Cp4.1LG12g04120 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g04120
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B box-type domain-containing protein
Location	Cp4.1LG12: 2976175 .. 2977944 (+)
RNA-Seq Expression	Cp4.1LG12g04120
Synteny	Cp4.1LG12g04120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTGCAGTAACAGAGAAAAGTCACTGTTTCACGTCTTGTCATTTGAGAAAGAGAGACACAGAAACGATGAGCAATTTAGACGTACCTCAATTGGCTTAGGGTTTTCAGGATCCTTCATCTCTCTCTGTCCCAATGCCTTCTTAAACCCTAATCACTCCCTCTTTCTCTCATCACAACAACAATGGTGGGTTCATTAATACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCTTCACCAATTAATCACTTCTAAACCCTATACTCTGTTTCTTCTTCTTGCAGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGGTCAATTCTCAACCCATTTTCTTCAATACCCATTTCCCTCTTCTTTCTTTCTTAATTCCTTTTTCGTTGTTCTTCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAAGTATGTTCTTGATTGAGTTTGCAGAAACAGAGTAATTTTATTGTTTATCTTAATTGGGTTTGCAAGAAACAGAGTGAGTTTATTCTATATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTATTGTACATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTATTCTTTATCTTAATTGGGTTTGCAGAAACAGAGTGATTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTGATTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTGGTTTGTTGTTTATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTGCAGAAACAGAGTGATTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAACTTTGTTGTTCATCTTAATTGGGTTTGCAGAAACAGAGTAATTTTGTTGTTTTTGGTTGGTTGATTTAGTCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCCGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGGTTTAATTTCAAAATCCCCTTTCGATTTTCAATCTTCTGTTATGAACGTTGGTTTCGTTTCACAGATTGATTATCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGACTCATGATGACGCCGGACTCTGTTCTCGAACTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGAAGGAGGAAGGAGTGTAGTAGCGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGAATTTTTTATTATTATTATTATAAGGAGGGGATTTTGGGGACATGGATGGCATTTTGTGTTTCTCGTGGGGGTATTTTTGTAAAGGAGGCTCCTTCTGGCTTCTGAATTAAATTTTATAATTGTTATTTTAA

mRNA sequence

TGTGCAGTAACAGAGAAAAGTCACTGTTTCACGTCTTGTCATTTGAGAAAGAGAGACACAGAAACGATGAGCAATTTAGACGTACCTCAATTGGCTTAGGGTTTTCAGGATCCTTCATCTCTCTCTGTCCCAATGCCTTCTTAAACCCTAATCACTCCCTCTTTCTCTCATCACAACAACAATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCCGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGATTGATTATCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGACTCATGATGACGCCGGACTCTGTTCTCGAACTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGAAGGAGGAAGGAGTGTAGTAGCGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGAATTTTTTATTATTATTATTATAAGGAGGGGATTTTGGGGACATGGATGGCATTTTGTGTTTCTCGTGGGGGTATTTTTGTAAAGGAGGCTCCTTCTGGCTTCTGAATTAAATTTTATAATTGTTATTTTAA

Coding sequence (CDS)

ATGCACTCTCTACCCATCTGGCTCCAAGCGCTCCTCACCCACAAGTTCTTCAACGCCTGTGTTCTTCACGAACACGCCAAAAAGAACGAAAAAAACATCTTCTGTTTCGACTGTTCTCTCGGCATTTGCCCTCACTGCCTCTCCTCCCATTCTTCCCACAAACTCCTCCAGATTAGGCGTTATGTGTATCACGATGTGATTCGATTGGATGATGCTACTAAACTCATCGACTGCGCTTTTGTTCAATCTTACACTACGAATAGTGCGAAAGTGGTGTTTCTGAAACAAAGGCCACAGACCCGAAACTTCCGAGGCTCCTCCGGCAACCTCTGCAGCACCTGCGATAGAAGCCTTCAAGATCCTTATCTCTTTTGCTCTCTTTCCTGCAAGATTGATTATCTAATGAAGACGGAAGGTGGCGTTTCGAGGAATCTTTTGGAGTGTAATTTCTCGGCATGGGACGACGGACTCATGATGACGCCGGACTCTGTTCTCGAACTCGGTGGTTCGAACCAGACCTCCTCCGGTTCCGACGGCGGTGGTGTAGAAGAAGGAGGAAGGAGTGTAGTAGCGTCGACGGCAACGACGGAGTTCGTGAAGAAAAAGAGAAGTAGCTTGACGGCGGCGTATAGGGCAGCGTGCCGGCCGGCTTGCTGGCCAGGGACGATTTCCGAGACGTCTGGGAGTTTATTGAGCCGGAGAAAAGGTACCCCACAGCGGGCCCCACTCTATTGA

Protein sequence

MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQRAPLY

Homology

[Close]

BLAST of Cp4.1LG12g04120 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 113/259 (43.63%), Postives = 153/259 (59.07%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 64
           P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 65  DVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 124
           DV+RL+D  KLIDC+ VQ+YT NSAKVVF+K+RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 125 CSLSCKIDYLMKTEGGVSRNLLECNFSA------------WDDGLMM--TPDSVLELGGS 184
           CSL CK+D++MK    ++  L  C+                DD +    TP S +  G  
Sbjct: 126 CSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGDE 185

Query: 185 NQTSSGSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETS--- 244
           + + S +       G  +  A+T TT  V+KKR+      ++A        +  E S   
Sbjct: 186 SMSWSSASSDNNNAGAAAAYAAT-TTHVVRKKRTGFCLCAKSA-------NSYKEVSEDP 245

[Close]

BLAST of Cp4.1LG12g04120 vs. NCBI nr
Match: XP_023548824.1 (uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 500 bits (1288), Expect = 8.65e-179
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180
           PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG
Sbjct: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180

Query: 181 GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240
           GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR
Sbjct: 181 GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240

Query: 241 APLY 244
           APLY
Sbjct: 241 APLY 244

[Close]

BLAST of Cp4.1LG12g04120 vs. NCBI nr
Match: XP_022959264.1 (uncharacterized protein LOC111460295 [Cucurbita moschata])

HSP 1 Score: 492 bits (1266), Expect = 1.89e-175
Identity = 242/244 (99.18%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180
           PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG
Sbjct: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180

Query: 181 GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240
           GVE GGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR
Sbjct: 181 GVE-GGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240

Query: 241 APLY 244
           APLY
Sbjct: 241 APLY 243

[Close]

BLAST of Cp4.1LG12g04120 vs. NCBI nr
Match: XP_023006650.1 (uncharacterized protein LOC111499311 [Cucurbita maxima])

HSP 1 Score: 491 bits (1264), Expect = 3.95e-175
Identity = 239/244 (97.95%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCA VQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180
           PYLFCSLSCKIDYLMKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG 
Sbjct: 121 PYLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGS 180

Query: 181 GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240
           GVEEGGRSVVASTATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR
Sbjct: 181 GVEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240

Query: 241 APLY 244
           APLY
Sbjct: 241 APLY 244

[Close]

BLAST of Cp4.1LG12g04120 vs. NCBI nr
Match: XP_011656872.1 (uncharacterized protein LOC101214475 [Cucumis sativus] >KGN46574.1 hypothetical protein Csa_005519 [Cucumis sativus])

HSP 1 Score: 434 bits (1117), Expect = 1.21e-152
Identity = 219/252 (86.90%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MCSLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSS 180
           PYLFCS+SCKIDYL+KT+GG+S++LLECNF       WDDGLMMTPDSVLE  GSN++SS
Sbjct: 121 PYLFCSVSCKIDYLVKTQGGISKHLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSNRSSS 180

Query: 181 GSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAA---YRAACRPACWPGTISETSGSLLS 240
           GSDGGG E  G+++V STATTEFVKKKRSSLTAA   YRAACRP CWPGTISETSGSL+S
Sbjct: 181 GSDGGGTE--GKTLV-STATTEFVKKKRSSLTAAAAAYRAACRPVCWPGTISETSGSLMS 240

Query: 241 RRKGTPQRAPLY 244
           RRKGTPQRAPLY
Sbjct: 241 RRKGTPQRAPLY 249

[Close]

BLAST of Cp4.1LG12g04120 vs. NCBI nr
Match: XP_008458138.1 (PREDICTED: uncharacterized protein LOC103497663 [Cucumis melo])

HSP 1 Score: 433 bits (1114), Expect = 3.23e-152
Identity = 219/250 (87.60%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MCSLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSS 180
           PYLFCS+SCKIDYL+KT+GG+S+ LLECNF       WDDGLMMTPDSVLE  GS +TSS
Sbjct: 121 PYLFCSVSCKIDYLVKTQGGISKYLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSTRTSS 180

Query: 181 GSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAA-YRAACRPACWPGTISETSGSLLSRR 240
           GSDGGG E  G+++V STATTEFVKKKRSSLTAA YRAACRP CWPGTISETSGSL+SRR
Sbjct: 181 GSDGGGTE--GKTLV-STATTEFVKKKRSSLTAAAYRAACRPVCWPGTISETSGSLMSRR 240

Query: 241 KGTPQRAPLY 244
           KGTPQRAPLY
Sbjct: 241 KGTPQRAPLY 247

[Close]

BLAST of Cp4.1LG12g04120 vs. ExPASy TrEMBL
Match: A0A6J1H7K0 (uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC111460295 PE=4 SV=1)

HSP 1 Score: 492 bits (1266), Expect = 9.14e-176
Identity = 242/244 (99.18%), Postives = 242/244 (99.18%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFL QRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLNQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180
           PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG
Sbjct: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180

Query: 181 GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240
           GVE GGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR
Sbjct: 181 GVE-GGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240

Query: 241 APLY 244
           APLY
Sbjct: 241 APLY 243

[Close]

BLAST of Cp4.1LG12g04120 vs. ExPASy TrEMBL
Match: A0A6J1L0Q7 (uncharacterized protein LOC111499311 OS=Cucurbita maxima OX=3661 GN=LOC111499311 PE=4 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 1.91e-175
Identity = 239/244 (97.95%), Postives = 241/244 (98.77%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCA VQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCASVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWDDGLMMTPDSVLELGGSNQTSSGSDGG 180
           PYLFCSLSCKIDYLMKTEGGVSRN+LECNFSAWDDGLMMTPDSVLE GGSNQTSSGSDG 
Sbjct: 121 PYLFCSLSCKIDYLMKTEGGVSRNVLECNFSAWDDGLMMTPDSVLEFGGSNQTSSGSDGS 180

Query: 181 GVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240
           GVEEGGRSVVASTATT+FVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR
Sbjct: 181 GVEEGGRSVVASTATTDFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQR 240

Query: 241 APLY 244
           APLY
Sbjct: 241 APLY 244

[Close]

BLAST of Cp4.1LG12g04120 vs. ExPASy TrEMBL
Match: A0A0A0KCM1 (B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 PE=4 SV=1)

HSP 1 Score: 434 bits (1117), Expect = 5.87e-153
Identity = 219/252 (86.90%), Postives = 232/252 (92.06%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MCSLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSS 180
           PYLFCS+SCKIDYL+KT+GG+S++LLECNF       WDDGLMMTPDSVLE  GSN++SS
Sbjct: 121 PYLFCSVSCKIDYLVKTQGGISKHLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSNRSSS 180

Query: 181 GSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAA---YRAACRPACWPGTISETSGSLLS 240
           GSDGGG E  G+++V STATTEFVKKKRSSLTAA   YRAACRP CWPGTISETSGSL+S
Sbjct: 181 GSDGGGTE--GKTLV-STATTEFVKKKRSSLTAAAAAYRAACRPVCWPGTISETSGSLMS 240

Query: 241 RRKGTPQRAPLY 244
           RRKGTPQRAPLY
Sbjct: 241 RRKGTPQRAPLY 249

[Close]

BLAST of Cp4.1LG12g04120 vs. ExPASy TrEMBL
Match: A0A1S3C8E3 (uncharacterized protein LOC103497663 OS=Cucumis melo OX=3656 GN=LOC103497663 PE=4 SV=1)

HSP 1 Score: 433 bits (1114), Expect = 1.57e-152
Identity = 219/250 (87.60%), Postives = 230/250 (92.00%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M SLPIWLQALLT KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR
Sbjct: 1   MCSLPIWLQALLTEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSS 180
           PYLFCS+SCKIDYL+KT+GG+S+ LLECNF       WDDGLMMTPDSVLE  GS +TSS
Sbjct: 121 PYLFCSVSCKIDYLVKTQGGISKYLLECNFLPLPEPGWDDGLMMTPDSVLEPVGSTRTSS 180

Query: 181 GSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAA-YRAACRPACWPGTISETSGSLLSRR 240
           GSDGGG E  G+++V STATTEFVKKKRSSLTAA YRAACRP CWPGTISETSGSL+SRR
Sbjct: 181 GSDGGGTE--GKTLV-STATTEFVKKKRSSLTAAAYRAACRPVCWPGTISETSGSLMSRR 240

Query: 241 KGTPQRAPLY 244
           KGTPQRAPLY
Sbjct: 241 KGTPQRAPLY 247

[Close]

BLAST of Cp4.1LG12g04120 vs. ExPASy TrEMBL
Match: A0A6J1HHL3 (uncharacterized protein LOC111464390 OS=Cucurbita moschata OX=3662 GN=LOC111464390 PE=4 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 4.15e-142
Identity = 205/252 (81.35%), Postives = 221/252 (87.70%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M+++PIWLQ LL+ KFFNACV+HE AKKNEKNIFCFDCSLGICPHCLSSH SHKLLQIRR
Sbjct: 1   MYTVPIWLQPLLSEKFFNACVVHEDAKKNEKNIFCFDCSLGICPHCLSSHRSHKLLQIRR 60

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDVIRLDDA KLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD
Sbjct: 61  YVYHDVIRLDDAVKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNF-----SAWDDGLMMTPDSVLELGGSNQTSS 180
           PYLFCSLSCKIDYL+K +GGVSR+LLECNF       WDDG++MTPDSVLE  GS +TSS
Sbjct: 121 PYLFCSLSCKIDYLVKAQGGVSRHLLECNFLPLPEPVWDDGMIMTPDSVLEPAGSTRTSS 180

Query: 181 GSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAA---YRAACRPACWPGTISETSGSLLS 240
            SDGG V E  R+ +ASTATT+FVKKKRSSLTAA   YR  CRPAC   T+SETSGSL+S
Sbjct: 181 SSDGGRVLEM-RTTIASTATTDFVKKKRSSLTAAAAAYRTTCRPACCSVTVSETSGSLMS 240

Query: 241 RRKGTPQRAPLY 244
           RRK TPQRAPLY
Sbjct: 241 RRKSTPQRAPLY 251

[Close]

BLAST of Cp4.1LG12g04120 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 256.9 bits (655), Expect = 1.6e-68
Identity = 137/242 (56.61%), Postives = 165/242 (68.18%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 64
           P WL+ LL  KFFNAC+ HE  KKNEKNI C DC L ICPHCLSSH+SH+LLQIRRYVY 
Sbjct: 7   PAWLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYR 66

Query: 65  DVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 124
           DV+R++D +KL+DC+ +Q YTTNS+KVVF+ +RPQ+R FRG SGN+C TCDRSLQ PYLF
Sbjct: 67  DVLRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFRG-SGNICITCDRSLQSPYLF 126

Query: 125 CSLSCKIDYLMKTEGGVSRNLLECN-FSAWDDGLMMTPDSVLELGGSNQTSSGSDGG-GV 184
           C LSCKI  ++  + G+S  L  CN     D+    TP S LE  GSN+TSS S G  G 
Sbjct: 127 CCLSCKISDVIMRQRGLSGFLRVCNVLDLTDEVTTTTPSSTLEPTGSNRTSSESSGNEGE 186

Query: 185 EEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRKGTPQRAP 244
           +      +A TATTE V+KKRSSL+   R          T  E   + L+RRK  PQRAP
Sbjct: 187 DMFWCQALACTATTEIVRKKRSSLSTTCRRVTEVVSTTNT--EAPVNFLNRRKNPPQRAP 245

[Close]

BLAST of Cp4.1LG12g04120 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 113/259 (43.63%), Postives = 153/259 (59.07%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRRYVYH 64
           P WL AL   KFF  C  HE AKKNE+N+ C DC   +CPHC+ SH  H+LLQ+RRYVYH
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYH 65

Query: 65  DVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYLF 124
           DV+RL+D  KLIDC+ VQ+YT NSAKVVF+K+RPQ R F+G +GN C++CDRSLQ+PY+ 
Sbjct: 66  DVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKG-AGNYCTSCDRSLQEPYIH 125

Query: 125 CSLSCKIDYLMKTEGGVSRNLLECNFSA------------WDDGLMM--TPDSVLELGGS 184
           CSL CK+D++MK    ++  L  C+                DD +    TP S +  G  
Sbjct: 126 CSLGCKVDFVMKRYRDITPFLKPCHTLTLGPDYIIPQDLLTDDEVAAYETPRSTVVDGDE 185

Query: 185 NQTSSGSDGGGVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETS--- 244
           + + S +       G  +  A+T TT  V+KKR+      ++A        +  E S   
Sbjct: 186 SMSWSSASSDNNNAGAAAAYAAT-TTHVVRKKRTGFCLCAKSA-------NSYKEVSEDP 245

[Close]

BLAST of Cp4.1LG12g04120 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 185.3 bits (469), Expect = 6.0e-47
Identity = 109/247 (44.13%), Postives = 141/247 (57.09%), Query Frame = 0


Query: 1   MHSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLGICPHCLSSHSSHKLLQIRR 60
           M + P WL+ L+   FF++C +HE  +K+EKN+FC  C L +CPHCL SH SH LLQ+RR
Sbjct: 15  MATKPAWLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRR 74

Query: 61  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 120
           YVYHDV+RL D  KLIDC++VQ YT N AKV+FL QR Q+R     S N+C TCDR LQ+
Sbjct: 75  YVYHDVVRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQSR--AKVSSNVCFTCDRILQE 134

Query: 121 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFSAWD-DGLMMTPDSVLELGGSNQTSSGSD- 180
           P+ FCSLSCK+DYL      +S  L   + S +  +GL M  D   +LG  +    G D 
Sbjct: 135 PFHFCSLSCKVDYLSYQGDDLSSILYRIDESDFTFEGLRM--DGHDQLGEISTMEDGEDI 194

Query: 181 ---GGGVEEGGRSVVASTATTEFVKKKRSSLTAAYRAACRPACWPGTISETSGSLLSRRK 240
                  E+G  S        E  K K+    + Y         PG +  + G   +RRK
Sbjct: 195 LVISDESEQGNNS-----HKKEKKKSKKKKPESNY--------LPGMVLSSLG---NRRK 241

Query: 241 GTPQRAP 243
           G P RAP
Sbjct: 255 GAPHRAP 241

[Close]

BLAST of Cp4.1LG12g04120 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 132.5 bits (332), Expect = 4.6e-31
Identity = 67/133 (50.38%), Postives = 83/133 (62.41%), Query Frame = 0


Query: 5   PIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCSLG-ICPHCLSSHSSHKLLQIRRYVY 64
           P WL+ LL  KFF  C LH  + K+E N++C DC+ G +C  CLS H  H  +QIRR  Y
Sbjct: 12  PHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSY 71

Query: 65  HDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQDPYL 124
           HDVIR+ +  K +D   VQ+Y  NSAKVVFL +RPQ R  +G   N C  C RSL D + 
Sbjct: 72  HDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVI-NTCEVCYRSLVDSFR 131

Query: 125 FCSLSCKIDYLMK 137
           FCSL CKI  + K
Sbjct: 132 FCSLGCKISGISK 143

[Close]

BLAST of Cp4.1LG12g04120 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.0e-30
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 2   HSLPIWLQALLTHKFFNACVLHEHAKKNEKNIFCFDCS-LGICPHCLSSHSSHKLLQIRR 61
           ++ P WL  +L   +F  C +H  + KNE N+FC DC+    C +CL  H  H+++QIRR
Sbjct: 13  YTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRR 72

Query: 62  YVYHDVIRLDDATKLIDCAFVQSYTTNSAKVVFLKQRPQTRNFRGSSGNLCSTCDRSLQD 121
             YH+V+R+++  K ID A VQ+Y  NSAK+VFL +RPQ R  +G + N C  C RSL D
Sbjct: 73  SSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVT-NTCEICCRSLLD 132

Query: 122 PYLFCSLSCKIDYLMKTEGGVSRNLLECNFS 152
            + FCSL CK+       GG+ R  L   FS
Sbjct: 133 SFRFCSLGCKL-------GGMRRGDLSLTFS 155

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g04120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	2.1e-52	43.63	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG12g04120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548824.1	8.65e-179	100.00	uncharacterized protein LOC111807359 [Cucurbita pepo subsp. pepo]	[more]
XP_022959264.1	1.89e-175	99.18	uncharacterized protein LOC111460295 [Cucurbita moschata]	[more]
XP_023006650.1	3.95e-175	97.95	uncharacterized protein LOC111499311 [Cucurbita maxima]	[more]
XP_011656872.1	1.21e-152	86.90	uncharacterized protein LOC101214475 [Cucumis sativus] >KGN46574.1 hypothetical ...	[more]
XP_008458138.1	3.23e-152	87.60	PREDICTED: uncharacterized protein LOC103497663 [Cucumis melo]	[more]

BLAST of Cp4.1LG12g04120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H7K0	9.14e-176	99.18	uncharacterized protein LOC111460295 OS=Cucurbita moschata OX=3662 GN=LOC1114602...	[more]
A0A6J1L0Q7	1.91e-175	97.95	uncharacterized protein LOC111499311 OS=Cucurbita maxima OX=3661 GN=LOC111499311...	[more]
A0A0A0KCM1	5.87e-153	86.90	B box-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G109690 ...	[more]
A0A1S3C8E3	1.57e-152	87.60	uncharacterized protein LOC103497663 OS=Cucumis melo OX=3656 GN=LOC103497663 PE=...	[more]
A0A6J1HHL3	4.15e-142	81.35	uncharacterized protein LOC111464390 OS=Cucurbita moschata OX=3662 GN=LOC1114643...	[more]

BLAST of Cp4.1LG12g04120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60670.1	1.6e-68	56.61	PLATZ transcription factor family protein	[more]
AT2G12646.1	1.5e-53	43.63	PLATZ transcription factor family protein	[more]
AT1G31040.1	6.0e-47	44.13	PLATZ transcription factor family protein	[more]
AT1G32700.1	4.6e-31	50.38	PLATZ transcription factor family protein	[more]
AT1G21000.1	1.0e-30	43.71	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 59..131 e-value: 3.8E-26 score: 91.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..186
None	No IPR available	PANTHER	PTHR31065:SF61	BNAC04G22060D PROTEIN	coord: 3..244
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 3..244
None	No IPR available	SUPERFAMILY	57845	B-box zinc-binding domain	coord: 18..62
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 20..58 score: 9.10072

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g04120.1	Cp4.1LG12g04120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding