Cp4.1LG11g10190 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g10190
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Reticulon-like protein
Location	Cp4.1LG11: 8564838 .. 8569613 (+)
RNA-Seq Expression	Cp4.1LG11g10190
Synteny	Cp4.1LG11g10190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAGACTAAAACACAAATCTTTGGATTGGTATACGTTTGATTGTGAAAATGTTCGATAGGAATAATAATTAACCCTTCAAATTTCTTTTTCCATCTTCACTTTCCCTTTCAGATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTTTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCTGTTTTGCTGCCACCGCTGCTTTTAAACCTTTAGATTTCTTCGCCGGGGGGTTTTTCTTTTTGGGTTTAGGTAGGCTGTGGCGGCGGAGCGGTAGCGATGGATTTGACCCGGCTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCNTCTTTTAAACCTTTAGATTTCTTCGCCGGGGGGTTTTTCCTTTTGGGTTTAGGTAGGCTGCGGCGGCGGAGCGGCAGCGATGGATTTGACCCGGTTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCTGTGTGGGAGAGCAGAATCAGATTGGATGAAGTCAGAGGTGGGGTTAAGGTGTTTAACGGCGACGACGGAAATGCCGAATGTGGGCTTCCGGCTGCTTCCGCTTCTCCCGTCAGCGGCGGCAGCGGAAGAAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCTCATCGCCGAGGAGAAACCAGAGTCGTCGAGCAGCGGCGACGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCTAACGGCAGCCCAATCAAACCCGGCGAGAAAACAGAGAGAAACCCGACGAGGAAGAAGAGCGAGCAATCTCGTAAATCTGCCGTCGGGTTAACCAAACCGTCGACGAACGCAACCGGAAAAACCCCGCCGGAGAAAAATGAATGCAGAGAGAAAGCGATTTCATCTACTCCATCTCAAGATTTCTTCGATGCCTTCGATGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCGCAGCAGAAACTTTCCCGAGAAACAAACAGAATCTACAGAGATTAAGTGAGAAAATCCCAAATCCCGATTTTCATTTTCATTTTCATTTTCATTTCCCCTAATTAATTTTCTTGAAATCTTTGGTGTTCTTCAGTGGATTTGATAATGTGGAGAGACATTTCAAGATCCGCTCTGGTTTTCGGAGTGGGAAATCTAGTTATAATCCTCTGTTATTTCATGAAGAACATGAATATCAGGTAAAAGAAAATTCCAAATCCGCCATTGTTGAGGGAAAGAAGAAACTGGGTGATTCAGTAAATTCTTCATTTAATGTTTTTGCAGCTTTATCAGCGTTATTTCGCACATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTGGAAGGTGCTCAAATGGGTTCTTCTTTTCTTCACTGATTTTTCATTTGATTTTCTGACTGATTTTCCCGGGAAAATTACAGGAGAAAAGGAATCGATTCAGACGATGAACATTATGCAATTGAAGAAGAAGAAGTGATTCGATTTGCTAAACGACTCGTTCCTTTCGTGAATCAATTGCTGCTAAATCTCAAAGCTCTGTTCATGGGAGATCCTTCTGCAACCATGAAGGTAATTTTTTTTTTTTTTTTTTTTTTTTATAATAAATTTCCAAATTCCATTATATATAATAATTATATTAAAAAAAAAATAGCATTTAAAAACTTATGGCCAGATTTAATATTTAATAATTTAGAAAAAAACAAAATGAACATCAAAACTTGAAGGCCATTTAATTAAAAAATTGATAGTGTCGGTTTGATTTTTTTTTATATTTACATATATTCTCAATTTAAAAAATTATATTCTTATTATTAATAATTAAATATCAGACATTTATAAATTACAATGCAGCGTCGTTAAATATTTTTAAATTTTTAAAAAATTTAATTTAACCGAACATTTATGATTTAGATTGGGTAATATGGGTTGATCGAGATTTTACATTTACTAAGGTAAATGATTTTGGTAAAAAGAATATTATATTAAATAATATTTGTTTGGTATTTTGCAGCTGGGTGTAACGCTGTTTGTGTTGGCAAGGTGGGGTAGCTTCATTACCCTTTGGAATGTCGTCAAATGTGGTAATTTTTTTAAAAATTAATTTAAATTATTTTCAATTTTAAAATTTGACTTAGTTTTTAAAATAATTTTAAAATGTGGTTTATTTATTTATTTATTTATTATTGGATTCTGACAGGATTCATTGGGGTTTTCACACTGCCCAAGTTAATTACCCACGGTAAAATATATCTTCACCGACTTTTTACTTTTTACTTTTTACCGTTCTTTTTGTCGATAAGTCTTGTCGGTGTTGGAATTGGATACGGCCGAGTACAACAAAAACACCGTACACTCTGTGTTTTGGCGCGTCGATTTGTTTGACTCTGAAACTGGTCTCACTCTGACACTATCCTGACCCTCTATTGTCCCTTCACATCACAACTAAAACCCATAATTTCCTTTTTTTTTTTTTGTCGTCATGTGGGGTCCACAGCTTTCTTCNTCACTCTGACACTATCCTGACCCTCTATTGTCCCTTCACATCACAACTAAAACCCATAATTTCTTTTTTTTTTTTTGTCGTCATGTGGGGTCCACAGCTTTCTTCACGAGACGTTTTCAGAGAAATTATTTTATTTTTATTTTTGAAAATTTTGGGAAAAAATAATAAAATGAAATTATTTGTTTTTCTTTGTCGGTGAATTCGTTTCTTCGTTGGGTTTTCGTGTCGGCTGTGTCGGATGGCGTGATGTTTGATCGAATCATCTCAACCGTTCGTTTCAAGATCCCTTTTTTTTTTTTGTCCCCTAAATTCTAAAATTAATCACCATTTTTTATTTTTATTTTTATAAATTTTTATTTTTTAATTTAATTTCGTGTCTATATATTATGTCTAGTAATAATTCTTTGAAATGTTTAGAATTTTTAGTAAATTTATGAAATTTAATTTTACTTTTAGTGAAATCAATTAAATACAAATTTAATAAATTAATGACTATGTGGTTCATGTTTCGATTTATTCTTAATAACGTTGAATGGTATTGTTGAGAATATTTAGCTTTTAATTACGGTTTACCATATATATCATATTTGACCGTTGATGATAGGCTAATATCTTATAACGTTGAGGATATTTATGCATCATATTTGACTCTTGATTATAGGCTAGTATCGTGTTACTCTTTCTATTTTCTTTGTGATCTATTTGATTCTGTAAACGATTATAGATAGAGAACTTTCACTACTATTTGGTGTCGGGANATTACTCTTTCCATTTTCTTTGTGATCTATTTGATTCTGTAGACGATTATAGATAGAGAACTTTCACTACTATTTGGTGTCGGGATTTTAGCAAATATTTTCATAGTATTAGAGCCCTTCCAGTTTAGCAACCCCGACCCTTTTTTCTCCATGACTTTCAAATGCTTTCTCATCTTCTTCCTTTCAATACTCTAATCCATATGACTCGAGATATCAGCCGAACTTATGTGAGTCATATACGAATTCGAATCTCTAAGGGTTGACCTGTCTCTACCTTAGGGATCCTATGTAGCTGCCTCACCACCATGTGACCTCTCTCACTCTTTGAGAGAGTTGTTTGTCCTTCTAACCTAGGGACTACCCTTTGCCATTCATATTGAGTTTGTGTACCTCTTCATTATTAAAGCCTAGTTTGTACAATCATGAAATAATACACTTTAGCCAACGAAAGGGGCTTTGCGACAATAATACCGTCGGTAATTACGAAAGATGTCACCCAACCCTAAAGAATAACATAAAACCTAACAAGAGATCCAACTGTAACAGCCCAAGTCCACCGCCAGTAGATACTGTTCTCTTTGGGGCGCTTTTCCTTTCGGGATTCATAGAGGGTCTAGCCCTACTATTACCAGTGACTGGCTTTGATACTATCTGTAACAGCTCAAACCCACTGCTAGCGGATACTATCCTCTTTGGGCTTTCTCTTTCGGGCTTCCCCTCAAGATATTTAAACGCGTAAAAGTTTTTGCGCTCTTGTAATGAATGTTTCGTTCCTTTCTCGAACTGATGTGGAATCTCACAATTCACCCGTTATGACGTTCTCTTTTGATTTTTGTTGATGCGTTTTAAGAGTTGTAATGATGTTATGGCGTTCTCTTTTGTAAATTTAGGTGAACAGTGGTTGACACTTTGTGGGAGTTCTTGGAAGTTATGTTCTCACAAGAAGGCAGTGGCTGTTGCCCTCTTCTTCATAGTCTGGAGTTTTTCTTCGACTCTATATCGTGTTTGGGCAGGTAACCGTTTCGAACTGAAAACTCGATCATATGAATTTCAAAGCATGGTTTGAACATGGAACAGCATTGTGTAACATGTTTTATATGACGTTGTATGTACGATGTTTGCAGTGTTCTTCGTGTTCGTGAGCTTTCGGTACTACGCGGGAGGTTAAAAATGTAGAAGTAGCTCCAAAAAACGACACGGTTTCGGTAAGTTCGAAGCTCAAGAGACAATATTGAACAATTTTGAGGCTGTTTTTCTCTGTTTTTTTTGAGCTAGCTAGCCAAAATTACCATGTAAATTCATGCACTATGGTAGAAATCCATCCATCTTGTGTTTTATCAATACATATTATTTTGAAAATGTCTAAACCTTCTCGACTTGCTCGGATATTAGGCATTTTGAACTA

mRNA sequence

TGTAGACTAAAACACAAATCTTTGGATTGGTATACGTTTGATTGTGAAAATGTTCGATAGGAATAATAATTAACCCTTCAAATTTCTTTTTCCATCTTCACTTTCCCTTTCAGATTCCCGAGAAAAAGAAAAGGAAAATTCACATCACTCCCACCTCCTCCGCCACTTGCCGCTTTCCATTTGGCTCTGTTCTGTTCTGTTCTGTTCACCGCCACAGAGATTCTCTCTGTTCTTCTTCTCTCCGCCTGTTTTGCTGCCACCGCTGCTTTTAAACCTTTAGATTTCTTCGCCGGGGGGTTTTTCTTTTTGGGTTTAGGTAGGCTGTGGCGGCGGAGCGGTAGCGATGGATTTGACCCGGCTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCNTCTTTTAAACCTTTAGATTTCTTCGCCGGGGGGTTTTTCCTTTTGGGTTTAGGTAGGCTGCGGCGGCGGAGCGGCAGCGATGGATTTGACCCGGTTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCTGTGTGGGAGAGCAGAATCAGATTGGATGAAGTCAGAGGTGGGGTTAAGGTGTTTAACGGCGACGACGGAAATGCCGAATGTGGGCTTCCGGCTGCTTCCGCTTCTCCCGTCAGCGGCGGCAGCGGAAGAAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCTCATCGCCGAGGAGAAACCAGAGTCGTCGAGCAGCGGCGACGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCTAACGGCAGCCCAATCAAACCCGGCGAGAAAACAGAGAGAAACCCGACGAGGAAGAAGAGCGAGCAATCTCGTAAATCTGCCGTCGGGTTAACCAAACCGTCGACGAACGCAACCGGAAAAACCCCGCCGGAGAAAAATGAATGCAGAGAGAAAGCGATTTCATCTACTCCATCTCAAGATTTCTTCGATGCCTTCGATGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCGCAGCAGAAACTTTCCCGAGAAACAAACAGAATCTACAGAGATTAATGGATTTGATAATGTGGAGAGACATTTCAAGATCCGCTCTGGTTTTCGGAGTGGGAAATCTAGTTATAATCCTCTGTTATTTCATGAAGAACATGAATATCAGCTTTATCAGCGTTATTTCGCACATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTGGAAGGAGAAAAGGAATCGATTCAGACGATGAACATTATGCAATTGAAGAAGAAGAAGTGATTCGATTTGCTAAACGACTCGTTCCTTTCGTGAATCAATTGCTGCTAAATCTCAAAGCTCTGTTCATGGGAGATCCTTCTGCAACCATGAAGCTGGGTGTAACGCTGTTTGTGTTGGCAAGGTGGGGTAGCTTCATTACCCTTTGGAATGTCGTCAAATGTGGTGAACAGTGGTTGACACTTTGTGGGAGTTCTTGGAAGTTATGTTCTCACAAGAAGGCAGTGGCTGTTGCCCTCTTCTTCATAGTCTGGAGTTTTTCTTCGACTCTATATCGTGTTTGGGCAGTGTTCTTCGTGTTCGTGAGCTTTCGGTACTACGCGGGAGGTTAAAAATGTAGAAGTAGCTCCAAAAAACGACACGGTTTCGGTAAGTTCGAAGCTCAAGAGACAATATTGAACAATTTTGAGGCTGTTTTTCTCTGTTTTTTTTGAGCTAGCTAGCCAAAATTACCATGTAAATTCATGCACTATGGTAGAAATCCATCCATCTTGTGTTTTATCAATACATATTATTTTGAAAATGTCTAAACCTTCTCGACTTGCTCGGATATTAGGCATTTTGAACTA

Coding sequence (CDS)

ATGGATTTGACCCGGTTGAGGGCGGCAGCGGCGGCGAGGGGGAACGTGGTGGCGGGGTCTGTGTGGGAGAGCAGAATCAGATTGGATGAAGTCAGAGGTGGGGTTAAGGTGTTTAACGGCGACGACGGAAATGCCGAATGTGGGCTTCCGGCTGCTTCCGCTTCTCCCGTCAGCGGCGGCAGCGGAAGAAGGAAGACGTGGAAATCCGATGAGGGTTTTAACTCGATTCTCATCGCCGAGGAGAAACCAGAGTCGTCGAGCAGCGGCGACGAACAGAGTCGGAAAAGCCCGATTCCGGCGCGGAGATTGAGATCTAACGGCAGCCCAATCAAACCCGGCGAGAAAACAGAGAGAAACCCGACGAGGAAGAAGAGCGAGCAATCTCGTAAATCTGCCGTCGGGTTAACCAAACCGTCGACGAACGCAACCGGAAAAACCCCGCCGGAGAAAAATGAATGCAGAGAGAAAGCGATTTCATCTACTCCATCTCAAGATTTCTTCGATGCCTTCGATGAAGAGATTGAGAAAGAAAGCTTCGACGTTAAGGAAATCAATTTACCAGAACGGAAGAAAATCGCAGCAGAAACTTTCCCGAGAAACAAACAGAATCTACAGAGATTAATGGATTTGATAATGTGGAGAGACATTTCAAGATCCGCTCTGGTTTTCGGAGTGGGAAATCTAGTTATAATCCTCTGTTATTTCATGAAGAACATGAATATCAGCTTTATCAGCGTTATTTCGCACATGGGTCTTCTTTATCTGGCTGCCATTTTCGTCCATAGCTCCATTTTTGGAAGGAGAAAAGGAATCGATTCAGACGATGAACATTATGCAATTGAAGAAGAAGAAGTGATTCGATTTGCTAAACGACTCGTTCCTTTCGTGAATCAATTGCTGCTAAATCTCAAAGCTCTGTTCATGGGAGATCCTTCTGCAACCATGAAGCTGGGTGTAACGCTGTTTGTGTTGGCAAGGTGGGGTAGCTTCATTACCCTTTGGAATGTCGTCAAATGTGGTGAACAGTGGTTGACACTTTGTGGGAGTTCTTGGAAGTTATGTTCTCACAAGAAGGCAGTGGCTGTTGCCCTCTTCTTCATAGTCTGGAGTTTTTCTTCGACTCTATATCGTGTTTGGGCAGTGTTCTTCGTGTTCGTGAGCTTTCGGTACTACGCGGGAGGTTAA

Protein sequence

MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGGSGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNPTRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGEQWLTLCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYYAGG

Homology

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BLAST of Cp4.1LG11g10190 vs. ExPASy Swiss-Prot
Match: Q56X72 (Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 4.8e-43
Identity = 97/221 (43.89%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 195 ETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLY 254
           + F  ++  LQ L+DL+MWRD+SRS LVFG G  +II   +  ++N SFISV+++MGL+Y
Sbjct: 218 DNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIY 277

Query: 255 LAAIFVHSSIFGRRKGIDSDDEH--YAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPS 314
           L  +FV  S+  R  G+  ++ H    + EE+V R  + ++P++N+ L  L+ALF GDPS
Sbjct: 278 LGLMFVLKSLIHR--GMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPS 337

Query: 315 ATMKLGVTLFVLARWGSFITLWNVVK----------------------CGEQWLTLCGSS 374
            T+K+GV LFVLAR GS ITLWN+ K                       G  W+     +
Sbjct: 338 TTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDA 397

Query: 375 WKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 392
           W+ C+HKKAVA+ALF +VW+ SS   RVWA F + V+FRYY
Sbjct: 398 WESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYY 436

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BLAST of Cp4.1LG11g10190 vs. ExPASy Swiss-Prot
Match: Q6DR04 (Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-22
Identity = 65/206 (31.55%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 207 LMDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFG 266
           + DL+MWRD+++S L FG G L  +   F K +N S  S +S++GL+ L   F+ +++  
Sbjct: 168 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 227

Query: 267 RRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLAR 326
           R+   +     + + E++V+R A+R++P  N  +     LF G+PS T+K+   L + A 
Sbjct: 228 RKN--EDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAE 287

Query: 327 WGSFITLWNVVKCG----------------------EQWLTLCGSSWKLCSHKKAVAVAL 386
           +G  ITLW +   G                      E+  T  G +W +CSHKK +A + 
Sbjct: 288 YGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSA 347

Query: 387 FFIVWSFSSTLYRVWAVFFVFVSFRY 391
               W+ +S   R++AVF + V FRY
Sbjct: 348 VTAFWNLTSIRTRIFAVFIILVIFRY 371

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BLAST of Cp4.1LG11g10190 vs. ExPASy Swiss-Prot
Match: Q8LDS3 (Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 2.5e-15
Identity = 83/341 (24.34%), Postives = 154/341 (45.16%), Query Frame = 0


Query: 78  IAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNPTRKKSEQSRKSAVGLTK 137
           + + +   S+  D ++ ++ + ARR ++ G   + G     +P   +  + R  A+  TK
Sbjct: 76  LRKSRTRLSNRFDMEAAEAAVTARRSKTKGG--QNGLLASPSPRNFRRSRLRSEAMVDTK 135

Query: 138 PSTNATGKTPPEK--NECREKAISSTPSQDFFDAFDEEIEKESFDVKEINLPERKKIAAE 197
            +T        EK  N+ ++K +  +  +             S D       + + +   
Sbjct: 136 ENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSD-------QPQDVCQG 195

Query: 198 TFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVII-LCYFMKNMNISFISVISHMGLLY 257
              R ++N+    DLIMWRD+++S L FG G +  +  C+  K  N S  S IS++GLL+
Sbjct: 196 DLERIRENIS---DLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGLLF 255

Query: 258 LAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPSAT 317
           L   F+ +++  R++  +       + E++V+R A+R++P  N  +     LF G+P+ T
Sbjct: 256 LGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAMT 315

Query: 318 MKLGVTLFVLARWGSFITLWNV-------------------------VKCGEQWLTLCGS 377
           +K+   + + A +G  ITLW +                         V+C ++       
Sbjct: 316 LKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFV---E 375

Query: 378 SWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRY 391
           +W +C+HKK VA +     W+ +S   R  AVF + V  RY
Sbjct: 376 AWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRY 399

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BLAST of Cp4.1LG11g10190 vs. NCBI nr
Match: XP_023546680.1 (reticulon-like protein B21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546681.1 reticulon-like protein B21 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 745 bits (1923), Expect = 2.69e-270
Identity = 394/408 (96.57%), Postives = 394/408 (96.57%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD 180
           TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD
Sbjct: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD 180

Query: 181 VKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240
           VKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMN
Sbjct: 181 VKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240

Query: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300
           ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL
Sbjct: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300

Query: 301 LNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG--------------EQWLTL 360
           LNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG              EQWLTL
Sbjct: 301 LNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLTL 360

Query: 361 CGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYYAGG 394
           CGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYYAGG
Sbjct: 361 CGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYYAGG 408

[Close]

BLAST of Cp4.1LG11g10190 vs. NCBI nr
Match: XP_022999357.1 (reticulon-like protein B21 [Cucurbita maxima])

HSP 1 Score: 719 bits (1855), Expect = 1.46e-259
Identity = 381/405 (94.07%), Postives = 385/405 (95.06%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD 180
            RKK++QSRKSAVGLTKPSTN TGKTPPEKNECREKAISS PSQDFFDAFDEEIEKESFD
Sbjct: 121 MRKKTDQSRKSAVGLTKPSTNGTGKTPPEKNECREKAISSPPSQDFFDAFDEEIEKESFD 180

Query: 181 VKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240
           VKEINLPERKKIAAETFPRNKQ LQRL+DLIMWRDISRSALVFGVGNLVIILCYFMKNMN
Sbjct: 181 VKEINLPERKKIAAETFPRNKQILQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240

Query: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300
           ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL
Sbjct: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300

Query: 301 LNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG--------------EQWLTL 360
            NLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG              EQWLTL
Sbjct: 301 QNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLTL 360

Query: 361 CGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
           CGSSWKLCSHKKAVAVALFFI WSFSSTLYRVWAVFFVFVSF+YY
Sbjct: 361 CGSSWKLCSHKKAVAVALFFIGWSFSSTLYRVWAVFFVFVSFQYY 405

[Close]

BLAST of Cp4.1LG11g10190 vs. NCBI nr
Match: KAG6599344.1 (Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 720 bits (1858), Expect = 2.17e-259
Identity = 379/406 (93.35%), Postives = 387/406 (95.32%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLP ASASPVSGG
Sbjct: 40  MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 99

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP
Sbjct: 100 SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 159

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEE-IEKESF 180
           TRKK+EQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEE IEKESF
Sbjct: 160 TRKKTEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEEIEKESF 219

Query: 181 DVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNM 240
           DVKEINLPERKKI AETFPRNKQNLQRL+DLIMWRDISRSALVFGVGNLVIILCYFMKNM
Sbjct: 220 DVKEINLPERKKIGAETFPRNKQNLQRLLDLIMWRDISRSALVFGVGNLVIILCYFMKNM 279

Query: 241 NISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQL 300
           NISFISVISHMGLLYLAAIFVHSS+FGRRKG+DSDDEHYAIEEEEVIRF KRLVPF+NQL
Sbjct: 280 NISFISVISHMGLLYLAAIFVHSSVFGRRKGMDSDDEHYAIEEEEVIRFTKRLVPFLNQL 339

Query: 301 LLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG--------------EQWLT 360
           L NLKALFMGDPSATMKLGVTLFVLARWG+FITLWNV+KCG              EQWLT
Sbjct: 340 LQNLKALFMGDPSATMKLGVTLFVLARWGNFITLWNVIKCGFIGVFTLPKLITHGEQWLT 399

Query: 361 LCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
           LCGSSWKLCSHKKAVAVALFF+VWSFSSTLYRVWAVFFVFVSFRYY
Sbjct: 400 LCGSSWKLCSHKKAVAVALFFLVWSFSSTLYRVWAVFFVFVSFRYY 445

[Close]

BLAST of Cp4.1LG11g10190 vs. NCBI nr
Match: XP_022946666.1 (reticulon-like protein B21 [Cucurbita moschata])

HSP 1 Score: 716 bits (1849), Expect = 1.20e-258
Identity = 380/406 (93.60%), Postives = 385/406 (94.83%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLP ASASPVSGG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPE SSSGDEQSRKSPIPARRLRSNGSPIKPGEK ERNP
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPELSSSGDEQSRKSPIPARRLRSNGSPIKPGEKIERNP 120

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEE-IEKESF 180
           TRKK+EQSRKSAVGLTKPSTN TGKTPPEKNECREKAISSTP QDFFDAFDEE IEKESF
Sbjct: 121 TRKKTEQSRKSAVGLTKPSTNGTGKTPPEKNECREKAISSTPFQDFFDAFDEEEIEKESF 180

Query: 181 DVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNM 240
           DVKEINLPERKKIAAETFPRNKQNLQRL+DLIMWRDISRSALVFGVGNLVIILCYFMKNM
Sbjct: 181 DVKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNM 240

Query: 241 NISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQL 300
           NISFISVISHMGLLYLAAIFVHSSIFGRRKG+DSDDEHYAIEEEEVIRFAKRLVPF+NQL
Sbjct: 241 NISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQL 300

Query: 301 LLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG--------------EQWLT 360
           L NLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG              EQWLT
Sbjct: 301 LQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLT 360

Query: 361 LCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
           LCGSSWKLCSHKKAVAVALFF+VWSFSSTLYRVWAVFFVFVSFRYY
Sbjct: 361 LCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYY 406

[Close]

BLAST of Cp4.1LG11g10190 vs. NCBI nr
Match: KAG7030334.1 (Reticulon-like protein B21 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 637 bits (1644), Expect = 4.21e-228
Identity = 345/391 (88.24%), Postives = 353/391 (90.28%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLP ASASPVSGG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD 180
           TRKK+EQSRKSAVGLTKPSTNA GKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD
Sbjct: 121 TRKKTEQSRKSAVGLTKPSTNAAGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD 180

Query: 181 VKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240
           VKEINLPERKKIAAETFPRNKQNLQRL+DLIMWRDISRSALVFGVGNLVIILCYFMKNMN
Sbjct: 181 VKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240

Query: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300
           ISFISVISHMGLLYLAAIFVHSSIFGRRKG+DSDDEHYAIEEEEVIRFAKRLVPF+NQLL
Sbjct: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQLL 300

Query: 301 LNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGEQWLTLCGSSWKLCSHKKAV 360
            NLKALFMGDPSATMKLGVTLFVLARWG+FITLWNV+KCG   +       KL +H    
Sbjct: 301 QNLKALFMGDPSATMKLGVTLFVLARWGNFITLWNVIKCGFIGVFTLP---KLITH---- 360

Query: 361 AVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
                               VFFVFVSFRYY
Sbjct: 361 --------------------VFFVFVSFRYY 364

[Close]

BLAST of Cp4.1LG11g10190 vs. ExPASy TrEMBL
Match: A0A6J1KAN6 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493754 PE=4 SV=1)

HSP 1 Score: 719 bits (1855), Expect = 7.07e-260
Identity = 381/405 (94.07%), Postives = 385/405 (95.06%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEEIEKESFD 180
            RKK++QSRKSAVGLTKPSTN TGKTPPEKNECREKAISS PSQDFFDAFDEEIEKESFD
Sbjct: 121 MRKKTDQSRKSAVGLTKPSTNGTGKTPPEKNECREKAISSPPSQDFFDAFDEEIEKESFD 180

Query: 181 VKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240
           VKEINLPERKKIAAETFPRNKQ LQRL+DLIMWRDISRSALVFGVGNLVIILCYFMKNMN
Sbjct: 181 VKEINLPERKKIAAETFPRNKQILQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNMN 240

Query: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300
           ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL
Sbjct: 241 ISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLL 300

Query: 301 LNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG--------------EQWLTL 360
            NLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG              EQWLTL
Sbjct: 301 QNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLTL 360

Query: 361 CGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
           CGSSWKLCSHKKAVAVALFFI WSFSSTLYRVWAVFFVFVSF+YY
Sbjct: 361 CGSSWKLCSHKKAVAVALFFIGWSFSSTLYRVWAVFFVFVSFQYY 405

[Close]

BLAST of Cp4.1LG11g10190 vs. ExPASy TrEMBL
Match: A0A6J1G4A6 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450663 PE=4 SV=1)

HSP 1 Score: 716 bits (1849), Expect = 5.80e-259
Identity = 380/406 (93.60%), Postives = 385/406 (94.83%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLP ASASPVSGG
Sbjct: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPVASASPVSGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNP 120
           SGRRKTWKSDEGFNSILIAEEKPE SSSGDEQSRKSPIPARRLRSNGSPIKPGEK ERNP
Sbjct: 61  SGRRKTWKSDEGFNSILIAEEKPELSSSGDEQSRKSPIPARRLRSNGSPIKPGEKIERNP 120

Query: 121 TRKKSEQSRKSAVGLTKPSTNATGKTPPEKNECREKAISSTPSQDFFDAFDEE-IEKESF 180
           TRKK+EQSRKSAVGLTKPSTN TGKTPPEKNECREKAISSTP QDFFDAFDEE IEKESF
Sbjct: 121 TRKKTEQSRKSAVGLTKPSTNGTGKTPPEKNECREKAISSTPFQDFFDAFDEEEIEKESF 180

Query: 181 DVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNM 240
           DVKEINLPERKKIAAETFPRNKQNLQRL+DLIMWRDISRSALVFGVGNLVIILCYFMKNM
Sbjct: 181 DVKEINLPERKKIAAETFPRNKQNLQRLVDLIMWRDISRSALVFGVGNLVIILCYFMKNM 240

Query: 241 NISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQL 300
           NISFISVISHMGLLYLAAIFVHSSIFGRRKG+DSDDEHYAIEEEEVIRFAKRLVPF+NQL
Sbjct: 241 NISFISVISHMGLLYLAAIFVHSSIFGRRKGMDSDDEHYAIEEEEVIRFAKRLVPFLNQL 300

Query: 301 LLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG--------------EQWLT 360
           L NLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG              EQWLT
Sbjct: 301 LQNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCGFIGVFTLPKLITHGEQWLT 360

Query: 361 LCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
           LCGSSWKLCSHKKAVAVALFF+VWSFSSTLYRVWAVFFVFVSFRYY
Sbjct: 361 LCGSSWKLCSHKKAVAVALFFVVWSFSSTLYRVWAVFFVFVSFRYY 406

[Close]

BLAST of Cp4.1LG11g10190 vs. ExPASy TrEMBL
Match: A0A5A7V8P0 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001050 PE=4 SV=1)

HSP 1 Score: 588 bits (1516), Expect = 5.11e-208
Identity = 319/415 (76.87%), Postives = 347/415 (83.61%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDL+R RAA AARGNVVAGSVWESRIR DEVRGG+KVFNGDD NAECG+P  +AS  +GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESS-SSGDEQSRKSPIPARRLRSNGSPIKP----GEK 120
           SGRRKTWKSDEGFN ILIAEEKPESS SSGDEQSRKSP P+RRLRSNGSP KP    GEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNPTRKKSEQSRKSAVGLTKPSTNATGKTPPEK-----NECREKAISSTPSQDFFDAF 180
           TERN TRKK++QSRKS V LTKP TN  GKT  EK     NEC+EK ISS+ SQDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVALTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 DEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVI 240
           +EEIEKESFDVKEINLPERKKI A+TFP NKQ LQ LMDLIMWRD SRS LVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 ILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAK 300
           IL  F+KN+NISFIS+ISHMGLLYL AIFVHSSIFGRRK IDSDDE++ +EEE++IRFAK
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 RLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG---------- 360
           RLVPFVN+LL NLKALF GD SATMK+GV LFVLA+WGSFITLWNV+K G          
Sbjct: 301 RLVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ----EQWLTLCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
               E WL LCGSSWKLCSHK+ V VA+FF+VW+FSSTLYRVWA F V VSFRYY
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYY 415

[Close]

BLAST of Cp4.1LG11g10190 vs. ExPASy TrEMBL
Match: A0A1S3C3D4 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496431 PE=4 SV=1)

HSP 1 Score: 588 bits (1516), Expect = 5.11e-208
Identity = 319/415 (76.87%), Postives = 347/415 (83.61%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDL+R RAA AARGNVVAGSVWESRIR DEVRGG+KVFNGDD NAECG+P  +AS  +GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESS-SSGDEQSRKSPIPARRLRSNGSPIKP----GEK 120
           SGRRKTWKSDEGFN ILIAEEKPESS SSGDEQSRKSP P+RRLRSNGSP KP    GEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNPTRKKSEQSRKSAVGLTKPSTNATGKTPPEK-----NECREKAISSTPSQDFFDAF 180
           TERN TRKK++QSRKS VGLTKP TN  GKT  EK     NEC+EK ISS+ SQDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 DEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVI 240
           +EEIEKESFDVKEINLPERKKI A+TFP NKQ LQ LMDLIMWRD SRS LVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 ILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAK 300
           IL  F+KN+NISFIS+ISHMGLLYL AIFVHSSIFGRRK IDSDDE++ +EEE++IRFAK
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 RLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG---------- 360
           R VPFVN+LL NLKALF GD SATMK+GV LFVLA+WGSFITLWNV+K G          
Sbjct: 301 RSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ----EQWLTLCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 391
               E WL LCGSSWKLCSHK+ V VA+FF+VW+FSSTLYRVWA F V VSFRYY
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAAFIVLVSFRYY 415

[Close]

BLAST of Cp4.1LG11g10190 vs. ExPASy TrEMBL
Match: A0A1S4E0Y2 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496431 PE=4 SV=1)

HSP 1 Score: 576 bits (1485), Expect = 5.82e-204
Identity = 312/405 (77.04%), Postives = 340/405 (83.95%), Query Frame = 0


Query: 1   MDLTRLRAAAAARGNVVAGSVWESRIRLDEVRGGVKVFNGDDGNAECGLPAASASPVSGG 60
           MDL+R RAA AARGNVVAGSVWESRIR DEVRGG+KVFNGDD NAECG+P  +AS  +GG
Sbjct: 1   MDLSRRRAAVAARGNVVAGSVWESRIRFDEVRGGIKVFNGDDENAECGVPTTAASAAAGG 60

Query: 61  SGRRKTWKSDEGFNSILIAEEKPESS-SSGDEQSRKSPIPARRLRSNGSPIKP----GEK 120
           SGRRKTWKSDEGFN ILIAEEKPESS SSGDEQSRKSP P+RRLRSNGSP KP    GEK
Sbjct: 61  SGRRKTWKSDEGFNPILIAEEKPESSPSSGDEQSRKSPTPSRRLRSNGSPNKPVQVSGEK 120

Query: 121 TERNPTRKKSEQSRKSAVGLTKPSTNATGKTPPEK-----NECREKAISSTPSQDFFDAF 180
           TERN TRKK++QSRKS VGLTKP TN  GKT  EK     NEC+EK ISS+ SQDFFDAF
Sbjct: 121 TERNSTRKKTDQSRKSVVGLTKPPTNGIGKTSSEKSFKELNECKEKVISSSTSQDFFDAF 180

Query: 181 DEEIEKESFDVKEINLPERKKIAAETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVI 240
           +EEIEKESFDVKEINLPERKKI A+TFP NKQ LQ LMDLIMWRD SRS LVFGVGNLVI
Sbjct: 181 EEEIEKESFDVKEINLPERKKIIAQTFPGNKQKLQTLMDLIMWRDFSRSGLVFGVGNLVI 240

Query: 241 ILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAK 300
           IL  F+KN+NISFIS+ISHMGLLYL AIFVHSSIFGRRK IDSDDE++ +EEE++IRFAK
Sbjct: 241 ILSCFIKNINISFISLISHMGLLYLTAIFVHSSIFGRRKRIDSDDENFVVEEEDMIRFAK 300

Query: 301 RLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLARWGSFITLWNVVKCG---------- 360
           R VPFVN+LL NLKALF GD SATMK+GV LFVLA+WGSFITLWNV+K G          
Sbjct: 301 RSVPFVNELLQNLKALFRGDSSATMKVGVLLFVLAKWGSFITLWNVLKIGFIGVFTLPKL 360

Query: 361 ----EQWLTLCGSSWKLCSHKKAVAVALFFIVWSFSSTLYRVWAV 381
               E WL LCGSSWKLCSHK+ V VA+FF+VW+FSSTLYRVWAV
Sbjct: 361 ITHGEHWLKLCGSSWKLCSHKRGVFVAIFFLVWNFSSTLYRVWAV 405

[Close]

BLAST of Cp4.1LG11g10190 vs. TAIR 10
Match: AT5G58000.1 (Reticulon family protein )

HSP 1 Score: 176.8 bits (447), Expect = 3.4e-44
Identity = 97/221 (43.89%), Postives = 137/221 (61.99%), Query Frame = 0


Query: 195 ETFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLY 254
           + F  ++  LQ L+DL+MWRD+SRS LVFG G  +II   +  ++N SFISV+++MGL+Y
Sbjct: 218 DNFTHSQSKLQSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIY 277

Query: 255 LAAIFVHSSIFGRRKGIDSDDEH--YAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPS 314
           L  +FV  S+  R  G+  ++ H    + EE+V R  + ++P++N+ L  L+ALF GDPS
Sbjct: 278 LGLMFVLKSLIHR--GMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSGDPS 337

Query: 315 ATMKLGVTLFVLARWGSFITLWNVVK----------------------CGEQWLTLCGSS 374
            T+K+GV LFVLAR GS ITLWN+ K                       G  W+     +
Sbjct: 338 TTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRFRDA 397

Query: 375 WKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRYY 392
           W+ C+HKKAVA+ALF +VW+ SS   RVWA F + V+FRYY
Sbjct: 398 WESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRYY 436

[Close]

BLAST of Cp4.1LG11g10190 vs. TAIR 10
Match: AT2G20590.1 (Reticulon family protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.6e-23
Identity = 65/206 (31.55%), Postives = 107/206 (51.94%), Query Frame = 0


Query: 207 LMDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFG 266
           + DL+MWRD+++S L FG G L  +   F K +N S  S +S++GL+ L   F+ +++  
Sbjct: 168 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 227

Query: 267 RRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLAR 326
           R+   +     + + E++V+R A+R++P  N  +     LF G+PS T+K+   L + A 
Sbjct: 228 RKN--EDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAE 287

Query: 327 WGSFITLWNVVKCG----------------------EQWLTLCGSSWKLCSHKKAVAVAL 386
           +G  ITLW +   G                      E+  T  G +W +CSHKK +A + 
Sbjct: 288 YGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVERVKTRIGEAWGVCSHKKILAGSA 347

Query: 387 FFIVWSFSSTLYRVWAVFFVFVSFRY 391
               W+ +S   R++AVF + V FRY
Sbjct: 348 VTAFWNLTSIRTRIFAVFIILVIFRY 371

[Close]

BLAST of Cp4.1LG11g10190 vs. TAIR 10
Match: AT2G20590.2 (Reticulon family protein )

HSP 1 Score: 85.9 bits (211), Expect = 8.0e-17
Identity = 45/134 (33.58%), Postives = 77/134 (57.46%), Query Frame = 0


Query: 207 LMDLIMWRDISRSALVFGVGNLVIILCYFMKNMNISFISVISHMGLLYLAAIFVHSSIFG 266
           + DL+MWRD+++S L FG G L  +   F K +N S  S +S++GL+ L   F+ +++  
Sbjct: 168 ISDLVMWRDVAKSTLWFGFGCLSFLSSCFAKGVNFSVFSAVSNLGLVLLCGSFLSNTLCQ 227

Query: 267 RRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPSATMKLGVTLFVLAR 326
           R+   +     + + E++V+R A+R++P  N  +     LF G+PS T+K+   L + A 
Sbjct: 228 RKN--EDTKRAFHVSEDDVLRSARRVLPATNFFISKTSELFSGEPSMTLKVTPFLLLGAE 287

Query: 327 WGSFITLWNVVKCG 341
           +G  ITLW +   G
Sbjct: 288 YGHLITLWRLSAFG 299

[Close]

BLAST of Cp4.1LG11g10190 vs. TAIR 10
Match: AT4G28430.1 (Reticulon family protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-16
Identity = 83/341 (24.34%), Postives = 154/341 (45.16%), Query Frame = 0


Query: 78  IAEEKPESSSSGDEQSRKSPIPARRLRSNGSPIKPGEKTERNPTRKKSEQSRKSAVGLTK 137
           + + +   S+  D ++ ++ + ARR ++ G   + G     +P   +  + R  A+  TK
Sbjct: 76  LRKSRTRLSNRFDMEAAEAAVTARRSKTKGG--QNGLLASPSPRNFRRSRLRSEAMVDTK 135

Query: 138 PSTNATGKTPPEK--NECREKAISSTPSQDFFDAFDEEIEKESFDVKEINLPERKKIAAE 197
            +T        EK  N+ ++K +  +  +             S D       + + +   
Sbjct: 136 ENTEPIVVVTDEKKQNQRKQKKLGRSKKEKHSSVPLLASPSPSSD-------QPQDVCQG 195

Query: 198 TFPRNKQNLQRLMDLIMWRDISRSALVFGVGNLVII-LCYFMKNMNISFISVISHMGLLY 257
              R ++N+    DLIMWRD+++S L FG G +  +  C+  K  N S  S IS++GLL+
Sbjct: 196 DLERIRENIS---DLIMWRDVAKSTLWFGFGCICFLSTCFAAKGFNFSVFSAISYLGLLF 255

Query: 258 LAAIFVHSSIFGRRKGIDSDDEHYAIEEEEVIRFAKRLVPFVNQLLLNLKALFMGDPSAT 317
           L   F+ +++  R++  +       + E++V+R A+R++P  N  +     LF G+P+ T
Sbjct: 256 LGVSFLSNTL--RQRVTEEARRELKLSEDDVLRIARRMLPITNLAISKTSELFSGEPAMT 315

Query: 318 MKLGVTLFVLARWGSFITLWNV-------------------------VKCGEQWLTLCGS 377
           +K+   + + A +G  ITLW +                         V+C ++       
Sbjct: 316 LKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKVECAQRRFV---E 375

Query: 378 SWKLCSHKKAVAVALFFIVWSFSSTLYRVWAVFFVFVSFRY 391
           +W +C+HKK VA +     W+ +S   R  AVF + V  RY
Sbjct: 376 AWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRY 399

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g10190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56X72	4.8e-43	43.89	Reticulon-like protein B21 OS=Arabidopsis thaliana OX=3702 GN=RTNLB21 PE=2 SV=2	[more]
Q6DR04	3.6e-22	31.55	Reticulon-like protein B17 OS=Arabidopsis thaliana OX=3702 GN=RTNLB17 PE=2 SV=1	[more]
Q8LDS3	2.5e-15	24.34	Reticulon-like protein B18 OS=Arabidopsis thaliana OX=3702 GN=RTNLB18 PE=2 SV=2	[more]

BLAST of Cp4.1LG11g10190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546680.1	2.69e-270	96.57	reticulon-like protein B21 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546681...	[more]
XP_022999357.1	1.46e-259	94.07	reticulon-like protein B21 [Cucurbita maxima]	[more]
KAG6599344.1	2.17e-259	93.35	Reticulon-like protein B21, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946666.1	1.20e-258	93.60	reticulon-like protein B21 [Cucurbita moschata]	[more]
KAG7030334.1	4.21e-228	88.24	Reticulon-like protein B21 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG11g10190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAN6	7.07e-260	94.07	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493754 PE=4 SV=1	[more]
A0A6J1G4A6	5.80e-259	93.60	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450663 PE=4 SV=1	[more]
A0A5A7V8P0	5.11e-208	76.87	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3C3D4	5.11e-208	76.87	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496431 PE=4 SV=1	[more]
A0A1S4E0Y2	5.82e-204	77.04	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496431 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g10190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58000.1	3.4e-44	43.89	Reticulon family protein	[more]
AT2G20590.1	2.6e-23	31.55	Reticulon family protein	[more]
AT2G20590.2	8.0e-17	33.58	Reticulon family protein	[more]
AT4G28430.1	1.8e-16	24.34	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 208..337 e-value: 1.4E-21 score: 77.1
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 207..337 score: 12.021901
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..130
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..154
None	No IPR available	PANTHER	PTHR46626:SF1	RETICULON-LIKE PROTEIN B21	coord: 1..191
None	No IPR available	PANTHER	PTHR46626:SF1	RETICULON-LIKE PROTEIN B21	coord: 194..340
None	No IPR available	PANTHER	PTHR46626:SF1	RETICULON-LIKE PROTEIN B21	coord: 338..391
IPR044647	Reticulon-like protein B17/18/21	PANTHER	PTHR46626	RETICULON-LIKE PROTEIN B17	coord: 1..191 coord: 338..391
IPR044647	Reticulon-like protein B17/18/21	PANTHER	PTHR46626	RETICULON-LIKE PROTEIN B17	coord: 194..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g10190.1	Cp4.1LG11g10190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane