Cp4.1LG12g04870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGTCGGAGGCAATCAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGCACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATCCCGATTTGATGAAGGAGGTCTGCAGAAGGCTTTAG ATGGCGGAGTCGGAGGCAATCAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGCACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATCCCGATTTGATGAAGGAGGTCTGCAGAAGGCTTTAG ATGGCGGAGTCGGAGGCAATCAGGGCAGAATGCGAGCGAATCTTCAACCGCTTCGACTGCAACGGGGACGGCAAGATCTCGCTGTCGGAGTTGGAGAACGCTCTCCACGCACTTGGCTCCTCCTCGCCGGAGGAGGTCCGGCGGCGGATGTCGGAGATCGACAAGGACGGCAACGGCTTCATTTCCCTAGATGAACTGTGCGAGTTTCAGAGGGCTAATCCCGATTTGATGAAGGAGGTCTGCAGAAGGCTTTAG MAESEAIRAECERIFNRFDCNGDGKISLSELENALHALGSSSPEEVRRRMSEIDKDGNGFISLDELCEFQRANPDLMKEVCRRL Homology
BLAST of Cp4.1LG12g04870 vs. ExPASy Swiss-Prot
Match: Q84V36 (Polcalcin Che a 3 OS=Chenopodium album OX=3559 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 6.7e-19 Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy Swiss-Prot
Match: O82040 (Polcalcin Phl p 7 OS=Phleum pratense OX=15957 GN=P7 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.0e-18 Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy Swiss-Prot
Match: P58171 (Polcalcin Syr v 3 OS=Syringa vulgaris OX=34270 GN=SYRV3 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 2.6e-18 Identity = 45/74 (60.81%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy Swiss-Prot
Match: O81092 (Polcalcin Ole e 3 OS=Olea europaea OX=4146 GN=OLE3 PE=1 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.3e-18 Identity = 47/82 (57.32%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy Swiss-Prot
Match: P94092 (Polcalcin Cyn d 7 OS=Cynodon dactylon OX=28909 PE=1 SV=2) HSP 1 Score: 91.7 bits (226), Expect = 4.4e-18 Identity = 44/73 (60.27%), Postives = 54/73 (73.97%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. NCBI nr
Match: XP_023549323.1 (polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 173 bits (438), Expect = 2.16e-54 Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. NCBI nr
Match: XP_022929895.1 (polcalcin Phl p 7-like [Cucurbita moschata] >KAG6575329.1 hypothetical protein SDJN03_25968, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013869.1 hypothetical protein SDJN02_24038, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 171 bits (432), Expect = 1.78e-53 Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. NCBI nr
Match: XP_022992461.1 (polcalcin Phl p 7-like [Cucurbita maxima]) HSP 1 Score: 167 bits (424), Expect = 2.96e-52 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. NCBI nr
Match: XP_038886760.1 (polcalcin Phl p 7-like [Benincasa hispida]) HSP 1 Score: 151 bits (382), Expect = 7.61e-46 Identity = 73/84 (86.90%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. NCBI nr
Match: XP_022150429.1 (polcalcin Syr v 3-like [Momordica charantia]) HSP 1 Score: 145 bits (366), Expect = 2.10e-43 Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy TrEMBL
Match: A0A6J1EVJ6 (polcalcin Phl p 7-like OS=Cucurbita moschata OX=3662 GN=LOC111436362 PE=4 SV=1) HSP 1 Score: 171 bits (432), Expect = 8.63e-54 Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy TrEMBL
Match: A0A6J1JTM0 (polcalcin Phl p 7-like OS=Cucurbita maxima OX=3661 GN=LOC111488757 PE=4 SV=1) HSP 1 Score: 167 bits (424), Expect = 1.44e-52 Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy TrEMBL
Match: A0A0A0KAW9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G041150 PE=4 SV=1) HSP 1 Score: 146 bits (369), Expect = 3.55e-44 Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy TrEMBL
Match: A0A6J1DA15 (polcalcin Syr v 3-like OS=Momordica charantia OX=3673 GN=LOC111018587 PE=4 SV=1) HSP 1 Score: 145 bits (366), Expect = 1.02e-43 Identity = 70/84 (83.33%), Postives = 78/84 (92.86%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. ExPASy TrEMBL
Match: A0A5A7V7E6 (Polcalcin Syr v 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1213G00200 PE=4 SV=1) HSP 1 Score: 143 bits (361), Expect = 5.72e-43 Identity = 70/84 (83.33%), Postives = 77/84 (91.67%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. TAIR 10
Match: AT3G03430.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 83.6 bits (205), Expect = 8.4e-17 Identity = 40/75 (53.33%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. TAIR 10
Match: AT5G17480.1 (pollen calcium-binding protein 1 ) HSP 1 Score: 83.6 bits (205), Expect = 8.4e-17 Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. TAIR 10
Match: AT5G37770.1 (EF hand calcium-binding protein family ) HSP 1 Score: 62.8 bits (151), Expect = 1.5e-10 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. TAIR 10
Match: AT1G66400.1 (calmodulin like 23 ) HSP 1 Score: 60.5 bits (145), Expect = 7.7e-10 Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
BLAST of Cp4.1LG12g04870 vs. TAIR 10
Match: AT1G73630.1 (EF hand calcium-binding protein family ) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-09 Identity = 29/65 (44.62%), Postives = 46/65 (70.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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