Cp4.1LG12g04290 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTCTTCATACTAGACCAAACCCATGAGCTAGCCGAAGCACTGTACGTAATCGCCAGCGTTACTGACATAGCCTATCTCAAATTCTCAATGGAAAAAATGTCCATAATGGGCAGTGCCTCACCAGAAACTGATTGCATCATAGCAATACAACTCTGCCCTCCATACTTCCAAAATTATACCTGCAACCATCTTCATTATTCATGGATTAACATCCACAAAATCTTCCCTCTCATGTCCGATCTCAACCGAGCCGGCTTCTCTTCCTTGTCCTTCTCTTTTACAGCCCCGAATCTTGCCAACCTCGTATTCGAGGGCCCATCCCGTTTACGTGAAGCCGATTTCGAGTTAAATCCGACCAATGGTTCGAGGGATATCGGGCCATATGACTACTCAACTTTTGTCACCTTGGAATCAAAAGAGTTCATAAACATAATCACAGACTTTGAATTTTATCGTTATGGTAATACCCCCTTTAATCAAAAGATACACATTTTATGTTGCTAACATGTTCTTGAATTTCTTCATGTTTGTGGCAGTTCTTGTTACTCTCACGAGCTCGCAAGTCAAATTCTCGTACACGAGGTTTCAGACTATTATTACTCGTGAGGTATTATTATTTGTTGAGGATTGTTAGGAAATGATCATGGGTTTACAAGTCGTTATTAAAATTTGGAATTTATTGCATGTAGAGTGGCCGATGCGTTATTGGAGGTATTGAAGAATCGGGTTTGATTAAATATATAATCACTCTTCATCCAATGCATACTTTCTGCAATTTGGTTCGTCAAACTGAAAGGGTATGGCTATTCAAGTCCGATGAAGCTGCCAAAGGTGTAATTGCTGCCCCTCTAGGACTGCATGCTCGATTTGTGACCTATTTTCCTGATGATTGGAAAGAATGAAATGGGAAAGTTTGTGTAGCCTTACAAAACTATGATCAAATGCCATTTCTTGACATTCTTTTTTTTTTTTTAATTGTTCTACTCTTGAATTTGTTATAATCACGTGTTTCAACGTTGATCAATTCGGAAAATGAATCATCGAATGGAGATAGTATTACTTCGATGATCTTTTTCTTGATATGGGACTACTCTTAATAATTCTGAACCGTCAGTGCCATATAGCCACTGCTAGGATTGAGTTTTCTTTCTAAAAATTTGACATGAATACTTTGATTCTCTAAGTAAGTTGGTTTTGAGTTATTGTTTCAGTACCCTAGTTCTCTTGTTTCGATCAAGATAAT ATGTTCTTCTTCATACTAGACCAAACCCATGAGCTAGCCGAAGCACTGTACGTAATCGCCAGCGTTACTGACATAGCCTATCTCAAATTCTCAATGGAAAAAATGTCCATAATGGGCAGTGCCTCACCAGAAACTGATTGCATCATAGCAATACAACTCTGCCCTCCATACTTCCAAAATTATACCTGCAACCATCTTCATTATTCATGGATTAACATCCACAAAATCTTCCCTCTCATGTCCGATCTCAACCGAGCCGGCTTCTCTTCCTTGTCCTTCTCTTTTACAGCCCCGAATCTTGCCAACCTCAGTGGCCGATGCGTTATTGGAGGTATTGAAGAATCGGGTTTGATTAAATATATAATCACTCTTCATCCAATGCATACTTTCTGCAATTTGGTTCGTCAAACTGAAAGGGTATGGCTATTCAAGTCCGATGAAGCTGCCAAAGGTGTAATTGCTGCCCCTCTAGGACTGCATGCTCGATTTGTGACCTATTTTCCTGATGATTGGAAAGAATGAAATGGGAAAGTTTGTGTAGCCTTACAAAACTATGATCAAATGCCATTTCTTGACATTCTTTTTTTTTTTTTAATTGTTCTACTCTTGAATTTGTTATAATCACGTGTTTCAACGTTGATCAATTCGGAAAATGAATCATCGAATGGAGATAGTATTACTTCGATGATCTTTTTCTTGATATGGGACTACTCTTAATAATTCTGAACCGTCAGTGCCATATAGCCACTGCTAGGATTGAGTTTTCTTTCTAAAAATTTGACATGAATACTTTGATTCTCTAAGTAAGTTGGTTTTGAGTTATTGTTTCAGTACCCTAGTTCTCTTGTTTCGATCAAGATAAT ATGTTCTTCTTCATACTAGACCAAACCCATGAGCTAGCCGAAGCACTGTACGTAATCGCCAGCGTTACTGACATAGCCTATCTCAAATTCTCAATGGAAAAAATGTCCATAATGGGCAGTGCCTCACCAGAAACTGATTGCATCATAGCAATACAACTCTGCCCTCCATACTTCCAAAATTATACCTGCAACCATCTTCATTATTCATGGATTAACATCCACAAAATCTTCCCTCTCATGTCCGATCTCAACCGAGCCGGCTTCTCTTCCTTGTCCTTCTCTTTTACAGCCCCGAATCTTGCCAACCTCAGTGGCCGATGCGTTATTGGAGGTATTGAAGAATCGGGTTTGATTAAATATATAATCACTCTTCATCCAATGCATACTTTCTGCAATTTGGTTCGTCAAACTGAAAGGGTATGGCTATTCAAGTCCGATGAAGCTGCCAAAGGTGTAATTGCTGCCCCTCTAGGACTGCATGCTCGATTTGTGACCTATTTTCCTGATGATTGGAAAGAATGA MFFFILDQTHELAEALYVIASVTDIAYLKFSMEKMSIMGSASPETDCIIAIQLCPPYFQNYTCNHLHYSWINIHKIFPLMSDLNRAGFSSLSFSFTAPNLANLSGRCVIGGIEESGLIKYIITLHPMHTFCNLVRQTERVWLFKSDEAAKGVIAAPLGLHARFVTYFPDDWKE Homology
BLAST of Cp4.1LG12g04290 vs. NCBI nr
Match: KAG6575236.1 (hypothetical protein SDJN03_25875, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 314 bits (804), Expect = 3.30e-106 Identity = 165/249 (66.27%), Postives = 170/249 (68.27%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. NCBI nr
Match: XP_023549461.1 (uncharacterized protein LOC111807815 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271 bits (693), Expect = 9.04e-90 Identity = 142/218 (65.14%), Postives = 142/218 (65.14%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. NCBI nr
Match: XP_023006661.1 (uncharacterized protein LOC111499319 [Cucurbita maxima]) HSP 1 Score: 256 bits (653), Expect = 9.97e-84 Identity = 133/215 (61.86%), Postives = 137/215 (63.72%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. NCBI nr
Match: XP_022959415.1 (uncharacterized protein LOC111460398 [Cucurbita moschata]) HSP 1 Score: 254 bits (650), Expect = 3.15e-83 Identity = 134/218 (61.47%), Postives = 137/218 (62.84%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. NCBI nr
Match: XP_023549342.1 (uncharacterized protein LOC111807724 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112 bits (279), Expect = 7.26e-27 Identity = 69/235 (29.36%), Postives = 99/235 (42.13%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. ExPASy TrEMBL
Match: A0A6J1KYD4 (uncharacterized protein LOC111499319 OS=Cucurbita maxima OX=3661 GN=LOC111499319 PE=4 SV=1) HSP 1 Score: 256 bits (653), Expect = 4.83e-84 Identity = 133/215 (61.86%), Postives = 137/215 (63.72%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. ExPASy TrEMBL
Match: A0A6J1H678 (uncharacterized protein LOC111460398 OS=Cucurbita moschata OX=3662 GN=LOC111460398 PE=4 SV=1) HSP 1 Score: 254 bits (650), Expect = 1.53e-83 Identity = 134/218 (61.47%), Postives = 137/218 (62.84%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. ExPASy TrEMBL
Match: A0A6J1KWL1 (uncharacterized protein LOC111498888 OS=Cucurbita maxima OX=3661 GN=LOC111498888 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 3.98e-27 Identity = 76/269 (28.25%), Postives = 107/269 (39.78%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. ExPASy TrEMBL
Match: A0A6J1H4N0 (uncharacterized protein LOC111460009 OS=Cucurbita moschata OX=3662 GN=LOC111460009 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 4.98e-27 Identity = 75/269 (27.88%), Postives = 104/269 (38.66%), Query Frame = 0
BLAST of Cp4.1LG12g04290 vs. ExPASy TrEMBL
Match: A0A6J1I815 (uncharacterized protein LOC111470836 OS=Cucurbita maxima OX=3661 GN=LOC111470836 PE=4 SV=1) HSP 1 Score: 105 bits (262), Expect = 1.45e-24 Identity = 71/251 (28.29%), Postives = 110/251 (43.82%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|