Cp4.1LG11g11320 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g11320
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	CRS2-associated factor 1, chloroplastic
Location	Cp4.1LG11: 9352948 .. 9356925 (-)
RNA-Seq Expression	Cp4.1LG11g11320
Synteny	Cp4.1LG11g11320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTCAAGTTGTCTTTTCCCTTTCCCATTTTCTCTCCTCAATTTAGCCCTAATTCAACTCCGTCGCACCGTACTCTTACCGAAATCCGATTTTCCCGTTGGAACAATGCAAACGCTGAGAAATTCGAGCAGCGCCGACGGTCTCAGCAAGAAATCGAGGATGAAATCCGCCGCGAGCGCCGCTTCGATTCCGCTGCTAGAATTACCGACCTCTGCGATTCCAACTCGTCCACCTCCGCCATTGACCGGACTGAAACGTTTAGGTCTGTCGGCACTCCGTCGTATCCGTCGAGGCCTTCAATCCCTGGTCGAAAATCCAAGTACTCAAAAAACCCTAATCCTGGTTCACCANATTCCAACTCGTCCACCTCCGCCATTGACCGGACTGAAACGTTCAGGTCTGTCGGCACTCCGTCGTATCCGTCGAGGCCGTCAATCCCTGGTCGAAAATCCAAGTACTCAAAAAACCCTAATCCTGGTTCACCACCTCCATTTCGTCAAGTTTCGAAGACCAAAAAGACCATGAGCGCACCTAAAGAAATGCCTATTGGCGTAAAAGCCAAAGTTAGTCTAAGTGAAGATGGAGTTTCGTACGTAATCGATGGAGCTCCATTTGAGTTCAAGTATAGCTACACAGAAACGCCGAAGTTGAAGCCGATAAAGCTGCGTGAACCATATGCCCCGTTTGGGCCGACGACAATGCCGCGGCCGTGGACGGGGCGTGCTCCATTGCCGCCAAGCCAGAAGAATTTGCCGGAATTCGACTCGTTTCAGCTGCCGCCGAAAAATAAGAAAGGGGTTAAAACAGTGCAGGCACCGGGACCATTCTTAGCAGGTTCGGGGCCCAAATACGTGATGTCGAGGGAAGAAATATTGGGTGAGCCGTTAACAGAGGAGGAGATCAAGACGCTGATTCGTGGGTGCATCAAATCTAATAGGCAATTGAATATTGGTATTCTTTCTCTCAAACCCTGTTTAGCCAGATTTCTAAACACTGGATTTCTACATTGCGTTCTTGCCATTAGTTTTCCCAGTAATTTTTTAACAGAAATCTGTTAAATAGAATCTTTGGACTTGAAATTTATAGATTAGAACAGGCTTTGAATGGAAAATTCTATCTTCTCTGCATTTTGGGGTGTGGTAGGATGAACTTACTGAAATTTTTACTCTGAATTGCTTTTAGGTAGAGATGGTTTAACGCACAATATGTTGGATAACATACATGCTCATTGGAAACGGCGTAGAGTGTGCAAGATAAAATGCAAAGGAGTGTGTACGGTTGATATGGACAATGTGAAACAGCAATTGGAGGTTGATGCCTCTTTATACATAGCACTGACGGATTACTACTGATTGTCGTTTAAATACACTAGCAGTTTTTCTTATGCCTCCTTCCAATACAAATATAAATTAGGTTAAATAAATATTTTAGTAGTTATAGTGTGAGATCCCACATCGGTTGGAGAGGAGAATGAAGCACCCTTTGTGGAAACCTCTCCCTAGCAGACGTGTTTTAAAAACCTTGAGGGGAAACTCGAAAGGAAAAGCCCAAAGAGGACAACATCTGCTAGGGGTGAGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACACCGGGCGATGTGCGAGCGAGGAGGCTGAGCCTCGAAAGTAAGGACGTTGGGTCTCGAAGGGGGTGGATTATGAGCTCATTGAAGAGGAGAACGAAGCATTATTTATAAGAGTGTGGAAACCTCTTCCTAGCATACCATTTTATGAGCTCATTGAAGAGGAGAACGAAGCATTATTTATAAGAGTGTGGAAACCTCTTCCTAGCATACCATTTTATGAGCTCATTGAAGAGGAGAACGAAGCATTATTTATAAGAGTGTGGAAACCTCTTCCTAGCATACCATTTTATGAGCTCATTGAAGAGGAGAACGAAGCATTATTTATAAGAGTGTGGAAACCTCTTCCTAGCATACCATTTTATGAGCTCATTGAAGAGGAGAACGAAGCATTATTTATAAGAGTGTGGAAACCTCTTCCTAGCATACCATTTTATGAGCTCATTGAAGAGGAGAACGAAGCATTATTTATAAGAGTGTGGAAACCTCTTCTTAGCATACCATTTTAAAAACCTTGAGGGGAAACTCAAAAGGAAAAGCCCAAAGATGACAATATCTGCTAGTAGTGGGCTTGGGCCGTTACATATATAGCTTGTGTTTGGTTTCAATTTTATCCTTACGAGTCTTTATCGTGCTTGTGAGTCTTTTCGGCTTCTTGAATTACGACAATGATGTCTTTGGTTTTTCTTGTGGTCGGTTGCTTGCAGTCTCTGTTCTTTTTAAGTTAAGAGTTCGAGTCTAGACCTCCTATCTTGCCTTTGTTAAATAAATGTATTGTACTTTTTTTGTTTACTTGATAAACATACCATCAGCTTTGAGCAATGTAGTGTTGCTTTATGCTTCTAACTTGTTTTCTTGTTACATAATTTTGGTAGGAAAAAACTGGGGGCAAAATTATCTATAGTAGGGGTGGGGCATTGTACCTTTATCGAGGTAGAAATTACAACTATAAAACCCGTCCTCGTTTCCCTCTTATGCTATGGAAACCCGCTGCACCAGTGTACCCTCGGCTCCTTAAGCAGGTCCCTGATGGCCTAACACTGGATGAAGTGACTGAAATGCGTAAGAAGGGGCGGAAATTAATACCAATATGCAAGCTCGGTATGGGTCTTTTCTTACTCTTCCATCACCATGTGCGAAAGATTTTAGCATGCTAAACATTCTGTTGTTTGTACATGTTGTAGGGAAAAATGGTGTGTACTCTAACCTCGTAAAACATGTTAGAGAGGCGTTCGAAGAGTGTGAACTTGTCAAGATTAATTGTCAAGGGCTGAACGAGAGCGACTTCAAGAAAATCGGCGCGAAACTAAGGGTCTTCTTCTGTTTTCTCTCTTTGATGAAAAAGTGATCAACTCTATTTCATTGGGTTTTGCCAAGCAATCTATTAACCAACTTTTTGATCTATTTGACTACAGGATCTTGTCCCTTGTGTTCTTATTTCTTTTGAAAGCGAGCACATTCTTTTGTGGAGAGGAAAAGATTGGAAATCCTCCCTTCCATATATAGTAAGAAATCCCGTGGGAGCGAAGGCACGTGAAACAAACGAGGGAACTATTGCTGCACCATCCATTGAAGAACGAGAAGCATCGGTCGAGAATACTAGTCTGATCGACCATGATTTGATGTCTTTGGGTTCTGCAGGCCTCTCAACTGGAGGAAACGAGGAGCTAGATCCTTTGGTTGCCGAGAAATCTGTCTCTGCCGATGTCGAATCATTAACAGCAATGATGCATAAAAGCAATTCTCTAGCAGACGCCGACGATATGGAAGCTACAGGGTCAGATGTTCAAGAAATGAACACTGATAACACATGTGATGATTCTGAATCGTCGAGCGCAATGTCGGGTGGTGAGACTGAGACTGATTCAGGACATGAATACTCGGACTTTGATGAAGCAGAACCAATGGAACAATCAAGATTGAATGCCATTGCAGCTGCTGGAAACCTGGAGACTAAGGTAGGGGGTACTTCAGAAGCCACACAAGCTCTCAATAAGCCAGCAAGTTACACCATGGATGGAGTTCTTCAATTATTGAAGCAAGCGATCGAAAATGGCGGTGCCCTTGTCTTGGACGATTCTTCATTGGATGCCGATGTCGTTTATCGTCGAGCAGTTGCCTTTTCTCAGTCTGCTCCTCCGGCGCCCGTTTTCAGGCACCAACCAAGGAAGAAGGTAGCAGTTGATAAGGGTGAGGAGCAAACAAGCAGAGAATTGGAGGAAGTGAAAGAAGAGAGTGCAGTTTCGGTGGAGAGAGGGAGTGGGAAGAAGGATTCTAAGACGAAAAAGAAGAAGAATTTTGGTGAATATAATTTCAGTTCGCCACAAGGAAGCTTAGGAGTGGATGAACTTGCAAAGTTATTGGCATGA

mRNA sequence

ATGGCGTTCAAGTTGTCTTTTCCCTTTCCCATTTTCTCTCCTCAATTTAGCCCTAATTCAACTCCGTCGCACCGTACTCTTACCGAAATCCGATTTTCCCGTTGGAACAATGCAAACGCTGAGAAATTCGAGCAGCGCCGACGGTCTCAGCAAGAAATCGAGGATGAAATCCGCCGCGAGCGCCGCTTCGATTCCGCTGCTAGAATTACCGACCTCTGCGATTCCAACTCGTCCACCTCCGCCATTGACCGGACTGAAACGTTTAGGTCTGTCGGCACTCCGTCGTATCCGTCGAGGCCTTCAATCCCTGGTCGAAAATCCAAGTACTCAAAAAACCCTAATCCTGGTTCACCANATTCCAACTCGTCCACCTCCGCCATTGACCGGACTGAAACGTTCAGGTCTGTCGGCACTCCGTCGTATCCGTCGAGGCCGTCAATCCCTGGTCGAAAATCCAAGTACTCAAAAAACCCTAATCCTGGTTCACCACCTCCATTTCGTCAAGTTTCGAAGACCAAAAAGACCATGAGCGCACCTAAAGAAATGCCTATTGGCGTAAAAGCCAAAGTTAGTCTAAGTGAAGATGGAGTTTCGTACGTAATCGATGGAGCTCCATTTGAGTTCAAGTATAGCTACACAGAAACGCCGAAGTTGAAGCCGATAAAGCTGCGTGAACCATATGCCCCGTTTGGGCCGACGACAATGCCGCGGCCGTGGACGGGGCGTGCTCCATTGCCGCCAAGCCAGAAGAATTTGCCGGAATTCGACTCGTTTCAGCTGCCGCCGAAAAATAAGAAAGGGGTTAAAACAGTGCAGGCACCGGGACCATTCTTAGCAGGTTCGGGGCCCAAATACGTGATGTCGAGGGAAGAAATATTGGGTGAGCCGTTAACAGAGGAGGAGATCAAGACGCTGATTCGTGGGTGCATCAAATCTAATAGGCAATTGAATATTGGTAGAGATGGTTTAACGCACAATATGTTGGATAACATACATGCTCATTGGAAACGGCGTAGAGTGTGCAAGATAAAATGCAAAGGAGTGTGTACGGTTGATATGGACAATGTGAAACAGCAATTGGAGGAAAAAACTGGGGGCAAAATTATCTATAGTAGGGGTGGGGCATTGTACCTTTATCGAGGTAGAAATTACAACTATAAAACCCGTCCTCGTTTCCCTCTTATGCTATGGAAACCCGCTGCACCAGTGTACCCTCGGCTCCTTAAGCAGGTCCCTGATGGCCTAACACTGGATGAAGTGACTGAAATGCGTAAGAAGGGGCGGAAATTAATACCAATATGCAAGCTCGGGAAAAATGGTGTGTACTCTAACCTCGTAAAACATGTTAGAGAGGCGTTCGAAGAGTGTGAACTTGTCAAGATTAATTGTCAAGGGCTGAACGAGAGCGACTTCAAGAAAATCGGCGCGAAACTAAGGGATCTTGTCCCTTGTGTTCTTATTTCTTTTGAAAGCGAGCACATTCTTTTGTGGAGAGGAAAAGATTGGAAATCCTCCCTTCCATATATAGTAAGAAATCCCGTGGGAGCGAAGGCACGTGAAACAAACGAGGGAACTATTGCTGCACCATCCATTGAAGAACGAGAAGCATCGGTCGAGAATACTAGTCTGATCGACCATGATTTGATGTCTTTGGGTTCTGCAGGCCTCTCAACTGGAGGAAACGAGGAGCTAGATCCTTTGGTTGCCGAGAAATCTGTCTCTGCCGATGTCGAATCATTAACAGCAATGATGCATAAAAGCAATTCTCTAGCAGACGCCGACGATATGGAAGCTACAGGGTCAGATGTTCAAGAAATGAACACTGATAACACATGTGATGATTCTGAATCGTCGAGCGCAATGTCGGGTGGTGAGACTGAGACTGATTCAGGACATGAATACTCGGACTTTGATGAAGCAGAACCAATGGAACAATCAAGATTGAATGCCATTGCAGCTGCTGGAAACCTGGAGACTAAGGTAGGGGGTACTTCAGAAGCCACACAAGCTCTCAATAAGCCAGCAAGTTACACCATGGATGGAGTTCTTCAATTATTGAAGCAAGCGATCGAAAATGGCGGTGCCCTTGTCTTGGACGATTCTTCATTGGATGCCGATGTCGTTTATCGTCGAGCAGTTGCCTTTTCTCAGTCTGCTCCTCCGGCGCCCGTTTTCAGGCACCAACCAAGGAAGAAGGTAGCAGTTGATAAGGGTGAGGAGCAAACAAGCAGAGAATTGGAGGAAGTGAAAGAAGAGAGTGCAGTTTCGGTGGAGAGAGGGAGTGGGAAGAAGGATTCTAAGACGAAAAAGAAGAAGAATTTTGGTGAATATAATTTCAGTTCGCCACAAGGAAGCTTAGGAGTGGATGAACTTGCAAAGTTATTGGCATGA

Coding sequence (CDS)

ATGGCGTTCAAGTTGTCTTTTCCCTTTCCCATTTTCTCTCCTCAATTTAGCCCTAATTCAACTCCGTCGCACCGTACTCTTACCGAAATCCGATTTTCCCGTTGGAACAATGCAAACGCTGAGAAATTCGAGCAGCGCCGACGGTCTCAGCAAGAAATCGAGGATGAAATCCGCCGCGAGCGCCGCTTCGATTCCGCTGCTAGAATTACCGACCTCTGCGATTCCAACTCGTCCACCTCCGCCATTGACCGGACTGAAACGTTTAGGTCTGTCGGCACTCCGTCGTATCCGTCGAGGCCTTCAATCCCTGGTCGAAAATCCAAGTACTCAAAAAACCCTAATCCTGGTTCACCANATTCCAACTCGTCCACCTCCGCCATTGACCGGACTGAAACGTTCAGGTCTGTCGGCACTCCGTCGTATCCGTCGAGGCCGTCAATCCCTGGTCGAAAATCCAAGTACTCAAAAAACCCTAATCCTGGTTCACCACCTCCATTTCGTCAAGTTTCGAAGACCAAAAAGACCATGAGCGCACCTAAAGAAATGCCTATTGGCGTAAAAGCCAAAGTTAGTCTAAGTGAAGATGGAGTTTCGTACGTAATCGATGGAGCTCCATTTGAGTTCAAGTATAGCTACACAGAAACGCCGAAGTTGAAGCCGATAAAGCTGCGTGAACCATATGCCCCGTTTGGGCCGACGACAATGCCGCGGCCGTGGACGGGGCGTGCTCCATTGCCGCCAAGCCAGAAGAATTTGCCGGAATTCGACTCGTTTCAGCTGCCGCCGAAAAATAAGAAAGGGGTTAAAACAGTGCAGGCACCGGGACCATTCTTAGCAGGTTCGGGGCCCAAATACGTGATGTCGAGGGAAGAAATATTGGGTGAGCCGTTAACAGAGGAGGAGATCAAGACGCTGATTCGTGGGTGCATCAAATCTAATAGGCAATTGAATATTGGTAGAGATGGTTTAACGCACAATATGTTGGATAACATACATGCTCATTGGAAACGGCGTAGAGTGTGCAAGATAAAATGCAAAGGAGTGTGTACGGTTGATATGGACAATGTGAAACAGCAATTGGAGGAAAAAACTGGGGGCAAAATTATCTATAGTAGGGGTGGGGCATTGTACCTTTATCGAGGTAGAAATTACAACTATAAAACCCGTCCTCGTTTCCCTCTTATGCTATGGAAACCCGCTGCACCAGTGTACCCTCGGCTCCTTAAGCAGGTCCCTGATGGCCTAACACTGGATGAAGTGACTGAAATGCGTAAGAAGGGGCGGAAATTAATACCAATATGCAAGCTCGGGAAAAATGGTGTGTACTCTAACCTCGTAAAACATGTTAGAGAGGCGTTCGAAGAGTGTGAACTTGTCAAGATTAATTGTCAAGGGCTGAACGAGAGCGACTTCAAGAAAATCGGCGCGAAACTAAGGGATCTTGTCCCTTGTGTTCTTATTTCTTTTGAAAGCGAGCACATTCTTTTGTGGAGAGGAAAAGATTGGAAATCCTCCCTTCCATATATAGTAAGAAATCCCGTGGGAGCGAAGGCACGTGAAACAAACGAGGGAACTATTGCTGCACCATCCATTGAAGAACGAGAAGCATCGGTCGAGAATACTAGTCTGATCGACCATGATTTGATGTCTTTGGGTTCTGCAGGCCTCTCAACTGGAGGAAACGAGGAGCTAGATCCTTTGGTTGCCGAGAAATCTGTCTCTGCCGATGTCGAATCATTAACAGCAATGATGCATAAAAGCAATTCTCTAGCAGACGCCGACGATATGGAAGCTACAGGGTCAGATGTTCAAGAAATGAACACTGATAACACATGTGATGATTCTGAATCGTCGAGCGCAATGTCGGGTGGTGAGACTGAGACTGATTCAGGACATGAATACTCGGACTTTGATGAAGCAGAACCAATGGAACAATCAAGATTGAATGCCATTGCAGCTGCTGGAAACCTGGAGACTAAGGTAGGGGGTACTTCAGAAGCCACACAAGCTCTCAATAAGCCAGCAAGTTACACCATGGATGGAGTTCTTCAATTATTGAAGCAAGCGATCGAAAATGGCGGTGCCCTTGTCTTGGACGATTCTTCATTGGATGCCGATGTCGTTTATCGTCGAGCAGTTGCCTTTTCTCAGTCTGCTCCTCCGGCGCCCGTTTTCAGGCACCAACCAAGGAAGAAGGTAGCAGTTGATAAGGGTGAGGAGCAAACAAGCAGAGAATTGGAGGAAGTGAAAGAAGAGAGTGCAGTTTCGGTGGAGAGAGGGAGTGGGAAGAAGGATTCTAAGACGAAAAAGAAGAAGAATTTTGGTGAATATAATTTCAGTTCGCCACAAGGAAGCTTAGGAGTGGATGAACTTGCAAAGTTATTGGCATGA

Protein sequence

MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRERRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPKEMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEEEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEVTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRDLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVENTSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATGSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETKVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAPPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFSSPQGSLGVDELAKLLA

Homology

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy Swiss-Prot
Match: Q9SL79 (CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g20020 PE=2 SV=2)

HSP 1 Score: 656.8 bits (1693), Expect = 3.2e-187
Identity = 404/819 (49.33%), Postives = 499/819 (60.93%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           M+ KL+ PFPIF+P   PN  P  R  +EIRFSRW NANAE+FEQRRRSQ+E+E EIRR+
Sbjct: 1   MSLKLNTPFPIFAPSLFPNHNP--RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRD 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFD+A +I    DS ++ +A  +T  FRS GTPS PS  SIPGR+SKYSK P+ G    
Sbjct: 61  RRFDAATKIVHTHDSEAA-AAEPKTSPFRSRGTPSLPSARSIPGRRSKYSK-PDSG---- 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
                                P+RP         +K   P SPP                
Sbjct: 121 ---------------------PNRPK--------NKPRVPDSPP---------------- 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREP-YAPFGPTTMPRPW 240
              +  K +V LSEDG++YVI+GAPFEFKYSYTETPK+KP+KLREP YAPFGPTTM RPW
Sbjct: 181 --QLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPW 240

Query: 241 TGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTE 300
           TGRAPLP SQK   EFDSF+LPP  KKG+K VQ PGPF  G GP+YV S+EEILGEPLT+
Sbjct: 241 TGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTK 300

Query: 301 EEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ 360
           EE++ L+  C+K+ RQLN+GRDGLTHNML+NIH  WKRRRVCKIKCKGVCTVDMDNV +Q
Sbjct: 301 EEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQ 360

Query: 361 LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDE 420
           LEEK GGK+IY RGG L+L+RGRNYN++TRPRFPLMLWKP APVYPRL++QVP+GLT  E
Sbjct: 361 LEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQE 420

Query: 421 VTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLR 480
            T MR+KGR+L+PICKLGKNGVY +LVK+V+EAFE CELV+I+CQG+  SDF+KIGAKL+
Sbjct: 421 ATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLK 480

Query: 481 DLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVE 540
           DLVPCVL+SFE+E IL+WRG++WKSSL    +        E  E   A P  +E   S  
Sbjct: 481 DLVPCVLVSFENEQILIWRGREWKSSLTTPDKK---GDILEDIEVDTALPEDDEPSVSPN 540

Query: 541 NTSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEAT 600
            +  +                N  LD +  E     D   L      S S  D+ +ME T
Sbjct: 541 QSQTMTQ--------------NPPLDSM--ELQNDPDGHDL------SPSTVDSSEMEGT 600

Query: 601 GSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLET 660
            + +Q  +T +  + +  S      E E          DE E  E+              
Sbjct: 601 INSLQSWSTKDVTEPTVDSFLRDLEEPE----------DEPETSEEI------------- 660

Query: 661 KVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSA 720
                          +  +++ VL L+KQA+E+G ALVLD + LDAD V+ +AVAFS  A
Sbjct: 661 ---------------SKQSIERVLILMKQAVESGTALVLDAADLDADTVFSKAVAFSSVA 701

Query: 721 PPAPVFRHQPRKKVAVDKGEEQ----------------------TSRELEEVKEESAVSV 780
            P PVF+H  RK+  V K E Q                      +S  +   K E A   
Sbjct: 721 SPGPVFQHGLRKQPTVKKQESQEFGYGDLEAKSSNVVVSRNASKSSNVVVFGKREVAERG 701

Query: 781 ERGSGKKDSKTKKKKNFGEYNFSSPQGSLGVDELAKLLA 797
           ER   ++ SK K  +   +Y    P G+L VDELAKLLA
Sbjct: 781 EREEKEEGSKKKMDEFAEDYREVMPHGTLKVDELAKLLA 701

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy Swiss-Prot
Match: Q5VMQ5 (CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0495900 PE=2 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 3.6e-154
Identity = 336/696 (48.28%), Postives = 440/696 (63.22%), Query Frame = 0


Query: 148 PGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPKEMPIGVK----AKVSLSEDGVSYVIDG 207
           P   +K  + P P S P F  V + +     PK++PI       A V ++E G++Y +DG
Sbjct: 36  PAAVAKRRRAPAP-SHPAFSSVIRGR-----PKKVPIPENGEPAAGVRVTERGLAYHLDG 95

Query: 208 APFEFKYSYTETPKLKPIKLRE-PYAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPP 267
           APFEF+YSYTETP+ +P+ LRE P+ PFGP   PRPWTGR PLP S+K LPEFDSF LPP
Sbjct: 96  APFEFQYSYTETPRARPVALREAPFLPFGPEVTPRPWTGRKPLPKSRKELPEFDSFMLPP 155

Query: 268 KNKKGVKTVQAPGPFLAGSGPKY-VMSREEILGEPLTEEEIKTLIRGCIKSNRQLNIGRD 327
             KKGVK VQ+PGPFLAG+ P+Y   SREE+LGEPLT+EE+  L++  +K+ RQLNIGRD
Sbjct: 156 PGKKGVKPVQSPGPFLAGTEPRYQAASREEVLGEPLTKEEVDELVKATLKTKRQLNIGRD 215

Query: 328 GLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRG 387
           GLTHNML+NIH+HWKR+RVCKIKCKGVCTVDMDNV QQLEEK GGK+I+ +GG ++L+RG
Sbjct: 216 GLTHNMLENIHSHWKRKRVCKIKCKGVCTVDMDNVCQQLEEKVGGKVIHHQGGVIFLFRG 275

Query: 388 RNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEVTEMRKKGRKLIPICKLGKNGV 447
           RNYNY+TRP +PLMLWKPAAPVYPRL+K++PDGLT DE  +MRK+GR+L PICKLGKNGV
Sbjct: 276 RNYNYRTRPIYPLMLWKPAAPVYPRLVKKIPDGLTPDEAEDMRKRGRQLPPICKLGKNGV 335

Query: 448 YSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRDLVPCVLISFESEHILLWRGKD 507
           Y NLVK VREAFE C+LV+++C GLN+SD +KIGAKL+DLVPC L+SFE EHIL+WRG D
Sbjct: 336 YLNLVKQVREAFEACDLVRVDCSGLNKSDCRKIGAKLKDLVPCTLLSFEFEHILMWRGND 395

Query: 508 WKSSLPYIVRNPVGA------KARETNEGTIAAP-SIEEREASVENTSLID--------- 567
           WKSSLP +  N           ++E   G+   P  +     S++  +LI+         
Sbjct: 396 WKSSLPPLEENDFKVASDQILNSKEAGSGSALTPIELVNNATSLKKCNLIEGAEKLEDSM 455

Query: 568 ----HDLMSLGSAGLSTG--GNEELDPLVAEKSVSADVE------------SLTAMMHKS 627
                + M LGSA  + G   +E +D    E S  A +E            S T+ ++  
Sbjct: 456 KSSFENGMILGSACGNPGVCNSEGIDG--TESSADAPIEFSPSNSARDLDPSQTSTLYCQ 515

Query: 628 NSLADADDMEATGSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSR 687
           +SL D    ++   ++ EM  D  C +SE S  +    T           DE   +E  R
Sbjct: 516 SSLLD----KSENGELIEMYPDR-CGNSEQSPDVPEALTCL-----MGSSDEIHELETMR 575

Query: 688 LNAIAAAGNLETKVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSL-DAD 747
            N     G         S+   + +   SY M+G+L L KQAI++G ALVL+++   DA+
Sbjct: 576 RNCKHLNG---------SDGVNSDSIVPSY-MEGILLLFKQAIDSGMALVLNENEFADAN 635

Query: 748 VVYRRAVAFSQSAPPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKD- 797
            VY+++VAF+++AP   V RH PRK     K E   +  + +  EE  VS      KK+ 
Sbjct: 636 YVYQKSVAFTKTAPRYLVLRHTPRKSHGTQKTEPAKNVRINKHLEEHKVSDH--VKKKEI 695

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy Swiss-Prot
Match: Q84N49 (CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 9.8e-144
Identity = 320/708 (45.20%), Postives = 426/708 (60.17%), Query Frame = 0


Query: 130 TETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSA-----PKEMPI 189
           + +F S    SYP  P+       + + P P  P   R+ + +    SA      K++PI
Sbjct: 8   SRSFLSPAQQSYPRLPASVRLCLSHHEQP-PTGPKRHRRAATSHPAFSAAARGRAKKIPI 67

Query: 190 G----VKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLRE-PYAPFGPTTMPRPW 249
                  A V +++ G+SY +DGAPFEF+YSYTE P+ +P+ LRE P+ PFGP   PRPW
Sbjct: 68  ADTDEPAAGVRVTDRGISYRLDGAPFEFQYSYTEAPRARPVALREAPFMPFGPEATPRPW 127

Query: 250 TGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKY-VMSREEILGEPLT 309
           TGR PLP S+K LPEFDSF LP   KKGVK VQ+PGPFLAG  P+Y  +SRE+ILGEPLT
Sbjct: 128 TGRKPLPKSRKELPEFDSFVLPAPGKKGVKPVQSPGPFLAGMEPRYQSVSREDILGEPLT 187

Query: 310 EEEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQ 369
           +EE+  L++G +KS RQLN+GRDGLTHNML+NIH+HWKR+RVCKIKCKGVCT+DMDN+  
Sbjct: 188 KEEVSELVKGSLKSKRQLNMGRDGLTHNMLENIHSHWKRKRVCKIKCKGVCTIDMDNICH 247

Query: 370 QLEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLD 429
           QLEEK GGK+I+ +GG ++L+RGRNYNY+TRP FPLMLWKP APVYPRL+ +VP GLT D
Sbjct: 248 QLEEKVGGKVIHRQGGVIFLFRGRNYNYRTRPCFPLMLWKPVAPVYPRLVTKVPGGLTPD 307

Query: 430 EVTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKL 489
           E TEMR +G +L PICKLGKNGVY+NLV  VREAFE C+LV+++C GLN+SD +KIGAKL
Sbjct: 308 EATEMRTRGHQLPPICKLGKNGVYANLVNQVREAFEACDLVRVDCSGLNKSDCRKIGAKL 367

Query: 490 RDLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASV 549
           +DLVPC+L+SFE EHIL+WRG DWKSSLP +             E +     ++E  +  
Sbjct: 368 KDLVPCILLSFEFEHILMWRGSDWKSSLPPL-------------ENSYEVTKVQESFSGK 427

Query: 550 ENTSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLT-AMMHKSNSLADADD-- 609
           E+   + H             GN           V A +E ++ A  HK+ +L +  +  
Sbjct: 428 ESNEKVTH------------SGN-----------VLAQIELVSAATSHKNWNLDEGQEKF 487

Query: 610 MEATGSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAG 669
            ++T SD+  +N+         S+ +S  E   D   EYS  +    +    LN  +   
Sbjct: 488 KDSTDSDM-VLNSAKDVPALFHSTGISRTEPSADIPLEYSPLNPVCDIMDPSLNCRSIPT 547

Query: 670 N---------------------LETKVGGTSEATQALNKPASYTMDGVLQLLKQAIENGG 729
           N                     ++ K    ++ T  LN  +   ++G+L LL+QAI +G 
Sbjct: 548 NNCESRALVEKSEHCPDDYNLEMKRKRNDGTKGTVVLNSGSK--VEGLLCLLEQAIHSGR 607

Query: 730 ALVLDDSSL-DADVVYRRAVAFSQSAPPAPVFRHQPRKKVA---VDKGEEQTSRELEEVK 789
           ALVL +  L D+D+VY ++VAF++S P   VF +  RK  A   V     +T   L E K
Sbjct: 608 ALVLSEDELADSDLVYEKSVAFTKSIPRRLVFENTRRKSSARRNVPDNHARTKTHLVENK 667

Query: 790 EESAVSVERGSGKKDSKTKKKKNFGEYNFSS--PQGSLGVDELAKLLA 797
             S+  VE           +  + G+   S    QG+L VDELAKLLA
Sbjct: 668 MLSS-PVENKFIVNGGSAMQTIDHGQEFLSDVVHQGTLRVDELAKLLA 674

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy Swiss-Prot
Match: Q9LDA9 (CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g23400 PE=2 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-117
Identity = 249/533 (46.72%), Postives = 329/533 (61.73%), Query Frame = 0


Query: 115 PGSPXSNSSTSAIDRTETFR---SVGTPSYPSRPSIPGRKSKYSKNPNPGSP---PPFRQ 174
           P +P    S+S      TFR    +  P Y        +K+ +  + NP  P   P  + 
Sbjct: 17  PSTPPMADSSSG-----TFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNPKKPQSNPALKL 76

Query: 175 VSKTKKTMSAPKEMPIGVKA--KVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREP 234
                +     KE  I       + + + GVSY + GAPFEF++SY+ETPK+KP+ +REP
Sbjct: 77  PHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSETPKVKPVGIREP 136

Query: 235 -YAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKY 294
            + PF P TMPRPWTG+APL  S+K +P FDSF  PP  K GVK V+ PGP   G  PK 
Sbjct: 137 AFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKE 196

Query: 295 VMSREEILGEPLTEEEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKC 354
            M+REE+LGEPL   E   LI+  +  NRQ+N+GRDG THNML+ IH+HWKRRRVCK++C
Sbjct: 197 GMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRC 256

Query: 355 KGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYP 414
           KGV TVDM+NV + LEEKTGG+II+  GG +YL+RGRNYNY+TRP++PLMLWKPAAPVYP
Sbjct: 257 KGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYP 316

Query: 415 RLLKQVPDGLTLDEVTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQG 474
           +L+++VP+GLT +E  E R KG+ L PICKL KNGVY +LVK VR+AFE   LVK++C G
Sbjct: 317 KLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPG 376

Query: 475 LNESDFKKIGAKLRDLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGT 534
           L  SD+KKIGAKL++LVPCVL+SF+ E IL+WRG++WKS     V NP+     ETN   
Sbjct: 377 LEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSR---FVDNPLIPSLSETNTTN 436

Query: 535 IAAPS---IEEREASVENTSLIDHDLMSLGSAGLSTG----------GNEELDPLVAE-K 594
              PS    EE+  +  +T++    ++SL    L +           G ++L   V E +
Sbjct: 437 ELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDLLKKVEELE 496

Query: 595 SVSADVESLTAMMHKSNSLADADD-------MEATGSDVQEMNTDNTCDDSES 618
             S   E     M  SN+   A+D        E   SD+ + + D+ C D ES
Sbjct: 497 GTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDD-DFDDECSDDES 540

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy Swiss-Prot
Match: Q657G7 (CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0323300 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.2e-103
Identity = 208/446 (46.64%), Postives = 281/446 (63.00%), Query Frame = 0


Query: 93  TPSYPSRPSIPGRKSKYSKNPNPGSPXSNSSTSAIDRTETFRSVGTPSYPSRPSIP-GRK 152
           +P  P RPS P R  + +   +P  P  N            R    P  PS   +P  R+
Sbjct: 2   SPPPPQRPS-PSRAGRANLFSSPPPPLPNC------YDPKHRRPAPPPLPSARRLPSNRR 61

Query: 153 SKYSKNPNP----GSPPPFR------QVSKTKKTMSAPKEMPIGVKAKVSLSED------ 212
            ++ + PNP    G  P FR         K    ++A  E    + A  S + D      
Sbjct: 62  RRHDQPPNPTTGNGGNPAFRAPHLRTAYRKPVPPVAAAGEGEALLAADASDAADGRAVVV 121

Query: 213 ---GVSYVIDGAPFEFKYSYTETPKLKPIKLREP-YAPFGPTTMPRPWTGRAPLPPSQKN 272
              G+S+ + GAPF+F++SY+E P+  P+ +REP + PF P TMPRPWTG+APL   ++ 
Sbjct: 122 GPSGLSFRLPGAPFDFRFSYSECPRAPPVAIREPAFLPFAPPTMPRPWTGKAPLLTKEEK 181

Query: 273 LPEFDSFQLPPKNKKGVKTVQAPGPF----------LAGSGPKYVMSREEILGEPLTEEE 332
                     P  ++  +TV A G            LA   P    SREE+LGEPLT  E
Sbjct: 182 ARRRGVRLHTPLGEEAPRTVSAHGIMMEVRGRRKLDLARVSPGDGRSREEVLGEPLTAAE 241

Query: 333 IKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLE 392
           ++ L++  I  NRQLNIGRDGLTHNML+ IH HW+R+ +CK++C+GV TVDM N+   LE
Sbjct: 242 VRDLVKPHISHNRQLNIGRDGLTHNMLEMIHCHWRRQEICKVRCRGVPTVDMKNLCYHLE 301

Query: 393 EKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEVT 452
           EK+GGK+I+  GG ++LYRGRNYN +TRPR+PLMLWKPA PVYP+L+++ P+GLT +E  
Sbjct: 302 EKSGGKVIHRVGGVVFLYRGRNYNPRTRPRYPLMLWKPATPVYPKLIQEAPEGLTKEEAD 361

Query: 453 EMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRDL 508
           EMR++G+ L+PICKL KNG+Y  LV+ VR+AFE  +LVKI+C+GLN SD+KKIGAKLRDL
Sbjct: 362 EMRRRGKDLLPICKLAKNGIYIYLVRDVRDAFEGSDLVKIDCEGLNPSDYKKIGAKLRDL 421

[Close]

BLAST of Cp4.1LG11g11320 vs. NCBI nr
Match: XP_023547205.1 (CRS2-associated factor 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023547206.1 CRS2-associated factor 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1444 bits (3739), Expect = 0.0
Identity = 751/796 (94.35%), Postives = 751/796 (94.35%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT
Sbjct: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG
Sbjct: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK 660
           SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK
Sbjct: 601 SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK 660

Query: 661 VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP 720
           VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP
Sbjct: 661 VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP 720

Query: 721 PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 780
           PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS
Sbjct: 721 PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 751

Query: 781 SPQGSLGVDELAKLLA 796
           SPQGSLGVDELAKLLA
Sbjct: 781 SPQGSLGVDELAKLLA 751

[Close]

BLAST of Cp4.1LG11g11320 vs. NCBI nr
Match: KAG6599466.1 (CRS2-associated factor 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1400 bits (3624), Expect = 0.0
Identity = 733/798 (91.85%), Postives = 742/798 (92.98%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+AKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT
Sbjct: 181 EMPIGVEAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRK+GRKLIPICKLGKNGVYSNL+KHVREAFEECELVKINCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKRGRKLIPICKLGKNGVYSNLIKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPYI RNPVGAKAR TNEG IAAPSIEEREASVE+
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIERNPVGAKARGTNEGLIAAPSIEEREASVED 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLIDHDLMSLGSAGLS GGNEELDPLVAEKSVSADV+SLTAMM +SNSLADADDMEATG
Sbjct: 541 TSLIDHDLMSLGSAGLSAGGNEELDPLVAEKSVSADVDSLTAMMGESNSLADADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETET--DSGHEYSDFDEAEPMEQSRLNAIAAAGNLE 660
           SDVQEMNTD+TCDD+ESSSAMSGGETET  DSGHE SDFDEAEPMEQSRLNAIAAAGNLE
Sbjct: 601 SDVQEMNTDSTCDDTESSSAMSGGETETETDSGHENSDFDEAEPMEQSRLNAIAAAGNLE 660

Query: 661 TKVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS 720
           TKVGG+SEATQALNKPASY MDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS
Sbjct: 661 TKVGGSSEATQALNKPASYAMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS 720

Query: 721 APPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN 780
           APPAPVFRHQPRKKVAVDKGEEQTSRELE VKEESAVSVERGSGKKDSKTKKKKNFGEYN
Sbjct: 721 APPAPVFRHQPRKKVAVDKGEEQTSRELE-VKEESAVSVERGSGKKDSKTKKKKNFGEYN 752

Query: 781 FSSPQGSLGVDELAKLLA 796
           FSSPQGSLGVDELAKLLA
Sbjct: 781 FSSPQGSLGVDELAKLLA 752

[Close]

BLAST of Cp4.1LG11g11320 vs. NCBI nr
Match: XP_022999431.1 (CRS2-associated factor 1, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 1387 bits (3589), Expect = 0.0
Identity = 722/796 (90.70%), Postives = 734/796 (92.21%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LT+IRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTDIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+A VSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPW 
Sbjct: 181 EMPIGVEANVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWM 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRG IKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGSIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELV++NCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVRVNCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPY+ RNPVGAKAR TNEGTI+APSIEEREASVEN
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYVERNPVGAKARGTNEGTISAPSIEEREASVEN 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLID DLMSLGSAGLSTGGNEELDPLVAEKSVSAD +SLTAMM KSNSLA+ADDMEATG
Sbjct: 541 TSLIDQDLMSLGSAGLSTGGNEELDPLVAEKSVSADFDSLTAMMRKSNSLANADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK 660
           SDVQEMNTD+TCDDSES S MSGGETETDSGHE SDFDEAEPMEQSR NAIAAAGNLETK
Sbjct: 601 SDVQEMNTDSTCDDSESWSTMSGGETETDSGHENSDFDEAEPMEQSRFNAIAAAGNLETK 660

Query: 661 VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP 720
           VGGTSEATQALNKPASY MDGVLQLLKQA+ENGGALVLDDSSLDADV+YRRAVAFSQSAP
Sbjct: 661 VGGTSEATQALNKPASYAMDGVLQLLKQAVENGGALVLDDSSLDADVIYRRAVAFSQSAP 720

Query: 721 PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 780
           P PVFRHQP+KKVAVDKG EQTSRELE VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS
Sbjct: 721 PEPVFRHQPKKKVAVDKGPEQTSRELE-VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 750

Query: 781 SPQGSLGVDELAKLLA 796
           SPQGSLGVDELAKLLA
Sbjct: 781 SPQGSLGVDELAKLLA 750

[Close]

BLAST of Cp4.1LG11g11320 vs. NCBI nr
Match: XP_022946780.1 (CRS2-associated factor 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1373 bits (3554), Expect = 0.0
Identity = 722/798 (90.48%), Postives = 730/798 (91.48%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+AKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT
Sbjct: 181 EMPIGVEAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRK+GRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKRGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPYI RNPVGAKAR TNEGTIAAPSIEEREASVE+
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIERNPVGAKARGTNEGTIAAPSIEEREASVED 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLIDHDLMSLGSAGLS  GNEELDPLVAEKSVSADV+SLTAMM +SNSLADADDMEATG
Sbjct: 541 TSLIDHDLMSLGSAGLSARGNEELDPLVAEKSVSADVDSLTAMMGESNSLADADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETET--DSGHEYSDFDEAEPMEQSRLNAIAAAGNLE 660
           SDVQEMNTD+TCDD+ESSSAMSGGETET  DSGHE SDFDEAEPMEQSRLNAIAAAGNLE
Sbjct: 601 SDVQEMNTDSTCDDTESSSAMSGGETETETDSGHENSDFDEAEPMEQSRLNAIAAAGNLE 660

Query: 661 TKVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS 720
           TK             PASY MDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS
Sbjct: 661 TK-------------PASYAMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS 720

Query: 721 APPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN 780
           APPAPVFRHQPRKKVAVDKGEEQT+RELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN
Sbjct: 721 APPAPVFRHQPRKKVAVDKGEEQTNRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN 740

Query: 781 FSSPQGSLGVDELAKLLA 796
           FSSPQGSLGVDELAKLLA
Sbjct: 781 FSSPQGSLGVDELAKLLA 740

[Close]

BLAST of Cp4.1LG11g11320 vs. NCBI nr
Match: XP_022999432.1 (CRS2-associated factor 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 1353 bits (3503), Expect = 0.0
Identity = 709/796 (89.07%), Postives = 721/796 (90.58%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LT+IRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTDIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+A VSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPW 
Sbjct: 181 EMPIGVEANVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWM 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRG IKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGSIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELV++NCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVRVNCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPY+ RNPVGAKAR TNEGTI+APSIEEREASVEN
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYVERNPVGAKARGTNEGTISAPSIEEREASVEN 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLID DLMSLGSAGLSTGGNEELDPLVAEKSVSAD +SLTAMM KSNSLA+ADDMEATG
Sbjct: 541 TSLIDQDLMSLGSAGLSTGGNEELDPLVAEKSVSADFDSLTAMMRKSNSLANADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK 660
           SDVQEMNTD+TCDDSES S MSGGETETDSGHE SDFDEAEPMEQSR NAIAAAGNLETK
Sbjct: 601 SDVQEMNTDSTCDDSESWSTMSGGETETDSGHENSDFDEAEPMEQSRFNAIAAAGNLETK 660

Query: 661 VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP 720
                        PASY MDGVLQLLKQA+ENGGALVLDDSSLDADV+YRRAVAFSQSAP
Sbjct: 661 -------------PASYAMDGVLQLLKQAVENGGALVLDDSSLDADVIYRRAVAFSQSAP 720

Query: 721 PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 780
           P PVFRHQP+KKVAVDKG EQTSRELE VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS
Sbjct: 721 PEPVFRHQPKKKVAVDKGPEQTSRELE-VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 737

Query: 781 SPQGSLGVDELAKLLA 796
           SPQGSLGVDELAKLLA
Sbjct: 781 SPQGSLGVDELAKLLA 737

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy TrEMBL
Match: A0A6J1KD01 (CRS2-associated factor 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493806 PE=4 SV=1)

HSP 1 Score: 1387 bits (3589), Expect = 0.0
Identity = 722/796 (90.70%), Postives = 734/796 (92.21%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LT+IRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTDIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+A VSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPW 
Sbjct: 181 EMPIGVEANVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWM 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRG IKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGSIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELV++NCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVRVNCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPY+ RNPVGAKAR TNEGTI+APSIEEREASVEN
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYVERNPVGAKARGTNEGTISAPSIEEREASVEN 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLID DLMSLGSAGLSTGGNEELDPLVAEKSVSAD +SLTAMM KSNSLA+ADDMEATG
Sbjct: 541 TSLIDQDLMSLGSAGLSTGGNEELDPLVAEKSVSADFDSLTAMMRKSNSLANADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK 660
           SDVQEMNTD+TCDDSES S MSGGETETDSGHE SDFDEAEPMEQSR NAIAAAGNLETK
Sbjct: 601 SDVQEMNTDSTCDDSESWSTMSGGETETDSGHENSDFDEAEPMEQSRFNAIAAAGNLETK 660

Query: 661 VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP 720
           VGGTSEATQALNKPASY MDGVLQLLKQA+ENGGALVLDDSSLDADV+YRRAVAFSQSAP
Sbjct: 661 VGGTSEATQALNKPASYAMDGVLQLLKQAVENGGALVLDDSSLDADVIYRRAVAFSQSAP 720

Query: 721 PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 780
           P PVFRHQP+KKVAVDKG EQTSRELE VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS
Sbjct: 721 PEPVFRHQPKKKVAVDKGPEQTSRELE-VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 750

Query: 781 SPQGSLGVDELAKLLA 796
           SPQGSLGVDELAKLLA
Sbjct: 781 SPQGSLGVDELAKLLA 750

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy TrEMBL
Match: A0A6J1G509 (CRS2-associated factor 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450747 PE=4 SV=1)

HSP 1 Score: 1373 bits (3554), Expect = 0.0
Identity = 722/798 (90.48%), Postives = 730/798 (91.48%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+AKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT
Sbjct: 181 EMPIGVEAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRK+GRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKRGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPYI RNPVGAKAR TNEGTIAAPSIEEREASVE+
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIERNPVGAKARGTNEGTIAAPSIEEREASVED 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLIDHDLMSLGSAGLS  GNEELDPLVAEKSVSADV+SLTAMM +SNSLADADDMEATG
Sbjct: 541 TSLIDHDLMSLGSAGLSARGNEELDPLVAEKSVSADVDSLTAMMGESNSLADADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETET--DSGHEYSDFDEAEPMEQSRLNAIAAAGNLE 660
           SDVQEMNTD+TCDD+ESSSAMSGGETET  DSGHE SDFDEAEPMEQSRLNAIAAAGNLE
Sbjct: 601 SDVQEMNTDSTCDDTESSSAMSGGETETETDSGHENSDFDEAEPMEQSRLNAIAAAGNLE 660

Query: 661 TKVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS 720
           TK             PASY MDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS
Sbjct: 661 TK-------------PASYAMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQS 720

Query: 721 APPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN 780
           APPAPVFRHQPRKKVAVDKGEEQT+RELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN
Sbjct: 721 APPAPVFRHQPRKKVAVDKGEEQTNRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYN 740

Query: 781 FSSPQGSLGVDELAKLLA 796
           FSSPQGSLGVDELAKLLA
Sbjct: 781 FSSPQGSLGVDELAKLLA 740

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy TrEMBL
Match: A0A6J1KAV3 (CRS2-associated factor 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493806 PE=4 SV=1)

HSP 1 Score: 1353 bits (3503), Expect = 0.0
Identity = 709/796 (89.07%), Postives = 721/796 (90.58%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MAFKLSFPFPIFSPQFSPNSTPSHR LT+IRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MAFKLSFPFPIFSPQFSPNSTPSHRPLTDIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFDSAARITDLCDSNSS                                          
Sbjct: 61  RRFDSAARITDLCDSNSS------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK
Sbjct: 121 ---TSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWT 240
           EMPIGV+A VSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPW 
Sbjct: 181 EMPIGVEANVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREPYAPFGPTTMPRPWM 240

Query: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300
           GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE
Sbjct: 241 GRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEE 300

Query: 301 EIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360
           EIKTLIRG IKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL
Sbjct: 301 EIKTLIRGSIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQL 360

Query: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420
           EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV
Sbjct: 361 EEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEV 420

Query: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRD 480
           TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELV++NCQGLNESDFKKIGAKLRD
Sbjct: 421 TEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVRVNCQGLNESDFKKIGAKLRD 480

Query: 481 LVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVEN 540
           LVPCVLISFESEHILLWRGKDWKSSLPY+ RNPVGAKAR TNEGTI+APSIEEREASVEN
Sbjct: 481 LVPCVLISFESEHILLWRGKDWKSSLPYVERNPVGAKARGTNEGTISAPSIEEREASVEN 540

Query: 541 TSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEATG 600
           TSLID DLMSLGSAGLSTGGNEELDPLVAEKSVSAD +SLTAMM KSNSLA+ADDMEATG
Sbjct: 541 TSLIDQDLMSLGSAGLSTGGNEELDPLVAEKSVSADFDSLTAMMRKSNSLANADDMEATG 600

Query: 601 SDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLETK 660
           SDVQEMNTD+TCDDSES S MSGGETETDSGHE SDFDEAEPMEQSR NAIAAAGNLETK
Sbjct: 601 SDVQEMNTDSTCDDSESWSTMSGGETETDSGHENSDFDEAEPMEQSRFNAIAAAGNLETK 660

Query: 661 VGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSAP 720
                        PASY MDGVLQLLKQA+ENGGALVLDDSSLDADV+YRRAVAFSQSAP
Sbjct: 661 -------------PASYAMDGVLQLLKQAVENGGALVLDDSSLDADVIYRRAVAFSQSAP 720

Query: 721 PAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 780
           P PVFRHQP+KKVAVDKG EQTSRELE VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS
Sbjct: 721 PEPVFRHQPKKKVAVDKGPEQTSRELE-VKEESAVSVERGSGKKDSKTKKKKNFGEYNFS 737

Query: 781 SPQGSLGVDELAKLLA 796
           SPQGSLGVDELAKLLA
Sbjct: 781 SPQGSLGVDELAKLLA 737

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy TrEMBL
Match: A0A5A7V1W2 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00990 PE=4 SV=1)

HSP 1 Score: 1169 bits (3023), Expect = 0.0
Identity = 617/797 (77.42%), Postives = 670/797 (84.07%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MA KL FPFPIF+PQF+PNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MALKLPFPFPIFTPQFNPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRF SA  I DLCDS+S                                           
Sbjct: 61  RRFSSATNIVDLCDSDSP------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              +SAIDRTETFRSVGTPS PSRPSIPGRKSKYSKNPNPGSP PFRQVSKTKKTM+APK
Sbjct: 121 ---SSAIDRTETFRSVGTPSSPSRPSIPGRKSKYSKNPNPGSPSPFRQVSKTKKTMNAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREP-YAPFGPTTMPRPW 240
           E  IGV+A VSLSEDGVS+VIDGAPFEFKYSYTETPKLKPIKLREP YAPFGPTTMPRPW
Sbjct: 181 ERHIGVEANVSLSEDGVSFVIDGAPFEFKYSYTETPKLKPIKLREPPYAPFGPTTMPRPW 240

Query: 241 TGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTE 300
           TGRAPLPPS+K LPEFDSFQLPPKNKKGVK VQAPGPFLAGSGPKYVMSREEILGEPLTE
Sbjct: 241 TGRAPLPPSKKKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTE 300

Query: 301 EEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ 360
           EEIK LIRGCIKSNRQLNIGRDGLTHNML+NIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ
Sbjct: 301 EEIKMLIRGCIKSNRQLNIGRDGLTHNMLENIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ 360

Query: 361 LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDE 420
           LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPA PVYPRL+K +PDGLTL+E
Sbjct: 361 LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPATPVYPRLIKHIPDGLTLEE 420

Query: 421 VTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLR 480
            TEMR+KGRKLIPICKLGKNGVYS LVKHVREAFEECELV+INCQG+N SDF+KIGAKL+
Sbjct: 421 ATEMRRKGRKLIPICKLGKNGVYSTLVKHVREAFEECELVRINCQGMNGSDFRKIGAKLK 480

Query: 481 DLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVE 540
           DLVPCVLISFESEHILLWRG+DWKSSLPYI RNP GAKA   NE TI APSIE+ + SVE
Sbjct: 481 DLVPCVLISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGMNETTIVAPSIEQ-DVSVE 540

Query: 541 NTSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEAT 600
           NT      L SL S GLSTGGNE+ D ++AEKS+SADV+SLT MMH+ NS++   DME+T
Sbjct: 541 NT------LTSLDSRGLSTGGNEDPDSMIAEKSISADVDSLTTMMHEINSVSY--DMEST 600

Query: 601 GSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLET 660
            SD Q ++   T +D +S S MSGGE+E +SG+EYSDFDEAEPMEQS  ++IAA GN ET
Sbjct: 601 ASDDQTLHISTTSEDLDSWSTMSGGESEIESGYEYSDFDEAEPMEQSEFDSIAATGNSET 660

Query: 661 KVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSA 720
            V  TSE +QALNKP S   DGVLQLLKQA+ENG A+VLD SSLDADVVY+++VAFSQSA
Sbjct: 661 NVVYTSEGSQALNKPTSNATDGVLQLLKQAVENGSAVVLDSSSLDADVVYQQSVAFSQSA 720

Query: 721 PPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNF 780
           PP+PVF+H+ RKKVA DK +E+TSRELE  +EE+A     G+ KKDSKTKKKKNFG+YNF
Sbjct: 721 PPSPVFKHERRKKVAADKSKEETSRELEVKEEETA-----GNEKKDSKTKKKKNFGDYNF 738

Query: 781 SSPQGSLGVDELAKLLA 796
           SSPQGSLGVDELAKLLA
Sbjct: 781 SSPQGSLGVDELAKLLA 738

[Close]

BLAST of Cp4.1LG11g11320 vs. ExPASy TrEMBL
Match: A0A5D3CGT6 (CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00460 PE=4 SV=1)

HSP 1 Score: 1168 bits (3021), Expect = 0.0
Identity = 617/797 (77.42%), Postives = 669/797 (83.94%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           MA KL FPFPIF+PQF+PNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE
Sbjct: 1   MALKLPFPFPIFTPQFNPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRF SA  I DLCDS+S                                           
Sbjct: 61  RRFSSATNIVDLCDSDSP------------------------------------------ 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
              +SAIDRTETFRSVGTPS PSRPSIPGRKSKYSKNPNPGSP PFRQVSKTKKTM+APK
Sbjct: 121 ---SSAIDRTETFRSVGTPSSPSRPSIPGRKSKYSKNPNPGSPSPFRQVSKTKKTMNAPK 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREP-YAPFGPTTMPRPW 240
           E  IGV+A VSLSEDGVS+VIDGAPFEFKYSYTETPKLKPIKLREP YAPFGPTTMPRPW
Sbjct: 181 ERHIGVEANVSLSEDGVSFVIDGAPFEFKYSYTETPKLKPIKLREPPYAPFGPTTMPRPW 240

Query: 241 TGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTE 300
           TGRAPLPPS+K LPEFDSFQLPPKNKKGVK VQAPGPFLAGSGPKYVMSREEILGEPLTE
Sbjct: 241 TGRAPLPPSKKKLPEFDSFQLPPKNKKGVKPVQAPGPFLAGSGPKYVMSREEILGEPLTE 300

Query: 301 EEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ 360
           EEIK LIRGCIKSNRQLNIGRDGLTHNML+NIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ
Sbjct: 301 EEIKMLIRGCIKSNRQLNIGRDGLTHNMLENIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ 360

Query: 361 LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDE 420
           LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPA PVYPRL+K +PDGLTL+E
Sbjct: 361 LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPATPVYPRLIKHIPDGLTLEE 420

Query: 421 VTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLR 480
            TEMR+KGRKLIPICKLGKNGVYS LVKHVREAFEECELV+INCQG+N SDF+KIGAKL+
Sbjct: 421 ATEMRRKGRKLIPICKLGKNGVYSTLVKHVREAFEECELVRINCQGMNGSDFRKIGAKLK 480

Query: 481 DLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVE 540
           DLVPCVLISFESEHILLWRG+DWKSSLPYI RNP GAKA   NE TI APSIE+ + SVE
Sbjct: 481 DLVPCVLISFESEHILLWRGRDWKSSLPYIERNPEGAKAHGMNETTIVAPSIEQ-DVSVE 540

Query: 541 NTSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEAT 600
           NT      L SL S GLSTGGNE+ D ++AEKS+SADV+SLT MMH+ NS++   DME+T
Sbjct: 541 NT------LTSLDSRGLSTGGNEDPDSMIAEKSISADVDSLTTMMHEINSVSY--DMEST 600

Query: 601 GSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLET 660
            SD Q ++   T +D +S S MSGGE+E +SG+EYSDFDEAEPME S  ++IAA GN ET
Sbjct: 601 ASDDQTLHISTTSEDLDSWSTMSGGESEIESGYEYSDFDEAEPMEPSEFDSIAATGNSET 660

Query: 661 KVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSA 720
            V  TSE +QALNKP S   DGVLQLLKQA+ENG A+VLD SSLDADVVY+R+VAFSQSA
Sbjct: 661 NVVYTSEGSQALNKPTSNATDGVLQLLKQAVENGSAVVLDSSSLDADVVYQRSVAFSQSA 720

Query: 721 PPAPVFRHQPRKKVAVDKGEEQTSRELEEVKEESAVSVERGSGKKDSKTKKKKNFGEYNF 780
           PP+PVF+H+ RKKVA DK +E+TSRELE  +EE+A     G+ KKDSKTKKKKNFG+YNF
Sbjct: 721 PPSPVFKHERRKKVAADKSKEETSRELEVKEEETA-----GNEKKDSKTKKKKNFGDYNF 738

Query: 781 SSPQGSLGVDELAKLLA 796
           SSPQGSLGVDELAKLLA
Sbjct: 781 SSPQGSLGVDELAKLLA 738

[Close]

BLAST of Cp4.1LG11g11320 vs. TAIR 10
Match: AT2G20020.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 656.8 bits (1693), Expect = 2.3e-188
Identity = 404/819 (49.33%), Postives = 499/819 (60.93%), Query Frame = 0


Query: 1   MAFKLSFPFPIFSPQFSPNSTPSHRTLTEIRFSRWNNANAEKFEQRRRSQQEIEDEIRRE 60
           M+ KL+ PFPIF+P   PN  P  R  +EIRFSRW NANAE+FEQRRRSQ+E+E EIRR+
Sbjct: 1   MSLKLNTPFPIFAPSLFPNHNP--RAPSEIRFSRWGNANAERFEQRRRSQEELEAEIRRD 60

Query: 61  RRFDSAARITDLCDSNSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPXS 120
           RRFD+A +I    DS ++ +A  +T  FRS GTPS PS  SIPGR+SKYSK P+ G    
Sbjct: 61  RRFDAATKIVHTHDSEAA-AAEPKTSPFRSRGTPSLPSARSIPGRRSKYSK-PDSG---- 120

Query: 121 NSSTSAIDRTETFRSVGTPSYPSRPSIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPK 180
                                P+RP         +K   P SPP                
Sbjct: 121 ---------------------PNRPK--------NKPRVPDSPP---------------- 180

Query: 181 EMPIGVKAKVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREP-YAPFGPTTMPRPW 240
              +  K +V LSEDG++YVI+GAPFEFKYSYTETPK+KP+KLREP YAPFGPTTM RPW
Sbjct: 181 --QLDAKPEVKLSEDGLTYVINGAPFEFKYSYTETPKVKPLKLREPAYAPFGPTTMGRPW 240

Query: 241 TGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTE 300
           TGRAPLP SQK   EFDSF+LPP  KKG+K VQ PGPF  G GP+YV S+EEILGEPLT+
Sbjct: 241 TGRAPLPQSQKTPREFDSFRLPPVGKKGLKPVQKPGPFRPGVGPRYVYSKEEILGEPLTK 300

Query: 301 EEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQ 360
           EE++ L+  C+K+ RQLN+GRDGLTHNML+NIH  WKRRRVCKIKCKGVCTVDMDNV +Q
Sbjct: 301 EEVRELVTSCLKTTRQLNMGRDGLTHNMLNNIHDLWKRRRVCKIKCKGVCTVDMDNVCEQ 360

Query: 361 LEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDE 420
           LEEK GGK+IY RGG L+L+RGRNYN++TRPRFPLMLWKP APVYPRL++QVP+GLT  E
Sbjct: 361 LEEKIGGKVIYRRGGVLFLFRGRNYNHRTRPRFPLMLWKPVAPVYPRLIQQVPEGLTRQE 420

Query: 421 VTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLR 480
            T MR+KGR+L+PICKLGKNGVY +LVK+V+EAFE CELV+I+CQG+  SDF+KIGAKL+
Sbjct: 421 ATNMRRKGRELMPICKLGKNGVYCDLVKNVKEAFEVCELVRIDCQGMKGSDFRKIGAKLK 480

Query: 481 DLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGTIAAPSIEEREASVE 540
           DLVPCVL+SFE+E IL+WRG++WKSSL    +        E  E   A P  +E   S  
Sbjct: 481 DLVPCVLVSFENEQILIWRGREWKSSLTTPDKK---GDILEDIEVDTALPEDDEPSVSPN 540

Query: 541 NTSLIDHDLMSLGSAGLSTGGNEELDPLVAEKSVSADVESLTAMMHKSNSLADADDMEAT 600
            +  +                N  LD +  E     D   L      S S  D+ +ME T
Sbjct: 541 QSQTMTQ--------------NPPLDSM--ELQNDPDGHDL------SPSTVDSSEMEGT 600

Query: 601 GSDVQEMNTDNTCDDSESSSAMSGGETETDSGHEYSDFDEAEPMEQSRLNAIAAAGNLET 660
            + +Q  +T +  + +  S      E E          DE E  E+              
Sbjct: 601 INSLQSWSTKDVTEPTVDSFLRDLEEPE----------DEPETSEEI------------- 660

Query: 661 KVGGTSEATQALNKPASYTMDGVLQLLKQAIENGGALVLDDSSLDADVVYRRAVAFSQSA 720
                          +  +++ VL L+KQA+E+G ALVLD + LDAD V+ +AVAFS  A
Sbjct: 661 ---------------SKQSIERVLILMKQAVESGTALVLDAADLDADTVFSKAVAFSSVA 701

Query: 721 PPAPVFRHQPRKKVAVDKGEEQ----------------------TSRELEEVKEESAVSV 780
            P PVF+H  RK+  V K E Q                      +S  +   K E A   
Sbjct: 721 SPGPVFQHGLRKQPTVKKQESQEFGYGDLEAKSSNVVVSRNASKSSNVVVFGKREVAERG 701

Query: 781 ERGSGKKDSKTKKKKNFGEYNFSSPQGSLGVDELAKLLA 797
           ER   ++ SK K  +   +Y    P G+L VDELAKLLA
Sbjct: 781 EREEKEEGSKKKMDEFAEDYREVMPHGTLKVDELAKLLA 701

[Close]

BLAST of Cp4.1LG11g11320 vs. TAIR 10
Match: AT1G23400.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 425.6 bits (1093), Expect = 8.6e-119
Identity = 249/533 (46.72%), Postives = 329/533 (61.73%), Query Frame = 0


Query: 115 PGSPXSNSSTSAIDRTETFR---SVGTPSYPSRPSIPGRKSKYSKNPNPGSP---PPFRQ 174
           P +P    S+S      TFR    +  P Y        +K+ +  + NP  P   P  + 
Sbjct: 17  PSTPPMADSSSG-----TFRPAPPIPIPKYAPSNRNRNQKTNHQTDTNPKKPQSNPALKL 76

Query: 175 VSKTKKTMSAPKEMPIGVKA--KVSLSEDGVSYVIDGAPFEFKYSYTETPKLKPIKLREP 234
                +     KE  I       + + + GVSY + GAPFEF++SY+ETPK+KP+ +REP
Sbjct: 77  PHHRTRYYKPVKEGVISSDGDRTILIGDSGVSYQLPGAPFEFQFSYSETPKVKPVGIREP 136

Query: 235 -YAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLAGSGPKY 294
            + PF P TMPRPWTG+APL  S+K +P FDSF  PP  K GVK V+ PGP   G  PK 
Sbjct: 137 AFMPFAPPTMPRPWTGKAPLKKSKKKIPLFDSFNPPPAGKSGVKYVEMPGPLPFGRYPKE 196

Query: 295 VMSREEILGEPLTEEEIKTLIRGCIKSNRQLNIGRDGLTHNMLDNIHAHWKRRRVCKIKC 354
            M+REE+LGEPL   E   LI+  +  NRQ+N+GRDG THNML+ IH+HWKRRRVCK++C
Sbjct: 197 GMNREEVLGEPLKRWEKGMLIKPHMHDNRQVNLGRDGFTHNMLELIHSHWKRRRVCKVRC 256

Query: 355 KGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLWKPAAPVYP 414
           KGV TVDM+NV + LEEKTGG+II+  GG +YL+RGRNYNY+TRP++PLMLWKPAAPVYP
Sbjct: 257 KGVPTVDMNNVCRVLEEKTGGEIIHRVGGVVYLFRGRNYNYRTRPQYPLMLWKPAAPVYP 316

Query: 415 RLLKQVPDGLTLDEVTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECELVKINCQG 474
           +L+++VP+GLT +E  E R KG+ L PICKL KNGVY +LVK VR+AFE   LVK++C G
Sbjct: 317 KLIQEVPEGLTKEEAHEFRVKGKSLRPICKLSKNGVYVSLVKDVRDAFELSSLVKVDCPG 376

Query: 475 LNESDFKKIGAKLRDLVPCVLISFESEHILLWRGKDWKSSLPYIVRNPVGAKARETNEGT 534
           L  SD+KKIGAKL++LVPCVL+SF+ E IL+WRG++WKS     V NP+     ETN   
Sbjct: 377 LEPSDYKKIGAKLKELVPCVLLSFDDEQILMWRGREWKSR---FVDNPLIPSLSETNTTN 436

Query: 535 IAAPS---IEEREASVENTSLIDHDLMSLGSAGLSTG----------GNEELDPLVAE-K 594
              PS    EE+  +  +T++    ++SL    L +           G ++L   V E +
Sbjct: 437 ELDPSDKPSEEQTVANPSTTISSPKMISLWQRALESSKAVILEELDLGPDDLLKKVEELE 496

Query: 595 SVSADVESLTAMMHKSNSLADADD-------MEATGSDVQEMNTDNTCDDSES 618
             S   E     M  SN+   A+D        E   SD+ + + D+ C D ES
Sbjct: 497 GTSLAAEHTYTAMVLSNTDGAAEDYVDEKDRSEEYYSDIDD-DFDDECSDDES 540

[Close]

BLAST of Cp4.1LG11g11320 vs. TAIR 10
Match: AT4G31010.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 287.7 bits (735), Expect = 2.8e-77
Identity = 162/362 (44.75%), Postives = 213/362 (58.84%), Query Frame = 0


Query: 146 SIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPKEMPIGVKAKVSLSEDGVSYVIDGAP 205
           S P   S  S+NP+      F Q +  KK        P         S +GV  V    P
Sbjct: 39  SPPPLSSSASENPD------FNQKNNNKKKPKPQYRPP--------SSLEGVKTVHSDLP 98

Query: 206 FEFKYSYTET-PKLKPIKLREP-YAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPPK 265
           F+F++SYTE+   ++PI LREP Y+PFGP  + R WTG    P     +   D  + P  
Sbjct: 99  FDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTG-VCAPAVNPKVESVDGVEDPKL 158

Query: 266 NKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEEEIKTLIRGC--IKSNRQLNIGRD 325
            +K  K                   RE+I G  LTE E K L+  C   K+ RQ+N+GRD
Sbjct: 159 EEKRRKV------------------REKIQGASLTEAERKFLVELCQRNKTKRQVNLGRD 218

Query: 326 GLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRG 385
           GLTHNML++++ HWK     ++KC GV T+DM NV   LE+KT G+++    G L LYRG
Sbjct: 219 GLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRG 278

Query: 386 RNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEVTEMRKKGRKLIPICKLGKNGV 445
           RNY+ K RP+ PLMLWKP  PVYPRL+K   DGL++DE   MRKKG  +  + KL KNG 
Sbjct: 279 RNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLAKNGY 338

Query: 446 YSNLVKHVREAFEECELVKINCQGLNESDFKKIGAKLRDLVPCVLISFESEHILLWRGKD 504
           Y +LV  VR+AF   ELV+I+C GL   D+KKIGAKLRDLVPC+L++F+ E +++WRGKD
Sbjct: 339 YGSLVPMVRDAFLVSELVRIDCLGLERKDYKKIGAKLRDLVPCILVTFDKEQVVIWRGKD 367

[Close]

BLAST of Cp4.1LG11g11320 vs. TAIR 10
Match: AT5G54890.1 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 6.4e-74
Identity = 154/343 (44.90%), Postives = 204/343 (59.48%), Query Frame = 0


Query: 164 PPFRQVSKTKKTMSAPKEMPIGVKAKVS-LSEDGVSYVIDGAPFEFKYSYTET-PKLKPI 223
           PPF  +SK  K     K+     + + S L  D    VI   PF+F+YSY+ET P+++PI
Sbjct: 36  PPFSPLSKPTKPPKEKKKQKTKKQDQSSELVNDLKIPVISDLPFDFRYSYSETNPEIEPI 95

Query: 224 KLREP--YAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPPKNKKGVKTVQAPGPFLA 283
             REP  ++PFGP  + R WTG   L       PE D  Q                    
Sbjct: 96  GFREPKRFSPFGPGRLDRKWTGTTALAS-----PEIDQSQ-------------------- 155

Query: 284 GSGPKYVMSREEILGEPLTEEEIKTLIRGCIKSN--RQLNIGRDGLTHNMLDNIHAHWKR 343
                +V  R  +LGE LTE+E+  LI     S+  RQ+N+G+ G+THNM+D+IH HWK+
Sbjct: 156 -----WVEERARVLGETLTEDEVTELIERYRHSDCTRQINLGKGGVTHNMIDDIHNHWKK 215

Query: 344 RRVCKIKCKGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRGRNYNYKTRPRFPLMLW 403
               +IKC GV T+DMDN+   LEEK+GGKI+Y     L LYRGRNY+ K+RP  PLMLW
Sbjct: 216 AEAVRIKCLGVPTLDMDNICFHLEEKSGGKIVYRNINILVLYRGRNYDPKSRPIIPLMLW 275

Query: 404 KPAAPVYPRLLKQVPDGLTLDEVTEMRKKGRKLIPICKLGKNGVYSNLVKHVREAFEECE 463
           KP  P+YPRL+K V DGL  +E  EMR +G     + KL +NGVY N+V  VRE FE  E
Sbjct: 276 KPHPPIYPRLVKNVADGLEFEETKEMRNRGLHSPALMKLTRNGVYVNVVGRVREEFETEE 335

Query: 464 LVKINCQGLNESDFKKIGAKLRDLVPCVLISFESEHILLWRGK 501
           +V+++C  +  SD K+IG KL+++VPCV I F+ E I+LWRGK
Sbjct: 336 IVRLDCTHVGMSDCKRIGVKLKEMVPCVPILFKDEQIILWRGK 348

[Close]

BLAST of Cp4.1LG11g11320 vs. TAIR 10
Match: AT4G31010.2 (RNA-binding CRS1 / YhbY (CRM) domain-containing protein )

HSP 1 Score: 198.4 bits (503), Expect = 2.2e-50
Identity = 123/296 (41.55%), Postives = 161/296 (54.39%), Query Frame = 0


Query: 146 SIPGRKSKYSKNPNPGSPPPFRQVSKTKKTMSAPKEMPIGVKAKVSLSEDGVSYVIDGAP 205
           S P   S  S+NP+      F Q +  KK        P         S +GV  V    P
Sbjct: 39  SPPPLSSSASENPD------FNQKNNNKKKPKPQYRPP--------SSLEGVKTVHSDLP 98

Query: 206 FEFKYSYTET-PKLKPIKLREP-YAPFGPTTMPRPWTGRAPLPPSQKNLPEFDSFQLPPK 265
           F+F++SYTE+   ++PI LREP Y+PFGP  + R WTG    P     +   D  + P  
Sbjct: 99  FDFRFSYTESCSNVRPIGLREPKYSPFGPDRLDREWTG-VCAPAVNPKVESVDGVEDPKL 158

Query: 266 NKKGVKTVQAPGPFLAGSGPKYVMSREEILGEPLTEEEIKTLIRGC--IKSNRQLNIGRD 325
            +K  K                   RE+I G  LTE E K L+  C   K+ RQ+N+GRD
Sbjct: 159 EEKRRKV------------------REKIQGASLTEAERKFLVELCQRNKTKRQVNLGRD 218

Query: 326 GLTHNMLDNIHAHWKRRRVCKIKCKGVCTVDMDNVKQQLEEKTGGKIIYSRGGALYLYRG 385
           GLTHNML++++ HWK     ++KC GV T+DM NV   LE+KT G+++    G L LYRG
Sbjct: 219 GLTHNMLNDVYNHWKHAEAVRVKCLGVPTLDMKNVIFHLEDKTFGQVVSKHSGTLVLYRG 278

Query: 386 RNYNYKTRPRFPLMLWKPAAPVYPRLLKQVPDGLTLDEVTEMRKKGRKLIPICKLG 438
           RNY+ K RP+ PLMLWKP  PVYPRL+K   DGL++DE   MRKKG  +  + KLG
Sbjct: 279 RNYDPKKRPKIPLMLWKPHEPVYPRLIKTTIDGLSIDETKAMRKKGLAVPALTKLG 301

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g11320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SL79	3.2e-187	49.33	CRS2-associated factor 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g2...	[more]
Q5VMQ5	3.6e-154	48.28	CRS2-associated factor 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]
Q84N49	9.8e-144	45.20	CRS2-associated factor 1, chloroplastic OS=Zea mays OX=4577 GN=CAF1 PE=1 SV=1	[more]
Q9LDA9	1.2e-117	46.72	CRS2-associated factor 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g2...	[more]
Q657G7	2.2e-103	46.64	CRS2-associated factor 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of Cp4.1LG11g11320 vs. NCBI nr


Match Name	Identity	Description
XP_023547205.1	94.35	CRS2-associated factor 1, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] ...	[more]
KAG6599466.1	91.85	CRS2-associated factor 1, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022999431.1	90.70	CRS2-associated factor 1, chloroplastic isoform X1 [Cucurbita maxima]	[more]
XP_022946780.1	90.48	CRS2-associated factor 1, chloroplastic [Cucurbita moschata]	[more]
XP_022999432.1	89.07	CRS2-associated factor 1, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g11320 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1KD01	90.70	CRS2-associated factor 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1G509	90.48	CRS2-associated factor 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KAV3	89.07	CRS2-associated factor 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 G...	[more]
A0A5A7V1W2	77.42	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3CGT6	77.42	CRS2-associated factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of Cp4.1LG11g11320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20020.1	2.3e-188	49.33	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT1G23400.1	8.6e-119	46.72	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.1	2.8e-77	44.75	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT5G54890.1	6.4e-74	44.90	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]
AT4G31010.2	2.2e-50	41.55	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 40..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 720..784
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 587..641
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 600..627
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 728..773
None	No IPR available	PANTHER	PTHR46247:SF1	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 1..121 coord: 123..795
IPR001890	RNA-binding, CRM domain	SMART	SM01103	CRS1_YhbY_2	coord: 296..379 e-value: 3.2E-22 score: 89.8 coord: 414..497 e-value: 7.9E-16 score: 68.6
IPR001890	RNA-binding, CRM domain	PFAM	PF01985	CRS1_YhbY	coord: 415..497 e-value: 1.1E-15 score: 57.6 coord: 296..379 e-value: 3.6E-21 score: 75.1
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 294..390 score: 19.297188
IPR001890	RNA-binding, CRM domain	PROSITE	PS51295	CRM	coord: 412..508 score: 17.730246
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 295..390 e-value: 7.0E-23 score: 82.5
IPR035920	YhbY-like superfamily	GENE3D	3.30.110.60		coord: 414..509 e-value: 2.8E-19 score: 71.0
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 414..503
IPR035920	YhbY-like superfamily	SUPERFAMILY	75471	YhbY-like	coord: 295..389
IPR044599	CRS2-associated factor, plant	PANTHER	PTHR46247	CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC	coord: 1..121 coord: 123..795

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g11320.1	Cp4.1LG11g11320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding