Cp4.1LG11g10210 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g10210
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Biotin carboxyl carrier protein of acetyl-CoA carboxylase
Location	Cp4.1LG11: 8554547 .. 8558549 (-)
RNA-Seq Expression	Cp4.1LG11g10210
Synteny	Cp4.1LG11g10210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATACGAGTCATCTCGATCATGGATGAACGTTCTTCGCCTTCAAACTATTTTGAAATTTACTTAAGATACGAGCCTCGAATCTTCAATTAATAGGTCAGAGGTTTGAATCAGGACGAGGCCCCCATTTCCCATTGGCAAGTGGCAGCAAAAGGCGAGCGAGTTAATCTTCATCTCCCCTCTTCCCACTCTCGCGCCTCATTGGTTTCATCGTCCGCCGTCCACCCGCCACCTGCCACCTGCCACCTGCAACGCCTCCTCCTTCCTTCTCCGTTGGGCGGAGTTTCCTAAGCTATACCTTTCTTTTACTTCCGACGAATCAATTTCACTTGCCCTCTCGAATCAGATTCGCTTCTTTCCAGCTAATACCCAATGGCTTCCTCGCTCGCTTCAGCCTCTGCTGCTTCCGCAGTGGCCAAATCTCCTTGCACTGCCATGGCTCGCCGCGATATCAATCACAAGAACTCTCATTGCGCGCTCTCTTTTCGGCTCCCTCACAAGCCCAAACTCCGAATCTTCACCAGGGTATGCGCCAATTCATCTCCCTCGTTGAATGATAAGTAGAATTTCTGTCCTATTTGTGCTAATTGTGGTTATTTTATGTGTTGCGTTTCTGATTTACGATTATTCCGCACTGTGATCTTCTGCGTTGCTTTTGAATTCGTTGGTGGCTACATTTGCACTTCGTGATTGAAAAAACAAACTGGAAGAATGTGTTTGGAGGGTTCTTTTAAATGAAATTTTTGGACTGTTTTATTGGTATGGAGATTTTAAGGAGTGAAAGAAATACATGAACTGCGGTGTAAACTGAGTACAAATTGTTAGGAATCACGGATCTCCACAATATTATGATATTTTCCACTCTGAGCATAAATTCTCATGGCTTTGCTTTTGGTTTCCTCAAAAGGCCTCGTACTAATAGAGATAGTATTCCTTACTTATAAACTCATGATCTTACTCTTAATTAGTTAGTGTGAGACTACTTCTCTCAATAATCCTCAATAATTCTTCACTCGAACAAAGTACACAATAGAGCCCCTGGCCTATGGAGCCCTCGAACAACCTCCCCTTAATTGAGGCTCAACTCCTTTCCCTGGAACCCTCGAACAAAGTACAACATTTGTTCTACACTTTAGTAACTTTTTGACTACACCTTCGAGGCTCACAACTTCTTTGTTCGATATTTGAGAATTGAAATGTCTAAGTTAAGGACATGGTTTTGCTACCATTTTAGGAATCACAGATCTCCACGATGGTATGATATTATTCACTTTGAGCATAAACTCTTATGGCTTTGTTTTTTGTTTCCCCGAAAGGTCTCATACCAATGGAGATGTATTCCTTACTTATAAACTCATGTTCATCTGCTTGATTGGCCAATGTGGACTCCCTCCCAATAATCCTCAACAATGCACATATTAACTTTGTCACCGTTAAAGAATGTGATTTAAGCATTATGTTGCAGGGTGTGCAGCCTGTTCGTAAGCATCTAACTCCTGTACAGGCACAGTTGAATGAGGTATGTATGCTTACATCAAATTATTATATCAAATAGGATTTTATTTTGTTGAAGTATTCACTCTTTCCTAACGTGCTGTTCTTGAAGTCGTCTATTTCATTGAAGGATCCTGTTGATGCACCTAATGCTGCAAAAGTTTCATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCCAAACCATTGAGTGATCCATCTTCTAAAGCTTTGGCAACGGAAGAGTCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAGTTAGCTAGCTCAATCTGTGACCTTTTCCTCTAAAATAACCCACACATGGATGTGGTATAACATTTTTTTACCTGCTTGCAGACTGGTTGATTCCAGAGATATTGTAGAGCTGCAATTGAAACAGTTCGACTGTGAAGTGATGATCCGGAAAAAGGAGGCCTTACCACAACCGCCGCCTCCTGCTGCCATTCCTATGCCGTATGCACCCCCACCTTCAGTAGCACAGTCAGTTCCTCCCCCTGTGCCTGCTGCACTGCCAGCGCCCGCTTCTCCTGTTTCAAGCCTGCCATCCTCAACTCCTGCTGCTAAGTCGGCCAAGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCAGGCACATTCTACCGTAGTCCAGGACCTGGGGAGCCACCATTTGTTAAGGTAAGTTTATTGGAATGGCTCTGCTGCAACTTCTTATTTGATTGTCTTGGGGCTTATTTGTGGGGTTCTTCATATAGGTTGGAGATAAAGTGCAGAAAGGACAAGTCTTGTGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGTAAGATTTCCCCTCTTCATCCATTTAAATCGAATTTTACCATCGTTAGGTTTGATCCAATTCTACCACTGCTTACTATCTCATTGTCTTACTTTAGTTTTATTTCCGTTCTCTGTTTGATTTGCTAAAAATATATTCCATACTTACCATAGTATTGTCCATTGATGCGGGAATATTGACTGTTTATGGCAACCTGATCATGGGTGAAACAACCACTTTTTTCCTCTGTAGTAAACATTCACCTCTCTTGTTACATTTCAAAGAATATGATGTGACTGAAAAATTGAGCAATAATTGTGAGATCCTACATCGGTTGGGGGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAATCTCTCCCTAGCAGACGCATTTTAAAACCTTAAGTCTGACAGCTATATGTGGGCCAAATCGAACAATATTTGCTAGTGGTGGGCTTGGGATGTTTCAAATGGTATCAAAGCCAGTATGCCAGCGAGGACGCTGCGCTACCAATAGGGGTGGATTGTGAGATTCCACATCAGTTGGGGAGGGAAACAGAGCATTCCTTATAAGGGTGTGGAAACCTTTCCCTAGTAGACGTGTCTCAAAAATGTGAGGTTGACGACAGTACGTAATGGGCCAAAGCGAACAATATTTGCTAGTAGTGGGTTTGGACTGTTTTAAAGGTGCACACAAATAAGTTGGTTTTGGAACATGAAATAAAGTTGGGAACACCATTTGAACCTTTATATATAACATCATTTAACTGTGAATATAAATAATTGATGATTCACAAATAGGAAAAGGGATCATTATTAGTGTGAAAGTGTTTATAGAGAGGAGTTGATGAGAGAGAAAGTGTTAAATCTAGACCTAAAAGTTTAAGCTAATAGTTTAAAGGAAATTTAATTATGTCAATATTTCAACTCTCCTCTCCCTTGTGGATTGGGAAATTTGAATAGAGCTCAAACAAGCCTAAACTAATATTAGTTCGAAATGAATGGCATTACACGGGTTTGAACATAGAAGCTCCTCTTATGATACCATGTTAAATCACCCACGAAACTCATAAGCTTAAGCTGACGGGTTATGATAGATTTAATTATATCAATATTTCAACAAAAGGTTCGAGAAAATTAGCAAGAAGGTGTGTTTACAATAGAGTAGAACTTCGATAGACCTTGTTTGATTTTCTTGTATTATTAGCTAATCTCTGCTCTTAAAAAAAATTAATTTACAGGCCGATCAATCTGGAACCATAGTCGAGGTTATTGCAGAGGACGGGAAGCCTGTCAGCGTCGGTGTGGTAAGTCATTCTAACCACCATTACAGTTACTGTAATGAATAGCTGAACTCTACATTGTTTGTTTGTATGGATTTGTGGGCTTGAACCTTCTTCTGGTTTCTCTGCAGCCTTTGTTTGTCATTCAACCTTAGGCCAATCCGGGTTTCGATTACACGAGACGAGTAAAGGAGATGAGATTAAGCTGAGTTTGGGAAGCAAATTGAGTTTCCGAGCAAGTTCGGGTTGTGGGTTAGTTATTGGTAGTGTCCTTTTTCCCCCTTCTTCCTTCGTTTTCCTCTTCAGTTGAGCGTAGACATGATAGAGATTGTGTTGATAAACATATCAATTCCTTTTCCAGTTTTCGTGTGAACTTTCAACTTTCTTCGTGAAATCAGATATATATTTT

mRNA sequence

TATACGAGTCATCTCGATCATGGATGAACGTTCTTCGCCTTCAAACTATTTTGAAATTTACTTAAGATACGAGCCTCGAATCTTCAATTAATAGGTCAGAGGTTTGAATCAGGACGAGGCCCCCATTTCCCATTGGCAAGTGGCAGCAAAAGGCGAGCGAGTTAATCTTCATCTCCCCTCTTCCCACTCTCGCGCCTCATTGGTTTCATCGTCCGCCGTCCACCCGCCACCTGCCACCTGCCACCTGCAACGCCTCCTCCTTCCTTCTCCGTTGGGCGGAGTTTCCTAAGCTATACCTTTCTTTTACTTCCGACGAATCAATTTCACTTGCCCTCTCGAATCAGATTCGCTTCTTTCCAGCTAATACCCAATGGCTTCCTCGCTCGCTTCAGCCTCTGCTGCTTCCGCAGTGGCCAAATCTCCTTGCACTGCCATGGCTCGCCGCGATATCAATCACAAGAACTCTCATTGCGCGCTCTCTTTTCGGCTCCCTCACAAGCCCAAACTCCGAATCTTCACCAGGGGTGTGCAGCCTGTTCGTAAGCATCTAACTCCTGTACAGGCACAGTTGAATGAGGATCCTGTTGATGCACCTAATGCTGCAAAAGTTTCATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCCAAACCATTGAGTGATCCATCTTCTAAAGCTTTGGCAACGGAAGAGTCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAACTGGTTGATTCCAGAGATATTGTAGAGCTGCAATTGAAACAGTTCGACTGTGAAGTGATGATCCGGAAAAAGGAGGCCTTACCACAACCGCCGCCTCCTGCTGCCATTCCTATGCCGTATGCACCCCCACCTTCAGTAGCACAGTCAGTTCCTCCCCCTGTGCCTGCTGCACTGCCAGCGCCCGCTTCTCCTGTTTCAAGCCTGCCATCCTCAACTCCTGCTGCTAAGTCGGCCAAGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCAGGCACATTCTACCGTAGTCCAGGACCTGGGGAGCCACCATTTGTTAAGGTTGGAGATAAAGTGCAGAAAGGACAAGTCTTGTGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCCGATCAATCTGGAACCATAGTCGAGGTTATTGCAGAGGACGGGAAGCCTGTCAGCGTCGGTGTGCCTTTGTTTGTCATTCAACCTTAGGCCAATCCGGGTTTCGATTACACGAGACGAGTAAAGGAGATGAGATTAAGCTGAGTTTGGGAAGCAAATTGAGTTTCCGAGCAAGTTCGGGTTGTGGGTTAGTTATTGGTAGTGTCCTTTTTCCCCCTTCTTCCTTCGTTTTCCTCTTCAGTTGAGCGTAGACATGATAGAGATTGTGTTGATAAACATATCAATTCCTTTTCCAGTTTTCGTGTGAACTTTCAACTTTCTTCGTGAAATCAGATATATATTTT

Coding sequence (CDS)

ATGGCTTCCTCGCTCGCTTCAGCCTCTGCTGCTTCCGCAGTGGCCAAATCTCCTTGCACTGCCATGGCTCGCCGCGATATCAATCACAAGAACTCTCATTGCGCGCTCTCTTTTCGGCTCCCTCACAAGCCCAAACTCCGAATCTTCACCAGGGGTGTGCAGCCTGTTCGTAAGCATCTAACTCCTGTACAGGCACAGTTGAATGAGGATCCTGTTGATGCACCTAATGCTGCAAAAGTTTCATCTGAATCTGATGTTTTAGCATCAGATGGAAGTGCCAAACCATTGAGTGATCCATCTTCTAAAGCTTTGGCAACGGAAGAGTCAATCTCTGAGTTCATTACTCAAGTTTCAAGCCTTATCAAACTGGTTGATTCCAGAGATATTGTAGAGCTGCAATTGAAACAGTTCGACTGTGAAGTGATGATCCGGAAAAAGGAGGCCTTACCACAACCGCCGCCTCCTGCTGCCATTCCTATGCCGTATGCACCCCCACCTTCAGTAGCACAGTCAGTTCCTCCCCCTGTGCCTGCTGCACTGCCAGCGCCCGCTTCTCCTGTTTCAAGCCTGCCATCCTCAACTCCTGCTGCTAAGTCGGCCAAGTCCTCCCTTCCACCTCTTAAATGTCCTATGGCAGGCACATTCTACCGTAGTCCAGGACCTGGGGAGCCACCATTTGTTAAGGTTGGAGATAAAGTGCAGAAAGGACAAGTCTTGTGCATCATTGAGGCCATGAAATTAATGAACGAAATAGAAGCCGATCAATCTGGAACCATAGTCGAGGTTATTGCAGAGGACGGGAAGCCTGTCAGCGTCGGTGTGCCTTTGTTTGTCATTCAACCTTAG

Protein sequence

MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHLTPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP

Homology

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BLAST of Cp4.1LG11g10210 vs. ExPASy Swiss-Prot
Match: Q42783 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glycine max OX=3847 GN=ACCB-1 PE=1 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 4.6e-64
Identity = 147/222 (66.22%), Postives = 171/222 (77.03%), Query Frame = 0


Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           T V+AQLNE  +D+ + A           +  AKPL++PSS  LAT+ES+S+FITQV+SL
Sbjct: 43  TRVKAQLNEVALDSSSNATSPPMKAKSKEEPPAKPLAEPSSSVLATQESVSQFITQVASL 102

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           +KLVDSRDIVEL+LKQ D EV IRKKEA+PQPPP     + Y+PPP      PPPVPA+ 
Sbjct: 103 VKLVDSRDIVELKLKQHDVEVTIRKKEAMPQPPPAPQPSVVYSPPPPALP--PPPVPAST 162

Query: 181 PAPA-SPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVL 240
           PAP  +  +  P+S PA KSAKSSLPPLK PMAGTFYRSP PGEP FVKVGDKV+KGQV+
Sbjct: 163 PAPTLARATPTPTSAPAVKSAKSSLPPLKSPMAGTFYRSPAPGEPSFVKVGDKVKKGQVV 222

Query: 241 CIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           CIIEAMKLMNEIEADQSGTIVE++AED K VSV  PLFVIQP
Sbjct: 223 CIIEAMKLMNEIEADQSGTIVEIVAEDAKSVSVDTPLFVIQP 262

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy Swiss-Prot
Match: Q42533 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP1 PE=1 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 1.9e-62
Identity = 160/285 (56.14%), Postives = 193/285 (67.72%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS  S ++ +A A              +N    +SFRL  KPKLR  ++   P R   
Sbjct: 1   MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSY 60

Query: 61  TPVQAQLNEDPVDA-PNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSS 120
             V+AQ N+    A  NAAKV   S     + ++   S  SS  LATEESISEF+TQV++
Sbjct: 61  PVVKAQSNKVSTGASSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTT 120

Query: 121 LIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAP-PPSVAQSVPPPV-- 180
           L+KLVDSRDIVELQLKQ DCE++IRKKEALPQP  PA+  M   P  PS AQ + PP   
Sbjct: 121 LVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPAAP 180

Query: 181 PAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKG 240
            AA PAP++P S  P S P    AKSSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKG
Sbjct: 181 AAAAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKG 240

Query: 241 QVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           QVLCI+EAMKLMNEIE+D +GT+V+++AEDGKPVS+  PLFV+QP
Sbjct: 241 QVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy Swiss-Prot
Match: Q9LLC1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BCCP2 PE=1 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.4e-49
Identity = 115/173 (66.47%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 110 ISEFITQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVA 169
           +SEF+ +VS L+KLVDS+DIVEL+LKQ DCE++IRKKEAL Q  PPA  P+ ++ PP +A
Sbjct: 86  LSEFMAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPA--PVYHSMPPVMA 145

Query: 170 Q-SVPPPVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVK 229
             S+PP  P ALP   +P S+ P++     +  SS PPLK PMAGTFYRSPGPGEPPFVK
Sbjct: 146 DFSMPPAQPVALPPSPTPTST-PATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVK 205

Query: 230 VGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           VGDKVQKGQ++CIIEAMKLMNEIEA++SGTI+E++AEDGKPVSV  PLFVI P
Sbjct: 206 VGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy Swiss-Prot
Match: Q06881 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=accB PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 5.9e-19
Identity = 68/179 (37.99%), Postives = 98/179 (54.75%), Query Frame = 0


Query: 116 QVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQS-VPP 175
           ++  L+  +   DI E+ LK  D E+ +RK   +      + +P+  AP   V  S +P 
Sbjct: 7   EIRQLLTTIAQTDIAEVTLKSDDFELTVRKAVGVNN----SVVPVVTAPLSGVVGSGLPS 66

Query: 176 PVPAALPAPASP------------VSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPG 235
            +P    A  SP              +   S P AK     L  +  PM GTFYR+P PG
Sbjct: 67  AIPIVAHAAPSPSPEPGTSRAADHAVTSSGSQPGAKIIDQKLAEVASPMVGTFYRAPAPG 126

Query: 236 EPPFVKVGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           E  FV+VGD++++GQ +CIIEAMKLMNEIEAD SG ++E++ ++G+PV    PL  I+P
Sbjct: 127 EAVFVEVGDRIRQGQTVCIIEAMKLMNEIEADVSGQVIEILVQNGEPVEYNQPLMRIKP 181

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy Swiss-Prot
Match: P37799 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=accB PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 65/166 (39.16%), Postives = 94/166 (56.63%), Query Frame = 0


Query: 114 ITQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVP 173
           I +V  LI+L++   I EL++++ +  V I +       P        YA  P+ A  V 
Sbjct: 3   IRKVKKLIELLEESGIDELEIREGEESVRISRHSKTAAQP-------VYAQAPAFAAPVA 62

Query: 174 PPVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKV 233
            P PAA    A+P ++   S PAA     ++  ++ PM GTFYR+  P    FV+VG  V
Sbjct: 63  APAPAA----AAPAAAAAESAPAAPKLNGNV--VRSPMVGTFYRAASPTSANFVEVGQSV 122

Query: 234 QKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVI 280
           +KG +LCI+EAMK+MN IEA+ SGTI  ++ E+G+PV    PLF I
Sbjct: 123 KKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTI 155

[Close]

BLAST of Cp4.1LG11g10210 vs. NCBI nr
Match: XP_023547170.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 509 bits (1311), Expect = 4.68e-181
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL
Sbjct: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL
Sbjct: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180

Query: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240
           PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC
Sbjct: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240

Query: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP
Sbjct: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281

[Close]

BLAST of Cp4.1LG11g10210 vs. NCBI nr
Match: XP_023547168.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 503 bits (1294), Expect = 2.27e-178
Identity = 281/287 (97.91%), Postives = 281/287 (97.91%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNE------DPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI 120
           TPVQAQLNE      DPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI
Sbjct: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180
           TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP
Sbjct: 121 TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180

Query: 181 PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240
           PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ
Sbjct: 181 PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240

Query: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP
Sbjct: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 287

[Close]

BLAST of Cp4.1LG11g10210 vs. NCBI nr
Match: XP_023547171.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498 bits (1281), Expect = 1.57e-176
Identity = 278/281 (98.93%), Postives = 278/281 (98.93%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTR   PVRKHL
Sbjct: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTR---PVRKHL 60

Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL
Sbjct: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL
Sbjct: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180

Query: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240
           PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC
Sbjct: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240

Query: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP
Sbjct: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 278

[Close]

BLAST of Cp4.1LG11g10210 vs. NCBI nr
Match: XP_022946680.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 494 bits (1273), Expect = 2.89e-175
Identity = 273/281 (97.15%), Postives = 276/281 (98.22%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAAS VAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASVVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSD SSK LATE+SISEFITQVSSL
Sbjct: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEKSISEFITQVSSL 120

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           IKLVDSRDIVELQLKQ DCEV+IRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL
Sbjct: 121 IKLVDSRDIVELQLKQLDCEVIIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180

Query: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240
           PAPASPVSSLPSS PAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC
Sbjct: 181 PAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240

Query: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           IIEAMKLMNEIEADQSGTIVEV+AEDGKPVSVGVPLFVIQP
Sbjct: 241 IIEAMKLMNEIEADQSGTIVEVLAEDGKPVSVGVPLFVIQP 281

[Close]

BLAST of Cp4.1LG11g10210 vs. NCBI nr
Match: XP_023547169.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491 bits (1264), Expect = 7.59e-174
Identity = 278/287 (96.86%), Postives = 278/287 (96.86%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTR   PVRKHL
Sbjct: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTR---PVRKHL 60

Query: 61  TPVQAQLNE------DPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI 120
           TPVQAQLNE      DPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI
Sbjct: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180
           TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP
Sbjct: 121 TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180

Query: 181 PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240
           PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ
Sbjct: 181 PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240

Query: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP
Sbjct: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 284

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy TrEMBL
Match: A0A6J1G4L2 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata OX=3662 GN=LOC111450672 PE=4 SV=1)

HSP 1 Score: 494 bits (1273), Expect = 1.40e-175
Identity = 273/281 (97.15%), Postives = 276/281 (98.22%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAAS VAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASVVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSD SSK LATE+SISEFITQVSSL
Sbjct: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEKSISEFITQVSSL 120

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           IKLVDSRDIVELQLKQ DCEV+IRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL
Sbjct: 121 IKLVDSRDIVELQLKQLDCEVIIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180

Query: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240
           PAPASPVSSLPSS PAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC
Sbjct: 181 PAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240

Query: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           IIEAMKLMNEIEADQSGTIVEV+AEDGKPVSVGVPLFVIQP
Sbjct: 241 IIEAMKLMNEIEADQSGTIVEVLAEDGKPVSVGVPLFVIQP 281

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy TrEMBL
Match: A0A6J1G4I9 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata OX=3662 GN=LOC111450672 PE=4 SV=1)

HSP 1 Score: 488 bits (1256), Expect = 6.78e-173
Identity = 273/287 (95.12%), Postives = 276/287 (96.17%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAAS VAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASVVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNE------DPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI 120
           TPVQAQLNE      DPVDAPNAAKVSSESDVLASDGSAKPLSD SSK LATE+SISEFI
Sbjct: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEKSISEFI 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180
           TQVSSLIKLVDSRDIVELQLKQ DCEV+IRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP
Sbjct: 121 TQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180

Query: 181 PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240
           PVPAALPAPASPVSSLPSS PAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ
Sbjct: 181 PVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240

Query: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           KGQVLCIIEAMKLMNEIEADQSGTIVEV+AEDGKPVSVGVPLFVIQP
Sbjct: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSVGVPLFVIQP 287

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy TrEMBL
Match: A0A6J1KIM5 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX=3661 GN=LOC111493574 PE=4 SV=1)

HSP 1 Score: 482 bits (1240), Expect = 1.44e-170
Identity = 270/281 (96.09%), Postives = 274/281 (97.51%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAASAVAKSPCTA+ARR+INHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASAVAKSPCTAIARRNINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSD SSK LATEESISEFITQVSSL
Sbjct: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFITQVSSL 120

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           IKLVDSRDIVELQLKQ DCEV+IRKKEAL  P PPAAIPMPYAPPPSVAQSVPPPVPAAL
Sbjct: 121 IKLVDSRDIVELQLKQLDCEVIIRKKEAL-LPQPPAAIPMPYAPPPSVAQSVPPPVPAAL 180

Query: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240
           PAPASPVSSLPSS PAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC
Sbjct: 181 PAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240

Query: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           IIEAMKLMNEIEADQSGTIVEV+AEDGKPVSVGVPLFVIQP
Sbjct: 241 IIEAMKLMNEIEADQSGTIVEVLAEDGKPVSVGVPLFVIQP 280

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy TrEMBL
Match: A0A6J1KC47 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX=3661 GN=LOC111493574 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 6.97e-168
Identity = 270/287 (94.08%), Postives = 274/287 (95.47%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASSLASASAASAVAKSPCTA+ARR+INHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL
Sbjct: 1   MASSLASASAASAVAKSPCTAIARRNINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60

Query: 61  TPVQAQLNE------DPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFI 120
           TPVQAQLNE      DPVDAPNAAKVSSESDVLASDGSAKPLSD SSK LATEESISEFI
Sbjct: 61  TPVQAQLNESSISLKDPVDAPNAAKVSSESDVLASDGSAKPLSDQSSKVLATEESISEFI 120

Query: 121 TQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPP 180
           TQVSSLIKLVDSRDIVELQLKQ DCEV+IRKKEAL  P PPAAIPMPYAPPPSVAQSVPP
Sbjct: 121 TQVSSLIKLVDSRDIVELQLKQLDCEVIIRKKEAL-LPQPPAAIPMPYAPPPSVAQSVPP 180

Query: 181 PVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240
           PVPAALPAPASPVSSLPSS PAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ
Sbjct: 181 PVPAALPAPASPVSSLPSSPPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQ 240

Query: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           KGQVLCIIEAMKLMNEIEADQSGTIVEV+AEDGKPVSVGVPLFVIQP
Sbjct: 241 KGQVLCIIEAMKLMNEIEADQSGTIVEVLAEDGKPVSVGVPLFVIQP 286

[Close]

BLAST of Cp4.1LG11g10210 vs. ExPASy TrEMBL
Match: A0A5D3BDP1 (Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001070 PE=4 SV=1)

HSP 1 Score: 414 bits (1064), Expect = 9.15e-144
Identity = 236/281 (83.99%), Postives = 249/281 (88.61%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS+ASASAASAVAK P T +  R  N+  SH +LSFRLP+KPKLRIFTRGVQPVRKH 
Sbjct: 1   MASSVASASAASAVAKPPSTTLPPRTFNYNTSHSSLSFRLPNKPKLRIFTRGVQPVRKHS 60

Query: 61  TPVQAQLNEDPVDAPNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSSL 120
           T +QAQLNEDPVD P  AK++SESDVLASDGSAKP SD SSK LATEESISEFITQVSSL
Sbjct: 61  TFIQAQLNEDPVDVPTVAKITSESDVLASDGSAKPSSDQSSKILATEESISEFITQVSSL 120

Query: 121 IKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVPPPVPAAL 180
           +KLVDSRDIVELQLKQ DCEV+IRKKEALPQPPPPA  PM YAPPPSVAQS PPP+PAAL
Sbjct: 121 VKLVDSRDIVELQLKQLDCEVVIRKKEALPQPPPPAVGPMMYAPPPSVAQSAPPPMPAAL 180

Query: 181 PAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240
           PAPAS  SS PSS P AKSA SSLP LKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC
Sbjct: 181 PAPAS-ASSAPSSPPPAKSATSSLPTLKCPMAGTFYRSPGPGEPPFVKVGDKVQKGQVLC 240

Query: 241 IIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 281
           IIEAMKLMNEIEAD+SGTIVEV+AEDGKPVSV  PLFVIQP
Sbjct: 241 IIEAMKLMNEIEADRSGTIVEVLAEDGKPVSVDTPLFVIQP 280

[Close]

BLAST of Cp4.1LG11g10210 vs. TAIR 10
Match: AT5G16390.1 (chloroplastic acetylcoenzyme A carboxylase 1 )

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-63
Identity = 160/285 (56.14%), Postives = 193/285 (67.72%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS  S ++ +A A              +N    +SFRL  KPKLR  ++   P R   
Sbjct: 1   MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSY 60

Query: 61  TPVQAQLNEDPVDA-PNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSS 120
             V+AQ N+    A  NAAKV   S     + ++   S  SS  LATEESISEF+TQV++
Sbjct: 61  PVVKAQSNKVSTGASSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTT 120

Query: 121 LIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAP-PPSVAQSVPPPV-- 180
           L+KLVDSRDIVELQLKQ DCE++IRKKEALPQP  PA+  M   P  PS AQ + PP   
Sbjct: 121 LVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPAAP 180

Query: 181 PAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKG 240
            AA PAP++P S  P S P    AKSSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKG
Sbjct: 181 AAAAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKG 240

Query: 241 QVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           QVLCI+EAMKLMNEIE+D +GT+V+++AEDGKPVS+  PLFV+QP
Sbjct: 241 QVLCIVEAMKLMNEIESDHTGTVVDIVAEDGKPVSLDTPLFVVQP 280

[Close]

BLAST of Cp4.1LG11g10210 vs. TAIR 10
Match: AT5G16390.2 (chloroplastic acetylcoenzyme A carboxylase 1 )

HSP 1 Score: 199.1 bits (505), Expect = 4.6e-51
Identity = 142/256 (55.47%), Postives = 167/256 (65.23%), Query Frame = 0


Query: 1   MASSLASASAASAVAKSPCTAMARRDINHKNSHCALSFRLPHKPKLRIFTRGVQPVRKHL 60
           MASS  S ++ +A A              +N    +SFRL  KPKLR  ++   P R   
Sbjct: 1   MASSSFSVTSPAAAASVYAVTQTSSHFPIQNRSRRVSFRLSAKPKLRFLSK---PSRSSY 60

Query: 61  TPVQAQLNEDPVDA-PNAAKVSSESDVLASDGSAKPLSDPSSKALATEESISEFITQVSS 120
             V+AQ N+    A  NAAKV   S     + ++   S  SS  LATEESISEF+TQV++
Sbjct: 61  PVVKAQSNKVSTGASSNAAKVDGPSSAEGKEKNSLKESSASSPELATEESISEFLTQVTT 120

Query: 121 LIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAP-PPSVAQSVPPPV-- 180
           L+KLVDSRDIVELQLKQ DCE++IRKKEALPQP  PA+  M   P  PS AQ + PP   
Sbjct: 121 LVKLVDSRDIVELQLKQLDCELVIRKKEALPQPQAPASYVMMQQPNQPSYAQQMAPPAAP 180

Query: 181 PAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVKVGDKVQKG 240
            AA PAP++P S  P S P    AKSSLP +K PMAGTFYRSP PGEPPF+KVGDKVQKG
Sbjct: 181 AAAAPAPSTPASLPPPSPPT--PAKSSLPTVKSPMAGTFYRSPAPGEPPFIKVGDKVQKG 240

Query: 241 QVLCIIEAMKLMNEIE 253
           QVLCI+EAMKLMNEIE
Sbjct: 241 QVLCIVEAMKLMNEIE 251

[Close]

BLAST of Cp4.1LG11g10210 vs. TAIR 10
Match: AT5G15530.1 (biotin carboxyl carrier protein 2 )

HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50
Identity = 115/173 (66.47%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 110 ISEFITQVSSLIKLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVA 169
           +SEF+ +VS L+KLVDS+DIVEL+LKQ DCE++IRKKEAL Q  PPA  P+ ++ PP +A
Sbjct: 86  LSEFMAKVSGLLKLVDSKDIVELELKQLDCEIVIRKKEALQQAVPPA--PVYHSMPPVMA 145

Query: 170 Q-SVPPPVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRSPGPGEPPFVK 229
             S+PP  P ALP   +P S+ P++     +  SS PPLK PMAGTFYRSPGPGEPPFVK
Sbjct: 146 DFSMPPAQPVALPPSPTPTST-PATAKPTSAPSSSHPPLKSPMAGTFYRSPGPGEPPFVK 205

Query: 230 VGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           VGDKVQKGQ++CIIEAMKLMNEIEA++SGTI+E++AEDGKPVSV  PLFVI P
Sbjct: 206 VGDKVQKGQIVCIIEAMKLMNEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255

[Close]

BLAST of Cp4.1LG11g10210 vs. TAIR 10
Match: AT3G15690.2 (Single hybrid motif superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.8e-05
Identity = 53/174 (30.46%), Postives = 85/174 (48.85%), Query Frame = 0


Query: 115 TQVSSLI-KLVDSRDIVELQLKQFDCEVMIRKK---EALPQPPPPAAIPMPYAPPPSVAQ 174
           ++V +L+ ++ DS  I E +LK     + + +     +  QPPP  A+          A 
Sbjct: 92  SEVEALVTEICDSSSIAEFELKLGGFRLYVARNIADNSSLQPPPTPAV---------TAS 151

Query: 175 SVPPPVPAALPAPASPVSSLPSSTPAAKSAKSSLPPLKCPMAGTFYRS---PGPGEPPFV 234
           +     P +  + +S  +SL  S PA+ +A   L  L+ P  G F RS    G   P   
Sbjct: 152 NATTESPESNGSASS--TSLAISKPASSAADQGLMILQSPKVGFFRRSKTIKGKRLPSSC 211

Query: 235 KVGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
           K  D+V++GQ+LC IE +     IE+D +G +V+++ EDG+PV     L  I P
Sbjct: 212 KEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKILREDGEPVGYNDALISILP 254

[Close]

BLAST of Cp4.1LG11g10210 vs. TAIR 10
Match: AT1G52670.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 8.5e-05
Identity = 56/179 (31.28%), Postives = 84/179 (46.93%), Query Frame = 0


Query: 115 TQVSSLI-KLVDSRDIVELQLKQFDCEVMIRKKEALPQPPPPAAIPMPYAPPPSVAQSVP 174
           ++V +LI ++ DS  I E +LK     + + +K      PPP  I      P   A + P
Sbjct: 92  SEVEALISEITDSSSIAEFELKLGGFRLYVARKLTDESSPPPQQI-----QPVVAASATP 151

Query: 175 PPVPAALPAPASPVSSLPSSTPAA--------KSAKSSLPPLKCPMAGTFYRS---PGPG 234
             V     A +S ++   +S+ +A        K+A   L  L+ P  G F RS    G  
Sbjct: 152 EGVHTNGSATSSSLAITKTSSSSADRPQTLANKAADQGLVILQSPTVGYFRRSKTIKGKR 211

Query: 235 EPPFVKVGDKVQKGQVLCIIEAMKLMNEIEADQSGTIVEVIAEDGKPVSVGVPLFVIQP 282
            P   K  D V++GQVLC IE +     +E+D SG IV+++ EDG+PV     L  + P
Sbjct: 212 TPTICKEKDIVKEGQVLCYIEQLGGQIPVESDVSGEIVKILREDGEPVGYNDALITVLP 265

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g10210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q42783	4.6e-64	66.22	Biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic OS=Glyc...	[more]
Q42533	1.9e-62	56.14	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic OS=Ar...	[more]
Q9LLC1	1.4e-49	66.47	Biotin carboxyl carrier protein of acetyl-CoA carboxylase 2, chloroplastic OS=Ar...	[more]
Q06881	5.9e-19	37.99	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Nostoc sp. (strain ...	[more]
P37799	1.5e-17	39.16	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Pseudomonas aerugin...	[more]

BLAST of Cp4.1LG11g10210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547170.1	4.68e-181	100.00	biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like is...	[more]
XP_023547168.1	2.27e-178	97.91	biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like is...	[more]
XP_023547171.1	1.57e-176	98.93	biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like is...	[more]
XP_022946680.1	2.89e-175	97.15	biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like is...	[more]
XP_023547169.1	7.59e-174	96.86	biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic-like is...	[more]

BLAST of Cp4.1LG11g10210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4L2	1.40e-175	97.15	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata ...	[more]
A0A6J1G4I9	6.78e-173	95.12	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita moschata ...	[more]
A0A6J1KIM5	1.44e-170	96.09	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX...	[more]
A0A6J1KC47	6.97e-168	94.08	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucurbita maxima OX...	[more]
A0A5D3BDP1	9.15e-144	83.99	Biotin carboxyl carrier protein of acetyl-CoA carboxylase OS=Cucumis melo var. m...	[more]

BLAST of Cp4.1LG11g10210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16390.1	1.4e-63	56.14	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT5G16390.2	4.6e-51	55.47	chloroplastic acetylcoenzyme A carboxylase 1	[more]
AT5G15530.1	1.0e-50	66.47	biotin carboxyl carrier protein 2	[more]
AT3G15690.2	3.8e-05	30.46	Single hybrid motif superfamily protein	[more]
AT1G52670.1	8.5e-05	31.28	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001249	Acetyl-CoA biotin carboxyl carrier	PRINTS	PR01071	ACOABIOTINCC	coord: 226..240 score: 65.19 coord: 209..222 score: 69.44 coord: 241..254 score: 81.75
IPR001249	Acetyl-CoA biotin carboxyl carrier	TIGRFAM	TIGR00531	TIGR00531	coord: 114..280 e-value: 1.3E-41 score: 140.6
IPR000089	Biotin/lipoyl attachment	PFAM	PF00364	Biotin_lipoyl	coord: 207..279 e-value: 1.4E-24 score: 85.7
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 199..280 score: 25.301914
None	No IPR available	GENE3D	2.40.50.100		coord: 205..280 e-value: 3.1E-33 score: 115.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..205
None	No IPR available	PANTHER	PTHR43416	DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED	coord: 1..280
None	No IPR available	PANTHER	PTHR43416:SF21	BIOTIN CARBOXYL CARRIER PROTEIN OF ACETYL-COA CARBOXYLASE, CHLOROPLASTIC	coord: 1..280
None	No IPR available	CDD	cd06850	biotinyl_domain	coord: 207..279 e-value: 1.64911E-25 score: 94.0199
IPR001882	Biotin-binding site	PROSITE	PS00188	BIOTIN	coord: 236..253
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 206..279

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g10210.1	Cp4.1LG11g10210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003989	acetyl-CoA carboxylase activity