Cp4.1LG12g01140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG12g01140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description60S ribosomal protein L23
LocationCp4.1LG12: 766169 .. 771453 (+)
RNA-Seq ExpressionCp4.1LG12g01140
SyntenyCp4.1LG12g01140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTGAAACTTCATCTTTGCTGCTCCAGAATCCATTGTTCTTCCATTCTCTTTAAGTTTTAAGACGACCCGTTTTGTTAATTATCGTTGAGTTATGTTGCACGAGGTGAACGTCGGCGGCAGCGGTTCCGAATCAGAGCAAATGCATCCCACTGTAAGCATTTTACTCTTTAGTGTTTATTTTATTATATTCATGAGTGTTTGAATCAACCGGTTTGATATTGAGTTACCATTTTGATGAATGCCCATAAGGTATTTGATGAAATTCCCAGCTGCCATTTTTAGTTTTTTGTGCTTGAAAATTGGGTTTGAATTCTTTTTCTTGAGAAATCTTGTTGTTAGAGCATTTCTGGGTTGGATTCTTATTCAAGATATCGTGGTTGATGAGCATCTCATATGGATTTGATTTTTAAATTCTGTTTGTTTGTCCAATCTGGGAAGTTTTTACCACTAATTCAAGCAAATTTTGTACTCCATTAGCTTCTTGCTTTTCTTTTTTGCACTCCCACAGAGCACATGAGCATAAATGCACGTCTTTTTCAGCTTTGCACAACAAAAATGGAGCATTAGAGACCATTCTGGTTGGTTTAGATTGTTTTCACACTGTTCTTCTGCTTCTTTTACTGAGCTGCATATTTGAGAAGAAGAGGGGATTTATGTGCTTGTTTGTGTTGTTTTTATGTTTCCAATCTTCATGTTGTGAATATGAAGAATGGTGCGTCTTGCTTGTTCGAAACGAAGGTTGATTTTGGTGTAGTCGTGCCTAAGGGAATATCGGTAGAAGTAGATTCGTTCTTCTCGATCTATAAGAAACACCTCTTGTTCCCGTTTAGTCACCTTTCGTCCATCTTCTGGTTGTGAATATGAAGAATGGTGATTCTTGCTTGTTTGAAACGAAGGTTGATTTTTGTGTGGTCGTGTCGAAGGGAATATTGGTAGAAGTAGATTTGTTTTCTCGATCTATAAGAACCGCCTCTTGTTCCTGTTTAGTCCCGTTTCGTTTTTGGTTTATGTATGCATGATCATGGCGTAGAAGTTGATGTTGGTGTTTGATATTGTGTTTTCAGGAAGAAATCTCGAGTCCAATCAACGCTCAAATATATGATTTTTGTGATTCCGAGTTGTTCTCAGAGATGCTTCAAAACTCCGAGGAGTTCAATTCTTACTCGAATTGTTATTACGACAATAATTCATCATATGCTACAAATCTGCCTCATTCCCCAGATCAAGCAGATAACAATGGCAATGAAAATGGCAACACAGTCGTCGCTGCTCCATCGTTCGTACCGGCTAACGATGCATCGGCTACGACGAACATTACGACCAACAGTAATTTGACTACTATCTTTGATTGCCAAGAAGAACTTGACAATGATATCTCTGCTTCCATAGACTTCTCTCCATCGGATTCGTTTTCGATCGCTCAATATCTCACCATCCAGTCGGGGCAGTTCGACGTTTCTCAAGTGCAGTCTCAGATGCCATTACTAGATCCCATGATTGATGGGCTTCTCCAGTGTCCTATGGCTCCTGGAACTCTCATCGACGAAGAACTACCTTCGATTTACGTCGACGATTGTTTGTCTTCCTTCACTTCCTACATGCCATTGAATCCTTCCTCCCCTTCGTGCTCGTTCGTCGGAGCAACCATGCCAACTTACCTGCCTACGCCACCAATGAACCTCACTGCATCGTCGTCGTCGGTCGAAAATTGCGGTATGTTCCCGCTCCTCAGCGCAGAATTGCAACCACAAGACCTTGACTATCAAGGAGACAACTGTGGACTCTACAGCCAAGACTATATGCAGGGGACTTTCAATCCAGCAGACCTTCAGGTACTTAACTAACTAAAGTCTTTTCGAACATAACACGTCTTCGATAACGACAAACTAAACGATTCGACTCACGATCACGCTACGTTTTTGTTGTATATAGAAGGTACTCAGCGATGAGAATCTCCAACTGGCTGCTGGGGCAATGAACTGCACTTCATTAGCATCAGATCTCTCAAGCTTGAAGGACAGTACTTTCAAAGTTGGCAAACTCTCTGTGGAAGAGAGGAAGCAGAAGATTCATAGGTACATGAAGAAAAGAAATGAGAGGAACTTCAGCAAGAAAATCAAGGTCTTTTTTCCTCTCCATCTCTCCCCTTCCCCTCTTTATATTCAAACTCGAGACGTCGCTAACGATGGAGGCAAATTAACAGTACGCCTGCCGAAAAACGCTAGCAGATAGCCGCCCACGGGTTCGGGGACGGTTCGCCAAGAACGACGAATTGACAGAGACTCACAGGGTTGCTTGTAGCATCCATGAAGGAGAAGAAGAAGAAGAGGTAAAGCTTCTCTCTAAGCCAACTTTTCAAAAATCTCGGTTAGGAATCTCGACTCTCTACAATGGTACGATATTGTCCACTTTGAGCATAAGCTCTCGGGCCTTTGCTTTGGGCTTCCCCAAACGGCCTCATTCCAACGAAAATGTATTCCTTTACTTATAAACCCGACCAATGGCGTTCGTTTTGCAGGTAGTTGTGAAGGAAGAAGATAGCATGGTTGATTCTTCAGACATATTTGCTCATATCAGTGGAGTGAACTCGTTGAAACGCAGCTATCCAATCCAGTCTTGGATTTGATTTTATTTATTTTTTCTTAATTAAAAATAAATTTTTGAAAGAAAAAGAGAAAGAAACAACAATTTTGCAGGACCCAAAATACAAATATGAAGAGATATGTGGTAGAGAAAGAAATAGTGAAAAAGAAGGGTCGTAAATAGAAATAAGTTTTGAGTGAGGCCCCACCTAGCAATTAGAAACTTTTCAATTTGTAGATATTTCCATCAACAAATTCAAAATCCTTCATTTGTACATGTTAGGGGTTTGTGCCCTCAATGTTGCAATAAATTATATGTATATCTCCGAATTTAATTATAAAGCTCGGTCTCGATTTTGTTTCTTTTAAGGTTTCAATTATGTTCGGATTGTAAAATGAATAATCTACCGTTAGTTAAACATCGAGGTTTAACCATTTCAACTCAGTTACAAGAAACCCTTTTTACACTGACCCATGTGTTAAAAATCACGAACCTATCAATTTTGAGGTAGTAGTTATTTTTATCAACTAAATCATGCTCGGATTGCCAAATGGATAATCTACCATTAGTTAAACACGAGACTTTACCATCTCGACTCGATTACAACCAACCCTTTTTATAGTGATCCATGTATTGGGAACCACGAACTTCCACATAGTATGATATTGTCTGAACATAAGCTATGGTGTCTTTATTTTTTGTTTATCCAAATTTGGTCAGAGATAAAATAAGTAAAATTGCTCTAAATAAAATTATATATTCAATTTTAAATTTTAATTAAAAAGAAAAGAAAAAAAAAAAAACACAAAAAATCATAATTTAGCATAATTTAAAATTAATTGTAATTTTATTCGAATTTTTGGCCGTAAACAAACCCTAGGTCCCATCGTATATAAATGGCCATGAAAGATCTTAAGTTCCTCTCAGGTTCTCGTTTCAGCCGGCGAAAATGTCGAAGCGAGGTAAGCGAACCCTTGTGCCTCTCCTCTTCTTTCTTCGCAGTTTCACCATCTAGATTTTGGGATTAGGTTTCGTTTTCGTTCTTCCTGTGTTCATTTCTCGCCGGAAAATCATGTTCTTGTTTCATTTGCTTTGGAAGTACCCATTTTTGGGGGCTTTTTATTGAATCTGTATCGAATCCACAATTTACTAGTGGAGGAGTGATCGATTTTCCATGTGTGAACTCTGGAATGTGTATGATCGATCTGCTTCTTGTTGGTGCAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTTGGTCTACCGGTGGCAGCGACGGTGAATTGTGCTGACAACACTGGAGCTAAGAACCTGTACATCATCTCAGTGAAGGGTATCAAGGGGCGTTTGAACAGATTGCCATCGGCTTGTGTTGGAGATATGGTGATGGCCACTGTCAAGAAGGGAAAGCCCGATCTCAGGAAGAAGGTTCTTCCTGCCGTCATTGTCAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTCATGTACTTCGAAGGTATATAATACATATGTTTCTCTTGATAGGCTCCAAATTTGCTTGTTTTAGAGAGCACTATGGTACACATGTTTGATCTTGACCTGGATTTGCATTTGCCTGTTGACGTTTGCTATCTATCACGTTTTGTGTTTGAACTCTTATTTGTGTCTTCAGGTTTTTGTTATTACTGGTTGCCTTGCTGAATTGTGTTTGCTTGCAATTGTTCGAACCTGAGAATCCCATGATTAACACGTCTGTTGAAGCTAGATAGATGTTTTCATTCCATTTATTCTATATTTCTAATATGGTTCTGTGAGGAATAGATATCAAACATATCCGAGTTTTGAGTTGCATAGATGTATATTTTACTTTTCACTAGAAAGTAAAATCCAAAGCAACATGTTTTCTGTTAATTTGATTAAAAAGTACCCAAGTTCGTCGTCTGGACCCCATCTATTTTCCAGGCATAAGTCAGCTATCTTCCTTATTGTAATGGTTGAAACTGTTATGGGTCTTGTAATTTGACAGTCTTCATCATTGAAGATGTGTTGAAACTTTCATGCTCATATCCTCTGCTCCTTGTGGACATAACATTGTTGATTCAAAATAATTCCATTCTTGGTCTCATTCTGCCATTTTGTATGATATCATCCGTATAGAAATTTTGTTTTAATATACTTGTGTATATCACATGGGTATTTGATTTCGAAATGTATATTGTGGCTGCAGATAATGCAGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTATGACCCATTCGCCAGATGAAAATGCTCATTCTCCTAGTCTTTTAATCTTGCAAGGTTATGAAGTTCGTTTGTTGCTGCTGTTGCAGGTTCTGCAATCACAGGTCCCATCGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTTTAGTGTACGTCTATTAGAGTTCCATTCTTCTCGATTCTGTGGTTATAACACCTCGTAATTTTTTATATCCTAGTGGTTTCTTTAAATTACTCTCTTCCAATGCGAGATTTAATGGATCATTTTTGGGTCAATGAATTAGATTCTGAACTCGTAAGAAATTTCGTTCTTCATCTCTAATGACTTTGTGTTTTTAAGCTGCCTGATTGAGTGGCCATAGATGTGCCTAACCATTCATTACTAGCAATCATATCATTAATATTTTCCCCTTAT

mRNA sequence

ACTGAAACTTCATCTTTGCTGCTCCAGAATCCATTGTTCTTCCATTCTCTTTAAGTTTTAAGACGACCCGTTTTGTTAATTATCGTTGAGTTATGTTGCACGAGGTGAACGTCGGCGGCAGCGGTTCCGAATCAGAGCAAATGCATCCCACTGAAGAAATCTCGAGTCCAATCAACGCTCAAATATATGATTTTTGTGATTCCGAGTTGTTCTCAGAGATGCTTCAAAACTCCGAGGAGTTCAATTCTTACTCGAATTGTTATTACGACAATAATTCATCATATGCTACAAATCTGCCTCATTCCCCAGATCAAGCAGATAACAATGGCAATGAAAATGGCAACACAGTCGTCGCTGCTCCATCGTTCGTACCGGCTAACGATGCATCGGCTACGACGAACATTACGACCAACAGTAATTTGACTACTATCTTTGATTGCCAAGAAGAACTTGACAATGATATCTCTGCTTCCATAGACTTCTCTCCATCGGATTCGTTTTCGATCGCTCAATATCTCACCATCCAGTCGGGGCAGTTCGACGTTTCTCAAGTGCAGTCTCAGATGCCATTACTAGATCCCATGATTGATGGGCTTCTCCAGTGTCCTATGGCTCCTGGAACTCTCATCGACGAAGAACTACCTTCGATTTACGTCGACGATTGTTTGTCTTCCTTCACTTCCTACATGCCATTGAATCCTTCCTCCCCTTCGTGCTCGTTCGTCGGAGCAACCATGCCAACTTACCTGCCTACGCCACCAATGAACCTCACTGCATCGTCGTCGTCGGTCGAAAATTGCGGTATGTTCCCGCTCCTCAGCGCAGAATTGCAACCACAAGACCTTGACTATCAAGGAGACAACTGTGGACTCTACAGCCAAGACTATATGCAGGGGACTTTCAATCCAGCAGACCTTCAGGTACTCAGCGATGAGAATCTCCAACTGGCTGCTGGGGCAATGAACTGCACTTCATTAGCATCAGATCTCTCAAGCTTGAAGGACAGTACTTTCAAAGTTGGCAAACTCTCTGTGGAAGAGAGGAAGCAGAAGATTCATAGGTACATGAAGAAAAGAAATGAGAGGAACTTCAGCAAGAAAATCAAGTACGCCTGCCGAAAAACGCTAGCAGATAGCCGCCCACGGGTTCGGGGACGGTTCGCCAAGAACGACGAATTGACAGAGACTCACAGGCCGGCGAAAATGTCGAAGCGAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTTGGTCTACCGGTGGCAGCGACGGTGAATTGTGCTGACAACACTGGAGCTAAGAACCTGTACATCATCTCAGTGAAGGGTATCAAGGGGCGTTTGAACAGATTGCCATCGGCTTGTGTTGGAGATATGGTGATGGCCACTGTCAAGAAGGGAAAGCCCGATCTCAGGAAGAAGGTTCTTCCTGCCGTCATTGTCAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTCATGTACTTCGAAGATAATGCAGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTTCTGCAATCACAGGTCCCATCGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTTTAGTGTACGTCTATTAGAGTTCCATTCTTCTCGATTCTGTGGTTATAACACCTCGTAATTTTTTATATCCTAGTGGTTTCTTTAAATTACTCTCTTCCAATGCGAGATTTAATGGATCATTTTTGGGTCAATGAATTAGATTCTGAACTCGTAAGAAATTTCGTTCTTCATCTCTAATGACTTTGTGTTTTTAAGCTGCCTGATTGAGTGGCCATAGATGTGCCTAACCATTCATTACTAGCAATCATATCATTAATATTTTCCCCTTAT

Coding sequence (CDS)

ATGTTGCACGAGGTGAACGTCGGCGGCAGCGGTTCCGAATCAGAGCAAATGCATCCCACTGAAGAAATCTCGAGTCCAATCAACGCTCAAATATATGATTTTTGTGATTCCGAGTTGTTCTCAGAGATGCTTCAAAACTCCGAGGAGTTCAATTCTTACTCGAATTGTTATTACGACAATAATTCATCATATGCTACAAATCTGCCTCATTCCCCAGATCAAGCAGATAACAATGGCAATGAAAATGGCAACACAGTCGTCGCTGCTCCATCGTTCGTACCGGCTAACGATGCATCGGCTACGACGAACATTACGACCAACAGTAATTTGACTACTATCTTTGATTGCCAAGAAGAACTTGACAATGATATCTCTGCTTCCATAGACTTCTCTCCATCGGATTCGTTTTCGATCGCTCAATATCTCACCATCCAGTCGGGGCAGTTCGACGTTTCTCAAGTGCAGTCTCAGATGCCATTACTAGATCCCATGATTGATGGGCTTCTCCAGTGTCCTATGGCTCCTGGAACTCTCATCGACGAAGAACTACCTTCGATTTACGTCGACGATTGTTTGTCTTCCTTCACTTCCTACATGCCATTGAATCCTTCCTCCCCTTCGTGCTCGTTCGTCGGAGCAACCATGCCAACTTACCTGCCTACGCCACCAATGAACCTCACTGCATCGTCGTCGTCGGTCGAAAATTGCGGTATGTTCCCGCTCCTCAGCGCAGAATTGCAACCACAAGACCTTGACTATCAAGGAGACAACTGTGGACTCTACAGCCAAGACTATATGCAGGGGACTTTCAATCCAGCAGACCTTCAGGTACTCAGCGATGAGAATCTCCAACTGGCTGCTGGGGCAATGAACTGCACTTCATTAGCATCAGATCTCTCAAGCTTGAAGGACAGTACTTTCAAAGTTGGCAAACTCTCTGTGGAAGAGAGGAAGCAGAAGATTCATAGGTACATGAAGAAAAGAAATGAGAGGAACTTCAGCAAGAAAATCAAGTACGCCTGCCGAAAAACGCTAGCAGATAGCCGCCCACGGGTTCGGGGACGGTTCGCCAAGAACGACGAATTGACAGAGACTCACAGGCCGGCGAAAATGTCGAAGCGAGGGCGCGGAGGATCTGCAGGTAACAAGTTTAGGATGTCACTTGGTCTACCGGTGGCAGCGACGGTGAATTGTGCTGACAACACTGGAGCTAAGAACCTGTACATCATCTCAGTGAAGGGTATCAAGGGGCGTTTGAACAGATTGCCATCGGCTTGTGTTGGAGATATGGTGATGGCCACTGTCAAGAAGGGAAAGCCCGATCTCAGGAAGAAGGTTCTTCCTGCCGTCATTGTCAGGCAGCGCAAGCCATGGCGGCGAAAGGATGGGGTTTTCATGTACTTCGAAGATAATGCAGGAGTGATTGTGAACCCAAAAGGAGAAATGAAAGGTTCTGCAATCACAGGTCCCATCGGAAAGGAGTGTGCGGATTTATGGCCTAGGATCGCAAGTGCAGCCAATGCTATCGTTTAG

Protein sequence

MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDEELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTETHRPAKMSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV
Homology
BLAST of Cp4.1LG12g01140 vs. ExPASy Swiss-Prot
Match: P49690 (60S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3)

HSP 1 Score: 281.6 bits (719), Expect = 1.8e-74
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAIV 511
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

BLAST of Cp4.1LG12g01140 vs. ExPASy Swiss-Prot
Match: Q07760 (60S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 9.0e-74
Identity = 136/140 (97.14%), Postives = 139/140 (99.29%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGGSAGNKFRMSLGLPVAAT+NCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGSAGNKFRMSLGLPVAATINCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKPDLRKKV+PAV+VRQRKPWRRKDGVFMYFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVVVRQRKPWRRKDGVFMYFEDNAGVIVNAKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAIV 511
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

BLAST of Cp4.1LG12g01140 vs. ExPASy Swiss-Prot
Match: Q9XEK8 (60S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.3e-67
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGGS+GNKFRMSLGLPV A VNCADNTGAKNLY+IS  G++GRLNRLP+A VGDM
Sbjct: 1   MSKRGRGGSSGNKFRMSLGLPVGAVVNCADNTGAKNLYVIS-SGVRGRLNRLPAAAVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEM  SAITGP
Sbjct: 61  VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMNPSAITGP 120

Query: 491 IGKECADLWPRIASAANAIV 511
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 139

BLAST of Cp4.1LG12g01140 vs. ExPASy Swiss-Prot
Match: Q6PC14 (60S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 5.5e-63
Identity = 119/139 (85.61%), Postives = 129/139 (92.81%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLPSA VGDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPSAGVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAI 510
           + KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139

BLAST of Cp4.1LG12g01140 vs. ExPASy Swiss-Prot
Match: Q3T057 (60S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2)

HSP 1 Score: 242.3 bits (617), Expect = 1.2e-62
Identity = 118/139 (84.89%), Postives = 129/139 (92.81%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGGS+G KFR+SLGLPV A +NCADNTGAKNLYIISVKGIKGRLNRLP+A VGDM
Sbjct: 1   MSKRGRGGSSGAKFRISLGLPVGAVINCADNTGAKNLYIISVKGIKGRLNRLPAAGVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKP+LRKKV PAV++RQRK +RRKDGVF+YFEDNAGVIVN KGEMKGSAITGP
Sbjct: 61  VMATVKKGKPELRKKVHPAVVIRQRKSYRRKDGVFLYFEDNAGVIVNNKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAI 510
           + KECADLWPRIAS A +I
Sbjct: 121 VAKECADLWPRIASNAGSI 139

BLAST of Cp4.1LG12g01140 vs. NCBI nr
Match: XP_023548841.1 (uncharacterized protein LOC111807372 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 716 bits (1849), Expect = 6.53e-257
Identity = 368/370 (99.46%), Postives = 368/370 (99.46%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60
           MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN
Sbjct: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60

Query: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120
           NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL
Sbjct: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120

Query: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180
           DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID
Sbjct: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180

Query: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240
           EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP
Sbjct: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240

Query: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDL 300
           LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDL
Sbjct: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDL 300

Query: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360
           SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN
Sbjct: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360

Query: 361 DELTETHRPA 369
           DELTETHR A
Sbjct: 361 DELTETHRVA 370

BLAST of Cp4.1LG12g01140 vs. NCBI nr
Match: KAG6574893.1 (Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 706 bits (1822), Expect = 8.40e-253
Identity = 364/370 (98.38%), Postives = 365/370 (98.65%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60
           MLHEV VGGSGSESEQM PTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN
Sbjct: 1   MLHEVIVGGSGSESEQMLPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60

Query: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120
           NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL
Sbjct: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120

Query: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180
           DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID
Sbjct: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180

Query: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240
           E+LPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP
Sbjct: 181 EDLPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240

Query: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDL 300
           LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDL
Sbjct: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDL 300

Query: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360
           SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN
Sbjct: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360

Query: 361 DELTETHRPA 369
           DELTE HR A
Sbjct: 361 DELTENHRAA 370

BLAST of Cp4.1LG12g01140 vs. NCBI nr
Match: XP_022959242.1 (uncharacterized protein LOC111460284 isoform X3 [Cucurbita moschata])

HSP 1 Score: 706 bits (1821), Expect = 2.16e-252
Identity = 363/370 (98.11%), Postives = 365/370 (98.65%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60
           MLHEV VGGSGSESEQM PTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN
Sbjct: 1   MLHEVIVGGSGSESEQMLPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60

Query: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120
           NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL
Sbjct: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120

Query: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180
           DNDISASIDFSPSDSFSIAQYLTIQSGQFD+SQVQSQMPLLDPMIDGLLQCPMAPGTLID
Sbjct: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDISQVQSQMPLLDPMIDGLLQCPMAPGTLID 180

Query: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240
           E+LPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP
Sbjct: 181 EDLPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240

Query: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDL 300
           LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDL
Sbjct: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDL 300

Query: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360
           SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN
Sbjct: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360

Query: 361 DELTETHRPA 369
           DELTE HR A
Sbjct: 361 DELTENHRAA 370

BLAST of Cp4.1LG12g01140 vs. NCBI nr
Match: XP_023006076.1 (uncharacterized protein LOC111498929 isoform X5 [Cucurbita maxima])

HSP 1 Score: 703 bits (1814), Expect = 1.34e-251
Identity = 362/370 (97.84%), Postives = 363/370 (98.11%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60
           MLHEV VGGSGSESEQM PTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN
Sbjct: 1   MLHEVIVGGSGSESEQMLPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60

Query: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120
           NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL
Sbjct: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120

Query: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180
           DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGT ID
Sbjct: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTFID 180

Query: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240
           E+LPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLT SSSSVENCGMFP
Sbjct: 181 EDLPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTVSSSSVENCGMFP 240

Query: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDL 300
           LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDL
Sbjct: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDL 300

Query: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360
           SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN
Sbjct: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360

Query: 361 DELTETHRPA 369
           DELTE HR A
Sbjct: 361 DELTENHRAA 370

BLAST of Cp4.1LG12g01140 vs. NCBI nr
Match: KAG7013466.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 685 bits (1767), Expect = 9.99e-244
Identity = 364/414 (87.92%), Postives = 365/414 (88.16%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPT---------------------------------------- 60
           MLHEV VGGSGSESEQM PT                                        
Sbjct: 1   MLHEVIVGGSGSESEQMLPTNGASCLFERKVDFGVVVPKGISNGDSCLFEMKVDFCVVVP 60

Query: 61  ----EEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQAD 120
               EEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQAD
Sbjct: 61  KGISEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQAD 120

Query: 121 NNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSF 180
           NNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSF
Sbjct: 121 NNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSF 180

Query: 181 SIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDEELPSIYVDDCLSSFT 240
           SIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDE+LPSIYVDDCLSSFT
Sbjct: 181 SIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDEDLPSIYVDDCLSSFT 240

Query: 241 SYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGD 300
           SYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGD
Sbjct: 241 SYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGD 300

Query: 301 NCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVE 360
           NCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVE
Sbjct: 301 NCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVE 360

Query: 361 ERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTETHRPA 369
           ERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTE HR A
Sbjct: 361 ERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTENHRAA 414

BLAST of Cp4.1LG12g01140 vs. ExPASy TrEMBL
Match: A0A6J1H3Z8 (uncharacterized protein LOC111460284 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111460284 PE=4 SV=1)

HSP 1 Score: 706 bits (1821), Expect = 1.05e-252
Identity = 363/370 (98.11%), Postives = 365/370 (98.65%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60
           MLHEV VGGSGSESEQM PTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN
Sbjct: 1   MLHEVIVGGSGSESEQMLPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60

Query: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120
           NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL
Sbjct: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120

Query: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180
           DNDISASIDFSPSDSFSIAQYLTIQSGQFD+SQVQSQMPLLDPMIDGLLQCPMAPGTLID
Sbjct: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDISQVQSQMPLLDPMIDGLLQCPMAPGTLID 180

Query: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240
           E+LPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP
Sbjct: 181 EDLPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240

Query: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDL 300
           LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDL
Sbjct: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDL 300

Query: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360
           SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN
Sbjct: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360

Query: 361 DELTETHRPA 369
           DELTE HR A
Sbjct: 361 DELTENHRAA 370

BLAST of Cp4.1LG12g01140 vs. ExPASy TrEMBL
Match: A0A6J1KWS5 (uncharacterized protein LOC111498929 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111498929 PE=4 SV=1)

HSP 1 Score: 703 bits (1814), Expect = 6.46e-252
Identity = 362/370 (97.84%), Postives = 363/370 (98.11%), Query Frame = 0

Query: 1   MLHEVNVGGSGSESEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60
           MLHEV VGGSGSESEQM PTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN
Sbjct: 1   MLHEVIVGGSGSESEQMLPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDN 60

Query: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120
           NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL
Sbjct: 61  NSSYATNLPHSPDQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEEL 120

Query: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLID 180
           DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGT ID
Sbjct: 121 DNDISASIDFSPSDSFSIAQYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTFID 180

Query: 181 EELPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFP 240
           E+LPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLT SSSSVENCGMFP
Sbjct: 181 EDLPSIYVDDCLSSFTSYMPLNPSSPSCSFVGATMPTYLPTPPMNLTVSSSSVENCGMFP 240

Query: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ-VLSDENLQLAAGAMNCTSLASDL 300
           LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQ VLSDENLQLAAGAMNCTSLASDL
Sbjct: 241 LLSAELQPQDLDYQGDNCGLYSQDYMQGTFNPADLQKVLSDENLQLAAGAMNCTSLASDL 300

Query: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360
           SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN
Sbjct: 301 SSLKDSTFKVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKN 360

Query: 361 DELTETHRPA 369
           DELTE HR A
Sbjct: 361 DELTENHRAA 370

BLAST of Cp4.1LG12g01140 vs. ExPASy TrEMBL
Match: A0A6J1H5R8 (uncharacterized protein LOC111460284 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111460284 PE=4 SV=1)

HSP 1 Score: 677 bits (1748), Expect = 7.97e-242
Identity = 345/350 (98.57%), Postives = 348/350 (99.43%), Query Frame = 0

Query: 20  TEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG 79
           +EEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG
Sbjct: 24  SEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG 83

Query: 80  NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA 139
           NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA
Sbjct: 84  NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA 143

Query: 140 QYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDEELPSIYVDDCLSSFTSYM 199
           QYLTIQSGQFD+SQVQSQMPLLDPMIDGLLQCPMAPGTLIDE+LPSIYVDDCLSSFTSYM
Sbjct: 144 QYLTIQSGQFDISQVQSQMPLLDPMIDGLLQCPMAPGTLIDEDLPSIYVDDCLSSFTSYM 203

Query: 200 PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG 259
           PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG
Sbjct: 204 PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG 263

Query: 260 LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ 319
           LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ
Sbjct: 264 LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ 323

Query: 320 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTETHRPA 369
           KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTE HR A
Sbjct: 324 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTENHRAA 373

BLAST of Cp4.1LG12g01140 vs. ExPASy TrEMBL
Match: A0A6J1H4B0 (uncharacterized protein LOC111460284 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460284 PE=4 SV=1)

HSP 1 Score: 677 bits (1748), Expect = 1.49e-241
Identity = 345/350 (98.57%), Postives = 348/350 (99.43%), Query Frame = 0

Query: 20  TEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG 79
           +EEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG
Sbjct: 24  SEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG 83

Query: 80  NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA 139
           NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA
Sbjct: 84  NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA 143

Query: 140 QYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDEELPSIYVDDCLSSFTSYM 199
           QYLTIQSGQFD+SQVQSQMPLLDPMIDGLLQCPMAPGTLIDE+LPSIYVDDCLSSFTSYM
Sbjct: 144 QYLTIQSGQFDISQVQSQMPLLDPMIDGLLQCPMAPGTLIDEDLPSIYVDDCLSSFTSYM 203

Query: 200 PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG 259
           PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG
Sbjct: 204 PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG 263

Query: 260 LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ 319
           LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ
Sbjct: 264 LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ 323

Query: 320 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTETHRPA 369
           KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTE HR A
Sbjct: 324 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTENHRAA 373

BLAST of Cp4.1LG12g01140 vs. ExPASy TrEMBL
Match: A0A6J1KZ62 (uncharacterized protein LOC111498929 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111498929 PE=4 SV=1)

HSP 1 Score: 675 bits (1741), Expect = 9.25e-241
Identity = 344/350 (98.29%), Postives = 346/350 (98.86%), Query Frame = 0

Query: 20  TEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG 79
           +EEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG
Sbjct: 24  SEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSNCYYDNNSSYATNLPHSPDQADNNG 83

Query: 80  NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA 139
           NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA
Sbjct: 84  NENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSPSDSFSIA 143

Query: 140 QYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTLIDEELPSIYVDDCLSSFTSYM 199
           QYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGT IDE+LPSIYVDDCLSSFTSYM
Sbjct: 144 QYLTIQSGQFDVSQVQSQMPLLDPMIDGLLQCPMAPGTFIDEDLPSIYVDDCLSSFTSYM 203

Query: 200 PLNPSSPSCSFVGATMPTYLPTPPMNLTASSSSVENCGMFPLLSAELQPQDLDYQGDNCG 259
           PLNPSSPSCSFVGATMPTYLPTPPMNLT SSSSVENCGMFPLLSAELQPQDLDYQGDNCG
Sbjct: 204 PLNPSSPSCSFVGATMPTYLPTPPMNLTVSSSSVENCGMFPLLSAELQPQDLDYQGDNCG 263

Query: 260 LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ 319
           LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ
Sbjct: 264 LYSQDYMQGTFNPADLQVLSDENLQLAAGAMNCTSLASDLSSLKDSTFKVGKLSVEERKQ 323

Query: 320 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTETHRPA 369
           KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTE HR A
Sbjct: 324 KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDELTENHRAA 373

BLAST of Cp4.1LG12g01140 vs. TAIR 10
Match: AT1G04480.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-75
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAIV 511
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

BLAST of Cp4.1LG12g01140 vs. TAIR 10
Match: AT2G33370.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-75
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAIV 511
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

BLAST of Cp4.1LG12g01140 vs. TAIR 10
Match: AT3G04400.1 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 281.6 bits (719), Expect = 1.3e-75
Identity = 138/140 (98.57%), Postives = 140/140 (100.00%), Query Frame = 0

Query: 371 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 430
           MSKRGRGG++GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1   MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60

Query: 431 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 490
           VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61  VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120

Query: 491 IGKECADLWPRIASAANAIV 511
           IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140

BLAST of Cp4.1LG12g01140 vs. TAIR 10
Match: AT3G04400.2 (Ribosomal protein L14p/L23e family protein )

HSP 1 Score: 255.0 bits (650), Expect = 1.3e-67
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0

Query: 386 MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 445
           MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK
Sbjct: 1   MSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKK 60

Query: 446 VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 505
           VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA
Sbjct: 61  VLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASA 120

Query: 506 ANAIV 511
           ANAIV
Sbjct: 121 ANAIV 125

BLAST of Cp4.1LG12g01140 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 207.2 bits (526), Expect = 3.1e-53
Identity = 154/372 (41.40%), Postives = 205/372 (55.11%), Query Frame = 0

Query: 14  SEQMHPTEEISSPINAQIYDFCDSELFSEMLQNSEEFNSYSN-CYYDNNSSYATNLPHSP 73
           S +    +EI+SP+ AQI+DFCDS+LF E    + E  S SN C Y  N++   N P   
Sbjct: 8   SHEQLSMDEITSPLTAQIFDFCDSQLFQETFNQTSEVTSASNGCGYVENNN-TNNFPDKS 67

Query: 74  DQADNNGNENGNTVVAAPSFVPANDASATTNITTNSNLTTIFDCQEELDNDISASIDFSP 133
           +   N  +E+ N                      N++L+ IFD Q++ DNDI+ASIDFS 
Sbjct: 68  NSGSNQDHEDNN---------------------DNADLSIIFDSQDDFDNDITASIDFSS 127

Query: 134 SDSFSIAQYLTIQSGQFDVSQVQSQMP---LLDPMIDGLLQCPMAPGTLIDEELPSIYVD 193
           S  F  +  L     QFD + +Q   P   L       LL  P+           S++ +
Sbjct: 128 SIQFPASDQL---QEQFDFTGIQLHQPPNTLYSSSSGDLLPPPL-----------SVFEE 187

Query: 194 DCLSSFTSYM--PLNPSSPSCSFVGAT-MPTYLPTPPMNLTASSSSVENCGMFPLLSAEL 253
           DCLSS  SY    +NPSSPSCSF+G T +PTY+      +     S    G    L ++ 
Sbjct: 188 DCLSSVPSYNLGSINPSSPSCSFLGNTGLPTYMTVTGNMMNTGLGSGFYSGNIH-LGSDF 247

Query: 254 QP---QDLDYQGDNCGLYSQDYMQGTFNPAD-----LQVLSDENLQLAAGAMNCTSLASD 313
           +P   Q ++ Q DN GL+  D ++  FNP D     L  + ++N  +A   +    L ++
Sbjct: 248 KPSHDQLMEIQADNGGLFCPDPIKPIFNPGDHHLQGLDGVENQNHMVAQPVL--PQLGTE 307

Query: 314 LSSLKDSTF-KVGKLSVEERKQKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFA 370
           ++ L D +F KVGKLS E+RK+KIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFA
Sbjct: 308 ITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFA 340

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P496901.8e-7498.5760S ribosomal protein L23 OS=Arabidopsis thaliana OX=3702 GN=RPL23A PE=2 SV=3[more]
Q077609.0e-7497.1460S ribosomal protein L23 OS=Nicotiana tabacum OX=4097 GN=RPL23 PE=2 SV=1[more]
Q9XEK81.3e-6790.7160S ribosomal protein L23 OS=Syntrichia ruralis OX=38588 GN=RPL23 PE=2 SV=1[more]
Q6PC145.5e-6385.6160S ribosomal protein L23 OS=Danio rerio OX=7955 GN=rpl23 PE=2 SV=1[more]
Q3T0571.2e-6284.8960S ribosomal protein L23 OS=Bos taurus OX=9913 GN=RPL23 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
XP_023548841.16.53e-25799.46uncharacterized protein LOC111807372 isoform X3 [Cucurbita pepo subsp. pepo][more]
KAG6574893.18.40e-25398.38Zinc finger protein CONSTANS-LIKE 3, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022959242.12.16e-25298.11uncharacterized protein LOC111460284 isoform X3 [Cucurbita moschata][more]
XP_023006076.11.34e-25197.84uncharacterized protein LOC111498929 isoform X5 [Cucurbita maxima][more]
KAG7013466.19.99e-24487.92Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
Match NameE-valueIdentityDescription
A0A6J1H3Z81.05e-25298.11uncharacterized protein LOC111460284 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KWS56.46e-25297.84uncharacterized protein LOC111498929 isoform X5 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1H5R87.97e-24298.57uncharacterized protein LOC111460284 isoform X6 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1H4B01.49e-24198.57uncharacterized protein LOC111460284 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KZ629.25e-24198.29uncharacterized protein LOC111498929 isoform X4 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
AT1G04480.11.3e-7598.57Ribosomal protein L14p/L23e family protein [more]
AT2G33370.11.3e-7598.57Ribosomal protein L14p/L23e family protein [more]
AT3G04400.11.3e-7598.57Ribosomal protein L14p/L23e family protein [more]
AT3G04400.21.3e-67100.00Ribosomal protein L14p/L23e family protein [more]
AT1G04500.13.1e-5341.40CCT motif family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000218Ribosomal protein L14PSMARTSM01374Ribosomal_L14_2coord: 389..510
e-value: 3.2E-60
score: 216.1
IPR000218Ribosomal protein L14PPFAMPF00238Ribosomal_L14coord: 392..510
e-value: 1.6E-34
score: 118.5
IPR000218Ribosomal protein L14PHAMAPMF_01367Ribosomal_L14coord: 389..510
score: 19.384665
IPR036853Ribosomal protein L14 superfamilyGENE3D2.40.150.20Ribosomal protein L14coord: 371..510
e-value: 1.9E-54
score: 185.1
IPR036853Ribosomal protein L14 superfamilySUPERFAMILY50193Ribosomal protein L14coord: 381..510
IPR010402CCT domainPFAMPF06203CCTcoord: 317..359
e-value: 1.2E-18
score: 66.9
IPR010402CCT domainPROSITEPS51017CCTcoord: 317..359
score: 15.665881
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 357..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR31717ZINC FINGER PROTEIN CONSTANS-LIKE 10coord: 20..367
NoneNo IPR availablePANTHERPTHR31717:SF9CCT MOTIF FAMILY PROTEINcoord: 20..367
IPR019972Ribosomal protein L14P, conserved sitePROSITEPS00049RIBOSOMAL_L14coord: 449..475

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g01140.1Cp4.1LG12g01140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003735 structural constituent of ribosome