Cp4.1LG12g06200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

BLAST of Cp4.1LG12g06200 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 1068.1 bits (2761), Expect = 5.2e-311
Identity = 559/870 (64.25%), Postives = 671/870 (77.13%), Query Frame = 0

Query: 17  PSITVSVAMA----STPPHCSITTAKP----YQTHQYPHNNLKNHRRQNGSGTTTHAVSL 76
           PS + SV+ A    +TP    + T K      Q+ ++      NHR+   +    H    
Sbjct: 34  PSSSASVSSAHLSQTTPNFSPLQTPKSDFSGRQSTRFVSPATNNHRQTRQNPNYNH---- 93

Query: 77  VKP--LPPTPNHSAAKSASTSTSTP--LSQSPNFPSLRSLSTSKSELASNFSGRRSTRFV 136
            +P     +P  SA   +S +T  P  LSQ PNF  L+   T KS+L+S+FSGRRSTRFV
Sbjct: 94  -RPYGASSSPRGSAPPPSSVATVAPAQLSQPPNFSPLQ---TPKSDLSSDFSGRRSTRFV 153

Query: 137 SKFHVGRPKSSMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRE 196
           SK H GR K++MATRH++ AE+ L  A+ F  +D    +++L+FESKLCGS+D T+++RE
Sbjct: 154 SKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRE 213

Query: 197 LGNRGECWKAIRCFDFAVVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYG 256
           LGNR EC KA+  ++FAV RE RKNE+GKLASAMISTLGR GKV +AK +FETA + GYG
Sbjct: 214 LGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYG 273

Query: 257 NTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVE 316
           NTV+AFSALISAYG+SG  ++AI VF SMK+ GL+PNLVTYNAVIDACGKG +EF +V +
Sbjct: 274 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 333

Query: 317 IFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVC 376
            F+EM RNGVQPDRIT+NS LAVCSRGGLWEAAR+LF EM +R I+QD+F+YNTLLDA+C
Sbjct: 334 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 393

Query: 377 KGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRV 436
           KGGQMDLA EI+ +MP K+I PNVV+YST+ DG+AKAGR ++ALNL+ EM+ LGI LDRV
Sbjct: 394 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 453

Query: 437 SYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEM 496
           SYNTL+SIY K+GR E+AL++ REM S G+KKDVVTYNALL GYGKQGK+ EV +VF EM
Sbjct: 454 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 513

Query: 497 KRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLV 556
           KR+ V PNLLTYSTLID YSKG LY+EAME+FREFK AGL+ADVVLYS LI+ALCKNGLV
Sbjct: 514 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 573

Query: 557 DSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDE 616
            SAVSL+DEM KEGI PNVVTYNSIIDAFGRS T +      S   S   SL        
Sbjct: 574 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD-----RSADYSNGGSLPFSSSALS 633

Query: 617 RETENWDDDHAFKFYQQLVSEKEGPAKKE-RLGKEEIGSILNVFKKMHELQIKPNVVTFS 676
             TE  + +   + + QL +E      K+   G +E+  IL VF+KMH+L+IKPNVVTFS
Sbjct: 634 ALTET-EGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFS 693

Query: 677 AILNACSRCKSIEEASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDS 736
           AILNACSRC S E+ASMLLEELRLFDN+VYGV HGLLMG  ENVW+QAQ LFD+V  MD 
Sbjct: 694 AILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDG 753

Query: 737 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVH 796
           STASAFYNALTDMLWHFGQKRGA+LV LEG+ R VWE +WSDSCLDLHLMSSGAARAMVH
Sbjct: 754 STASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVH 813

Query: 797 AWLLGIHSVVFNGHQLPKLLSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNI 856
           AWLL I S+V+ GH+LPK+LSILTGWGKHSKVVGDGALRRA++ LL  M APF ++KCN+
Sbjct: 814 AWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNM 873

Query: 857 GRYVSTGSVVAAWLKESGTLKLLVLHDDRT 874
           GR+ S+GSVVA WL+ES TLKLL+LHD  T
Sbjct: 874 GRFTSSGSVVATWLRESATLKLLILHDHIT 889

BLAST of Cp4.1LG12g06200 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.8e-76
Identity = 206/808 (25.50%), Postives = 396/808 (49.01%), Query Frame = 0

Query: 101 LRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIAEEVLHQALQFGKNDAS 160
           LR LS    +  S FSG+   +      +G P  S+     +   E L   L       S
Sbjct: 34  LRFLSGGNRKPCS-FSGKIKAK-TKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGS 93

Query: 161 LDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVREGRKNERGKLASAMIS 220
           +   L  F++KL    D+  + +E   RG+  +++R F + + R+        + + MIS
Sbjct: 94  IARCLDIFKNKL-SLNDFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMIS 153

Query: 221 TLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKP 280
            LGR G ++    VF+   S+G   +VF+++ALI+AYG++G ++ ++++ + MK+  + P
Sbjct: 154 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 213

Query: 281 NLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSL 340
           +++TYN VI+AC +G +++  ++ +F EM   G+QPD +TYN+ L+ C+  GL + A  +
Sbjct: 214 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 273

Query: 341 FSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAK 400
           F  M D GI  D+ TY+ L++   K  +++   +++ EM S    P++ +Y+ + + YAK
Sbjct: 274 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 333

Query: 401 AGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVT 460
           +G +++A+ ++++M+  G   +  +Y+ L++++ + GR++D   +  EM SS    D  T
Sbjct: 334 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 393

Query: 461 YNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 520
           YN L++ +G+ G F EV  +F +M  + + P++ TY  +I    KG L+E+A ++ +   
Sbjct: 394 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 453

Query: 521 RAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAE 580
              +      Y+ +I A  +  L + A+   + M + G  P++ T++S++ +F R    +
Sbjct: 454 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 513

Query: 581 S-------LVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKE 640
                   LV +   R  ++ +  +     E   +    + A K Y  +   +  P ++ 
Sbjct: 514 ESEAILSRLVDSGIPRNRDTFNAQI-----EAYKQGGKFEEAVKTYVDMEKSRCDPDERT 573

Query: 641 RLGKEEIGSILNV-------FKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE-L 700
                 + S   +       F++M    I P+++ +  +L    + +  ++ + LLEE L
Sbjct: 574 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 633

Query: 701 RLFDNQVYGVAHGLLMG--FSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQK 760
               + ++ V   ++ G    ++ W   +Y+ D++          FYNAL D LW  GQK
Sbjct: 634 SNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQK 693

Query: 761 RGAQLVVLEGKRRNVWETLWSDSCL----DLHLMSSGAARAMVHAWLLGIHSVVFNGHQL 820
             A  V+ E  +R ++  L+  + L    D+H MS G     +  WL  I+ ++  G  L
Sbjct: 694 ERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DL 753

Query: 821 PKLLSILTGWG---KHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAW 880
           P+L  +++  G   K S        + A   L   + + F     N GR +         
Sbjct: 754 PQLAVVVSVRGQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMC-------- 813

Query: 881 LKESGTLKLLVLHDDRTHPDSENVDLIS 885
             +   LK L+   + T  +SEN +L++
Sbjct: 814 --QRSQLKQLLSTKEPTSEESENKNLVA 821

BLAST of Cp4.1LG12g06200 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 1.4e-69
Identity = 188/684 (27.49%), Postives = 339/684 (49.56%), Query Frame = 0

Query: 70  KPLPPTPNHSAAKSASTSTSTPLSQSPNFP--------SLRSLSTSKSELASNFSGRRST 129
           KP     NH  +++   +TS  LS  P  P         L     S+  ++S  S  R+ 
Sbjct: 18  KPYSHDQNHHISRTPFLTTS--LSSPPPPPVEPLLHDVFLHQNPNSRQPISSQTSRNRNR 77

Query: 130 RFVSKF---HVGRPKS--SMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESK-LCGS 189
             + K    ++G+P S   ++ +   +   ++      G+ D+ L  +   F+ K    S
Sbjct: 78  TRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTS 137

Query: 190 EDYTFLLRELGNRGECWKAIRCFD-FAVVREGRKNERGKLASAMISTLGRLGKVELAKGV 249
            +    L+ LG   +   A+R FD F   ++ +      + + +IS LG+ G+V  A  +
Sbjct: 138 SELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 197

Query: 250 FETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGK 309
           F     +G+   V+++++LISA+  SG + +A+ VF+ M++ G KP L+TYN +++  GK
Sbjct: 198 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 257

Query: 310 GVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIF 369
               + ++  + E+M  +G+ PD  TYN+ +  C RG L + A  +F EM   G   D  
Sbjct: 258 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 317

Query: 370 TYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEM 429
           TYN LLD   K  +   A +++ EM     SP++VTY+++   YA+ G L++A+ L N+M
Sbjct: 318 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 377

Query: 430 KLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKF 489
              G   D  +Y TL+S + + G+ E A+++  EM ++G K ++ T+NA +  YG +GKF
Sbjct: 378 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 437

Query: 490 TEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSEL 549
           TE+ ++F E+    + P+++T++TL+ V+ +  +  E   VF+E KRAG   +   ++ L
Sbjct: 438 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 497

Query: 550 INALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESP 609
           I+A  + G  + A+++   M+  G+ P++ TYN+++ A  R    E         QSE  
Sbjct: 498 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE---------QSEK- 557

Query: 610 SLMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQ 669
             +L E  D R   N        +   L +   G         +EIG + ++ ++++   
Sbjct: 558 --VLAEMEDGRCKPN-----ELTYCSLLHAYANG---------KEIGLMHSLAEEVYSGV 617

Query: 670 IKPNVVTFSAILNACSRCKSIEEASMLLEEL--RLFDNQVYGVAHGLLMGFSENVWIQAQ 729
           I+P  V    ++  CS+C  + EA     EL  R F   +  +   + +     +  +A 
Sbjct: 618 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 673

Query: 730 YLFDEVKRMDSSTASAFYNALTDM 737
            + D +K    + + A YN+L  M
Sbjct: 678 GVLDYMKERGFTPSMATYNSLMYM 673

BLAST of Cp4.1LG12g06200 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 3.3e-55
Identity = 152/546 (27.84%), Postives = 271/546 (49.63%), Query Frame = 0

Query: 160 SLDNILLNFESKLCGSEDYTFLL--------RELGNRGECWKAIRCFDFAVVREGRKNER 219
           SLD+   N     CGS D  F L        R+L    E +  +R   F V  +      
Sbjct: 153 SLDSTFSN-----CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA----- 212

Query: 220 GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFE 279
               +A+I +L R+G VELA GV++     G G  V+  + +++A  K G  ++      
Sbjct: 213 ---CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 272

Query: 280 SMKDSGLKPNLVTYNAVIDA-CGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSR 339
            +++ G+ P++VTYN +I A   KG++E     E+   M   G  P   TYN+ +    +
Sbjct: 273 QVQEKGVYPDIVTYNTLISAYSSKGLME--EAFELMNAMPGKGFSPGVYTYNTVINGLCK 332

Query: 340 GGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVT 399
            G +E A+ +F+EM   G+  D  TY +LL   CK G +    ++  +M S+ + P++V 
Sbjct: 333 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 392

Query: 400 YSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMG 459
           +S+M   + ++G L+ AL  +N +K  G+  D V Y  L+  Y + G    A+N+  EM 
Sbjct: 393 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 452

Query: 460 SSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYE 519
             G   DVVTYN +L G  K+    E  ++F EM    ++P+  T + LID + K    +
Sbjct: 453 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 512

Query: 520 EAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSII 579
            AME+F++ K   ++ DVV Y+ L++   K G +D+A  +  +M+ + I P  ++Y+ ++
Sbjct: 513 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 572

Query: 580 DAF-GRSTTAESL-VGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVSEKEG 639
           +A   +   AE+  V      ++  P++M+   + +    + +      F ++++SE   
Sbjct: 573 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 632

Query: 640 PAKKER-------LGKEEIGSILNVFKKMHELQ--IKPNVVTFSAILNACSRCKSIEEAS 686
           P            + +E +     + KKM E Q  + P+V T+++IL+   R   ++EA 
Sbjct: 633 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 683

BLAST of Cp4.1LG12g06200 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 2.8e-54
Identity = 139/527 (26.38%), Postives = 255/527 (48.39%), Query Frame = 0

Query: 216 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKD 275
           S   S + R  +  L     +     G  + ++  + +I+ + +      A  V   +  
Sbjct: 92  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 276 SGLKPNLVTYNAVIDACGKGVVEFGRVVE---IFEEMLRNGVQPDRITYNSFLAVCSRGG 335
            G +P+  T+N +I    KG+   G+V E   + + M+ NG QPD +TYNS +    R G
Sbjct: 152 LGYEPDTTTFNTLI----KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 211

Query: 336 LWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYS 395
               A  L  +M +R +  D+FTY+T++D++C+ G +D A  +  EM +K I  +VVTY+
Sbjct: 212 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 271

Query: 396 TMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSS 455
           ++  G  KAG+  D   L  +M    I  + +++N L+ ++ K G+ ++A  + +EM + 
Sbjct: 272 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 331

Query: 456 GVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEA 515
           G+  +++TYN L+DGY  Q + +E   +   M R++  P+++T+++LI  Y      ++ 
Sbjct: 332 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 391

Query: 516 MEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDA 575
           M+VFR   + GL A+ V YS L+   C++G +  A  L  EM+  G+ P+V+TY  ++D 
Sbjct: 392 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 451

Query: 576 FGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKK 635
              +   E  +    D Q     L ++                   Y  ++   EG  K 
Sbjct: 452 LCDNGKLEKALEIFEDLQKSKMDLGIV------------------MYTTII---EGMCKG 511

Query: 636 ERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEELRLFDNQV 695
              GK E     N+F  +    +KPNV+T++ +++   +  S+ EA++LL ++    N  
Sbjct: 512 ---GKVE--DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 571

Query: 696 YGVAHGLLM--GFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDML 738
               +  L+     +     +  L +E+K    S  ++    + DML
Sbjct: 572 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588

BLAST of Cp4.1LG12g06200 vs. NCBI nr
Match: XP_023547932.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1697 bits (4396), Expect = 0.0
Identity = 867/867 (100.00%), Postives = 867/867 (100.00%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 84
           MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60

Query: 85  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 144
           STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 120

Query: 145 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR 204
           EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR 180

Query: 205 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 264
           EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240

Query: 265 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 324
           QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300

Query: 325 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 384
           LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360

Query: 385 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 444
           SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420

Query: 445 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 504
           VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480

Query: 505 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 564
           KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540

Query: 565 TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS 624
           TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS 600

Query: 625 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE 684
           EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE 660

Query: 685 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 744
           LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720

Query: 745 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 804
           GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 780

Query: 805 ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK 864
           ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK
Sbjct: 781 ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK 840

Query: 865 LLVLHDDRTHPDSENVDLISKLQMVSL 891
           LLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 LLVLHDDRTHPDSENVDLISKLQMVSL 867

BLAST of Cp4.1LG12g06200 vs. NCBI nr
Match: XP_022953240.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita moschata] >XP_022953241.1 pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita moschata] >KAG6575757.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1694 bits (4388), Expect = 0.0
Identity = 864/867 (99.65%), Postives = 867/867 (100.00%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 84
           MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60

Query: 85  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 144
           STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 120

Query: 145 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR 204
           EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA+VR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180

Query: 205 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 264
           EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240

Query: 265 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 324
           QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300

Query: 325 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 384
           LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360

Query: 385 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 444
           SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420

Query: 445 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 504
           VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480

Query: 505 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 564
           KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540

Query: 565 TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS 624
           TYNSIIDAFGRSTTAESLVGASSDRQSESPS+MLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600

Query: 625 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE 684
           EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIE+ASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660

Query: 685 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 744
           LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720

Query: 745 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 804
           GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 780

Query: 805 ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK 864
           ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK
Sbjct: 781 ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK 840

Query: 865 LLVLHDDRTHPDSENVDLISKLQMVSL 891
           LLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 LLVLHDDRTHPDSENVDLISKLQMVSL 867

BLAST of Cp4.1LG12g06200 vs. NCBI nr
Match: XP_022991277.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 1682 bits (4357), Expect = 0.0
Identity = 861/869 (99.08%), Postives = 864/869 (99.42%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 84
           MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60

Query: 85  STSTST--PLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA 144
           STSTST  PLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA
Sbjct: 61  STSTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA 120

Query: 145 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAV 204
           IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA+
Sbjct: 121 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 180

Query: 205 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 264
           VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY
Sbjct: 181 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 240

Query: 265 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 324
           FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN
Sbjct: 241 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 300

Query: 325 SFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 384
           SFLAVCSRGGLWEAARSLFSEM DRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK
Sbjct: 301 SFLAVCSRGGLWEAARSLFSEMTDRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 360

Query: 385 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 444
           KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA
Sbjct: 361 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 420

Query: 445 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 504
           LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV
Sbjct: 421 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 480

Query: 505 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 564
           YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN
Sbjct: 481 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 540

Query: 565 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQL 624
           VVTYNSIIDAFGRSTTAESLVGASSDRQSESPS MLIEGVDERETENWDDDHAFKFYQQL
Sbjct: 541 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSFMLIEGVDERETENWDDDHAFKFYQQL 600

Query: 625 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLL 684
           VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIE+ASMLL
Sbjct: 601 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL 660

Query: 685 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 744
           EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ
Sbjct: 661 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 720

Query: 745 KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL 804
           KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL
Sbjct: 721 KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL 780

Query: 805 LSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGT 864
           LSILTGWGKHSKVVGDGALRRAIKALLASMGAPF VAKCNIGRYVSTGSVVAAWLKESGT
Sbjct: 781 LSILTGWGKHSKVVGDGALRRAIKALLASMGAPFWVAKCNIGRYVSTGSVVAAWLKESGT 840

Query: 865 LKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           LKLLVLHDDRTHPDSENVDLIS+LQMVSL
Sbjct: 841 LKLLVLHDDRTHPDSENVDLISELQMVSL 869

BLAST of Cp4.1LG12g06200 vs. NCBI nr
Match: KAG7014307.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1677 bits (4343), Expect = 0.0
Identity = 858/871 (98.51%), Postives = 864/871 (99.20%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 84
           MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHA+SLVKPLPPTPNHSA KSA
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHALSLVKPLPPTPNHSAPKSA 60

Query: 85  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 144
           STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGR STRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRCSTRFVSKFHVGRPKSSMATRHTAIA 120

Query: 145 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR 204
           EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA+VR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180

Query: 205 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 264
           EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240

Query: 265 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 324
           QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300

Query: 325 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 384
           LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360

Query: 385 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 444
           SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420

Query: 445 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 504
           VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480

Query: 505 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 564
           KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540

Query: 565 TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS 624
           TYNSIIDAFGRSTTAESLVGASSDRQSESPS+MLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600

Query: 625 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE 684
           EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIE+ASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660

Query: 685 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 744
           LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720

Query: 745 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 804
           GAQLVVLEGK+RNVWETLWSDSCLDLHLMSSGAA AMVHAWLLGIHSVVFNGHQLPKLLS
Sbjct: 721 GAQLVVLEGKKRNVWETLWSDSCLDLHLMSSGAACAMVHAWLLGIHSVVFNGHQLPKLLS 780

Query: 805 ----ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKES 864
               ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK+S
Sbjct: 781 HRASILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKDS 840

Query: 865 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           GTLKLLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 GTLKLLVLHDDRTHPDSENVDLISKLQMVSL 871

BLAST of Cp4.1LG12g06200 vs. NCBI nr
Match: XP_038897325.1 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic [Benincasa hispida])

HSP 1 Score: 1584 bits (4101), Expect = 0.0
Identity = 813/873 (93.13%), Postives = 834/873 (95.53%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHAVSLVKPLPPTPNHSAA 84
           MASTPPHCSITTAKPYQ HQYP NNLKNHR   RQNGS TTTH VSLVKPLP TP HSA 
Sbjct: 1   MASTPPHCSITTAKPYQNHQYPQNNLKNHRQNPRQNGSWTTTHKVSLVKPLPSTPGHSAT 60

Query: 85  KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHT 144
           KS STSTSTPLSQSPNFPSL SL TSKSELASNFSGRRSTRFVSKFH GRPKSSMATRHT
Sbjct: 61  KSTSTSTSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMATRHT 120

Query: 145 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 204
           AIAEEVLHQALQFGK+D SLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCF+FA
Sbjct: 121 AIAEEVLHQALQFGKDDVSLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFEFA 180

Query: 205 VVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 264
           +VREG+KNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LVREGKKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240

Query: 265 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 324
           YFDQAIKVFESMK SGLKPNLVTYNAVIDACGKG VEF RVVEIFEEMLRNGVQPDRITY
Sbjct: 241 YFDQAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300

Query: 325 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 384
           NS LAVCSRGGLWEAAR+LF+EM DRGIDQD+FTYNTLLDAVCKGGQMDLA+EIMLEMP 
Sbjct: 301 NSLLAVCSRGGLWEAARNLFNEMVDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360

Query: 385 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 444
           KKI PNVVTYSTMADGYAKAGRLEDAL+LYNEMK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALSLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420

Query: 445 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 504
           ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKF EVTRVFKEMK+DRV+PNLLTYSTLID
Sbjct: 421 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480

Query: 505 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 564
           VYSKGSLYEEAMEVFREFK+AGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540

Query: 565 NVVTYNSIIDAFGRSTTAES---LVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKF 624
           NVVTYNSIIDAFGRSTTAES    VGASS+RQSESPS MLIE VDE E +NWD DH FKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAESPVDSVGASSERQSESPSFMLIESVDESEIDNWDHDHIFKF 600

Query: 625 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEA 684
           YQQLVSEKEG  KKERLGKEEI SIL+VFKKMHELQIKPNVVTFSAILNACSRCKSIE+A
Sbjct: 601 YQQLVSEKEGATKKERLGKEEIRSILSVFKKMHELQIKPNVVTFSAILNACSRCKSIEDA 660

Query: 685 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 744
           SMLLEELRLFDNQVYGVAHGLLMGF+ENVWIQAQYLFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFNENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720

Query: 745 HFGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 804
           HFGQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780

Query: 805 LPKLLSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK 864
           LPKLLSILTGWGKHSKVVGDGALRRAI+ALL SMGAPFRVAKCNIGRYVSTGSVVAAWLK
Sbjct: 781 LPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLK 840

Query: 865 ESGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           ESGTLKLLVLHDDRTHPDSENVDLISKLQM+SL
Sbjct: 841 ESGTLKLLVLHDDRTHPDSENVDLISKLQMISL 873

BLAST of Cp4.1LG12g06200 vs. ExPASy TrEMBL
Match: A0A6J1GMF8 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111455846 PE=3 SV=1)

HSP 1 Score: 1694 bits (4388), Expect = 0.0
Identity = 864/867 (99.65%), Postives = 867/867 (100.00%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 84
           MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60

Query: 85  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 144
           STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA
Sbjct: 61  STSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIA 120

Query: 145 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVR 204
           EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA+VR
Sbjct: 121 EEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFALVR 180

Query: 205 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 264
           EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD
Sbjct: 181 EGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFD 240

Query: 265 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 324
           QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF
Sbjct: 241 QAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSF 300

Query: 325 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 384
           LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI
Sbjct: 301 LAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKI 360

Query: 385 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 444
           SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN
Sbjct: 361 SPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALN 420

Query: 445 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 504
           VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS
Sbjct: 421 VCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYS 480

Query: 505 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 564
           KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV
Sbjct: 481 KGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVV 540

Query: 565 TYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVS 624
           TYNSIIDAFGRSTTAESLVGASSDRQSESPS+MLIEGVDERETENWDDDHAFKFYQQLVS
Sbjct: 541 TYNSIIDAFGRSTTAESLVGASSDRQSESPSIMLIEGVDERETENWDDDHAFKFYQQLVS 600

Query: 625 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE 684
           EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIE+ASMLLEE
Sbjct: 601 EKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLLEE 660

Query: 685 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 744
           LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR
Sbjct: 661 LRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQKR 720

Query: 745 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 804
           GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS
Sbjct: 721 GAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKLLS 780

Query: 805 ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK 864
           ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK
Sbjct: 781 ILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGTLK 840

Query: 865 LLVLHDDRTHPDSENVDLISKLQMVSL 891
           LLVLHDDRTHPDSENVDLISKLQMVSL
Sbjct: 841 LLVLHDDRTHPDSENVDLISKLQMVSL 867

BLAST of Cp4.1LG12g06200 vs. ExPASy TrEMBL
Match: A0A6J1JLC8 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111487979 PE=3 SV=1)

HSP 1 Score: 1682 bits (4357), Expect = 0.0
Identity = 861/869 (99.08%), Postives = 864/869 (99.42%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 84
           MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPHNNLKNHRRQNGSGTTTHAVSLVKPLPPTPNHSAAKSA 60

Query: 85  STSTST--PLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA 144
           STSTST  PLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA
Sbjct: 61  STSTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTA 120

Query: 145 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAV 204
           IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA+
Sbjct: 121 IAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAL 180

Query: 205 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 264
           VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY
Sbjct: 181 VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGY 240

Query: 265 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 324
           FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN
Sbjct: 241 FDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYN 300

Query: 325 SFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 384
           SFLAVCSRGGLWEAARSLFSEM DRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK
Sbjct: 301 SFLAVCSRGGLWEAARSLFSEMTDRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSK 360

Query: 385 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 444
           KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA
Sbjct: 361 KISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDA 420

Query: 445 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 504
           LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV
Sbjct: 421 LNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDV 480

Query: 505 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 564
           YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN
Sbjct: 481 YSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPN 540

Query: 565 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQL 624
           VVTYNSIIDAFGRSTTAESLVGASSDRQSESPS MLIEGVDERETENWDDDHAFKFYQQL
Sbjct: 541 VVTYNSIIDAFGRSTTAESLVGASSDRQSESPSFMLIEGVDERETENWDDDHAFKFYQQL 600

Query: 625 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLL 684
           VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIE+ASMLL
Sbjct: 601 VSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEDASMLL 660

Query: 685 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 744
           EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ
Sbjct: 661 EELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQ 720

Query: 745 KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL 804
           KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL
Sbjct: 721 KRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQLPKL 780

Query: 805 LSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLKESGT 864
           LSILTGWGKHSKVVGDGALRRAIKALLASMGAPF VAKCNIGRYVSTGSVVAAWLKESGT
Sbjct: 781 LSILTGWGKHSKVVGDGALRRAIKALLASMGAPFWVAKCNIGRYVSTGSVVAAWLKESGT 840

Query: 865 LKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           LKLLVLHDDRTHPDSENVDLIS+LQMVSL
Sbjct: 841 LKLLVLHDDRTHPDSENVDLISELQMVSL 869

BLAST of Cp4.1LG12g06200 vs. ExPASy TrEMBL
Match: A0A0A0KB90 (Pentatricopeptide repeat-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G407790 PE=3 SV=1)

HSP 1 Score: 1556 bits (4029), Expect = 0.0
Identity = 802/873 (91.87%), Postives = 824/873 (94.39%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHAVSLVKPLPPTPNHSAA 84
           MASTPPHCSIT AKPYQTHQYP NNLKNHR   RQNG  TTTH   LVKPLP TP HSA 
Sbjct: 1   MASTPPHCSITAAKPYQTHQYPQNNLKNHRQNARQNGPWTTTHKFPLVKPLPSTPGHSAT 60

Query: 85  KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHT 144
           KS    TSTPLSQSPNFPSL SL TSKSELASNFSGRRSTRFVSKFH GRPKSSM TRH+
Sbjct: 61  KS----TSTPLSQSPNFPSLCSLPTSKSELASNFSGRRSTRFVSKFHFGRPKSSMTTRHS 120

Query: 145 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 204
           AIAEEVLHQ LQFGK+DASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA
Sbjct: 121 AIAEEVLHQVLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180

Query: 205 VVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 264
           +VREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240

Query: 265 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 324
           YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKG VEF RVVEIFEEMLRNGVQPDRITY
Sbjct: 241 YFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300

Query: 325 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 384
           NS LAVCSRGGLWEAAR+LF+EM DRGIDQD+FTYNTLLDAVCKGGQMDLA+EIMLEMP 
Sbjct: 301 NSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360

Query: 385 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 444
           KKI PNVVTYSTMADGYAKAGRLEDALNLYNEMK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420

Query: 445 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 504
           AL VC+EMGSSGVKKDVVTYNALLDGYGKQGKF EVTRVFKEMK+DRV+PNLLTYSTLID
Sbjct: 421 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480

Query: 505 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 564
           VYSKGSLYEEAMEVFREFK+AGLKADVVLYSELINALCKNGLVDSAV LLDEM KEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 540

Query: 565 NVVTYNSIIDAFGRSTTAESLV---GASSDRQSESPSLMLIEGVDERETENWDDDHAFKF 624
           NVVTYNSIIDAFGRSTTAE LV   GAS++RQSESPS MLIEGVDE E  NWDD H FKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAEFLVDGVGASNERQSESPSFMLIEGVDESEI-NWDDGHVFKF 600

Query: 625 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEA 684
           YQQLVSEKEGPAKKERLGKEEI SIL+VFKKMHEL+IKPNVVTFSAILNACSRCKSIE+A
Sbjct: 601 YQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660

Query: 685 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 744
           SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720

Query: 745 HFGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 804
           HFGQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVF GHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFEGHQ 780

Query: 805 LPKLLSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK 864
           LPKLLSILTGWGKHSKVVGDGALRRAI+ALL SMGAPFRVAKCNIGRYVSTGSVVAAWLK
Sbjct: 781 LPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLK 840

Query: 865 ESGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           ESGTLKLLVLHDDRTHPDSEN+DLISKLQ +SL
Sbjct: 841 ESGTLKLLVLHDDRTHPDSENMDLISKLQTISL 868

BLAST of Cp4.1LG12g06200 vs. ExPASy TrEMBL
Match: A0A1S3BSC2 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103492746 PE=3 SV=1)

HSP 1 Score: 1555 bits (4026), Expect = 0.0
Identity = 801/873 (91.75%), Postives = 827/873 (94.73%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHAVSLVKPLPPTPNHSAA 84
           MASTPPHCSITTAKPYQTHQYP NNLKNHR   RQNG  TTTH  SLVKP   TP HSA 
Sbjct: 1   MASTPPHCSITTAKPYQTHQYPQNNLKNHRQNPRQNGPWTTTHKFSLVKPS--TPGHSAK 60

Query: 85  KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHT 144
           KS    TSTPLSQSPNF SL SL TSKSELASNFSG RSTRFVSKFH GRPKSSMATRHT
Sbjct: 61  KS----TSTPLSQSPNFHSLCSLPTSKSELASNFSGHRSTRFVSKFHFGRPKSSMATRHT 120

Query: 145 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 204
           AIAEEVLHQ LQFGK+DASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA
Sbjct: 121 AIAEEVLHQLLQFGKDDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 180

Query: 205 VVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 264
           +VREGRKNE+GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LVREGRKNEKGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240

Query: 265 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 324
           YFD+AIKVFESMK SGLKPNLVTYNAVIDACGKG VEF RVVEIFEEMLRNGVQPDRITY
Sbjct: 241 YFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITY 300

Query: 325 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 384
           NS LAVCSRGGLWEAA++LF+EM DRGIDQD+FTYNTLLDAVCKGGQMDLA+EIMLEMP 
Sbjct: 301 NSLLAVCSRGGLWEAAQNLFNEMVDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPG 360

Query: 385 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 444
           KKI PNVVTYSTMADGYAKAGRLEDALNLYN+MK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNDMKFLGIGLDRVSYNTLLSIYAKLGRFED 420

Query: 445 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 504
           AL VC+EMGSSGVKKDVVTYNALLDGYGKQGKF EVTRVFKEMK+DRV+PNLLTYSTLID
Sbjct: 421 ALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLID 480

Query: 505 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 564
           VYSKGSLYEEAMEVFREFK+AGLKADVVLYSELINALCKNGLVDSAV LLDEM KEGIRP
Sbjct: 481 VYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRP 540

Query: 565 NVVTYNSIIDAFGRSTTAESLV---GASSDRQSESPSLMLIEGVDERETENWDDDHAFKF 624
           NVVTYNSIIDAFGRSTTAESLV   GAS++RQSESPS MLIEGVDE E +NWDDDH FKF
Sbjct: 541 NVVTYNSIIDAFGRSTTAESLVDVVGASNERQSESPSFMLIEGVDESEIDNWDDDHVFKF 600

Query: 625 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEA 684
           YQQLVSEKEGPAKKERLGKEEI SIL+VFKKMHEL+IKPNVVTFSAILNACSRCKSIE+A
Sbjct: 601 YQQLVSEKEGPAKKERLGKEEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660

Query: 685 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 744
           SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKQMDSSTASAFYNALTDMLW 720

Query: 745 HFGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 804
           HFGQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780

Query: 805 LPKLLSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK 864
           LPKLLSILTGWGKHSKVVGDGALRRAI+ALL SMGAPFRVAKCNIGRYVSTGSVVAAWLK
Sbjct: 781 LPKLLSILTGWGKHSKVVGDGALRRAIEALLTSMGAPFRVAKCNIGRYVSTGSVVAAWLK 840

Query: 865 ESGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           ESGTLKLLVLHDDRTHPDSE++DLISKLQ +SL
Sbjct: 841 ESGTLKLLVLHDDRTHPDSESMDLISKLQTISL 867

BLAST of Cp4.1LG12g06200 vs. ExPASy TrEMBL
Match: A0A6J1D2T9 (pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111016779 PE=3 SV=1)

HSP 1 Score: 1545 bits (3999), Expect = 0.0
Identity = 792/873 (90.72%), Postives = 824/873 (94.39%), Query Frame = 0

Query: 25  MASTPPHCSITTAKPYQTHQYPHNNLKNHR---RQNGSGTTTHAVSLVKPLPPTPNHSAA 84
           MASTPPHCSITTAK YQTHQYP NNLKNHR   RQNGS TT   VSLVKPLP +P  +A 
Sbjct: 1   MASTPPHCSITTAKAYQTHQYPQNNLKNHRQNPRQNGSWTTQ-KVSLVKPLPASPAQNAT 60

Query: 85  KSASTSTSTPLSQSPNFPSLRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHT 144
           KS+++ST TP+SQ+PNFPSL SL  SKSELASNFSGRRSTRFVSKFH GRPKSSMATRHT
Sbjct: 61  KSSTSSTPTPISQNPNFPSLCSLPASKSELASNFSGRRSTRFVSKFHFGRPKSSMATRHT 120

Query: 145 AIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFA 204
            IAEEVLHQALQFGK+D SLDN+LLNFESKLCGSEDYTFLLRELGNRGECWKAIRCF+FA
Sbjct: 121 VIAEEVLHQALQFGKDDGSLDNVLLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFEFA 180

Query: 205 VVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 264
           + REGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG
Sbjct: 181 LGREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSG 240

Query: 265 YFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITY 324
           YFD+AIKVFESMKDSGLKPNLVTYNAVIDACGKG VEF RVVEIF+EMLRNGVQPDRITY
Sbjct: 241 YFDRAIKVFESMKDSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFDEMLRNGVQPDRITY 300

Query: 325 NSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPS 384
           NS LAVCSRGGLWEAAR+LF EM DRGIDQDIFTYNTLLDAVCKGGQMDLA EIMLEMP+
Sbjct: 301 NSLLAVCSRGGLWEAARNLFHEMVDRGIDQDIFTYNTLLDAVCKGGQMDLAFEIMLEMPA 360

Query: 385 KKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFED 444
           KKI PNVVTYSTMADGYAKAGRLEDALNLYNEMK LGIGLDRVSYNTL+SIYAKLGRFED
Sbjct: 361 KKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFED 420

Query: 445 ALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLID 504
           ALNVCREMGSSGVKKD VTYNALLDGYGKQGKF EVTRVFKEMKRDRV PNLLTYSTLID
Sbjct: 421 ALNVCREMGSSGVKKDAVTYNALLDGYGKQGKFNEVTRVFKEMKRDRVTPNLLTYSTLID 480

Query: 505 VYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 564
           VYSKGSL+EEAMEVF EFK+AGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP
Sbjct: 481 VYSKGSLFEEAMEVFHEFKQAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRP 540

Query: 565 NVVTYNSIIDAFGRSTTAESLV---GASSDRQSESPSLMLIEGVDERETENWDDDHAFKF 624
           NVVTYNSIIDAFGRSTT ESLV   GA+S+RQ E+PS MLIEGVDE E ENWDDDH  KF
Sbjct: 541 NVVTYNSIIDAFGRSTTVESLVDAVGAASERQRETPSFMLIEGVDESEMENWDDDHVVKF 600

Query: 625 YQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEA 684
           YQQLVSEKEGPAKKERLGK+EI SIL+VFKKMHEL+IKPNVVTFSAILNACSRCKSIE+A
Sbjct: 601 YQQLVSEKEGPAKKERLGKQEIRSILSVFKKMHELEIKPNVVTFSAILNACSRCKSIEDA 660

Query: 685 SMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLW 744
           SMLLEELRLFDNQVYGVAHGLLMG+SENVWIQAQ+LFDEVK+MDSSTASAFYNALTDMLW
Sbjct: 661 SMLLEELRLFDNQVYGVAHGLLMGYSENVWIQAQFLFDEVKQMDSSTASAFYNALTDMLW 720

Query: 745 HFGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 804
           HFGQKRGAQLVVLEGKRR VWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ
Sbjct: 721 HFGQKRGAQLVVLEGKRRKVWETLWSDSCLDLHLMSSGAARAMVHAWLLGIHSVVFNGHQ 780

Query: 805 LPKLLSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAWLK 864
           LPKLLSILTGWGKHSKVVGDGALRR I+ALL  MGAPFR+AKCNIGR+VSTGSVVAAWLK
Sbjct: 781 LPKLLSILTGWGKHSKVVGDGALRRVIEALLTGMGAPFRIAKCNIGRFVSTGSVVAAWLK 840

Query: 865 ESGTLKLLVLHDDRTHPDSENVDLISKLQMVSL 891
           ESGTLKLLVLHDDR HPDSENVDLISKLQM+SL
Sbjct: 841 ESGTLKLLVLHDDRIHPDSENVDLISKLQMISL 872

BLAST of Cp4.1LG12g06200 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 1068.1 bits (2761), Expect = 3.7e-312
Identity = 559/870 (64.25%), Postives = 671/870 (77.13%), Query Frame = 0

Query: 17  PSITVSVAMA----STPPHCSITTAKP----YQTHQYPHNNLKNHRRQNGSGTTTHAVSL 76
           PS + SV+ A    +TP    + T K      Q+ ++      NHR+   +    H    
Sbjct: 34  PSSSASVSSAHLSQTTPNFSPLQTPKSDFSGRQSTRFVSPATNNHRQTRQNPNYNH---- 93

Query: 77  VKP--LPPTPNHSAAKSASTSTSTP--LSQSPNFPSLRSLSTSKSELASNFSGRRSTRFV 136
            +P     +P  SA   +S +T  P  LSQ PNF  L+   T KS+L+S+FSGRRSTRFV
Sbjct: 94  -RPYGASSSPRGSAPPPSSVATVAPAQLSQPPNFSPLQ---TPKSDLSSDFSGRRSTRFV 153

Query: 137 SKFHVGRPKSSMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESKLCGSEDYTFLLRE 196
           SK H GR K++MATRH++ AE+ L  A+ F  +D    +++L+FESKLCGS+D T+++RE
Sbjct: 154 SKMHFGRQKTTMATRHSSAAEDALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTYIIRE 213

Query: 197 LGNRGECWKAIRCFDFAVVREGRKNERGKLASAMISTLGRLGKVELAKGVFETALSEGYG 256
           LGNR EC KA+  ++FAV RE RKNE+GKLASAMISTLGR GKV +AK +FETA + GYG
Sbjct: 214 LGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYG 273

Query: 257 NTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGKGVVEFGRVVE 316
           NTV+AFSALISAYG+SG  ++AI VF SMK+ GL+PNLVTYNAVIDACGKG +EF +V +
Sbjct: 274 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 333

Query: 317 IFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVC 376
            F+EM RNGVQPDRIT+NS LAVCSRGGLWEAAR+LF EM +R I+QD+F+YNTLLDA+C
Sbjct: 334 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 393

Query: 377 KGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRV 436
           KGGQMDLA EI+ +MP K+I PNVV+YST+ DG+AKAGR ++ALNL+ EM+ LGI LDRV
Sbjct: 394 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 453

Query: 437 SYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEM 496
           SYNTL+SIY K+GR E+AL++ REM S G+KKDVVTYNALL GYGKQGK+ EV +VF EM
Sbjct: 454 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 513

Query: 497 KRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSELINALCKNGLV 556
           KR+ V PNLLTYSTLID YSKG LY+EAME+FREFK AGL+ADVVLYS LI+ALCKNGLV
Sbjct: 514 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 573

Query: 557 DSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESPSLMLIEGVDE 616
            SAVSL+DEM KEGI PNVVTYNSIIDAFGRS T +      S   S   SL        
Sbjct: 574 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD-----RSADYSNGGSLPFSSSALS 633

Query: 617 RETENWDDDHAFKFYQQLVSEKEGPAKKE-RLGKEEIGSILNVFKKMHELQIKPNVVTFS 676
             TE  + +   + + QL +E      K+   G +E+  IL VF+KMH+L+IKPNVVTFS
Sbjct: 634 ALTET-EGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFS 693

Query: 677 AILNACSRCKSIEEASMLLEELRLFDNQVYGVAHGLLMGFSENVWIQAQYLFDEVKRMDS 736
           AILNACSRC S E+ASMLLEELRLFDN+VYGV HGLLMG  ENVW+QAQ LFD+V  MD 
Sbjct: 694 AILNACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQRENVWLQAQSLFDKVNEMDG 753

Query: 737 STASAFYNALTDMLWHFGQKRGAQLVVLEGKRRNVWETLWSDSCLDLHLMSSGAARAMVH 796
           STASAFYNALTDMLWHFGQKRGA+LV LEG+ R VWE +WSDSCLDLHLMSSGAARAMVH
Sbjct: 754 STASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCLDLHLMSSGAARAMVH 813

Query: 797 AWLLGIHSVVFNGHQLPKLLSILTGWGKHSKVVGDGALRRAIKALLASMGAPFRVAKCNI 856
           AWLL I S+V+ GH+LPK+LSILTGWGKHSKVVGDGALRRA++ LL  M APF ++KCN+
Sbjct: 814 AWLLNIRSIVYEGHELPKVLSILTGWGKHSKVVGDGALRRAVEVLLRGMDAPFHLSKCNM 873

Query: 857 GRYVSTGSVVAAWLKESGTLKLLVLHDDRT 874
           GR+ S+GSVVA WL+ES TLKLL+LHD  T
Sbjct: 874 GRFTSSGSVVATWLRESATLKLLILHDHIT 889

BLAST of Cp4.1LG12g06200 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 287.3 bits (734), Expect = 4.1e-77
Identity = 206/808 (25.50%), Postives = 396/808 (49.01%), Query Frame = 0

Query: 101 LRSLSTSKSELASNFSGRRSTRFVSKFHVGRPKSSMATRHTAIAEEVLHQALQFGKNDAS 160
           LR LS    +  S FSG+   +      +G P  S+     +   E L   L       S
Sbjct: 34  LRFLSGGNRKPCS-FSGKIKAK-TKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGS 93

Query: 161 LDNILLNFESKLCGSEDYTFLLRELGNRGECWKAIRCFDFAVVREGRKNERGKLASAMIS 220
           +   L  F++KL    D+  + +E   RG+  +++R F + + R+        + + MIS
Sbjct: 94  IARCLDIFKNKL-SLNDFALVFKEFAGRGDWQRSLRLFKY-MQRQIWCKPNEHIYTIMIS 153

Query: 221 TLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKP 280
            LGR G ++    VF+   S+G   +VF+++ALI+AYG++G ++ ++++ + MK+  + P
Sbjct: 154 LLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISP 213

Query: 281 NLVTYNAVIDACGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSL 340
           +++TYN VI+AC +G +++  ++ +F EM   G+QPD +TYN+ L+ C+  GL + A  +
Sbjct: 214 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 273

Query: 341 FSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAK 400
           F  M D GI  D+ TY+ L++   K  +++   +++ EM S    P++ +Y+ + + YAK
Sbjct: 274 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 333

Query: 401 AGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVT 460
           +G +++A+ ++++M+  G   +  +Y+ L++++ + GR++D   +  EM SS    D  T
Sbjct: 334 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAAT 393

Query: 461 YNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 520
           YN L++ +G+ G F EV  +F +M  + + P++ TY  +I    KG L+E+A ++ +   
Sbjct: 394 YNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMT 453

Query: 521 RAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAE 580
              +      Y+ +I A  +  L + A+   + M + G  P++ T++S++ +F R    +
Sbjct: 454 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 513

Query: 581 S-------LVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKE 640
                   LV +   R  ++ +  +     E   +    + A K Y  +   +  P ++ 
Sbjct: 514 ESEAILSRLVDSGIPRNRDTFNAQI-----EAYKQGGKFEEAVKTYVDMEKSRCDPDERT 573

Query: 641 RLGKEEIGSILNV-------FKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEE-L 700
                 + S   +       F++M    I P+++ +  +L    + +  ++ + LLEE L
Sbjct: 574 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 633

Query: 701 RLFDNQVYGVAHGLLMG--FSENVWIQAQYLFDEVKRMDSSTASAFYNALTDMLWHFGQK 760
               + ++ V   ++ G    ++ W   +Y+ D++          FYNAL D LW  GQK
Sbjct: 634 SNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQK 693

Query: 761 RGAQLVVLEGKRRNVWETLWSDSCL----DLHLMSSGAARAMVHAWLLGIHSVVFNGHQL 820
             A  V+ E  +R ++  L+  + L    D+H MS G     +  WL  I+ ++  G  L
Sbjct: 694 ERAARVLNEATKRGLFPELFRKNKLVWSVDVHRMSEGGMYTALSVWLNDINDMLLKG-DL 753

Query: 821 PKLLSILTGWG---KHSKVVGDGALRRAIKALLASMGAPFRVAKCNIGRYVSTGSVVAAW 880
           P+L  +++  G   K S        + A   L   + + F     N GR +         
Sbjct: 754 PQLAVVVSVRGQLEKSSAARESPIAKAAFSFLQDHVSSSFSFTGWNGGRIMC-------- 813

Query: 881 LKESGTLKLLVLHDDRTHPDSENVDLIS 885
             +   LK L+   + T  +SEN +L++
Sbjct: 814 --QRSQLKQLLSTKEPTSEESENKNLVA 821

BLAST of Cp4.1LG12g06200 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 266.2 bits (679), Expect = 9.7e-71
Identity = 188/684 (27.49%), Postives = 339/684 (49.56%), Query Frame = 0

Query: 70  KPLPPTPNHSAAKSASTSTSTPLSQSPNFP--------SLRSLSTSKSELASNFSGRRST 129
           KP     NH  +++   +TS  LS  P  P         L     S+  ++S  S  R+ 
Sbjct: 18  KPYSHDQNHHISRTPFLTTS--LSSPPPPPVEPLLHDVFLHQNPNSRQPISSQTSRNRNR 77

Query: 130 RFVSKF---HVGRPKS--SMATRHTAIAEEVLHQALQFGKNDASLDNILLNFESK-LCGS 189
             + K    ++G+P S   ++ +   +   ++      G+ D+ L  +   F+ K    S
Sbjct: 78  TRIGKSRDPNLGKPWSYHGLSPQGQQVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTS 137

Query: 190 EDYTFLLRELGNRGECWKAIRCFD-FAVVREGRKNERGKLASAMISTLGRLGKVELAKGV 249
            +    L+ LG   +   A+R FD F   ++ +      + + +IS LG+ G+V  A  +
Sbjct: 138 SELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANM 197

Query: 250 FETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKDSGLKPNLVTYNAVIDACGK 309
           F     +G+   V+++++LISA+  SG + +A+ VF+ M++ G KP L+TYN +++  GK
Sbjct: 198 FNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK 257

Query: 310 GVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSRGGLWEAARSLFSEMADRGIDQDIF 369
               + ++  + E+M  +G+ PD  TYN+ +  C RG L + A  +F EM   G   D  
Sbjct: 258 MGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKV 317

Query: 370 TYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYSTMADGYAKAGRLEDALNLYNEM 429
           TYN LLD   K  +   A +++ EM     SP++VTY+++   YA+ G L++A+ L N+M
Sbjct: 318 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQM 377

Query: 430 KLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSSGVKKDVVTYNALLDGYGKQGKF 489
              G   D  +Y TL+S + + G+ E A+++  EM ++G K ++ T+NA +  YG +GKF
Sbjct: 378 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 437

Query: 490 TEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEAMEVFREFKRAGLKADVVLYSEL 549
           TE+ ++F E+    + P+++T++TL+ V+ +  +  E   VF+E KRAG   +   ++ L
Sbjct: 438 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 497

Query: 550 INALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDAFGRSTTAESLVGASSDRQSESP 609
           I+A  + G  + A+++   M+  G+ P++ TYN+++ A  R    E         QSE  
Sbjct: 498 ISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWE---------QSEK- 557

Query: 610 SLMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKKERLGKEEIGSILNVFKKMHELQ 669
             +L E  D R   N        +   L +   G         +EIG + ++ ++++   
Sbjct: 558 --VLAEMEDGRCKPN-----ELTYCSLLHAYANG---------KEIGLMHSLAEEVYSGV 617

Query: 670 IKPNVVTFSAILNACSRCKSIEEASMLLEEL--RLFDNQVYGVAHGLLMGFSENVWIQAQ 729
           I+P  V    ++  CS+C  + EA     EL  R F   +  +   + +     +  +A 
Sbjct: 618 IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKAN 673

Query: 730 YLFDEVKRMDSSTASAFYNALTDM 737
            + D +K    + + A YN+L  M
Sbjct: 678 GVLDYMKERGFTPSMATYNSLMYM 673

BLAST of Cp4.1LG12g06200 vs. TAIR 10
Match: AT5G01110.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 218.4 bits (555), Expect = 2.3e-56
Identity = 152/546 (27.84%), Postives = 271/546 (49.63%), Query Frame = 0

Query: 160 SLDNILLNFESKLCGSEDYTFLL--------RELGNRGECWKAIRCFDFAVVREGRKNER 219
           SLD+   N     CGS D  F L        R+L    E +  +R   F V  +      
Sbjct: 153 SLDSTFSN-----CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDA----- 212

Query: 220 GKLASAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFE 279
               +A+I +L R+G VELA GV++     G G  V+  + +++A  K G  ++      
Sbjct: 213 ---CNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 272

Query: 280 SMKDSGLKPNLVTYNAVIDA-CGKGVVEFGRVVEIFEEMLRNGVQPDRITYNSFLAVCSR 339
            +++ G+ P++VTYN +I A   KG++E     E+   M   G  P   TYN+ +    +
Sbjct: 273 QVQEKGVYPDIVTYNTLISAYSSKGLME--EAFELMNAMPGKGFSPGVYTYNTVINGLCK 332

Query: 340 GGLWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVT 399
            G +E A+ +F+EM   G+  D  TY +LL   CK G +    ++  +M S+ + P++V 
Sbjct: 333 HGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 392

Query: 400 YSTMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMG 459
           +S+M   + ++G L+ AL  +N +K  G+  D V Y  L+  Y + G    A+N+  EM 
Sbjct: 393 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 452

Query: 460 SSGVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYE 519
             G   DVVTYN +L G  K+    E  ++F EM    ++P+  T + LID + K    +
Sbjct: 453 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 512

Query: 520 EAMEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSII 579
            AME+F++ K   ++ DVV Y+ L++   K G +D+A  +  +M+ + I P  ++Y+ ++
Sbjct: 513 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILV 572

Query: 580 DAF-GRSTTAESL-VGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVSEKEG 639
           +A   +   AE+  V      ++  P++M+   + +    + +      F ++++SE   
Sbjct: 573 NALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFV 632

Query: 640 PAKKER-------LGKEEIGSILNVFKKMHELQ--IKPNVVTFSAILNACSRCKSIEEAS 686
           P            + +E +     + KKM E Q  + P+V T+++IL+   R   ++EA 
Sbjct: 633 PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAE 683

BLAST of Cp4.1LG12g06200 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 215.3 bits (547), Expect = 2.0e-55
Identity = 139/527 (26.38%), Postives = 255/527 (48.39%), Query Frame = 0

Query: 216 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDQAIKVFESMKD 275
           S   S + R  +  L     +     G  + ++  + +I+ + +      A  V   +  
Sbjct: 92  SRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK 151

Query: 276 SGLKPNLVTYNAVIDACGKGVVEFGRVVE---IFEEMLRNGVQPDRITYNSFLAVCSRGG 335
            G +P+  T+N +I    KG+   G+V E   + + M+ NG QPD +TYNS +    R G
Sbjct: 152 LGYEPDTTTFNTLI----KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSG 211

Query: 336 LWEAARSLFSEMADRGIDQDIFTYNTLLDAVCKGGQMDLAHEIMLEMPSKKISPNVVTYS 395
               A  L  +M +R +  D+FTY+T++D++C+ G +D A  +  EM +K I  +VVTY+
Sbjct: 212 DTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYN 271

Query: 396 TMADGYAKAGRLEDALNLYNEMKLLGIGLDRVSYNTLVSIYAKLGRFEDALNVCREMGSS 455
           ++  G  KAG+  D   L  +M    I  + +++N L+ ++ K G+ ++A  + +EM + 
Sbjct: 272 SLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITR 331

Query: 456 GVKKDVVTYNALLDGYGKQGKFTEVTRVFKEMKRDRVYPNLLTYSTLIDVYSKGSLYEEA 515
           G+  +++TYN L+DGY  Q + +E   +   M R++  P+++T+++LI  Y      ++ 
Sbjct: 332 GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDG 391

Query: 516 MEVFREFKRAGLKADVVLYSELINALCKNGLVDSAVSLLDEMIKEGIRPNVVTYNSIIDA 575
           M+VFR   + GL A+ V YS L+   C++G +  A  L  EM+  G+ P+V+TY  ++D 
Sbjct: 392 MKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 451

Query: 576 FGRSTTAESLVGASSDRQSESPSLMLIEGVDERETENWDDDHAFKFYQQLVSEKEGPAKK 635
              +   E  +    D Q     L ++                   Y  ++   EG  K 
Sbjct: 452 LCDNGKLEKALEIFEDLQKSKMDLGIV------------------MYTTII---EGMCKG 511

Query: 636 ERLGKEEIGSILNVFKKMHELQIKPNVVTFSAILNACSRCKSIEEASMLLEELRLFDNQV 695
              GK E     N+F  +    +KPNV+T++ +++   +  S+ EA++LL ++    N  
Sbjct: 512 ---GKVE--DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 571

Query: 696 YGVAHGLLM--GFSENVWIQAQYLFDEVKRMDSSTASAFYNALTDML 738
               +  L+     +     +  L +E+K    S  ++    + DML
Sbjct: 572 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588