Cp4.1LG12g00180 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG12g00180
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProtein PXR1
LocationCp4.1LG12: 102440 .. 108818 (+)
RNA-Seq ExpressionCp4.1LG12g00180
SyntenyCp4.1LG12g00180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCTTTTTTTTTTTTTCAAAAAATACTATTCTCATTTCCTTATTATTTTTCCATTGATTTTGCCCTCGCAAACCTACGCACAATCGGAAGAGTTCCCTCTGGTCCTTTTCGGCGGCGGCGCTTGAAGCTGTACTCCGGTTTCCAACTCCAACGCAGGGTTGTAAATTTTATTCTCGAGAGATTAGGGGAGATGGGAGGCAAAGGACTACGGAGGAGAGAGCGGAATTACAGAGCCGCACATGGAGGCTATGATCGTCTCCCACCGCCGCCGAACGCTTCCCAAGTCGATACTCTACCTTCCAAACTCCGCAAATTAATGACCTTCACTTCCCCTCGTCCTCAAGGTTTGTTTATTTGTTTCTTTGTGTTTATTTGTTTGTCGATGAGTTTATTTAATTTCAGGCTATAATCTCCTCCCCTGGTGCTTACAGAGTCTGAGAAGGTCTCGGAGGATGTTCAGCGTAAGCGCAAGAGAGAAGCCGTTGATACTGAAAAGGTAATTGATATTGTCTTTAATTCTTCTCTGTCTCAGATTGGTACGTTTGCAGTTATCGGGTTTTACTTGAATTATTTTGTCTTAGGGCTTATACTGGACAAGGTGACAGGGGATTGGCATTGTATCATTTAGTATTTCAGTCTCTAACCAATGTTGTTGTTGTAAGTTCGGGTGCAAGAAAGTTGAGATTAGTATCACTAGGCATCCTAAGTATTTTCGTTTCATCATCTTCTTCTTTGGTTGCCGTTGCCCTTGTCTTACCGCGTACCTGGTTTGGCGTTAGAGTAGAAGATATCTATTAGTAGTTTCTATTTTGTTTAGTAAATGGCTTATTCTGTTATTTTATCCGGCGTGGTTACGAGGTTAAGCTTACTCCCCCTGAATGGGGATGCAAAATTTCTCGTGTTAAGTTTGCCTGCTTGAAGAGCTTGATAACGGCATTACATGCTTATAGTTTGTGTTACTCAGTTGTAGTTTGACTTCCACTTTCTATACAGAAATACCATCCAAAAGAAGCTCCGGGAAAATCTGACTTAAAGAGCAAAGGTCATGGTGGAAATTCACAAGTGCCTCAGCTTACGGGGAGTGATGATGACGTCCAAAGCAAGTCCAGTGAGAAGAAAAAGAAAAAACGAAAGAAAAAGCAGGTTACTGACCTTCGTTTTGAAGACTTGTCGGAGAATTCAAATCGACGTTTAAAGAAACGGGAACGCCAGAAAAAGTAAGCATTTTACTGCACCTCAAAAATTTGTTCCCTTACCTTTTGTGAGGTTGCATGTTTTTTTTACTATTGAGATGACTTGTTCATTTTGCATTTTTATTCCAATTACATCTCATTAAGTTTTGAACGTAATGCTTAAATGATGAAGAGAAATGTCCAGAAATTGCAATGTCCCAATGTTTTCCTTTTGGTAGTGACATAATTTGGCTATCTGAGAGGACCCTATCTACCTCATTTTTGTCAACTTGGTGCCCAAGGAAACTTTTGAGTAATTTGATTATACAAGGTGTTTATGATTTCAATCATAGCAATGTGATAGGCCGTAACGAGCCTTATGCGAGCAAGAGGCATCATGAAGTATTGCATGCACAAAGGAGACTAGTTAGAAGGGTTCATGGTTATTTCAGGGAGTGAGTAAAGGGGACTAGTTAGAAGGGAGAGGAGAACGAGGAAATTTTTTGTATGAGGGGAATATGTGCTTGAAGCGGAAAATCGGAGAGAAAGAAGTAGTAGGGCTAATTGATAGGGAAGCAATCTAAAAAAATTTATCCAAAAAGAGTTATTCAGGAGGATGGTTTTAGGAATAACCTTTAGGGCTGGTGTTGGAAATATTATTAAGGATATTAAGATATAAGGGTATATTAGGGAGGTGATGTAGGAAACAATTGTTTTGTTAGACTTTAGGTTTTTGAAGCGGTCTTTTCAAATATTTAACTATATTCTTCAAGTATTTCGAAAATATTTCTGTTCTATTTACTCTATCAATATTGGTACTAGAACACTTGACCTGGAAGTGAAAAAAAAATACTGGATGGAATAAAAAGTGACATTAGAGCAATCTCTCCAATCTGAGGCATTGAAATCGAAATTAATGGGGAAGAAACTATCTTAATTCATTTTAAGGAGCCTGCATGCAAACGAAAGACAATCAACCAATATTCAATCTGAAAGATTGTTGGCAGTTTCGAAATTAGAGCAATCGAATTGGCATCAAAATTGACACTGAGGGGGAAGAAACTATCTAAATTCATAAGGGCTTGCATGCAAACCATAGACAACCAACCAATATTCGATCTGAGAAATTGTTTGCAATTGCGAAGGAAGGATGATGGAGGGTTCTCAAAGGAAGCATATAAGGGAAGAATGAGGTTGGGTACCGAGTAAAAGCAAGGAATTTGTATGTAATTCAGAGAGATGAAAGGACTCTCAAATATAATTCCAATGTTTCAACCAGTTTTCTCATGGTTTTCTAGAAGTATATCCTAATCCTCTGGTTATTCAATTGAACTTTAGGCTATTACAAATTATGCACTAGTTATCTACCCATTTTCAGTATTCTAATCGTGGTCATTTCGATTGCATTTGTCATGTACCATGTTATAGTAGGTCTATTGTAGAAACTTGGTGAACTGGGAAGCATTTGTTCCCTTTTTTTAACTGATCCATTACGTTTATTTCTAAATAGATATCACGAGGCTAAGAAAAATAAACACAAGAAAGGCAAGACAGACGAGGATCTAGACTTCCCAAGACATGAAAAAATAAAATTTGGTGACGTGGTTGAAGCTCCATTGAAGTTGACTGCAGTTCCGAAGGTAACATCTAACTCTACATGGTCAAGTTAAATGATAAATGAACACTCCGATTTGGGTACTTGACAATTTTGTTGTTCCTATGTTTCATATAGGCGTTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGATTGCAGGCTATAACTGAATATAGAAACCGCAAGGGATGGACCTCAAGGCCAGGGTTGCAAATACCTTCAATGACTATATCACCAGCTGTTTAATTGTAAGTTTACGATCATTCCGTTCCCTTTGTTTCCTTTTACAAGAGTCTGAACTACATTTAGTTGTTAAAGCTTAGCCTCTTAATTTTCTGAAGTATATACAATCAATAGAAACAAACTGTGACAGTGTGGCTGTATTTGGATTCTAATTTACCTTCTATGCTTTCATCACATTGTTTTAAGATCTATGCTATCATCTCATTGCTTTTAAGTCTCAAAGTTAACATTACCTTTCACATTTTATGCATCGTGATGAATATTGGTTAAATTTTTTAAAAAATTATCCTTCAATTATCCCTATAAATCTATACTTAAAAAGAAATTACAATATTTTACTTCATTTTTAGAAACTTTTCAAAATTACTATTGAAGTAGAAATCTCTTAGAATTTGTTTCAAGTTTCATTTTAGTATAATTTTGAAACAATGATTATGTAATGTCGAGAGTTTTAATATTGTAACTTTTAAAAGTATAGGTCAAGAGTTTTAATATTGTAACTTTTAAAAGTATAGGTGTACTTATGAAACTAGGGACAATTTTTTCTTTCATAATTTAGCCATGAATATTTGAAACTAAGATATATAATGCATTGTGTGTCTGTTTGCTAGAATATGACATCTTTTGAAAATTATTTTGAGCTACTCTTCCAAAACAACCTGGAAAACTTGAAATAGAATCGTGATGAAACTCTTTTTGAACTGGCATCTTTGAATAGCTCAGCATTCTTAGTTGGCAGCTGGATTTGCATTAATGGTGGTGGTTGTGTTGGGGCAGCAGCAGATTTTGTTCCATTAGGGGTGCGATAAGCTGGCAATGGGATTCTCTCGCCGCATCACTAGCCCCAAAGAGGAGTTGCTGGAGAGTTATCAGAATGTTGTCTAAAAGGGAAGATTTGTTCTATAAATTACCAAGCAATCAACTCAGAAACCAAAGGTCAGATTCTGAAAATCTTATCAGAAACAGATTCTGTGACGAAAGCTAACCCCATCTTATGCTCTTCTTTTACTTCATATGAGATTAATAGGTTTCTTATGGATCCAATGTTTTCTTTTTATCGTTTATTGATATGTATGAATTTGATAAAACATTAGGTATTTCTAATTGAATTATAATGGTAAAATTTCTAGTACATATGTTTCAATTGTGCTTCTAGATTTTGGAATTTTTCAATATAATCTTTAATTTTGATGTAAAATTGATGTGGCAATTGATACTAGAGTTAGAAAAAAATAACATTGACATTGTTTATAATATTAATTTAAATTCTAAATGGCTCTTTGAATCTATGTAAAATATTTTATATGATATGAGAAAGTTAATTCTTAGTATTATTATTAGATTATGTGGCATCTTTTCCTTTAAACCTATGGTATCTCTCTTTTTATAAAACCATTTATGTTAAGCTTTAGGAACTAATATAATTACAACTTAAGCATAAATTGAAACCAAAGTATTGTTTACTAAAAATAATAATAATAATAGTAAAACATTTCACAACAAAATTCAAACTTTCAGAATAATTAAAATGAAACAGAAAAAAAAAAAAAGAACTCCCACCAAAAAACCAAACTCTCAACGTTCTTCTCTGTTTACCGTTAGTAATGTGACCGTTGACCCCGCCCCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTAACTATTGCAAGTGGTAAGCTCAGGGACAAGAGGGTAATTTCGCCTAAAGTAAGAGAAAGCAAGAAGCCACCTCTGTGCCATACGCCAAGCACATAAACCACTTTTGTTATTTCCAGCTGTGTACAAAAGCGCCTTGCCTCCTTTATCCTACATTCCCCAAAATACCCTTAACTGTAGTTAACTTCCCTCTAACCCTAGTTAGCTAACTTAACTACTCTCCCTTTTATACCCTCTCCACTCCCTTAAACCCCCGTTCTTTCCTACTCCTCCTCCGTCTGTTTCTCCTCTCCCTTCTCCCATGGCGGCCTCCAAATCCCTTTTCTTCTTCCTCGCCCTCGCCGCAGCCACCGCCGTCTCCGCCCACAATATTACCGACATTCTTAAGGATTTCCCGGAGTATAGCGATTACAGCAACTACCTGCAGCAGACCAGACTCGCCGACGAGATTAACAGCCGGCAGACTATCACCATCCTCGTTGTCTCCAATGGCGCTCTCTCCTCCGTTGTGGCCAAACATCCTCTCTCCGTCATCAAAAACTTCCTCAGTCTCCACATTGTCCTGGACTACTACGATCCTGCCAAACTCCACAAGATCTCCAACGGAACCACTCTCTCGACCACGCTCTACCAGACAACTGGCCACGCGCCTGGAAATCTAGGTTTCGTGAACATTACCGATCTCCAGGGCGGTAAGGTCGCATTCGGCTCCGCTGCGCCTGGATCTAAACTCGATTCGAGTTACACGAAGTCGGTTAAGCAGATTCCTTACAACATTTCGGTTATTGAGATCAGTGCGCCGATCATCGCGCCGGGGATTTTGACGGCTCCGGCTCCATCGGCTTCCGATGTTAACATCACGGCTTTGCTCGAGAAAGCCGGATGTAAGACGTTTGCGTCGCTGCTTGTTTCGAATGGTGTGATCAAGACTTACGAATCGGCGGTTGAGAAAGGATTGACCATATTTGCGCCAAACGACGAAGCGTTCAAGGCAGACGGAGTTCCAGATCTGAGTAAACTCACGAATGCTGAAGTTGTTTCGCTTCTTCTATACCATGCTCTGGCCGCTTACTCTCCCATCGGCGCCTTGAAGACGACCAAGGATCCAATCGACACTCTGGCTACTAGCGGTGCCGGCAAGTTCGACATTACGACGACTACGGCTGGAGATGCGGTTACTCTCCATACAGGAGTTGGATCCTCGAGAATCGCCGATACAGTCCTCGACGCGACTCCGCTCGCTATTTTCAGCGTCGATAGTCTGTTACTTCCTTCGGAGTTGTTCGGAAAGTCTCCTTCGCCTGCGCCAGCACCTGAACCTGTGAGCTCTCCTACCCCGACGCCGTCTCTGGCTCCAAGTCCGAGCCCTAGCGCGAAGGCTCCGTCTCCGTTCGCCGCGTCCCCGCCTGCTCCTCCTTCCGAGACGCCGGAAGGTTCGCCGGCCAATGCACCTAGCGCTGAGGCGCAAACCAGTACTCCTGGAAGCTCCGCCGTTCACGTGAAAGCTTCCGCCGTTGTCGTTGTCGCCGCCGTTGCTACCACCATGTTTTCCTCTCTACTCTTGTCCTAAATCGTAATTCTCCTCTAGCATCAGTCTCTTCGTTTATTTTATTTTTGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

AATTCTTTTTTTTTTTTTCAAAAAATACTATTCTCATTTCCTTATTATTTTTCCATTGATTTTGCCCTCGCAAACCTACGCACAATCGGAAGAGTTCCCTCTGGTCCTTTTCGGCGGCGGCGCTTGAAGCTGTACTCCGGTTTCCAACTCCAACGCAGGGTTGTAAATTTTATTCTCGAGAGATTAGGGGAGATGGGAGGCAAAGGACTACGGAGGAGAGAGCGGAATTACAGAGCCGCACATGGAGGCTATGATCGTCTCCCACCGCCGCCGAACGCTTCCCAAGTCGATACTCTACCTTCCAAACTCCGCAAATTAATGACCTTCACTTCCCCTCGTCCTCAAGAGTCTGAGAAGGTCTCGGAGGATGTTCAGCGTAAGCGCAAGAGAGAAGCCGTTGATACTGAAAAGAAATACCATCCAAAAGAAGCTCCGGGAAAATCTGACTTAAAGAGCAAAGGTCATGGTGGAAATTCACAAGTGCCTCAGCTTACGGGGAGTGATGATGACGTCCAAAGCAAGTCCAGTGAGAAGAAAAAGAAAAAACGAAAGAAAAAGCAGGTTACTGACCTTCGTTTTGAAGACTTGTCGGAGAATTCAAATCGACGTTTAAAGAAACGGGAACGCCAGAAAAAATATCACGAGGCTAAGAAAAATAAACACAAGAAAGGCAAGACAGACGAGGATCTAGACTTCCCAAGACATGAAAAAATAAAATTTGGTGACGTGGTTGAAGCTCCATTGAAGTTGACTGCAGTTCCGAAGGCGTTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGATTGCAGGCTATAACTGAATATAGAAACCGCAAGGGATGGACCTCAAGGCCAGGGTTGCAAATACCTTCAATGACTATATCACCAGCTGTTTAATTCTCAGCATTCTTAGTTGGCAGCTGGATTTGCATTAATGGTGGTGGTTGTGTTGGGGCAGCAGCAGATTTTGTTCCATTAGGGGTGCGATAAGCTGGCAATGGGATTCTCTCGCCGCATCACTAGCCCCAAAGAGGAGTTGCTGGAGAGTTATCAGAATGTTGTCTAAAAGGGAAGATTTGTTCTATAAATTACCAAGCAATCAACTCAGAAACCAAAGGTCAGATTCTGAAAATCTTATCAGAAACAGATTCTGTGACGAAAGCTAACCCCATCTTATGCTCTTCTTTTACTTCATATGAGATTAATAGGTTTCTTATGGATCCAATGTTTTCTTTTTATCGTTTATTGATATGTATGAATTTGATAAAACATTAGGTATTTCTAATTGAATTATAATGGTAAAATTTCTAGTACATATGTTTCAATTGTGCTTCTAGATTTTGGAATTTTTCAATATAATCTTTAATTTTGATGTAAAATTGATGTGGCAATTGATACTAGAGTTAGAAAAAAATAACATTGACATTGTTTATAATATTAATTTAAATTCTAAATGGCTCTTTGAATCTATGTAAAATATTTTATATGATATGAGAAAGTTAATTCTTAGTATTATTATTAGATTATGTGGCATCTTTTCCTTTAAACCTATGGTATCTCTCTTTTTATAAAACCATTTATGTTAAGCTTTAGGAACTAATATAATTACAACTTAAGCATAAATTGAAACCAAAGTATTGTTTACTAAAAATAATAATAATAATAGTAAAACATTTCACAACAAAATTCAAACTTTCAGAATAATTAAAATGAAACAGAAAAAAAAAAAAAGAACTCCCACCAAAAAACCAAACTCTCAACGTTCTTCTCTGTTTACCGTTAGTAATGTGACCGTTGACCCCGCCCCCCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANTAACTATTGCAAGTGGTAAGCTCAGGGACAAGAGGGTAATTTCGCCTAAAGTAAGAGAAAGCAAGAAGCCACCTCTGTGCCATACGCCAAGCACATAAACCACTTTTGTTATTTCCAGCTGTGTACAAAAGCGCCTTGCCTCCTTTATCCTACATTCCCCAAAATACCCTTAACTGTAGTTAACTTCCCTCTAACCCTAGTTAGCTAACTTAACTACTCTCCCTTTTATACCCTCTCCACTCCCTTAAACCCCCGTTCTTTCCTACTCCTCCTCCGTCTGTTTCTCCTCTCCCTTCTCCCATGGCGGCCTCCAAATCCCTTTTCTTCTTCCTCGCCCTCGCCGCAGCCACCGCCGTCTCCGCCCACAATATTACCGACATTCTTAAGGATTTCCCGGAGTATAGCGATTACAGCAACTACCTGCAGCAGACCAGACTCGCCGACGAGATTAACAGCCGGCAGACTATCACCATCCTCGTTGTCTCCAATGGCGCTCTCTCCTCCGTTGTGGCCAAACATCCTCTCTCCGTCATCAAAAACTTCCTCAGTCTCCACATTGTCCTGGACTACTACGATCCTGCCAAACTCCACAAGATCTCCAACGGAACCACTCTCTCGACCACGCTCTACCAGACAACTGGCCACGCGCCTGGAAATCTAGGTTTCGTGAACATTACCGATCTCCAGGGCGGTAAGGTCGCATTCGGCTCCGCTGCGCCTGGATCTAAACTCGATTCGAGTTACACGAAGTCGGTTAAGCAGATTCCTTACAACATTTCGGTTATTGAGATCAGTGCGCCGATCATCGCGCCGGGGATTTTGACGGCTCCGGCTCCATCGGCTTCCGATGTTAACATCACGGCTTTGCTCGAGAAAGCCGGATGTAAGACGTTTGCGTCGCTGCTTGTTTCGAATGGTGTGATCAAGACTTACGAATCGGCGGTTGAGAAAGGATTGACCATATTTGCGCCAAACGACGAAGCGTTCAAGGCAGACGGAGTTCCAGATCTGAGTAAACTCACGAATGCTGAAGTTGTTTCGCTTCTTCTATACCATGCTCTGGCCGCTTACTCTCCCATCGGCGCCTTGAAGACGACCAAGGATCCAATCGACACTCTGGCTACTAGCGGTGCCGGCAAGTTCGACATTACGACGACTACGGCTGGAGATGCGGTTACTCTCCATACAGGAGTTGGATCCTCGAGAATCGCCGATACAGTCCTCGACGCGACTCCGCTCGCTATTTTCAGCGTCGATAGTCTGTTACTTCCTTCGGAGTTGTTCGGAAAGTCTCCTTCGCCTGCGCCAGCACCTGAACCTGTGAGCTCTCCTACCCCGACGCCGTCTCTGGCTCCAAGTCCGAGCCCTAGCGCGAAGGCTCCGTCTCCGTTCGCCGCGTCCCCGCCTGCTCCTCCTTCCGAGACGCCGGAAGGTTCGCCGGCCAATGCACCTAGCGCTGAGGCGCAAACCAGTACTCCTGGAAGCTCCGCCGTTCACGTGAAAGCTTCCGCCGTTGTCGTTGTCGCCGCCGTTGCTACCACCATGTTTTCCTCTCTACTCTTGTCCTAAATCGTAATTCTCCTCTAGCATCAGTCTCTTCGTTTATTTTATTTTTGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGGAGGCAAAGGACTACGGAGGAGAGAGCGGAATTACAGAGCCGCACATGGAGGCTATGATCGTCTCCCACCGCCGCCGAACGCTTCCCAAGTCGATACTCTACCTTCCAAACTCCGCAAATTAATGACCTTCACTTCCCCTCGTCCTCAAGAGTCTGAGAAGGTCTCGGAGGATGTTCAGCGTAAGCGCAAGAGAGAAGCCGTTGATACTGAAAAGAAATACCATCCAAAAGAAGCTCCGGGAAAATCTGACTTAAAGAGCAAAGGTCATGGTGGAAATTCACAAGTGCCTCAGCTTACGGGGAGTGATGATGACGTCCAAAGCAAGTCCAGTGAGAAGAAAAAGAAAAAACGAAAGAAAAAGCAGGTTACTGACCTTCGTTTTGAAGACTTGTCGGAGAATTCAAATCGACGTTTAAAGAAACGGGAACGCCAGAAAAAATATCACGAGGCTAAGAAAAATAAACACAAGAAAGGCAAGACAGACGAGGATCTAGACTTCCCAAGACATGAAAAAATAAAATTTGGTGACGTGGTTGAAGCTCCATTGAAGTTGACTGCAGTTCCGAAGGCGTTTAAATCTGCACAAGTTGCTTCTCAAGAGAGGAAGCGATTGCAGGCTATAACTGAATATAGAAACCGCAAGGGATGGACCTCAAGGCCAGGGTTGCAAATACCTTCAATGACTATATCACCAGCTGTTTAA

Protein sequence

MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDVQRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRKKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVVEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Homology
[Close]
BLAST of Cp4.1LG12g00180 vs. NCBI nr
Match: XP_023547832.1 (protein PXR1 [Cucurbita pepo subsp. pepo] >XP_023547833.1 protein PXR1 [Cucurbita pepo subsp. pepo] >XP_023547834.1 protein PXR1 [Cucurbita pepo subsp. pepo] >XP_023547835.1 protein PXR1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 441 bits (1134), Expect = 1.30e-155
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK 120
           QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK
Sbjct: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK 120

Query: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180
           KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV
Sbjct: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Sbjct: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235

[Close]
BLAST of Cp4.1LG12g00180 vs. NCBI nr
Match: XP_022959194.1 (uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959195.1 uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959196.1 uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959197.1 uncharacterized protein LOC111460256 [Cucurbita moschata])

HSP 1 Score: 433 bits (1113), Expect = 2.07e-152
Identity = 231/235 (98.30%), Postives = 233/235 (99.15%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK 120
           QRKRKREAVDTEKKYHPKEAPGKSDLKSKG+GGNSQ+PQLTGSDDDVQSK SEKK KKRK
Sbjct: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSDDDVQSKFSEKKNKKRK 120

Query: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180
           KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV
Sbjct: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Sbjct: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235

[Close]
BLAST of Cp4.1LG12g00180 vs. NCBI nr
Match: KAG6574789.1 (hypothetical protein SDJN03_25428, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 432 bits (1112), Expect = 2.94e-152
Identity = 230/235 (97.87%), Postives = 234/235 (99.57%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK 120
           QRKRKREAVDTEKKYHPKEAPGKSDLKS+G+GGNSQ+PQLTGSDDDVQSKSSEKK KKRK
Sbjct: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSEGNGGNSQMPQLTGSDDDVQSKSSEKKNKKRK 120

Query: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180
           KKQVTDLRFEDLSENSNRRLKKRERQ+KYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV
Sbjct: 121 KKQVTDLRFEDLSENSNRRLKKRERQRKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Sbjct: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235

[Close]
BLAST of Cp4.1LG12g00180 vs. NCBI nr
Match: XP_023006093.1 (probable H/ACA ribonucleoprotein complex subunit 4 [Cucurbita maxima] >XP_023006094.1 probable H/ACA ribonucleoprotein complex subunit 4 [Cucurbita maxima] >XP_023006095.1 probable H/ACA ribonucleoprotein complex subunit 4 [Cucurbita maxima] >XP_023006097.1 probable H/ACA ribonucleoprotein complex subunit 4 [Cucurbita maxima])

HSP 1 Score: 423 bits (1088), Expect = 1.39e-148
Identity = 228/236 (96.61%), Postives = 233/236 (98.73%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLM+FTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMSFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDT-EKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKR 120
           QRKRKREAVDT EKKYHPKEAPGKSDLKSKG+GGNSQ+PQLTGSDDDVQSKS+EKK KKR
Sbjct: 61  QRKRKREAVDTTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSDDDVQSKSTEKKNKKR 120

Query: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDV 180
           KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKG +DEDLDFPRHEKIKFGDV
Sbjct: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGISDEDLDFPRHEKIKFGDV 180

Query: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Sbjct: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 236

[Close]
BLAST of Cp4.1LG12g00180 vs. NCBI nr
Match: KAG7013369.1 (hypothetical protein SDJN02_23533 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 422 bits (1086), Expect = 5.16e-148
Identity = 231/253 (91.30%), Postives = 234/253 (92.49%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDTEK------------------KYHPKEAPGKSDLKSKGHGGNSQVPQLTG 120
           QRKRKREAVDTEK                  KYHPKEAPGKSDLKS+G+GGNSQ+PQLTG
Sbjct: 61  QRKRKREAVDTEKRGYEVKLTPPEWGCKISRKYHPKEAPGKSDLKSEGNGGNSQMPQLTG 120

Query: 121 SDDDVQSKSSEKKKKKRKKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKT 180
           SDDDVQSKSSEKK KKRKKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKT
Sbjct: 121 SDDDVQSKSSEKKNKKRKKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKT 180

Query: 181 DEDLDFPRHEKIKFGDVVEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRP 235
           DEDLDFPRHEKIKFGDVVEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRP
Sbjct: 181 DEDLDFPRHEKIKFGDVVEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRP 240

[Close]
BLAST of Cp4.1LG12g00180 vs. ExPASy TrEMBL
Match: A0A6J1H3V7 (uncharacterized protein LOC111460256 OS=Cucurbita moschata OX=3662 GN=LOC111460256 PE=4 SV=1)

HSP 1 Score: 433 bits (1113), Expect = 1.00e-152
Identity = 231/235 (98.30%), Postives = 233/235 (99.15%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK 120
           QRKRKREAVDTEKKYHPKEAPGKSDLKSKG+GGNSQ+PQLTGSDDDVQSK SEKK KKRK
Sbjct: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSDDDVQSKFSEKKNKKRK 120

Query: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180
           KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV
Sbjct: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Sbjct: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235

[Close]
BLAST of Cp4.1LG12g00180 vs. ExPASy TrEMBL
Match: A0A6J1KUZ8 (probable H/ACA ribonucleoprotein complex subunit 4 OS=Cucurbita maxima OX=3661 GN=LOC111498941 PE=4 SV=1)

HSP 1 Score: 423 bits (1088), Expect = 6.72e-149
Identity = 228/236 (96.61%), Postives = 233/236 (98.73%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLM+FTSPRPQESEKVSEDV
Sbjct: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMSFTSPRPQESEKVSEDV 60

Query: 61  QRKRKREAVDT-EKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKR 120
           QRKRKREAVDT EKKYHPKEAPGKSDLKSKG+GGNSQ+PQLTGSDDDVQSKS+EKK KKR
Sbjct: 61  QRKRKREAVDTTEKKYHPKEAPGKSDLKSKGNGGNSQMPQLTGSDDDVQSKSTEKKNKKR 120

Query: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDV 180
           KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKG +DEDLDFPRHEKIKFGDV
Sbjct: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGISDEDLDFPRHEKIKFGDV 180

Query: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV
Sbjct: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 236

[Close]
BLAST of Cp4.1LG12g00180 vs. ExPASy TrEMBL
Match: A0A5A7TEP7 (Protein PXR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002900 PE=4 SV=1)

HSP 1 Score: 357 bits (917), Expect = 7.30e-123
Identity = 197/235 (83.83%), Postives = 215/235 (91.49%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKG+RRRERNYRAAHGGYDRLPPPP+ SQ DTLPSKLRKLM+FTS R QESE VSED+
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDI 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSD-DDVQSKSSEKKKKKR 120
           QRKRKR+AV+TEKK + K+A G+SD+KSK +GGNSQ+PQ TGSD DDVQSKSSEKK KKR
Sbjct: 61  QRKRKRDAVNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDVDDVQSKSSEKKNKKR 120

Query: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDV 180
           K+KQVTDLRFED  E S+RRLKKRER+KKY EAKKNKHKK KT+E LDFPRHEKIKFGDV
Sbjct: 121 KRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEKIKFGDV 180

Query: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPA 234
           VEAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRKGWTSRPG+QIPSMTI+PA
Sbjct: 181 VEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPA 234

[Close]
BLAST of Cp4.1LG12g00180 vs. ExPASy TrEMBL
Match: A0A1S4E2Q2 (LOW QUALITY PROTEIN: protein PXR1 OS=Cucumis melo OX=3656 GN=LOC103499034 PE=4 SV=1)

HSP 1 Score: 352 bits (904), Expect = 6.96e-121
Identity = 195/235 (82.98%), Postives = 213/235 (90.64%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKG+RRRERNYRAAHGGYDRLPPPP+ SQ DTLPSKLRKLM+FTS R QESE VSED+
Sbjct: 1   MGGKGMRRRERNYRAAHGGYDRLPPPPDTSQADTLPSKLRKLMSFTSSRSQESE-VSEDL 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSD-DDVQSKSSEKKKKKR 120
           QRKRKR+A +TEKK + K+A G+SD+KSK +GGNSQ+PQ TGSD DDVQSKSSEKK KKR
Sbjct: 61  QRKRKRDAFNTEKKSNQKDASGRSDVKSKANGGNSQMPQRTGSDIDDVQSKSSEKKNKKR 120

Query: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDV 180
           K+KQVTDLRFED  E S+RRLKKRER+KKY EAKKNKHKK KT+E LDFPRHE IKFGDV
Sbjct: 121 KRKQVTDLRFEDSLEESSRRLKKRERRKKYQEAKKNKHKKAKTEEVLDFPRHEXIKFGDV 180

Query: 181 VEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPA 234
           VEAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRKGWTSRPG+QIPSMTI+PA
Sbjct: 181 VEAPLKLLAVPKAFKSAQVASQERKRLQAINEYRNRKGWTSRPGIQIPSMTIAPA 234

[Close]
BLAST of Cp4.1LG12g00180 vs. ExPASy TrEMBL
Match: A0A6J1DLN3 (DNA ligase 1 OS=Momordica charantia OX=3673 GN=LOC111021190 PE=4 SV=1)

HSP 1 Score: 346 bits (888), Expect = 1.90e-118
Identity = 186/235 (79.15%), Postives = 212/235 (90.21%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEKVSEDV 60
           MGGKG RRRERNYRAAHG YDRLPPPP++S++D LPSKLRKLM+FTS R QESEKV +D 
Sbjct: 1   MGGKGQRRRERNYRAAHGTYDRLPPPPDSSKLDALPSKLRKLMSFTSSRDQESEKVLKDT 60

Query: 61  QRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKRK 120
           Q KRK+EAV +EKK HP++A G++D+K++G+GGNS++PQLT S DD+QSKSSEKK KKRK
Sbjct: 61  QDKRKKEAVSSEKKSHPEDARGRTDVKNEGNGGNSEMPQLTDSGDDMQSKSSEKKDKKRK 120

Query: 121 KKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDLDFPRHEKIKFGDVV 180
           +KQV DLRFE+L+  SNRRLKKRER+KK+ EAKKNKHKK KT+EDLDFPRHEKIKFGDVV
Sbjct: 121 RKQVNDLRFEELAGESNRRLKKRERRKKFQEAKKNKHKKPKTEEDLDFPRHEKIKFGDVV 180

Query: 181 EAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSMTISPAV 235
           EAPLKL AVPKAFKSAQVASQERKRLQAI EYRNRK WTSRPG+QIPSM ISPAV
Sbjct: 181 EAPLKLVAVPKAFKSAQVASQERKRLQAINEYRNRKAWTSRPGIQIPSMGISPAV 235

[Close]
BLAST of Cp4.1LG12g00180 vs. TAIR 10
Match: AT2G45520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 260 Blast hits to 238 proteins in 75 species: Archae - 0; Bacteria - 6; Metazoa - 94; Fungi - 40; Plants - 38; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). )

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-46
Identity = 119/232 (51.29%), Postives = 148/232 (63.79%), Query Frame = 0 

Query: 1   MGGKGLRRRERNYRAAHGGYDRLPPPPNASQVDTLPSKLRKLMTFTSPRPQESEK-VSED 60
           MGGKG +RRE+NY AAHGG  RLPPPP+ S+ D +PS LR LM +TSP P +S K V E 
Sbjct: 1   MGGKGKKRREKNYLAAHGGPARLPPPPDRSKQDDVPSTLRILMNYTSPSPHDSTKQVVEK 60

Query: 61  VQRKRKREAVDTEKKYHPKEAPGKSDLKSKGHGGNSQVPQLTGSDDDVQSKSSEKKKKKR 120
            ++ +K E V                           VP      DD      EKKKKKR
Sbjct: 61  KEKLKKAEVV---------------------------VPATESDGDD---SVVEKKKKKR 120

Query: 121 KKKQVTDLRFEDLSENSNRRLKKRERQKKYHEAKKNKHKKGKTDEDL--DFPRHEKIKFG 180
           K+ Q+TDLRFE+     + R K++ER+KKY EAKK K  KGKT++ L  +FP+HE+I+FG
Sbjct: 121 KRNQMTDLRFENELAEIDGRSKRKERKKKYWEAKKQKKNKGKTEDTLRENFPKHEQIRFG 180

Query: 181 DVVEAPLKLTAVPKAFKSAQVASQERKRLQAITEYRNRKGWTSRPGLQIPSM 230
           DVV+APLKL  VPKA KS   ASQER RLQAI  YR+RKGWT+RPG+ IP++
Sbjct: 181 DVVQAPLKLAVVPKARKSTLSASQERLRLQAIDAYRSRKGWTARPGVPIPAV 202

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g00180 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG12g00180 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023547832.11.30e-155100.00protein PXR1 [Cucurbita pepo subsp. pepo] >XP_023547833.1 protein PXR1 [Cucurbit... [more]
XP_022959194.12.07e-15298.30uncharacterized protein LOC111460256 [Cucurbita moschata] >XP_022959195.1 unchar... [more]
KAG6574789.12.94e-15297.87hypothetical protein SDJN03_25428, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023006093.11.39e-14896.61probable H/ACA ribonucleoprotein complex subunit 4 [Cucurbita maxima] >XP_023006... [more]
KAG7013369.15.16e-14891.30hypothetical protein SDJN02_23533 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cp4.1LG12g00180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H3V71.00e-15298.30uncharacterized protein LOC111460256 OS=Cucurbita moschata OX=3662 GN=LOC1114602... [more]
A0A6J1KUZ86.72e-14996.61probable H/ACA ribonucleoprotein complex subunit 4 OS=Cucurbita maxima OX=3661 G... [more]
A0A5A7TEP77.30e-12383.83Protein PXR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002900 ... [more]
A0A1S4E2Q26.96e-12182.98LOW QUALITY PROTEIN: protein PXR1 OS=Cucumis melo OX=3656 GN=LOC103499034 PE=4 S... [more]
A0A6J1DLN31.90e-11879.15DNA ligase 1 OS=Momordica charantia OX=3673 GN=LOC111021190 PE=4 SV=1[more]
BLAST of Cp4.1LG12g00180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G45520.14.9e-4651.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..156
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..140
NoneNo IPR availablePANTHERPTHR37218COILED-COIL PROTEINcoord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g00180.1Cp4.1LG12g00180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016874 ligase activity