Cp4.1LG12g04600 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g04600
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	BEST Arabidopsis thaliana protein match is: reduced male fertility .
Location	Cp4.1LG12: 4320596 .. 4324788 (+)
RNA-Seq Expression	Cp4.1LG12g04600
Synteny	Cp4.1LG12g04600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTTCGTTCTCTTCCTCTTTCTGTCTCCATCCTGATAGACGCTGTTCGTAGGTAATTTCAGTTCTGATACGAGTTTCGCGCGTAGAAATGTGTCTGCCTGTGGAGGTAAATGCCTATGTGTTTTTTAGCATCGTGATAGTGAGGAAATTAAAATTTTATTTTCTAGAAGTGATTTGAATATCTTAGTTCAGAAATTTAAATGTGAAGTTATTTCCCGACTTTTAGACTCTTTGAGCTAGATTGTGAAGTTGCATTAGTTTAGTACTGCCAAGGACTTGGAAGTAGTAAGAAATAAACAATTCGAGTTGTTTCTGTAAGATTCCGAAGCTCAAAGTGAACGTCTGCAGAGTTAAATCTACTCAGCATAAACTTGTTCGTTTTCTCCATCGGGAGAAAACGATGGAGAAGAAACGTTTATTTTTGTGATTTTAGAATTTGCAGACTGAATGTGACAATCGTTGTTGGAAACCACTAGGCGTTGATGAACACTTTCTGGAGCTCTATAAAGTTAATCGTAAGTACAGTTAGTAATATAAGTAGGATGCCAAATCTTCAGTATAGTTTGAAGTGATTTTTTTCACAAGGATCGAAGCAGTTACAGGACTTACATTTTTTACTTTTTTTATCTAAACACTTTCTGGAGCTCTATCTAAAGCTTGTTCAACACTAACATACTTTTTTATCACATAAAGTATTCCGAGTCTCCTAGTTTTCTTATTAACTTCATCTTTTACTTTTCTATGTATTGTTTCTTGGTTCTACTTATAAGATTTCAAACGTGATTGTTCTATCTTTTTACATATTCAATTTTAAACCAGTTATTATTTTCAGTTTTAAGTAATCGGAAGTTCATTTGTTACCATTAGTCTGGCTTAAGTTTGGTAGATCGGGAATAAGATTGATGAATCACGTGAATTAGAAACTGTTTCTATCAGTTTGAATATTTCATCGGAAACAGAGCTAAGGATTAATATGTAATTTAACCTTCCGTATGACAATTTCCGCGAATGAACATGAAAGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGGTAAGGATCGGATTCGAGTTCTTTGAGTTATGTATTCCTGCTCTGGTCAATACGTATTGCGTTTGCTTAACTATTCAATGATCTCTGGTCCAGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGGTGAGTGATTGTGATTCCACTCGACTCCTGTAAGTAATTAGGCGCGGATTGTACTTAAAAGTAAAACTATATGTCAAGGACCTGCTTAGCCACGGGTTCTATCTAATCTTATCATCACATCTTACCTAATAACTAGATATTCAAGCTTTATTCAACCATAACTCAAGTCATTATAGAGGGTGGAGGTAGTATAAACCTACTATCTCGAGATTCCAAGGAATAAACTCCCAAAGCAACTGTACTGCTACTTTCCATCATGTATAAAATAGACATTTAGTGATCCTGATTCCAATATACTAATTGAACTGTAGTTAGCTTCTTTACCACATTGTTTATTATTTATTTATTTATTTTAAATGAAATCAGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGGTATCAAGCTTGCTAAATGTTTTTATCATTTTCTTTCAATGGTTGTCATAACTTGATACTCTATTAACCTTTTCTTAAGTGAATTATATTCTAAATGGACTAATGTGACAGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGTAGGTATCCCTAGTAACCATTCTGTATCCCACTAAAATGTAGGAACCTCTTTTTATTTCGATTGTTGCAAGATCTTAGCCTGCAGTTGTATCATTTTGGTAATTGGTATGCCATACTGTGTTTAAAAATATTGGGGAATTCATAGGCTTATTTTCTTCCGAATTTCATTGAAAATTAGTTTAATCTTGTTTCCAATACCTTAGGAAAGTGGAAGATACTGGGAGCACATACTCCTAATCAGCTGCTAATCAACCTTAGTTCAGTTTTTTTAGTAAGGGTTTTAACACATCCAAACAAAAATTCATTCTACACGCATCGTCCAGAACCTAACCTGAAAATAGAATTTGTATTTCAAAATTGTAAGCAGTGGATGTATAGCTTCAGAAAGTTATCTACAATTTATTGGCTTTTGCTGATCTTGCTACTACTATTATGTAGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGTATAGCACAGTCTTTCTATACTGAAATATTACCGTCTTATTATTATTGCTAGGTGCTTCTGAAAATGATTCCTGTAACATCTTTCCTACTCCTAAGTTTAATTATTTAGGATCTGTCCAGGAAAAGTAATTTTAATATAATACTAGATTACTCGTGAAATTCTTGAATTATTTATCCTTTTTGAAGAAAGTACTGCGCACTGCGCAAATTATATGCCATGGAAGGATGCTTTTTTTCTTTCTTTATCTAAAAATTATACTCGTATAGTGCAACCTGTTTCAGCATTTGCTTAGAAGATACTAAATTTCTATATTTAGGCTACGCCTAATGATTTAACATGTTACAAATACAACACAAGATCTGAGTTCAAATTATTGCAACATCCGTTAAGTTTGTAGACGTTGAATGTTGTTATATGACATACTTCTACGTCCAGAAAATATTGAGTTACTTCAGGAGATTCAATTATGAAAATTTATGGTGAAATTTGTCCCAAATGAATTGACAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGTAAATCGCCTCCAGTTTTATATGATATTTTAATTGGTGAGAAGTACTTTTCATTGTTTTAAAAGCATTTTCTAGAATTTTCAGTCTTTAGTCGACTCGATAGAAAGACCTTTACAAGTAATTAATTAGCATTATGCTAAATATGCATGTAGAAAAAGTTTTTTACTTCAAAATACTTGAAATAAGTGATTTTACCTCAATCATCTTGGTTAAACATGTAGATCACCGCGAAATGGGTGAGCTTCAATCGAAAGAGAAAAGTACTTTTAATCGATATGAAAAAAATTGTTATTAGCGACATGGAAAGCATTCCTAACTTGTCAATGCCTCCCTTAGTTGGTAACATTGGCGTAGTCTAGTGTTTGATTGAGAATGAGGTGTGATTTTGTAATGACGCATGCAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTAACCCCCTGGAGGTCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGAAGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGGAAGTGTAACCTTTCGTTAACAAGTTATGTTTAAAAACAGTTCT

mRNA sequence

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAGTTCCTTCTTCAAATGCCCTTCTTTTATTATTCCTTCTTGTAACCCCCTGGAGGTCAACCCCAACCTTTCTCTACTCACTATACTTTGCGCCAAAGAAGTGTAATTCCCCAACAAAACAAATCACCAATTTCTATAAATACTTTTCCAGAGGAAGTGTAACCTTTCGTTAACAAGTTATGTTTAAAAACAGTTCT

Coding sequence (CDS)

ATGGGGAAGAAACTTAGCATTGCCTCTGCGCGAGATCGAGTGGTTACGAGATCTCAATCCATTGCCATGGAGCGTGAGAAAATATCATCATCGCCAAATCCAGTTGTTGCTGTAGAGCCGGAAGGAATGGTAAAGCGAATGCGAAGAGATATTAAGCCGATTCATTCTTGCAGCTCTCCTCGTTCCACTTTTCTTACTGCTCATTCTTCTGCTTCATCCTCTGCATCTTCGTCTGCCTGCTGGTATGACGCGGACGTGTGGACAGAGGTGGCGAAGTTTCTGGATGGAAGATCTTTGATGATGCTTGCGGCGACTAGCCGGTGGTTTTACCGTTTAGTCATGGAAGACAGCATATGGAAGTATGTTTGCCTGCGTGATCTTCAGGTCCCTGCTCCTCAACACACGGCCTTCAAATGGATCAAGCTCTACGTTTCTGCCTTCGATGGAAGTCACTCTTACATTTTCCGGCAGCAGGAGAAACATCTCGATTGGATGCGGATTGGGGCTTTTTTCATGGATTCTTCCGTAGTACTCCTATCAGAACGGCTGGGCTCTCAAGTGAAAATTCCAAAACAGGATTCAACGGATAATACATTGGAGTCCGGTTGTTGTGTCTTGCACAATGTTAAAACTGGGATCTGGATAGCCGATCTACAACTTGTTCGTTGTCCCGTTTGCGACCTGAATACATGTGATGGAACAATGCAAACGTTGGATGCCAGGCACATAGAGCTGTTCCTGAACGAAGGTTACCAAGATGGTAGTTGGGAATATCAGATTTTAGGTTCTCATGATATCAGGAAGCCTACAGAGTCAGCTTCAGGGGCCATTTTTGATGTAAAGCATTTGAAAGACTCTTCAACCTCAGGAATATTGGATCTAAAGTCATGGACAGGCAGTCGAACTGATTGGCAGCCAAAGGCAATGATTACTCTCAACGCAGTTGCCGTAAATACCTATTTACAAGACAATGAAGGAGTTCACGTGAAATACCAGGCCATGAAAGCCGGAGCAAACGGAGAGGTGGTTTCTATCAGAATCTCTCAGCAGCTACTTTAG

Protein sequence

MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL

Homology

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BLAST of Cp4.1LG12g04600 vs. ExPASy Swiss-Prot
Match: Q9M365 (Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=2)

HSP 1 Score: 393.3 bits (1009), Expect = 2.9e-108
Identity = 187/343 (54.52%), Postives = 255/343 (74.34%), Query Frame = 0


Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   ++  + ++ I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIV----QSSDQKNGKILRGIRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH+DWMRIGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKHIDWMRIGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSTDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE 250
           ++ + +  L+ SG C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 359

[Close]

BLAST of Cp4.1LG12g04600 vs. ExPASy Swiss-Prot
Match: Q9FGB8 (Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE=2 SV=2)

HSP 1 Score: 384.0 bits (985), Expect = 1.8e-105
Identity = 175/303 (57.76%), Postives = 233/303 (76.90%), Query Frame = 0


Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSTDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLN 230
            +DS    L+E L  ++K+P + + +  L+ SG C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 TCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 350
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 351 QLL 353
           QLL
Sbjct: 361 QLL 355

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BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: XP_023548391.1 (probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 708 bits (1827), Expect = 2.57e-257
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60
           MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60

Query: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120
           RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK
Sbjct: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120

Query: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180
           YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS
Sbjct: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180

Query: 181 ERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDA 240
           ERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDA
Sbjct: 181 ERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDA 240

Query: 241 RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS 300
           RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
Sbjct: 241 RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS 300

Query: 301 RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 301 RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352

[Close]

BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: XP_038875515.1 (probable F-box protein At3g61730 [Benincasa hispida])

HSP 1 Score: 679 bits (1753), Expect = 5.29e-246
Identity = 339/354 (95.76%), Postives = 344/354 (97.18%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSPNPVVAVEPEGMVKRMRRDIKPIHSCS 60
           MGKKLSIASARDRVVTRS SIAMER K+S  SSPN VVA EPEG VKRMRRDIKPIHSCS
Sbjct: 1   MGKKLSIASARDRVVTRSLSIAMERAKMSKRSSPNSVVAAEPEGTVKRMRRDIKPIHSCS 60

Query: 61  SPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120
           SPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI
Sbjct: 61  SPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSI 120

Query: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVL 180
           WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFF+DSSV L
Sbjct: 121 WKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFLDSSVAL 180

Query: 181 LSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240
           LSERLGSQ+KIPKQDSTD TLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL
Sbjct: 181 LSERLGSQMKIPKQDSTDKTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTL 240

Query: 241 DARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300
           DARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT
Sbjct: 241 DARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWT 300

Query: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 301 GSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 354

[Close]

BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: XP_004140675.1 (probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical protein Csa_005078 [Cucumis sativus])

HSP 1 Score: 674 bits (1739), Expect = 7.47e-244
Identity = 334/355 (94.08%), Postives = 344/355 (96.90%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: TYK24589.1 (putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 664 bits (1714), Expect = 5.01e-240
Identity = 332/356 (93.26%), Postives = 342/356 (96.07%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 VLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
            LLSERLGSQ+K+PKQ ST NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Cp4.1LG12g04600 vs. NCBI nr
Match: KAG6575300.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 655 bits (1690), Expect = 1.08e-236
Identity = 333/352 (94.60%), Postives = 334/352 (94.89%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60
           MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP
Sbjct: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSP 60

Query: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120
           RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK
Sbjct: 61  RSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWK 120

Query: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180
           YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS
Sbjct: 121 YVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLS 180

Query: 181 ERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDA 240
           ERLGSQVKIPKQDS DNTLESGCC+L NVKTGIWIA                GTMQTLDA
Sbjct: 181 ERLGSQVKIPKQDSMDNTLESGCCILRNVKTGIWIA----------------GTMQTLDA 240

Query: 241 RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS 300
           RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS
Sbjct: 241 RHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGS 300

Query: 301 RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 301 RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 336

[Close]

BLAST of Cp4.1LG12g04600 vs. ExPASy TrEMBL
Match: A0A0A0KD88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1)

HSP 1 Score: 674 bits (1739), Expect = 3.62e-244
Identity = 334/355 (94.08%), Postives = 344/355 (96.90%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKI---SSSPNPVVAVEPEGMVKRMRRDIKPIHSC 60
           MGKKLSIASARDRVVTRSQSI+MER K+   SS  NPVVA EPEGMVKRMRRDIKPIHSC
Sbjct: 1   MGKKLSIASARDRVVTRSQSISMERAKMTKRSSPKNPVVAAEPEGMVKRMRRDIKPIHSC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYR VMEDS
Sbjct: 61  SSPRSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRSVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV 
Sbjct: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQ+KIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQMKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSG+LDLKSW
Sbjct: 241 LDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGLLDLKSW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           TG+RTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TGNRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 355

[Close]

BLAST of Cp4.1LG12g04600 vs. ExPASy TrEMBL
Match: A0A5D3DMQ8 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001350 PE=4 SV=1)

HSP 1 Score: 664 bits (1714), Expect = 2.43e-240
Identity = 332/356 (93.26%), Postives = 342/356 (96.07%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHS 60
           M KKLSIASARDRVVTRSQSI+MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHS
Sbjct: 1   MAKKLSIASARDRVVTRSQSISMERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHS 60

Query: 61  CSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120
           CSSP S FLTAHSSASSSASSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED
Sbjct: 61  CSSPHSAFLTAHSSASSSASSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMED 120

Query: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSV 180
           SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV
Sbjct: 121 SIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSV 180

Query: 181 VLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240
            LLSERLGSQ+K+PKQ ST NTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ
Sbjct: 181 ALLSERLGSQMKVPKQGSTANTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQ 240

Query: 241 TLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKS 300
           TLDARHIELFLNEGYQDGSWEYQI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKS
Sbjct: 241 TLDARHIELFLNEGYQDGSWEYQIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKS 300

Query: 301 WTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           WTGSR DWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 WTGSRADWQPKAMITLSAVAVNTYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 356

[Close]

BLAST of Cp4.1LG12g04600 vs. ExPASy TrEMBL
Match: A0A1S3CBL0 (probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV=1)

HSP 1 Score: 630 bits (1625), Expect = 3.90e-227
Identity = 312/334 (93.41%), Postives = 321/334 (96.11%), Query Frame = 0


Query: 23  MEREKIS--SSP--NPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSSASSSASSS 82
           MER K+S  SSP  NPVVA EPEGMVKRMRRDIKPIHSCSSP S FLTAHSSASSSASSS
Sbjct: 1   MERAKMSKRSSPKNNPVVAAEPEGMVKRMRRDIKPIHSCSSPHSAFLTAHSSASSSASSS 60

Query: 83  ACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 142
           +CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK
Sbjct: 61  SCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFK 120

Query: 143 WIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNT 202
           WIKLYVSAFDGSHSYIFRQ EKHLDWMRIGAFF+DSSV LLSERLGSQ+K+PKQ ST NT
Sbjct: 121 WIKLYVSAFDGSHSYIFRQPEKHLDWMRIGAFFLDSSVALLSERLGSQMKVPKQGSTANT 180

Query: 203 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 262
           LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY
Sbjct: 181 LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEY 240

Query: 263 QILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVN 322
           QI+GSHDIRKPTESASGAIFDVKHL+DSSTSGILDLKSWTGSR DWQPKAMITL+AVAVN
Sbjct: 241 QIVGSHDIRKPTESASGAIFDVKHLEDSSTSGILDLKSWTGSRADWQPKAMITLSAVAVN 300

Query: 323 TYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           TYLQDNEGVHVKYQAM+AGANGEVVSIRISQQLL
Sbjct: 301 TYLQDNEGVHVKYQAMRAGANGEVVSIRISQQLL 334

[Close]

BLAST of Cp4.1LG12g04600 vs. ExPASy TrEMBL
Match: A0A6J1DCT6 (probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 PE=4 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 2.17e-220
Identity = 308/355 (86.76%), Postives = 326/355 (91.83%), Query Frame = 0


Query: 1   MGKKLSIASARDRVVTRSQSIAMEREKISSSPNPVVAVEPEG-MVKRMRRDIKP--IHSC 60
           MGKKLSI+SARDRVVTRSQS AMERE++S   +P+ A EPEG M KR+RRD+K   IH C
Sbjct: 1   MGKKLSISSARDRVVTRSQSSAMERERLSKR-SPIAAAEPEGVMAKRIRRDVKHPIIHPC 60

Query: 61  SSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120
           SSPRS FLTA        SSS+CWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS
Sbjct: 61  SSPRSAFLTA--------SSSSCWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDS 120

Query: 121 IWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVV 180
           IWKYVCLRDLQV APQ TAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF MDSSV 
Sbjct: 121 IWKYVCLRDLQVSAPQITAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFSMDSSVA 180

Query: 181 LLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240
           LLSERLGSQVKIPKQDS DN LESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT
Sbjct: 181 LLSERLGSQVKIPKQDSKDNMLESGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQT 240

Query: 241 LDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSW 300
           LDARHIELFLNEGYQDGSW+YQI+GSHDIRKPTE+ASGAIFDVKHL+DSSTSGILD+++W
Sbjct: 241 LDARHIELFLNEGYQDGSWDYQIVGSHDIRKPTEAASGAIFDVKHLEDSSTSGILDMQTW 300

Query: 301 TGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           +G RTDWQPKAMITL+AVAVNTYLQDNEGVHVKYQAM+ GANGEVVSIRISQQLL
Sbjct: 301 SGKRTDWQPKAMITLHAVAVNTYLQDNEGVHVKYQAMRGGANGEVVSIRISQQLL 346

[Close]

BLAST of Cp4.1LG12g04600 vs. ExPASy TrEMBL
Match: A0A6J1EVC3 (probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 PE=4 SV=1)

HSP 1 Score: 558 bits (1437), Expect = 2.41e-199
Identity = 270/271 (99.63%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 82  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 141
           YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK
Sbjct: 11  YDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVPAPQHTAFKWIK 70

Query: 142 LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLES 201
           LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDS DNTLES
Sbjct: 71  LYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSMDNTLES 130

Query: 202 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 261
           GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL
Sbjct: 131 GCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQIL 190

Query: 262 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 321
           GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL
Sbjct: 191 GSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYL 250

Query: 322 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 352
           QDNEGVHVKYQAMKAGANGEVVSIRISQQLL
Sbjct: 251 QDNEGVHVKYQAMKAGANGEVVSIRISQQLL 281

[Close]

BLAST of Cp4.1LG12g04600 vs. TAIR 10
Match: AT5G36000.1 (BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-106
Identity = 175/303 (57.76%), Postives = 233/303 (76.90%), Query Frame = 0


Query: 51  IKPIHSCSSPRSTFLTAHSSASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFY 110
           ++ IH C SPR +  T  S  S        WY+ D+WT + +FLDG+SL+ L AT++WFY
Sbjct: 61  LRGIHGCVSPRCSAPTYQSRFS--------WYEQDIWTYITRFLDGKSLVKLGATNKWFY 120

Query: 111 RLVMEDSIWKYVCLRDLQVPAPQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAF 170
           ++ MED++W++ CLRDLQVP     +  WIK+Y SAFDGSHSY+F Q+EKH+DWMR+GAF
Sbjct: 121 KIAMEDTVWRFACLRDLQVPETFPVSSTWIKIYASAFDGSHSYLFHQKEKHIDWMRLGAF 180

Query: 171 FMDSSVVLLSERLGSQVKIPKQDSTDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLN 230
            +DS    L+E L  ++K+P + + +  L+ SG C+++++K+GIWIADLQL+RCP+CDL+
Sbjct: 181 VLDSRTSFLTESLSGRLKVPTEGTIEQMLQSSGSCLINDIKSGIWIADLQLLRCPLCDLS 240

Query: 231 TCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTS 290
           TCDGTMQTLD RHIELFL+EGY+DGSW+Y ++GSH + K   +A GAIFD+KHLK SS+S
Sbjct: 241 TCDGTMQTLDVRHIELFLSEGYKDGSWDYNLIGSHKLEKDASAACGAIFDLKHLKKSSSS 300

Query: 291 GILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQ 350
           GIL+LKSWTG   D QPKA+I  +AVAV+T LQ NEG+ VKY  MKAG +G++VSIRISQ
Sbjct: 301 GILNLKSWTGEADDSQPKAVIAPHAVAVHTRLQQNEGILVKYHTMKAGTDGDIVSIRISQ 355

Query: 351 QLL 353
           QLL
Sbjct: 361 QLL 355

[Close]

BLAST of Cp4.1LG12g04600 vs. TAIR 10
Match: AT3G61730.1 (reduced male fertility )

HSP 1 Score: 375.9 bits (964), Expect = 3.5e-104
Identity = 183/343 (53.35%), Postives = 250/343 (72.89%), Query Frame = 0


Query: 11  RDRVVTRSQSIAMEREKISSSPNPVVAVEPEGMVKRMRRDIKPIHSCSSPRSTFLTAHSS 70
           R  V +  Q   ++RE+   +   +V    +   ++  + ++ I  C SPR +  T  S 
Sbjct: 29  RKLVQSNEQKNDIQREEDGRAKRRIV----QSSDQKNGKILRGIRGCVSPRCSAQTYQSR 88

Query: 71  ASSSASSSACWYDADVWTEVAKFLDGRSLMMLAATSRWFYRLVMEDSIWKYVCLRDLQVP 130
            S        WY+ D+WT +++FLDG+SL+ L AT++WFY++ MED++W++ CLRDLQVP
Sbjct: 89  FS--------WYEQDIWTYISRFLDGKSLVKLGATNKWFYKIAMEDTVWRFACLRDLQVP 148

Query: 131 APQHTAFKWIKLYVSAFDGSHSYIFRQQEKHLDWMRIGAFFMDSSVVLLSERLGSQVKIP 190
            P   +  WIK+Y SAFDGSHSY+FRQ+EKH     IGAF +DS   LL+E L  ++K P
Sbjct: 149 VPFPVSSTWIKIYASAFDGSHSYLFRQKEKH-----IGAFVLDSRTSLLTESLSGRLKFP 208

Query: 191 KQDSTDNTLE-SGCCVLHNVKTGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLNE 250
           ++ + +  L+ SG C+++++K+GIWIADLQLVRCPVCDL+TCDGTMQTLDARHIELFL+E
Sbjct: 209 REGTIERMLQSSGSCLINDIKSGIWIADLQLVRCPVCDLSTCDGTMQTLDARHIELFLSE 268

Query: 251 GYQDGSWEYQILGSHDIRKPTESASGAIFDVKHLKDSSTSGILDLKSWTGSRTDWQPKAM 310
           GY+DGSW+Y ++GSH ++K   +A GAIFD+KHLK+SS SGIL+LKSWTG   D QPKA+
Sbjct: 269 GYKDGSWDYNLIGSHKLQKNASAACGAIFDLKHLKESSYSGILNLKSWTGESNDSQPKAV 328

Query: 311 ITLNAVAVNTYLQDNEGVHVKYQAMKAGANGEVVSIRISQQLL 353
           I  +AVAV+T LQ+NEG+ VKY  MKAG +G++VSIRISQQLL
Sbjct: 329 IAPHAVAVHTRLQENEGILVKYHTMKAGTDGDIVSIRISQQLL 354

[Close]

BLAST of Cp4.1LG12g04600 vs. TAIR 10
Match: AT3G62500.1 (BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G61740.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 165.2 bits (417), Expect = 9.3e-41
Identity = 87/168 (51.79%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 163 DWMRIGAFFMDSSVVLLSERLGSQVKIPKQDSTDNTLESGCCVLHNVKTGIWIADLQLVR 222
           DWM IGAF +DS   LL+E L  ++K+PK+ + +  L+                 LQLVR
Sbjct: 178 DWMPIGAFVLDSRTSLLTESLSGRLKVPKEGTIERMLQK---------------YLQLVR 237

Query: 223 CPVCDLNTCDGTMQTLDARHIELFLNEGYQDGSWEYQILGSHDIRKPTESASGAIFDVKH 282
            PVCDL     TMQTLDARHIELFL+EGY+DGSW+Y ++GSH ++K   +A GAIFD+KH
Sbjct: 238 -PVCDLR----TMQTLDARHIELFLSEGYKDGSWDYNLIGSHKLQKNASAACGAIFDLKH 297

Query: 283 LKDSSTSGILDLKSWTGSRTDWQPKAMITLNAVAVNTYLQDNEGVHVK 331
            K+SS+SGIL+LKSWTG     QPKA+I  +AVAV+T L++NE   ++
Sbjct: 298 HKESSSSGILNLKSWTGQPDISQPKAVIAPHAVAVHTRLRENEVAEIQ 325

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M365	2.9e-108	54.52	Probable F-box protein At3g61730 OS=Arabidopsis thaliana OX=3702 GN=RMF PE=1 SV=...	[more]
Q9FGB8	1.8e-105	57.76	Probable F-box protein At5g36000 OS=Arabidopsis thaliana OX=3702 GN=At5g36000 PE...	[more]

BLAST of Cp4.1LG12g04600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548391.1	2.57e-257	100.00	probable F-box protein At3g61730 [Cucurbita pepo subsp. pepo]	[more]
XP_038875515.1	5.29e-246	95.76	probable F-box protein At3g61730 [Benincasa hispida]	[more]
XP_004140675.1	7.47e-244	94.08	probable F-box protein At3g61730 [Cucumis sativus] >KGN46347.1 hypothetical prot...	[more]
TYK24589.1	5.01e-240	93.26	putative F-box protein [Cucumis melo var. makuwa]	[more]
KAG6575300.1	1.08e-236	94.60	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG12g04600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD88	3.62e-244	94.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G087760 PE=4 SV=1	[more]
A0A5D3DMQ8	2.43e-240	93.26	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3CBL0	3.90e-227	93.41	probable F-box protein At3g61730 OS=Cucumis melo OX=3656 GN=LOC103498945 PE=4 SV...	[more]
A0A6J1DCT6	2.17e-220	86.76	probable F-box protein At3g61730 OS=Momordica charantia OX=3673 GN=LOC111019845 ...	[more]
A0A6J1EVC3	2.41e-199	99.63	probable F-box protein At3g61730 OS=Cucurbita moschata OX=3662 GN=LOC111436308 P...	[more]

BLAST of Cp4.1LG12g04600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36000.1	1.3e-106	57.76	BEST Arabidopsis thaliana protein match is: reduced male fertility (TAIR:AT3G617...	[more]
AT3G61730.1	3.5e-104	53.35	reduced male fertility	[more]
AT3G62500.1	9.3e-41	51.79	BEST Arabidopsis thaliana protein match is: SET domain protein 14 (TAIR:AT3G6174...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 81..162 e-value: 4.5E-6 score: 28.5
None	No IPR available	PANTHER	PTHR47149	F-BOX PROTEIN RMF	coord: 22..352
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 85..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04600.1	Cp4.1LG12g04600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061458	reproductive system development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding