31	autophagy-related protein 8i-like [Cucurbita pepo subsp. pepo]	[more]
XP_038898685.1	2.88e-77	96.61	autophagy-related protein 8i-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g06460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQC4	1.24e-80	100.00	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111456510 PE=3 SV=...	[more]
A0A6J1JMM5	5.06e-80	99.15	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111488252 PE=3 SV=1	[more]
A0A5D3CGI6	7.78e-75	93.22	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1CW54	7.78e-75	92.37	Autophagy-related protein OS=Momordica charantia OX=3673 GN=LOC111014838 PE=3 SV...	[more]
A0A0A0K6G3	2.23e-74	91.53	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_7G419640 PE=3 SV=1	[more]

BLAST of Cp4.1LG12g06460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15580.1	2.2e-47	75.44	Ubiquitin-like superfamily protein	[more]
AT3G06420.1	2.1e-42	66.67	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	7.4e-35	57.52	Ubiquitin-like superfamily protein	[more]
AT1G62040.1	4.1e-33	57.52	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	4.1e-33	57.52	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 1..118 e-value: 2.7E-50 score: 171.5
None	No IPR available	PANTHER	PTHR10969:SF81	AUTOPHAGY-RELATED PROTEIN	coord: 1..118
None	No IPR available	CDD	cd16108	Ubl_ATG8_like	coord: 29..113 e-value: 9.16784E-48 score: 146.184
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 15..118 e-value: 9.6E-44 score: 147.8
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..118
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g06460.1	Cp4.1LG12g06460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule