Cp4.1LG12g04230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g04230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Alanine-tRNA ligase
Location	Cp4.1LG12: 3148870 .. 3158799 (-)
RNA-Seq Expression	Cp4.1LG12g04230
Synteny	Cp4.1LG12g04230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGAGGAGACAGCCGGGGCTGCCAACATTTGAGAATATTGTTTTGCGAAGGGCTCAGCAGAAATACGCCAACGGGAGAACACTCTGTTGCAATGGCGATGGATGCTGGATCATCGTCCTCCCTAGAAAATCAATCTTTGCTTTCCAATCACCATGAATCTTCTCCAGGAAAACCTCAAGCATTGGAAGACTTGGCCAAGTCTTGGGCCGGCTACGCTGCCCAACAGGCGATGCTATACCAGCTCGCTATCAACCACTCCTTGGAGTCTGCCGTTGAAGCCTCCAAATCTCGCCTTGCTCAGATTCGTTCCACCTCCTATCCTCATTTCCAGAAGGCTATTGTAATTTCTCCAATTCTTTTTTTCCTGTTGTTGTTTCTTTAGTTTCCAATTGAGAATGGATGTTAGCTTATGTCCAGGAGAAAGAGGTTCAAAGGTTTTGAATCGTTACTGAGCGTTTTTTGATTGGAGTCAATTCGTACATCCACATTAGTTGATCGATGCTTGTTGTGTATAATTTGATTTCATGATATCTAATGTTTGAAATTACCGAACTCCAGACCTTGCCTGTTGATTGTCAATTAAGGCTCTCTTAAATTTTTTTGACCCAATTGTTGGGTTTGGAAATAAATGATCGCCTGCTTACATTTCTTAGTTCTGGTTTTGTTCTTTCTAGGTTCGGTTATGAAAATGGTTTTCTTGCCTCTTGCTAGAATTTTATTTTCTTGTCAGTTAGCTTTGTAATAGGGAGCTTTTATACAGTTTCTTGCAGCAGTTCTTTCCCCCAAGTATAAGGGAGGGTGGTCGAGTTGCAGGCTGTCTAAAAGTTGAAGTGGGACTAAGAAAAAGACCTGTTGATCTGTTTTGGTATTGGTTGCATGGGTAATGTTATGATGCAAACGTTTCTTTGTTTAATTGGTAAAGTCATTTTCATCTAGTGGATAGATTTAGACGCATTAAACAAATTATGTCACAACTTTGGAGGCAGACTATGGTTGGAAAGTTAAGCTTTTCAACAAATAGAACTTGTTCTCTTTTGTGAAGAAATAATTTTATTGGACATGTCAAATGGTTTTAGCAACCCTCTTCTATGTTTGAAGTTTGCACTTTTGGGGTTACATTTTGTCTATCTTCAACCCTCTGGCATGAACACTTTAGTGAGGGCTAAGTTGGGTTGAACTATGGGGGAAGTGTTCGAAAGGTAATGCATGGTACTTTTCCGGAAGCTATTAATGATGGATAAAGATTTTCCCCATCAAAGGATTCATGAAAAGTTTAAGTGCAGACTGATCAAAATTCTAGTTTTGAGGAAATAGCAAGAACTCTTCTGCGAAGAAAACAAACAGAACACCACATTCTTAATTTTTTAGCTAACTGGATGTTGTTGGGTTCGATGTTTATCTTTTTCAAGAAGGTTGGGCAGTAATATAGCATGCAAGATAGAATTGGTGGCAGATGAATGGACTGCTAGCTTTTGCATGTGGGATTGGTTAAAGCAGATAAACCACTTGCTAATTAACTCTTAGTTATATAGGAAAATTCCCAGTCCCATGAGCACTATTTTGTGATGTGGTGGGGTTCTTGTAAAAGAGAGTAATAACATTGCTAGATCTTTCTTGGGCTAGACGTATGACTTCATTGAAAGTTTTTGTTTCTCGTAATAAATAATTTCAAGTCATTTTATTTTCTTGCCAGAATAAATGATACACACTCTTTATAATGGTGACCTCAATTGATAGTACCTTGTTCATTCTCTGATTGCCTACTTTTGACTCTTCTGTTTTTGTTTTTCTTTTCTTTAACATTATTTTCTAAACTTATCATTTTATGCATTGAAAATATGCCTCTAGGATTCATTTCAAGATGTGAAGTCAGAGGTTGCTGATTTTGAGAATTTATTCTTTGGAAAAGTTAGAGGTTTGTTCCTCAGCTATCATTTTGATGGAAAATTGATTCTTAACTTACCTTACTTCTTTCTTTCTTTTTCTTTTTCTTTCTCATCAATTATGTAAATTACTGAGAAGTGTTATTTTTAATTTTTTCTGCAGATGGCATTCTTGTCGCTGCATCACATCCGCTGATCAGTTGTGGAGTTGCAACTGGCATGGGTTTGTTAGTCTTTAAAAGTATGACCTCATTTATTGATTAATTTTAATTATATGATAAGAGACTTTAAAAGTGAATTATAATTTCATAAATTCGTTTTTTTACTTCAAATACTTACTTTGTCCAATCATTTTCCCATATTTCATATCTCTCTCCCAGAATTAATTGCCTTCTAATGACACCAACCAAATTATTCAAGAATATTAGTAGTGATTTTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGCGCACATTATTCCACTACAATAAATTCACAGTTTAACTAGATTTGGAGGCTACTTATGTGGTCAGCACATGAAACTTGAAACAATCTGAATCTTGAGCATTTATTTTTCAACCATAGTTCTAATTTTCTGTTTGATCCTGCAGAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTCGTGAATGAAGAGGTGAGCAAATTTTTACTTATCACAATTACACACACAAAAAAAAAGGCTTAATAATTTGACCTCCAGGTAGAGGTTTTATGGTGGCTTACTTTTATTCAGATGTACTAGGGTCGTTGAAAATCCTTAGTTACTGGTCCCTTCTAAGTTTCCTAAAAGATGTTTTTAATTTGGCCGCACGTTCTCATAACAATTTTGATGCTGAAAAGGTTATCTGAGATCTCCTTTTGTAATAAATTTCCACCGTCTCTTTGGATTTTCCCATGGTTATTTGTGATTTAATGCTGGTTATCAACCCATATTTACTAACAATTATCGATTACTACATGGGGTTCTATTGTTGTGGAAATCTCCAAACCTGCTTCCTCATAATCTAATGTTCTTGTCTCCGAGTTTGCAAATGACAANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATCGTTAAAAGTTTAATTCAGCCAATTCGATGATGGACCATCAGTAGCTCTTACCTAACCATTCCATTTTTGTTGAAGGCTTTGAACCAGAAACAAAACTTTTCATTGAATAAATGAAAAGAGACTAATGCTCGTAGGATACAAACTTCCACAAGGGAGTGAACAAATAAACAGAAAAGATATATAAACAGTACAAAGAAGCACCTTGAAAAGAAAGAATAAAAAAGGAACAAACTTTGCGACAATCTTGAGACATGAACTAAACTGGGAACTTCGGAAAACCACCTAACGAAAGAGAGGAAGCTGAAAGATCCAGTGAGAATCTTACAAAGAAAAAGCCATTGAACCCGAACACAAAAGAAGCCCATTGAAATTGCACGAAAGACACCAAAAAACATAATAAAAACCGCCTTGAAAACACCCTGAGATGAAAATTACAGCAATCACAGAACAAGAAACAGCAAAAAAGACCATCTGGAGATAAGCTTGACTGAAGCCACCAAAGAAATCAATTGGCAACGAAGCTGAACTTTTCACAAAAACAGCAGGAAAAACAAAAATCATGGAAACTTGAAAGAAAACCACTAAAACAGGTCAGAAGAGTTTAAAGGGGCAAGGCTTTTCATTGTTTCCTTCTTTAACCAATAGGGGAATTTCACACATCCTGAGACCACAAACTAATAAGAGATGCAAGTTTAATAGGTATTGAGGATGAAGGAGGGAGATGATTATCTTTGTCACCGTCTTCAAATATAGAAGAAAAATCTTCCAAATAAGAATCTTCAAAAACATCATCTTGTAAGTTGCTATTCGAAGGATGCAAAGTCACTCCACACCCCTGCTAGTTTACGTCAGTATCAACTTCACGAGAGGGGAAAAGTATGGCCTTTTGATCACTCCTCTTGATAATGAAGAAACTGGATTCAAGGGGAGAAAATAACTTGGCTGCAAGGAATGGGGGAAGAAAAGTGAAGGGTCAAAAATTAAAAGGGCAACCTATTTCACTGAGTGGGCTAAAAAAACTTGAACAACTTTCTTCCATAAAATCTGGAGATATTGTTTTCCTTAAGAATTGGATGGCATGAAGAAATAGGTCTTTTTTTTTTTTTTTTTCGAGATTATGACAAGGATAGGCAGCAATCAAAATACTTATTCACTTCATGAACCTAGTCTTATTTGATATTCAAAAACTAACGTGAAATATTGGGGATTATGATGATTTTCATTTCTCTGATATTCTAGAGAATCTTTCCACTAAAAGGTTTCAAAAAGGGAAATACTTGCTTACAAGGGGCATGCCAAGATAATTGAGTTGAAAGCTTCCAACTGCAGCAAAGATTCCAGGTTTTCCTGAACTGTTTTGTGATGGTCAATAATAAAGTCTGGGAGAATAATTTTGGGTAACGTTGATCTTCATACCAGTTGCTAACTTGGAAATTATCACAATGCTAACGATCTCGTGAAGCTCATCATCATTTTAGTCATTAAAAAGTAAGATAGCTACGGTGGAATTTGTTTGATGGGAATTTGGAAATTTTAAATACCCTGTTGCTCAGGGTGTGAAATGTCTCTTTAGAAACCAGGCAGCAGCCTGCAGGTGTTCATTCACTAACATTAAGACAGAGGCTTCACCGTAGCAACTACATCCAACAATCTTGGACAAGATCACAAACTTTGGTCCACACCTTCCGAGTACGCTAATATCTGAACTGAGTTAATTCCTTAAGGCTAACCACTCTCTTATGCTTGGAACCACACGAACATGTTTCAGATTGACTCCAAGGCCATCACTCATGGGCTGGAAATTATTCTTTTCCACCAGTTAGGCCAAAACAGAGGAAGTTTGTGCTCAAGTGCAACTTGATCAACAGGAAGGCCCAATGCCTGGCTAATTGGTGCTAGGTTCATCACATAGGTGAAGAAGTACCTAGATTGGCGGCAAACATGATAGTAGTTAAGAAGAAGAACAAGAAATAGAGGCATACAGAGACTGACTCAAAGGTTAAGGTTGTGAACAACGCATGCCCCAAGGATTATTTTTCACTCTCATGGACACCTTAGGCTACCACTAGGTTTAATGCTTCCAATTGACCCAGAAAATATTGCATTTTGTCACGAAGACACTGAGTATTATTAATAAGTAATGCTCTTTGACCTGAAGAGTGGGAGGGCAACCTAGACTACCTAACCAAATCTCAAGGACCAATTTGACAAGACAATGGAGGTTCACTGATGACATTCTTGTCAAATTCTGTTGAGTCAAGGACTGCATTTAACATTTGAAATAGGCTGTTGACATTTTGAACACATGACCGAAGCTCAATTTGAGAAACTGTACATTAGGATCGTTTTCTGGCAGGTTCTTTGGATACATGGTCACCTAGATGAATTCTGAAGCAAGCCTCACCTAGATTCGCTCCAACTAGAGATGGAGCTATCCAAGGTGATTGAAGAAGCTAAAAGACTGGTTGGACATGTAGCTACTTTCAACATATTCATTTTGAAGTTGTCCAGCCATTGTGAGACCTTCAAATCCTTTGAAGAAGTGCCAAGTTTTGTTTGATCAAGAAATTGAATTCAATGGAGTCAGATTCTTTGCTATCTAATCCTATAATTATTAGACTTGTTATCCAGGTTCTCACTGAACCAAAGTCACCTACAAAAAAGAAAAATAGAGGTGATTAACTTGCCAGTAGGTGGTTTGATTTCCCACCTTCAAATGCTGCTAGAGATTTTCAATGAGCAACAAGGGTGAGGGGACGGTACCTAGATAAAAAAGAATGCAGGCTCAAGGAAGACTATGTAAAGGATGATCAATTGCATACGTTTTGAAATTATCACCTTGGATAGTCGAAGAAACAAGGTAGCCAAATCGATCAAACCTCAGATGTCACAGCTCCCTTTCTATTGCCACCAACTCATATTTTGACGATGATTGTATATAAGACTTGATTTTTAAAAAATGAAGGTGCTATGTATTTGAGCACATTAATCATCTGACCCCTTGGATTAGAGATAGGTGGCATGGTCATCATGACCAAGCACGAACATCGCTTCTGCCAGAAGCGTTTGACATGATGTGTTAGAAAACTATAATGGATATGACATCTAGAGCAGACAAGCATGAAGTTCCACAAACAACATTACGGTCTTGGATTACATTACCCAGAAGACTTGGGAAAGCTTCACAGTTTTCTCAAGGTAAACCTTTTTAGTCCAATTTTGTAATGACCTTGAGAGATAGATCGGAATACCCTTCTTCACGTATTTGGCTCATATGGACGTGTAATTCCTCAACTTGTATGGTCTTCCCTCTGAATGCATGCTTTACTTCAGTGCAAAGTGCAAAAGGGTATTTTTTAATTTTAATTTTATTTTTTTTAATGATTTTTAATAGAGTGAAGTGCTCAATTAATAAAATATAAACATTTGTATGCAATATTAAAATCTAGTATTAACTATGAAGCAGGCGCTCAAGTATCAATTAGTCTAGATATACAATATTTAGTTATTACGAAACCTTCAACCACAGAGAGGCTACAAAATAATTGATTAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGGTGTTGGTGGACAGGTTAACAAAAGTCCGTCCTTAAGATTTATTTTCAAAAAGGCTAATAATCATGTGGATTGATATTTTTTTTCAGTAAAGTTATGTGAGAGAAGGGCTTTGGGTATAAATAGAGGTCCTAGATTTGGAGTTGTATAGCATCCTTAATCATGGCAAACCGATAGAATTCAAGTTTTGAGGTTTTAGATGAGGACAACCTCTTTTTCCCTTCTTCTTGTTGTTTGTGGATATTTCAAGTAGTCATATCTAGGAGGGTGAAGGACAATATTCTTGAATGGTTTTTGGTAGGGACCAATGACCTGTCTTTTGTATCATCTTCCATTTGCTGATGAATACCATCTTCTTCTGCTCGAGTAGGTCGGAATCCTTCCTTAAACAAAATATATATTATTATTCTTTTAGTTTTATCTCCAGGTTGAAGCTATAGATAATTTCCCGATCCCTCTCATTCTCAATCTGCAGCTTATTGTGTTAGTGTTGCTCAAACATTGAACCAAAGAAAAAAAGTTAATTTATTCCATTATTTTTCTTCTTTTAGTTGGAAAAATGCATATTTTTCATAAATAGTCACCTACTCAAAAACTAGTTTTTAATGTAATTTATATATTCTGTTATTTCAAGTTTTACAAATTTACAATTTCTTAAATGGATGATCATGGGAAGCACTATCTTTTAATTGATTTTGCAGGCCTTACTGTCCAAAGCTGATGCTAGAGTAAAAGAGCTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTCTTAAATTCTCAACTCATTACCACCGATCGAAAAATTAGTAAAATTGCCACATGAATACTTTTGTATTCGTTAAATTCAGAAGAGTGGTTATTTTTAGGGAAGTGATGCTCTTACTATGTATAGGATCTTGTTACAAGATTTGGTAAAACTTATATAGTCTTTGGGTAGAATAAAAAAAATTCAAAACCAAAAGAGTCATAAAAGAAAAAAGTGAAAAGAAAGGCTTCATGATTTGTATGAGACTGTGAAGTTGATGGAGAACTTGACGACTTGTATAGAACATTGGTTTGTATTCAAAATAAGCGGTTTGTTGTTCTAGTGGAATCGTGGGAATCTAGGATGCTTGGTAGAGACGATGAAGATGAATTTAGCAACATAAGATACAATTGGCAATGAGAGAGGAGTTTGGAAGTATGCAAAGTTGCCCAATGGTCGATGATAATAAAGAAGGGAGAACTGTACGAACTCAGATGTGCTTCCATGATAATTACTTCTCCATATTGGAAGCAGAAAAAAAAGTTAATTATTGAAGATTCTATTAATTACTAATCCATTGATGACTAGCTACACCACCATGTTCACAAGAAAGGCCTCATCTACAAGAATGGGGACACACGCTTTACAGTGAGATTTATACCAACATAGAAATATCTTGTTGGAGGCAACCATTTGCTCCCAATAGCTCTTGGCTTTTCACTTTTGATACCTATCTGACTATGTGGATGCATAAACGAGGGACTTTTCTCACATGGCATTTACGTAATCAAGGATGTGGTAACTTGACTTAATGAACTGTACAAAAGAAGCTCACATGGAATGAGTATAATTATGGATTGTATGGTTCAAACAGAAAGCATTCAGGAAAGGAATTATATTTCTCGTCTGTACAATTTGCTGGAATTTGTCAGTTTTCAACAATTTCAATCATTTGTACTCCATGAATGAAAAATTATTTACTTTTCATTTCAGAAAAGAACACTTCAAGCACAAGAGGAATTGATACGAGGAAGAACAAAACTCAGGTTTGCACTAGATTTGTTGCTAATGAGCTGTTAGAAATAGTACCCTTATTGATACCTATTCTCATCTCTTTTTACTCTTTTGCAGGCAAGCAGGAAAACAGATCGAAGGTGTGATTCAGTCAGCTCATAAAATTGAAAGGAAGGCAAGAGGTACGCAAATGGTTTCTCTTGCCATGCAAAAGTTGAAGGATGATAGAAAAGTGCACTAAATTTTTGCTACATCTCATCTTACACTATTGTTTGTACCATGGTATCAGGTTTAAAAGATATTCTTGCGGATCTTCCGACAAGGGAAGCTTCACGATTTAGGACTCAGGCAAGTGTTCCATTTGACTGTTCACTTTTTTGATAGTATTACATCCCCGTTGAAGACTGTTGATTGGGATCTTTGAATCCTCTTTTTCAAAGTATTGATTGAATAGAGAAATGTTTAGAGGAAATTGCAGGATAATACACCCTATGAACTTATAGTTCTTCCCGGCATTATATTTTTTTAGTCATCAATCCCCTATCATTTATGATAATTCTCATTTGTGATTTATCGAAAACCCAGTGACGTATGCATATTGTTTAAAAAAAAAAAAAGTTCATTTTTTACTCTCAGTTCTGTTGGATGTGACACTTTTTCTTGATGGGTATTTACTCTTCTAATTGTGTTATTTTGTTGCTAGATTGATTGTTACTTTAATCTTTTTGATTCTAGGATTAGGTTCCAAATATTTTTCATCTTTGACATTATTTTGGTTTCTTTATTCATTAAATTTTCTATGATTTATTTGCTGGTTCAGGGGAGATATTAATTTTAATAGACTTATTCAAGTTCAAGGTTTTAATGGATAGAATTAGAAGTTATAAACCATGGTATATTTCAATAGACACAAATCTTGGGCTCTGCATTGCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCCAAAATTAGCAACTACGGCATCTCTGTCTGATAAATTCAAATTTAACACTTGGCTCGGTCTGGTCTGAAACTACCTGCATATCCTCTCTCATCTTTGTTTTTCTTCTTTTTAAACTGTTCGGCCAAAATAATTTTTGAAAGCTATCTATTGAGTTGTACCATTGAAAGGTGAATTTGATTGTTCAGTATAATAATTATATATGCAATACCAATAGAGTTGGTTCTTTTGATAGAACTTAATCTTAAATCTTGACAAATTCTTTGTATTGATGAATTTATCTTCGAATGATTCAGGGAGTGGATGGAAAATTTAAGCAATAAATAAGGATACCAACTCAAAATCATCCAATTGCATGTCCTGTCCATTGTGCATGACTTGTTACGATACTCTTGTATTGGTCATGCGACCCCCATTGCATGCTTTGATACCAACCTTGCTGCAATGGTGGGTTGTTTGCATATCCATCACTTCCTCATGAGGAACTTTCTATA

mRNA sequence

CGCGAGGAGACAGCCGGGGCTGCCAACATTTGAGAATATTGTTTTGCGAAGGGCTCAGCAGAAATACGCCAACGGGAGAACACTCTGTTGCAATGGCGATGGATGCTGGATCATCGTCCTCCCTAGAAAATCAATCTTTGCTTTCCAATCACCATGAATCTTCTCCAGGAAAACCTCAAGCATTGGAAGACTTGGCCAAGTCTTGGGCCGGCTACGCTGCCCAACAGGCGATGCTATACCAGCTCGCTATCAACCACTCCTTGGAGTCTGCCGTTGAAGCCTCCAAATCTCGCCTTGCTCAGATTCGTTCCACCTCCTATCCTCATTTCCAGAAGGCTATTGATTCATTTCAAGATGTGAAGTCAGAGGTTGCTGATTTTGAGAATTTATTCTTTGGAAAAGTTAGAGATGGCATTCTTGTCGCTGCATCACATCCGCTGATCAGTTGTGGAGTTGCAACTGGCATGGGTTTGTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTCGTGAATGAAGAGGCCTTACTGTCCAAAGCTGATGCTAGAGTAAAAGAGCTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCACAAGAGGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGAAAACAGATCGAAGGTGTGATTCAGTCAGCTCATAAAATTGAAAGGAAGGCAAGAGGTTTAAAAGATATTCTTGCGGATCTTCCGACAAGGGAAGCTTCACGATTTAGGACTCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCCAAAATTAGCAACTACGGCATCTCTGTCTGATAAATTCAAATTTAACACTTGGCTCGGTCTGGTCTGAAACTACCTGCATATCCTCTCTCATCTTTGTTTTTCTTCTTTTTAAACTGTTCGGCCAAAATAATTTTTGAAAGCTATCTATTGAGTTGTACCATTGAAAGGTGAATTTGATTGTTCAGTATAATAATTATATATGCAATACCAATAGAGTTGGTTCTTTTGATAGAACTTAATCTTAAATCTTGACAAATTCTTTGTATTGATGAATTTATCTTCGAATGATTCAGGGAGTGGATGGAAAATTTAAGCAATAAATAAGGATACCAACTCAAAATCATCCAATTGCATGTCCTGTCCATTGTGCATGACTTGTTACGATACTCTTGTATTGGTCATGCGACCCCCATTGCATGCTTTGATACCAACCTTGCTGCAATGGTGGGTTGTTTGCATATCCATCACTTCCTCATGAGGAACTTTCTATA

Coding sequence (CDS)

ATGGCGATGGATGCTGGATCATCGTCCTCCCTAGAAAATCAATCTTTGCTTTCCAATCACCATGAATCTTCTCCAGGAAAACCTCAAGCATTGGAAGACTTGGCCAAGTCTTGGGCCGGCTACGCTGCCCAACAGGCGATGCTATACCAGCTCGCTATCAACCACTCCTTGGAGTCTGCCGTTGAAGCCTCCAAATCTCGCCTTGCTCAGATTCGTTCCACCTCCTATCCTCATTTCCAGAAGGCTATTGATTCATTTCAAGATGTGAAGTCAGAGGTTGCTGATTTTGAGAATTTATTCTTTGGAAAAGTTAGAGATGGCATTCTTGTCGCTGCATCACATCCGCTGATCAGTTGTGGAGTTGCAACTGGCATGGGTTTGTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCGTTCGACTTTTCGTGAATGAAGAGGCCTTACTGTCCAAAGCTGATGCTAGAGTAAAAGAGCTGCGACAATCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCACAAGAGGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGAAAACAGATCGAAGGTGTGATTCAGTCAGCTCATAAAATTGAAAGGAAGGCAAGAGGTTTAAAAGATATTCTTGCGGATCTTCCGACAAGGGAAGCTTCACGATTTAGGACTCAGGTTTCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGCTTGAGCAAGGAGGTCTCCAAAATTAGCAACTACGGCATCTCTGTCTGA

Protein sequence

MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESAVEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV

Homology

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BLAST of Cp4.1LG12g04230 vs. ExPASy Swiss-Prot
Match: Q84K90 (RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 77/262 (29.39%), Postives = 143/262 (54.58%), Query Frame = 0


Query: 7   SSSSLENQSLLSNHHESSPGKPQALE---DLAKSWAGYAAQQAMLYQLAINHSLESAVEA 66
           S+ ++E +++      ++ G  +++E   + A+ W G         Q  +  S ++A+ +
Sbjct: 13  SAPAIETETVSDAMEHTAIGVVESVEGAIEGAEKWVGD-------LQRTVKESKDTAMRS 72

Query: 67  SKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVAT 126
           ++S    +R  S   F+   D      ++   +EN FF KV D ++ A  HP  + G+  
Sbjct: 73  ARS----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGV 132

Query: 127 GMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRTLQA 186
              L++ + PR FL+  T+  F +EEA   KA+  V+EL  S+D +K ES +L +RT  A
Sbjct: 133 AASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMSVDLMKKESRKLLERTALA 192

Query: 187 QEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASE 246
           ++++ RG ++L  +G  I  + +S HK E +A  L D L  +P R+A + R +V+++ S 
Sbjct: 193 EKDMKRGLSELMNSGNDIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSL 252

Query: 247 AKKERIGLSKEVSKISNYGISV 266
            +++RI L+K +  +S+ G+SV
Sbjct: 253 LRQKRIALNKRIMGMSDLGVSV 263

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BLAST of Cp4.1LG12g04230 vs. NCBI nr
Match: XP_023549103.1 (uncharacterized protein LOC111807564 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490 bits (1261), Expect = 5.72e-174
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA
Sbjct: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG
Sbjct: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 ASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. NCBI nr
Match: XP_022959270.1 (uncharacterized protein LOC111460300 [Cucurbita moschata])

HSP 1 Score: 483 bits (1242), Expect = 4.50e-171
Identity = 262/265 (98.87%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSSLENQS LSNHHESS GKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           VEASKSRL+QIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 ASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. NCBI nr
Match: XP_023006638.1 (uncharacterized protein LOC111499304 [Cucurbita maxima])

HSP 1 Score: 480 bits (1236), Expect = 3.69e-170
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSSLEN S LSNHHESSPGKPQALEDLAKSW GYAAQQAMLYQLAINHSLESA
Sbjct: 1   MAMDAGSSSSLENPSSLSNHHESSPGKPQALEDLAKSWVGYAAQQAMLYQLAINHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           VEASKSRL+QIRSTSYPHFQKAIDSFQDVKSEVADFENL FGKVRDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLLFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 ASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. NCBI nr
Match: KAG7013794.1 (hypothetical protein SDJN02_23961 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 478 bits (1229), Expect = 4.63e-169
Identity = 262/267 (98.13%), Postives = 263/267 (98.50%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSSLENQS LSNHHESS GKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           VEASKSRL+QIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQ--VS 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQ  VS
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQASVS 240

Query: 241 NLASEAKKERIGLSKEVSKISNYGISV 265
           NLASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 NLASEAKKERIGLSKEVSKISNYGISV 267

[Close]

BLAST of Cp4.1LG12g04230 vs. NCBI nr
Match: KAG6575225.1 (RGS1-HXK1-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 475 bits (1223), Expect = 3.29e-168
Identity = 258/263 (98.10%), Postives = 261/263 (99.24%), Query Frame = 0


Query: 3   MDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESAVE 62
           MDAGSSSSLENQS LSNHHESS GKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESAVE
Sbjct: 1   MDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESAVE 60

Query: 63  ASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVA 122
           ASKSRL+QIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVA 120

Query: 123 TGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRTLQ 182
           TGMGLLVFKKPRNFLYYKTVRLF+NEEALLSKADARVKELRQSIDRIKVESERLEKRTLQ
Sbjct: 121 TGMGLLVFKKPRNFLYYKTVRLFMNEEALLSKADARVKELRQSIDRIKVESERLEKRTLQ 180

Query: 183 AQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLAS 242
           AQEELIRGRTKLRQAGKQIEGVIQSA+KIERKARGLKDILADLPTREASRFRTQVSNLAS
Sbjct: 181 AQEELIRGRTKLRQAGKQIEGVIQSANKIERKARGLKDILADLPTREASRFRTQVSNLAS 240

Query: 243 EAKKERIGLSKEVSKISNYGISV 265
           EAKKERIGLSKEVSKISNYGISV
Sbjct: 241 EAKKERIGLSKEVSKISNYGISV 263

[Close]

BLAST of Cp4.1LG12g04230 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1)

HSP 1 Score: 483 bits (1242), Expect = 2.18e-171
Identity = 262/265 (98.87%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSSLENQS LSNHHESS GKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA
Sbjct: 1   MAMDAGSSSSLENQSSLSNHHESSLGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           VEASKSRL+QIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 ASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1)

HSP 1 Score: 480 bits (1236), Expect = 1.79e-170
Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSSLEN S LSNHHESSPGKPQALEDLAKSW GYAAQQAMLYQLAINHSLESA
Sbjct: 1   MAMDAGSSSSLENPSSLSNHHESSPGKPQALEDLAKSWVGYAAQQAMLYQLAINHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           VEASKSRL+QIRSTSYPHFQKAIDSFQDVKSEVADFENL FGKVRDGILVAASHPLISCG
Sbjct: 61  VEASKSRLSQIRSTSYPHFQKAIDSFQDVKSEVADFENLLFGKVRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL
Sbjct: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 ASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 5.11e-154
Identity = 237/265 (89.43%), Postives = 251/265 (94.72%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MAMDAGSSSS ENQS  S HHESS  KPQ+LEDLAK WA YAAQQA+LYQ AI+HSLESA
Sbjct: 1   MAMDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           +EASKSRL+QIRSTSYPHFQKAIDSF + KSE+A +ENL FGK+RDGILVAASHPLISCG
Sbjct: 61  IEASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATGMG LVFKKPR+FLYYKTVRLF+NEE+LLSKADA+VKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGMGFLVFKKPRSFLYYKTVRLFMNEESLLSKADAKVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQA+EELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL
Sbjct: 181 LQAEEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERIGLSKEVSKISNYGISV
Sbjct: 241 ASEAKKERIGLSKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1)

HSP 1 Score: 435 bits (1119), Expect = 1.12e-152
Identity = 235/263 (89.35%), Postives = 249/263 (94.68%), Query Frame = 0


Query: 3   MDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESAVE 62
           MDAGSSSS ENQS  S HHESS  KPQ+LEDLAK WA YAAQQA+LYQ AI+HSLESA+E
Sbjct: 1   MDAGSSSSQENQSSPSYHHESSSSKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIE 60

Query: 63  ASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVA 122
           ASKSRL+QIRSTSYPHFQKAIDSF + KSE+A +ENL FGK+RDGILVAASHPLISCGVA
Sbjct: 61  ASKSRLSQIRSTSYPHFQKAIDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVA 120

Query: 123 TGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRTLQ 182
           TGMG LVFKKPR+FLYYKTVRLF+NEE+LLSKADA+VKELRQSIDRIKVESERLEKRTLQ
Sbjct: 121 TGMGFLVFKKPRSFLYYKTVRLFMNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQ 180

Query: 183 AQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLAS 242
           A+EELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLAS
Sbjct: 181 AEEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLAS 240

Query: 243 EAKKERIGLSKEVSKISNYGISV 265
           EAKKERIGLSKEVSKISNYGISV
Sbjct: 241 EAKKERIGLSKEVSKISNYGISV 263

[Close]

BLAST of Cp4.1LG12g04230 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1)

HSP 1 Score: 397 bits (1019), Expect = 2.03e-137
Identity = 216/265 (81.51%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDLAKSWAGYAAQQAMLYQLAINHSLESA 60
           MA D+GSSSS E  S  S  +ESS GKPQ+L  LAK WA YAA QA+LYQ  I+ SLESA
Sbjct: 1   MATDSGSSSSEEELSSSSPLNESSSGKPQSLASLAKPWADYAAHQALLYQRTIDDSLESA 60

Query: 61  VEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCG 120
           ++ASKSRL+QIRSTS+PH QK IDSFQD KSE+A +ENL FGK+RDGILVAASHPLISCG
Sbjct: 61  IQASKSRLSQIRSTSHPHLQKTIDSFQDAKSELAAYENLLFGKIRDGILVAASHPLISCG 120

Query: 121 VATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRT 180
           VATG+G LV KKPRNFLY+KT+RLF+NEE+LLSKADA+VKELRQSIDRIKVESERLEKRT
Sbjct: 121 VATGLGFLVLKKPRNFLYHKTIRLFMNEESLLSKADAQVKELRQSIDRIKVESERLEKRT 180

Query: 181 LQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNL 240
           LQA+ EL+RGRTKLRQAGKQIEGVIQSAH IERKARGLKDILADLPTREAS+FRTQVSNL
Sbjct: 181 LQAEGELLRGRTKLRQAGKQIEGVIQSAHTIERKARGLKDILADLPTREASQFRTQVSNL 240

Query: 241 ASEAKKERIGLSKEVSKISNYGISV 265
           ASEAKKERI L KEVSKISNYGISV
Sbjct: 241 ASEAKKERIALGKEVSKISNYGISV 265

[Close]

BLAST of Cp4.1LG12g04230 vs. TAIR 10
Match: AT2G45060.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 265.4 bits (677), Expect = 4.9e-71
Identity = 150/272 (55.15%), Postives = 195/272 (71.69%), Query Frame = 0


Query: 1   MAMDAGSSSSLENQSLLSNHHESSPGKPQALEDL-------AKSWAGYAAQQAMLYQLAI 60
           MA    SSSS  + +      +SSP  P   + +       A SW   A +QA++YQ  I
Sbjct: 1   MAALGESSSSEMDNAKSPEIQQSSPVHPPEYQKIATTTVENAASWIDDALRQALVYQKTI 60

Query: 61  NHSLESAVEASKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAAS 120
             +++S ++ASK+RL+QIR TS  H  + IDS +D+ SE   +E + FGK++DG+ VAAS
Sbjct: 61  TETVDSTIDASKARLSQIRDTSVAHTSQTIDSLRDIASEYNVYEQMVFGKIKDGVNVAAS 120

Query: 121 HPLISCGVATGMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVES 180
           HPLIS  +A G+G+   KK R F+YY TVR+FV+EEALLS+AD +VKELRQS+DR+K ES
Sbjct: 121 HPLISGTLAFGVGIFALKKTRRFVYYNTVRMFVSEEALLSRADLKVKELRQSMDRLKAES 180

Query: 181 ERLEKRTLQAQEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRF 240
           E+LE+    A+EE IRGR KLRQAGKQI G I SA+KIE++A GLKD+L +LPTREASRF
Sbjct: 181 EKLERVATVAEEEFIRGRMKLRQAGKQIRGAISSAYKIEKQAAGLKDVLKELPTREASRF 240

Query: 241 RTQVSNLASEAKKERIGLSKEVSKISNYGISV 266
           RTQ+S  ASE K+ER  L+KEV+KISNYGISV
Sbjct: 241 RTQISKRASEVKQERNALTKEVNKISNYGISV 272

[Close]

BLAST of Cp4.1LG12g04230 vs. TAIR 10
Match: AT4G26410.1 (Uncharacterised conserved protein UCP022280 )

HSP 1 Score: 118.6 bits (296), Expect = 7.5e-27
Identity = 77/262 (29.39%), Postives = 143/262 (54.58%), Query Frame = 0


Query: 7   SSSSLENQSLLSNHHESSPGKPQALE---DLAKSWAGYAAQQAMLYQLAINHSLESAVEA 66
           S+ ++E +++      ++ G  +++E   + A+ W G         Q  +  S ++A+ +
Sbjct: 13  SAPAIETETVSDAMEHTAIGVVESVEGAIEGAEKWVGD-------LQRTVKESKDTAMRS 72

Query: 67  SKSRLAQIRSTSYPHFQKAIDSFQDVKSEVADFENLFFGKVRDGILVAASHPLISCGVAT 126
           ++S    +R  S   F+   D      ++   +EN FF KV D ++ A  HP  + G+  
Sbjct: 73  ARS----LRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYAKEHPAAAIGIGV 132

Query: 127 GMGLLVFKKPRNFLYYKTVRLFVNEEALLSKADARVKELRQSIDRIKVESERLEKRTLQA 186
              L++ + PR FL+  T+  F +EEA   KA+  V+EL  S+D +K ES +L +RT  A
Sbjct: 133 AASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMSVDLMKKESRKLLERTALA 192

Query: 187 QEELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASE 246
           ++++ RG ++L  +G  I  + +S HK E +A  L D L  +P R+A + R +V+++ S 
Sbjct: 193 EKDMKRGLSELMNSGNDIHRLAKSVHKAECEAADLMDGLRQIPGRDAIKLRAEVASMTSL 252

Query: 247 AKKERIGLSKEVSKISNYGISV 266
            +++RI L+K +  +S+ G+SV
Sbjct: 253 LRQKRIALNKRIMGMSDLGVSV 263

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84K90	1.1e-25	29.39	RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV...	[more]

BLAST of Cp4.1LG12g04230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549103.1	5.72e-174	100.00	uncharacterized protein LOC111807564 [Cucurbita pepo subsp. pepo]	[more]
XP_022959270.1	4.50e-171	98.87	uncharacterized protein LOC111460300 [Cucurbita moschata]	[more]
XP_023006638.1	3.69e-170	98.11	uncharacterized protein LOC111499304 [Cucurbita maxima]	[more]
KAG7013794.1	4.63e-169	98.13	hypothetical protein SDJN02_23961 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6575225.1	3.29e-168	98.10	RGS1-HXK1-interacting protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG12g04230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H5U3	2.18e-171	98.87	uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC1114603...	[more]
A0A6J1L5I2	1.79e-170	98.11	uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304...	[more]
A0A1S3CAD0	5.11e-154	89.43	uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=...	[more]
A0A5D3DNB0	1.12e-152	89.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1DXH1	2.03e-137	81.51	uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Cp4.1LG12g04230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45060.1	4.9e-71	55.15	Uncharacterised conserved protein UCP022280	[more]
AT4G26410.1	7.5e-27	29.39	Uncharacterised conserved protein UCP022280	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR34554:SF1	ALANINE-TRNA LIGASE	coord: 3..265
None	No IPR available	PANTHER	PTHR34554	RGS1-HXK1-INTERACTING PROTEIN 1	coord: 3..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04230.1	Cp4.1LG12g04230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane