Cp4.1LG11g10620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAGTAAAGAGATGAAGCAACAGCTGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGCGAAGGGAATTGGGCGACTGTCTCCCAGGAATCAGGTAAATTTGGCCACAAAAATGTCTAATAACCAATATAAAATGTGCCAGCCATTTCTATATCCGCTACTATATTCATCTTTCTCAGAACTCTATAGCACGATGGATGGAGTTTTTAAAAATGTTACACATATATCAGGAATTAGAGTTTTCATTCATGTGTGAGTGTGTGTGAGCTTTCCTCCATTGCCTCTCAGGTTTGATGCGAGGTGGGAAAAGCTGCAGGCTAAGATGGAAGAATTACCTCAGGCCTAATATAAAACGTGGGGAGATGTCCAAAGAGGAAGAGGATCTAATTATCCGTATGCATAAACTTTTAGGCAACAGGTCAGTTTGTATTGCTTTAACCTCTCAAAAGCTTAATCCATACTTACAGTAAAGAGAGATAACTTGCTGAATGTTTGGATATTTTCAACGTGTTACTTCTTGAATCAGATGGTCATTGATTGCTGGTCGGCTTCCTGGTCGAACTGATAACGAGGTGAAGAACTACTGGAATACCCATTTGAACAAGAATGGCCTGCAAGATAAAAGAAAAGCTAATGACTCAAACAGCCACAAGAAAAATGACGACGACAACGACGATGATGTGAATAATAAGAAGCAGAAGAAAGTTATCAATCAGACTTGTTATCCTCAGCCACCAATATGCATTGACAACGGGAAAAATTTGGCTCATGATACACAGAGAAGAAACCAGGAAGAGAACAGAGAAGTTACAGATCCTTGGAATATGGATGACATAACAAGTTCTCATTATAATATAAACTCTCCAATAGTACCTGCAAATGACGCGACATTTAATTTTGACGACGAGCCTTACTTTGACCACCTCGATCCCTTCTTCCTGTTAGAAGCATTTGGATGCAGTAGTGTTCATGCATCACTGGATAACATGTAA ATGGAGGAGAGTAAAGAGATGAAGCAACAGCTGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGCGAAGGGAATTGGGCGACTGTCTCCCAGGAATCAGGTAAATTTGGCCACAAAAATAGAAGAAACCAGGAAGAGAACAGAGAAGTTACAGATCCTTGGAATATGGATGACATAACAAGTTCTCATTATAATATAAACTCTCCAATAGTACCTGCAAATGACGCGACATTTAATTTTGACGACGAGCCTTACTTTGACCACCTCGATCCCTTCTTCCTGTTAGAAGCATTTGGATGCAGTAGTGTTCATGCATCACTGGATAACATGTAA ATGGAGGAGAGTAAAGAGATGAAGCAACAGCTGAAGAAAAATTTGTGGAAACCAGAAGAAGATTTGATCCTCAGAAACTATGTGGAAACTCATGGCGAAGGGAATTGGGCGACTGTCTCCCAGGAATCAGGTAAATTTGGCCACAAAAATAGAAGAAACCAGGAAGAGAACAGAGAAGTTACAGATCCTTGGAATATGGATGACATAACAAGTTCTCATTATAATATAAACTCTCCAATAGTACCTGCAAATGACGCGACATTTAATTTTGACGACGAGCCTTACTTTGACCACCTCGATCCCTTCTTCCTGTTAGAAGCATTTGGATGCAGTAGTGTTCATGCATCACTGGATAACATGTAA MEESKEMKQQLKKNLWKPEEDLILRNYVETHGEGNWATVSQESGKFGHKNRRNQEENREVTDPWNMDDITSSHYNINSPIVPANDATFNFDDEPYFDHLDPFFLLEAFGCSSVHASLDNM Homology
BLAST of Cp4.1LG11g10620 vs. ExPASy Swiss-Prot
Match: Q9LTF7 (Transcription factor MYB82 OS=Arabidopsis thaliana OX=3702 GN=MYB82 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-08 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy Swiss-Prot
Match: Q9SPG3 (Transcription factor MYB26 OS=Arabidopsis thaliana OX=3702 GN=MYB26 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.9e-04 Identity = 18/41 (43.90%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy Swiss-Prot
Match: Q8GYP5 (Transcription factor MYB60 OS=Arabidopsis thaliana OX=3702 GN=MYB60 PE=1 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.7e-04 Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. NCBI nr
Match: XP_023545990.1 (transcription factor MYB82 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 185 bits (470), Expect = 1.74e-56 Identity = 116/241 (48.13%), Postives = 116/241 (48.13%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. NCBI nr
Match: XP_022946431.1 (transcription factor MYB82 [Cucurbita moschata]) HSP 1 Score: 181 bits (460), Expect = 5.72e-55 Identity = 114/241 (47.30%), Postives = 115/241 (47.72%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. NCBI nr
Match: KAG7030370.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 180 bits (457), Expect = 1.63e-54 Identity = 114/241 (47.30%), Postives = 115/241 (47.72%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. NCBI nr
Match: KAG6599384.1 (Transcription factor MYB82, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 180 bits (457), Expect = 2.32e-54 Identity = 114/241 (47.30%), Postives = 115/241 (47.72%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. NCBI nr
Match: XP_022999279.1 (transcription factor MYB82 [Cucurbita maxima]) HSP 1 Score: 177 bits (450), Expect = 1.87e-53 Identity = 115/241 (47.72%), Postives = 116/241 (48.13%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy TrEMBL
Match: A0A0A0LF88 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G007440 PE=4 SV=1) HSP 1 Score: 188 bits (478), Expect = 4.50e-59 Identity = 103/163 (63.19%), Postives = 108/163 (66.26%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy TrEMBL
Match: A0A6J1G3P0 (transcription factor MYB82 OS=Cucurbita moschata OX=3662 GN=LOC111450489 PE=4 SV=1) HSP 1 Score: 181 bits (460), Expect = 2.77e-55 Identity = 114/241 (47.30%), Postives = 115/241 (47.72%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy TrEMBL
Match: A0A6J1KGL3 (transcription factor MYB82 OS=Cucurbita maxima OX=3661 GN=LOC111493699 PE=4 SV=1) HSP 1 Score: 177 bits (450), Expect = 9.06e-54 Identity = 115/241 (47.72%), Postives = 116/241 (48.13%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy TrEMBL
Match: A0A6J1FGK0 (transcription factor WER-like OS=Cucurbita moschata OX=3662 GN=LOC111443992 PE=4 SV=1) HSP 1 Score: 163 bits (413), Expect = 3.32e-48 Identity = 107/238 (44.96%), Postives = 113/238 (47.48%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. ExPASy TrEMBL
Match: A0A5D3BGT2 (Transcription factor WER-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00730 PE=4 SV=1) HSP 1 Score: 154 bits (390), Expect = 1.08e-44 Identity = 102/241 (42.32%), Postives = 108/241 (44.81%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. TAIR 10
Match: AT5G52600.1 (myb domain protein 82 ) HSP 1 Score: 60.8 bits (146), Expect = 8.4e-10 Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. TAIR 10
Match: AT3G13890.1 (myb domain protein 26 ) HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05 Identity = 18/41 (43.90%), Postives = 29/41 (70.73%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. TAIR 10
Match: AT1G74650.1 (myb domain protein 31 ) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05 Identity = 18/37 (48.65%), Postives = 26/37 (70.27%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. TAIR 10
Match: AT1G08810.1 (myb domain protein 60 ) HSP 1 Score: 44.7 bits (104), Expect = 6.2e-05 Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 0
BLAST of Cp4.1LG11g10620 vs. TAIR 10
Match: AT1G57560.1 (myb domain protein 50 ) HSP 1 Score: 44.3 bits (103), Expect = 8.1e-05 Identity = 19/37 (51.35%), Postives = 26/37 (70.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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