Cp4.1LG12g01300 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCCTCCTAGGGCGTCAAGGAAGCGAAAGGAGGTTGAGCCGTTTGTGAAGCCAAAAGCTACGGGAGTCGACTCAGTCTCGTCGAATCAGCTTCTAGCCGGCTACCTTGCTCACGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCGAAGTGAAGCCGTTGGAATGACTAGCTCACAGCCATCTGAGTGTAAGAGGACGAAGCCGGAAGCCGCCGCCGCTGCCGCTCCGAGCGTCAGAAAAGAAAATCATAGCTATGCTGAGGTGGCAAGCATCTTGAAAATGGATGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAA ATGTTGCCTCCTAGGGCGTCAAGGAAGCGAAAGGAGGTTGAGCCGTTTGTGAAGCCAAAAGCTACGGGAGTCGACTCAGTCTCGTCGAATCAGCTTCTAGCCGGCTACCTTGCTCACGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCGAAGTGAAGCCGTTGGAATGACTAGCTCACAGCCATCTGAGTGTAAGAGGACGAAGCCGGAAGCCGCCGCCGCTGCCGCTCCGAGCGTCAGAAAAGAAAATCATAGCTATGCTGAGGTGGCAAGCATCTTGAAAATGGATGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAA ATGTTGCCTCCTAGGGCGTCAAGGAAGCGAAAGGAGGTTGAGCCGTTTGTGAAGCCAAAAGCTACGGGAGTCGACTCAGTCTCGTCGAATCAGCTTCTAGCCGGCTACCTTGCTCACGAGTTTCTCAGTAAAGGCACTTTGTTTGGGGAGAAGTATGAGCCGGCTCGAAGTGAAGCCGTTGGAATGACTAGCTCACAGCCATCTGAGTGTAAGAGGACGAAGCCGGAAGCCGCCGCCGCTGCCGCTCCGAGCGTCAGAAAAGAAAATCATAGCTATGCTGAGGTGGCAAGCATCTTGAAAATGGATGGGGCCCACTTGCCTGGGATTGTTAACCCGGCCCAGCTCGCTCGGTGGATTAAAATGTAA MLPPRASRKRKEVEPFVKPKATGVDSVSSNQLLAGYLAHEFLSKGTLFGEKYEPARSEAVGMTSSQPSECKRTKPEAAAAAAPSVRKENHSYAEVASILKMDGAHLPGIVNPAQLARWIKM Homology
BLAST of Cp4.1LG12g01300 vs. NCBI nr
Match: XP_023547636.1 (uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo] >XP_023547637.1 uncharacterized protein LOC111806520 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 234 bits (596), Expect = 3.53e-77 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. NCBI nr
Match: XP_023006321.1 (uncharacterized protein LOC111499092 [Cucurbita maxima]) HSP 1 Score: 224 bits (572), Expect = 1.51e-73 Identity = 118/121 (97.52%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. NCBI nr
Match: XP_022959091.1 (uncharacterized protein LOC111460190 [Cucurbita moschata]) HSP 1 Score: 221 bits (564), Expect = 3.05e-72 Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. NCBI nr
Match: KAG6574904.1 (hypothetical protein SDJN03_25543, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220 bits (561), Expect = 8.20e-72 Identity = 118/123 (95.93%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. NCBI nr
Match: KAG7013475.1 (hypothetical protein SDJN02_23641, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219 bits (557), Expect = 9.99e-70 Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. ExPASy TrEMBL
Match: A0A6J1KXG9 (uncharacterized protein LOC111499092 OS=Cucurbita maxima OX=3661 GN=LOC111499092 PE=4 SV=1) HSP 1 Score: 224 bits (572), Expect = 7.31e-74 Identity = 118/121 (97.52%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. ExPASy TrEMBL
Match: A0A6J1H3W4 (uncharacterized protein LOC111460190 OS=Cucurbita moschata OX=3662 GN=LOC111460190 PE=4 SV=1) HSP 1 Score: 221 bits (564), Expect = 1.48e-72 Identity = 118/125 (94.40%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. ExPASy TrEMBL
Match: A0A6J1HJY7 (uncharacterized protein LOC111464257 OS=Cucurbita moschata OX=3662 GN=LOC111464257 PE=4 SV=1) HSP 1 Score: 197 bits (500), Expect = 7.17e-63 Identity = 105/121 (86.78%), Postives = 110/121 (90.91%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. ExPASy TrEMBL
Match: A0A0A0LI65 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G173040 PE=4 SV=1) HSP 1 Score: 169 bits (428), Expect = 4.73e-52 Identity = 92/122 (75.41%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. ExPASy TrEMBL
Match: A0A5A7UAS9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold772G00360 PE=4 SV=1) HSP 1 Score: 166 bits (419), Expect = 1.11e-50 Identity = 90/122 (73.77%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. TAIR 10
Match: AT5G44060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 91.7 bits (226), Expect = 4.5e-19 Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. TAIR 10
Match: AT1G04000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44060.1); Has 62 Blast hits to 62 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 87.0 bits (214), Expect = 1.1e-17 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = 0
BLAST of Cp4.1LG12g01300 vs. TAIR 10
Match: AT3G23440.1 (embryo sac development arrest 6 ) HSP 1 Score: 86.7 bits (213), Expect = 1.4e-17 Identity = 49/116 (42.24%), Postives = 67/116 (57.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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