Cp4.1LG12g04890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g04890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
Location	Cp4.1LG12: 4810493 .. 4813545 (-)
RNA-Seq Expression	Cp4.1LG12g04890
Synteny	Cp4.1LG12g04890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATTTACTATTATTATTTTTAATTAAACCGAGACTTCAGACTTCGTTTCTCGAGCTCCATTTTTGGATTCCTTCAATTCGTCTCTTCGATTTCGTTGGTCCTCTTCCACAGTGAAGAACTGATGCACGAAGAAGAAAGCTGCGCCTGTATTCTTTGGTTCATTCGGAACAGTTCAAAGAGGATTAGCGGTTGAAATCAAGATAAATCTGAGCTGCTCAGGTTAATTTTGCTTCAAATCTGATTTTTAATTTCCCCTCATCCTCTCGCCCTCTCCATCCCCAAGGGAGAACTGCATTTTGATTTATGTTCTTTTGTTTGTAATCTTATGATTCCAATCGCCAGGCATTTTCTGTTGAATTACTGCGGTTGTGTTGAAGTTTTGTTTCACTTTATAAAAGAGGAGGGTTGTATTTCTGCTATATTGATCTAGAAAAACCTCTTTTATTATGCTTTTGAGGTTGTGGGGGTTCGGTGTGACTTTTTGTGTCCTTGGTGATATTTTAATTTCTGTGGGGATTGGTGTGGAAGGATGAGAATCTCGCTTATTCTTCTGTTGCTGTAAGCTTCTTTCCCACAAATTATTAGTCGAATTAGGCTTCCACTGTTTCAAATGATTTTCCAAAATGGGGAATCTGAGGTTCGCTCTTTTAAAATTTGCACTCCATTTTCTAAGGAAGAGTTCAATTTATTTATTTATTATGCATTGAATCTTATGATATGCCTCCTGGAAAGAACTTGATGCTATTTTCTGCTTGTGGAATGCTGGAAAATCATTTGGTGATCAGGATTTCTTTTTCCCAAAGATTTTTTAGCCCAAAAATCTTGATGTATATCAAATCAAGAAAACAATGGAGTGACAATAAATACCACATGACTTTCGAAATGATTTTCGAAATTGATTTGAAGACTTTTTGTCTTTGGGAGGAACTACCATTTAAAACTATTTATGTCATGTCTTACTTTCTTCGATTTTCATAGATTCAAAGTTAAATCTAAGAGTTATTCATCCTTCGAACCAGCTCTTGGTTGGAATCAATTCGTTAAGTTTGTGAAAGTTTACAAAGATCCTAGAAGAAGCTTTAGCTTTGCAAATCCAGCAATTGTTACTGCTTATCATTGTCTTCCAAATGCATTTATATTTTTTTGTTCCTTGCTTCAAATTCTAGATGATTTGTGTTGTTACGATGCCTTCATCATGTGATGTCATTCTATTTTCGGAGTGAAATCTTTCAATGTGATAAATACAACATCTTGTGCTGCTATTCCCTGTTTAAACTTGGATTTATTTACTAAACACCACATCTAACTTGAATGATTTGTCATATCATCTTTCAGGAGTCTTTCATGTAATTGTTCTGTCTTCTACAAGTTTGAGTTCAAGAAATGTTTATGACATTTATTTGGAATCTCCACTCTTTCTAGTGCCCTGGTTTTCAACGTGAATCCAAGAAACTTGACCATCTGTTCCACCGAAGGAGCACACCATGCAAATAGCTTGTCAACCCCATCCACTGGTTTACTTCCCTATCAGGTCTCTCTCTTCTCTCCCTCGTGCGCGAAACTTCTCATTGTTATTTTCACTTCTAAATCGAAATTTGAATCTGAAATGCAGAAGCAGCTCTAAAAGACGAGATGAATGGAAGAACATACAGAATTTGCATTCAAGAAGCTTTGTTAAACTTGTATTTTTGGAACCTCAGACTCATAAATTTGCTAGGCCACTGTGCAAAAACAGATTGTATGCAATCCCACATGAAGAAGATGGGCGCCCTTCTGCCTCAATGCCAGAGGACGTTAATTCGAAACCAATGCTTAATTCTATAGCAGAGGAGTTGGGGAACAAATGGTCGCCTCCAAGATATCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTCATTATGAGGACTTTAAAGGGTAAAATCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGTCTTCTAACATCTGCATTTGTTGGCATGGCTTTTTCTATCCAATTTGTCAGAGAATTTACTAGATTAGGATTAAACAGGTCTGTTGGTGGTGTATTAGCTTTGGCATTCTCAAGGGAGCTAAGTCCCGTGATTACGTCGATTGTGGTTGCAGGGAGAATTGGAAGTTCATACGCTGCAGAATTAGGAACAATGCAAGTCTCAGAGCAAACCGACACGTTAAGAATCTTGGGTTCAAACCCTGTCGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCAATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCTCTTTTGGCTGACAGTGTTTATGGTATTAGCATCAACATTATCATTGACTCAGCTCTAAGAGCTCTAAAATCGTGGGATATAATCAGCGCGATGATCAAATCGCAGGTTTTCGGTGCTATCATATCGATTGTAAGCTGTGCTTGGGGTATCACTACTTCCGGGGGTGCTAAGGGGGTTGGGGAGTCCACAACTTCAGCCGTTGTCATCTCTCTTGTGGGCATATTCATTGCTGATTTCACCCTTTCTTGTTTCTTCTTCCAAGGAGCTGGAGATTCCCTCAAGAACTGTATGTAAATTCATTGAGCATACTCACAAATACTTCTACATTATTCAGTGGGGCAAAGAGCATGTCAGAATCTGCTGTTTACATAAAAACATGTCTCCAAGAAGTTCTACAAATGGGAAGCCATTGGAGGTATGTGTGAGTTTTAGTTTAATTTGTTTTTGGGCTGAAACAACAACTTTCTGGCTTTTCTTGCTGTTTTCTTATTGTCTAGCAAAGAAGATGCCTTTTTAACGTAGGATTTAAACAGTCCATGATATCTTCCACTTTCGATTGAGTTTTTGAATCTCAGCTCATGTTTTTAAGTAGAACTTTTGACAAATAATATGATTCTGCCACTAGATGGGTCACTTAAAAACCCATCTAAAATTTGTAACAATTTAATCTCTCCTGTAAAAAAATAATATTACAATAAAGAAAAAAAATCAAAACATAGGTAACAA

mRNA sequence

TATTTACTATTATTATTTTTAATTAAACCGAGACTTCAGACTTCGTTTCTCGAGCTCCATTTTTGGATTCCTTCAATTCGTCTCTTCGATTTCGTTGGTCCTCTTCCACAGTGAAGAACTGATGCACGAAGAAGAAAGCTGCGCCTGTATTCTTTGGTTCATTCGGAACAGTTCAAAGAGGATTAGCGGTTGAAATCAAGATAAATCTGAGCTGCTCAGGAGTCTTTCATGTAATTGTTCTGTCTTCTACAAGTTTGAGTTCAAGAAATGTTTATGACATTTATTTGGAATCTCCACTCTTTCTAGTGCCCTGGTTTTCAACGTGAATCCAAGAAACTTGACCATCTGTTCCACCGAAGGAGCACACCATGCAAATAGCTTGTCAACCCCATCCACTGGTTTACTTCCCTATCAGAAGCAGCTCTAAAAGACGAGATGAATGGAAGAACATACAGAATTTGCATTCAAGAAGCTTTGTTAAACTTGTATTTTTGGAACCTCAGACTCATAAATTTGCTAGGCCACTGTGCAAAAACAGATTGTATGCAATCCCACATGAAGAAGATGGGCGCCCTTCTGCCTCAATGCCAGAGGACGTTAATTCGAAACCAATGCTTAATTCTATAGCAGAGGAGTTGGGGAACAAATGGTCGCCTCCAAGATATCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTCATTATGAGGACTTTAAAGGGTAAAATCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGTCTTCTAACATCTGCATTTGTTGGCATGGCTTTTTCTATCCAATTTGTCAGAGAATTTACTAGATTAGGATTAAACAGGTCTGTTGGTGGTGTATTAGCTTTGGCATTCTCAAGGGAGCTAAGTCCCGTGATTACGTCGATTGTGGTTGCAGGGAGAATTGGAAGTTCATACGCTGCAGAATTAGGAACAATGCAAGTCTCAGAGCAAACCGACACGTTAAGAATCTTGGGTTCAAACCCTGTCGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCAATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCTCTTTTGGCTGACAGTGTTTATGGTATTAGCATCAACATTATCATTGACTCAGCTCTAAGAGCTCTAAAATCGTGGGATATAATCAGCGCGATGATCAAATCGCAGGTTTTCGGTGCTATCATATCGATTGTAAGCTGTGCTTGGGGTATCACTACTTCCGGGGGTGCTAAGGGGGTTGGGGAGTCCACAACTTCAGCCGTTGTCATCTCTCTTGTGGGCATATTCATTGCTGATTTCACCCTTTCTTGTTTCTTCTTCCAAGGAGCTGGAGATTCCCTCAAGAACTGTATGTAAATTCATTGAGCATACTCACAAATACTTCTACATTATTCAGTGGGGCAAAGAGCATGTCAGAATCTGCTGTTTACATAAAAACATGTCTCCAAGAAGTTCTACAAATGGGAAGCCATTGGAGGTATGTGTGAGTTTTAGTTTAATTTGTTTTTGGGCTGAAACAACAACTTTCTGGCTTTTCTTGCTGTTTTCTTATTGTCTAGCAAAGAAGATGCCTTTTTAACGTAGGATTTAAACAGTCCATGATATCTTCCACTTTCGATTGAGTTTTTGAATCTCAGCTCATGTTTTTAAGTAGAACTTTTGACAAATAATATGATTCTGCCACTAGATGGGTCACTTAAAAACCCATCTAAAATTTGTAACAATTTAATCTCTCCTGTAAAAAAATAATATTACAATAAAGAAAAAAAATCAAAACATAGGTAACAA

Coding sequence (CDS)

ATGCAAATAGCTTGTCAACCCCATCCACTGGTTTACTTCCCTATCAGAAGCAGCTCTAAAAGACGAGATGAATGGAAGAACATACAGAATTTGCATTCAAGAAGCTTTGTTAAACTTGTATTTTTGGAACCTCAGACTCATAAATTTGCTAGGCCACTGTGCAAAAACAGATTGTATGCAATCCCACATGAAGAAGATGGGCGCCCTTCTGCCTCAATGCCAGAGGACGTTAATTCGAAACCAATGCTTAATTCTATAGCAGAGGAGTTGGGGAACAAATGGTCGCCTCCAAGATATCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTCATTATGAGGACTTTAAAGGGTAAAATCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGTCTTCTAACATCTGCATTTGTTGGCATGGCTTTTTCTATCCAATTTGTCAGAGAATTTACTAGATTAGGATTAAACAGGTCTGTTGGTGGTGTATTAGCTTTGGCATTCTCAAGGGAGCTAAGTCCCGTGATTACGTCGATTGTGGTTGCAGGGAGAATTGGAAGTTCATACGCTGCAGAATTAGGAACAATGCAAGTCTCAGAGCAAACCGACACGTTAAGAATCTTGGGTTCAAACCCTGTCGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCAATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCTCTTTTGGCTGACAGTGTTTATGGTATTAGCATCAACATTATCATTGACTCAGCTCTAAGAGCTCTAAAATCGTGGGATATAATCAGCGCGATGATCAAATCGCAGGTTTTCGGTGCTATCATATCGATTGTAAGCTGTGCTTGGGGTATCACTACTTCCGGGGGTGCTAAGGGGGTTGGGGAGTCCACAACTTCAGCCGTTGTCATCTCTCTTGTGGGCATATTCATTGCTGATTTCACCCTTTCTTGTTTCTTCTTCCAAGGAGCTGGAGATTCCCTCAAGAACTGTATGTAA

Protein sequence

MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM

Homology

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BLAST of Cp4.1LG12g04890 vs. ExPASy Swiss-Prot
Match: Q8L4R0 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD1 PE=1 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 2.4e-126
Identity = 231/309 (74.76%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFT 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVCLLTS FVGMAF+IQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLR+LG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy Swiss-Prot
Match: P73009 (Probable ABC transporter permease protein slr1045 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1045 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 3.3e-67
Identity = 128/256 (50.00%), Postives = 188/256 (73.44%), Query Frame = 0


Query: 91  GNKWSPPRYLWRGLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVG 150
           G++ S   +  R ++  FLTGQV +  L+G+I+ +NTL+Q+  VGP S+ + L+T+ FVG
Sbjct: 5   GSRHSLSLWFQRLVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVG 64

Query: 151 MAFSIQFVREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSE 210
           M F+IQ  REF   G   ++GGVL+L+ +REL+PV+T++V+AGR+GS++AAE+GTM+V+E
Sbjct: 65  MVFTIQVAREFIYYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTE 124

Query: 211 QTDTLRILGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIID 270
           Q D L +L ++P+DYLV PRVIA  + LPILT +   VGMA   +++ S+Y I+  I ++
Sbjct: 125 QLDALYMLRTDPIDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLN 184

Query: 271 SALRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFI 330
           S     + WD+ + + KS VFG II+I+ C+WG+TT+GGAKGVGESTT+AVV SL+ IFI
Sbjct: 185 SVQNFTQLWDVFACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFI 244

Query: 331 ADFTLSCFFFQGAGDS 347
           ++F LS   FQG GD+
Sbjct: 245 SNFFLSWLMFQGTGDT 260

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy Swiss-Prot
Match: P51393 (Probable ABC transporter permease protein ycf63 OS=Porphyra purpurea OX=2787 GN=ycf63 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.4e-54
Identity = 113/243 (46.50%), Postives = 161/243 (66.26%), Query Frame = 0


Query: 105 SVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRL 164
           S L L   ++ R    KI+  +  +Q+  VGP S+ + LLT+ F+ M F++Q  +EF  L
Sbjct: 15  STLSLFVSLLARLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISMVFTMQIAKEFLHL 74

Query: 165 GLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVD 224
               ++G V+ +AF+RELSPV+T++++AG+IGSS+ AE+ TM+ +EQ D L +L +NP+D
Sbjct: 75  DAASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYLLNTNPID 134

Query: 225 YLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISA 284
           YLV P+V A CI LPIL+ +  T  +A S  ++  +YGI  +I + SA  AL   D  S 
Sbjct: 135 YLVFPKVAACCIMLPILSTISLTASIAISIFVSFVMYGIPSSIFLKSAFLALSVSDFFSC 194

Query: 285 MIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAG 344
           + KS  FG II+ +SC WG+T+SGGAKGVG STTS+VV  L+ IFI DF LS F FQ  G
Sbjct: 195 LQKSLCFGTIIAFISCQWGLTSSGGAKGVGNSTTSSVVTILLTIFITDFILSYFMFQSTG 254

Query: 345 DSL 348
            S+
Sbjct: 255 SSI 257

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy Swiss-Prot
Match: Q1XD94 (Probable ABC transporter permease protein ycf63 OS=Pyropia yezoensis OX=2788 GN=ycf63 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 4.3e-51
Identity = 105/250 (42.00%), Postives = 164/250 (65.60%), Query Frame = 0


Query: 98  RYLWRGLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQF 157
           +++ R  S + L  ++++R    K++  N ++Q+  VGP S+ + LLT+ F+ M F++Q 
Sbjct: 8   KWIQRFSSTIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQI 67

Query: 158 VREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRI 217
            +EF  L    ++G V+ +AF+RELSPV+T++++AG+IGSS+ AE+ TM+ +EQ D L +
Sbjct: 68  AKEFLYLDAASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYL 127

Query: 218 LGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALK 277
           L +NP+DYLV P+V +  + LPIL+++  T  +A S  +A  +Y I  ++ + SA  AL 
Sbjct: 128 LNTNPIDYLVFPKVASCFLMLPILSIISLTASIAISLFVAFVMYDIPSSVFLKSAFNALS 187

Query: 278 SWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSC 337
             D +  + KS  F  II  +SC WG+T++GGAKGVG STTS+VV  L  +FI DF LS 
Sbjct: 188 ISDFLICLEKSMFFAIIIGFISCQWGLTSNGGAKGVGNSTTSSVVTILFTVFITDFVLSY 247

Query: 338 FFFQGAGDSL 348
           F FQ  G S+
Sbjct: 248 FMFQTTGSSI 257

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy Swiss-Prot
Match: Q9ZE51 (Probable ABC transporter permease protein RP096 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP096 PE=3 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.2e-34
Identity = 87/228 (38.16%), Postives = 137/228 (60.09%), Query Frame = 0


Query: 114 IMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGV 173
           I   +K  ++    ++QL  +G  S+ V  +T+ F G   ++Q    F+R     S+  V
Sbjct: 31  ISSIIKPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATV 90

Query: 174 LALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIA 233
           + L+ +REL PV+  ++VAGR+G+S AAE+ TM+V+EQ D L  L ++P+ YLV PRVIA
Sbjct: 91  VVLSLTRELGPVLAGLIVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIA 150

Query: 234 SCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGA 293
           + I +P L L+   +G+    L+       +    + S  + L+  D+IS +IK+ VFG 
Sbjct: 151 AIITMPCLVLIGDIIGVMGGYLVGIYKLDFNSTAYLTSTFQYLEPIDVISGLIKATVFGF 210

Query: 294 IISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQ 342
           IISI+SC  G  +  GAKGVG +TTSAVV S + I I+++ ++  FF+
Sbjct: 211 IISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFK 258

[Close]

BLAST of Cp4.1LG12g04890 vs. NCBI nr
Match: XP_023549316.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023549318.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 686 bits (1770), Expect = 1.16e-248
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. NCBI nr
Match: XP_022992323.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022992324.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita maxima] >XP_022992325.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 679 bits (1751), Expect = 9.16e-246
Identity = 347/351 (98.86%), Postives = 349/351 (99.43%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYF IRS SKR+DEWKN+QNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSISKRQDEWKNVQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. NCBI nr
Match: XP_022929897.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022929899.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita moschata] >XP_022929900.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 676 bits (1744), Expect = 1.07e-244
Identity = 346/351 (98.58%), Postives = 348/351 (99.15%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYF IRSSSKR+DEWKN+QNLHSRS VK VFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. NCBI nr
Match: KAG7013875.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 675 bits (1741), Expect = 3.06e-244
Identity = 345/351 (98.29%), Postives = 348/351 (99.15%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIAC PHPLVYF IRSSSKR+DEWKN+QNLHSRS VKLVFLEPQTHKF+RPLCKNRLYA
Sbjct: 1   MQIACLPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKLVFLEPQTHKFSRPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. NCBI nr
Match: XP_038886545.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Benincasa hispida] >XP_038886546.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 635 bits (1639), Expect = 1.07e-228
Identity = 321/351 (91.45%), Postives = 338/351 (96.30%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           M IACQPHPLVYF +RSSSKR+D WKN+QNLHSR+FVKLVF+EPQTHKFA PLCKNRL  
Sbjct: 1   MLIACQPHPLVYFSVRSSSKRQDGWKNVQNLHSRNFVKLVFVEPQTHKFAMPLCKNRLNG 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+S+A EL NKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGHPSASMSEDINSNPVLDSMAGELWNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           K+HW+NTLQQLERVGPRSVGVCLLTSAFVGMAF+IQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLR+LGSNPVDYLVTPRV+ASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVLASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYG+SINII+DSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITT GGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTLGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy TrEMBL
Match: A0A6J1JVE0 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488667 PE=3 SV=1)

HSP 1 Score: 679 bits (1751), Expect = 4.43e-246
Identity = 347/351 (98.86%), Postives = 349/351 (99.43%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYF IRS SKR+DEWKN+QNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSISKRQDEWKNVQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy TrEMBL
Match: A0A6J1EQ38 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436364 PE=3 SV=1)

HSP 1 Score: 676 bits (1744), Expect = 5.17e-245
Identity = 346/351 (98.58%), Postives = 348/351 (99.15%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYF IRSSSKR+DEWKN+QNLHSRS VK VFLEPQTHKFARPLCKNRLYA
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRQDEWKNVQNLHSRSLVKPVFLEPQTHKFARPLCKNRLYA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy TrEMBL
Match: A0A0A0KC25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022380 PE=3 SV=1)

HSP 1 Score: 634 bits (1635), Expect = 2.11e-228
Identity = 321/351 (91.45%), Postives = 338/351 (96.30%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLVYF +RS SKR+D W+N+QNLHSR+FVKLV LEPQ HKFA  LCKNRL+A
Sbjct: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+SIA EL NKWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           K+HWKNTLQQLERVGPRSVGVCLLTSAFVGMAF+IQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLR+LGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYG+SINII+DSA+RALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy TrEMBL
Match: A0A1S3BD54 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488585 PE=3 SV=1)

HSP 1 Score: 627 bits (1617), Expect = 1.17e-225
Identity = 321/351 (91.45%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLV F IRSSSKR+D WKN+QNLHSR+ VKLVFLE Q HKFA  LCKNRL+A
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+SIA EL +KWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           K+HWKNTLQQLERVGPRSVGVCLLTSAFVGMAF+IQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLR+LGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYG+SINII+DSALRALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. ExPASy TrEMBL
Match: A0A5D3D286 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3919G00030 PE=3 SV=1)

HSP 1 Score: 627 bits (1617), Expect = 1.17e-225
Identity = 321/351 (91.45%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 1   MQIACQPHPLVYFPIRSSSKRRDEWKNIQNLHSRSFVKLVFLEPQTHKFARPLCKNRLYA 60
           MQIACQPHPLV F IRSSSKR+D WKN+QNLHSR+ VKLVFLE Q HKFA  LCKNRL+A
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPHEEDGRPSASMPEDVNSKPMLNSIAEELGNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120
           IP+ EDG PSASM ED+NS P+L+SIA EL +KWSPPRYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFTRLGLNRSVGGVLALAFSR 180
           K+HWKNTLQQLERVGPRSVGVCLLTSAFVGMAF+IQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLR+LGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYG+SINII+DSALRALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of Cp4.1LG12g04890 vs. TAIR 10
Match: AT1G19800.2 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-127
Identity = 231/309 (74.76%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFT 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVCLLTS FVGMAF+IQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLR+LG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

[Close]

BLAST of Cp4.1LG12g04890 vs. TAIR 10
Match: AT1G19800.3 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-127
Identity = 231/309 (74.76%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFT 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVCLLTS FVGMAF+IQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLR+LG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

[Close]

BLAST of Cp4.1LG12g04890 vs. TAIR 10
Match: AT1G19800.1 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-127
Identity = 231/309 (74.76%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 45  QTHKFARPLCKNRLYAIPHEEDGRPSASMPEDVNS--KPMLNSIAEELGNKWSPPRYLWR 104
           Q++  + P+ + RLY   +  DG PS SM E+  S      +  AE   +KWSP +Y+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKIHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFSIQFVREFT 164
           GLSV  + GQV++R LKGKIHW+NTLQQLER GP+S+GVCLLTS FVGMAF+IQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRILGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLR+LG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGISINIIIDSALRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYGISINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4R0	2.4e-126	74.76	Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
P73009	3.3e-67	50.00	Probable ABC transporter permease protein slr1045 OS=Synechocystis sp. (strain P...	[more]
P51393	5.4e-54	46.50	Probable ABC transporter permease protein ycf63 OS=Porphyra purpurea OX=2787 GN=...	[more]
Q1XD94	4.3e-51	42.00	Probable ABC transporter permease protein ycf63 OS=Pyropia yezoensis OX=2788 GN=...	[more]
Q9ZE51	6.2e-34	38.16	Probable ABC transporter permease protein RP096 OS=Rickettsia prowazekii (strain...	[more]

BLAST of Cp4.1LG12g04890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549316.1	1.16e-248	100.00	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita ...	[more]
XP_022992323.1	9.16e-246	98.86	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita ...	[more]
XP_022929897.1	1.07e-244	98.58	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 [Cucurbita ...	[more]
KAG7013875.1	3.06e-244	98.29	Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucurbita argyrosperma sub...	[more]
XP_038886545.1	1.07e-228	91.45	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Benincasa hispi...	[more]

BLAST of Cp4.1LG12g04890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JVE0	4.43e-246	98.86	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A6J1EQ38	5.17e-245	98.58	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like isoform X1 OS=Cucurbit...	[more]
A0A0A0KC25	2.11e-228	91.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022380 PE=3 SV=1	[more]
A0A1S3BD54	1.17e-225	91.45	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo ...	[more]
A0A5D3D286	1.17e-225	91.45	Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Cp4.1LG12g04890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19800.2	1.7e-127	74.76	trigalactosyldiacylglycerol 1	[more]
AT1G19800.3	1.7e-127	74.76	trigalactosyldiacylglycerol 1	[more]
AT1G19800.1	1.7e-127	74.76	trigalactosyldiacylglycerol 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003453	ABC transport permease subunit MlaE, Proteobacteria	TIGRFAM	TIGR00056	TIGR00056	coord: 105..342 e-value: 2.6E-74 score: 248.1
IPR030802	ABC transporter permease MalE	PFAM	PF02405	MlaE	coord: 128..336 e-value: 3.7E-68 score: 229.4
IPR030802	ABC transporter permease MalE	PANTHER	PTHR30188	ABC TRANSPORTER PERMEASE PROTEIN-RELATED	coord: 1..351
None	No IPR available	PANTHER	PTHR30188:SF4	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 1, CHLOROPLASTIC	coord: 1..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04890.1	Cp4.1LG12g04890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043190	ATP-binding cassette (ABC) transporter complex