Cp4.1LG11g10010 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTTTCTTTTATGAACACGGCGGCGTTTCTTTTCATTTTTCTCTGTGTTTTCCACATGTCGGCGGCGAGGGTCATGACCGGAGAGCGGTGGCTTCCGGCACCGAGGGTGCCCATGGCGATGCTGCGAGGTGCCGTGCCTAGTTCCAGTAGGAATCCATGTTCGTTTATTCCGGGGTTCAGCCGTGGCCGATGTACGTTGAGCGAGGCGGACGACGGTGCCGCCGCTGTCCACGGTGGCTCCTCCGCCTTATCTCGGCTGAATGCTGATGGGTTTGCAGCGGCTTCCATGGCTAACAAAACCCAGAAGAAAGATCCTTCCTTGAGGCCTTGA ATGGGTTTTTCTTTTATGAACACGGCGGCGTTTCTTTTCATTTTTCTCTGTGTTTTCCACATGTCGGCGGCGAGGGTCATGACCGGAGAGCGGTGGCTTCCGGCACCGAGGGTGCCCATGGCGATGCTGCGAGGTGCCGTGCCTAGTTCCAGTAGGAATCCATGTTCGTTTATTCCGGGGTTCAGCCGTGGCCGATGTACGTTGAGCGAGGCGGACGACGGTGCCGCCGCTGTCCACGGTGGCTCCTCCGCCTTATCTCGGCTGAATGCTGATGGGTTTGCAGCGGCTTCCATGGCTAACAAAACCCAGAAGAAAGATCCTTCCTTGAGGCCTTGA ATGGGTTTTTCTTTTATGAACACGGCGGCGTTTCTTTTCATTTTTCTCTGTGTTTTCCACATGTCGGCGGCGAGGGTCATGACCGGAGAGCGGTGGCTTCCGGCACCGAGGGTGCCCATGGCGATGCTGCGAGGTGCCGTGCCTAGTTCCAGTAGGAATCCATGTTCGTTTATTCCGGGGTTCAGCCGTGGCCGATGTACGTTGAGCGAGGCGGACGACGGTGCCGCCGCTGTCCACGGTGGCTCCTCCGCCTTATCTCGGCTGAATGCTGATGGGTTTGCAGCGGCTTCCATGGCTAACAAAACCCAGAAGAAAGATCCTTCCTTGAGGCCTTGA MGFSFMNTAAFLFIFLCVFHMSAARVMTGERWLPAPRVPMAMLRGAVPSSSRNPCSFIPGFSRGRCTLSEADDGAAAVHGGSSALSRLNADGFAAASMANKTQKKDPSLRP Homology
BLAST of Cp4.1LG11g10010 vs. NCBI nr
Match: KAG6599331.1 (hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175 bits (443), Expect = 1.41e-54 Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. NCBI nr
Match: KGN60782.1 (hypothetical protein Csa_019261 [Cucumis sativus]) HSP 1 Score: 153 bits (386), Expect = 1.28e-45 Identity = 80/109 (73.39%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. NCBI nr
Match: KAA0063581.1 (hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa] >TYJ97908.1 hypothetical protein E5676_scaffold285G001240 [Cucumis melo var. makuwa]) HSP 1 Score: 145 bits (365), Expect = 1.68e-42 Identity = 78/109 (71.56%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. NCBI nr
Match: KAG6586324.1 (hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129 bits (323), Expect = 5.16e-36 Identity = 74/115 (64.35%), Postives = 83/115 (72.17%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. NCBI nr
Match: XP_021888699.1 (uncharacterized protein LOC110807772 [Carica papaya]) HSP 1 Score: 59.3 bits (142), Expect = 1.62e-08 Identity = 37/90 (41.11%), Postives = 51/90 (56.67%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. ExPASy TrEMBL
Match: A0A0A0LJ84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G010180 PE=4 SV=1) HSP 1 Score: 153 bits (386), Expect = 6.18e-46 Identity = 80/109 (73.39%), Postives = 88/109 (80.73%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. ExPASy TrEMBL
Match: A0A5A7VCY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001240 PE=4 SV=1) HSP 1 Score: 145 bits (365), Expect = 8.14e-43 Identity = 78/109 (71.56%), Postives = 86/109 (78.90%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. ExPASy TrEMBL
Match: A0A5B6Z7Q1 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_009663 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 5.80e-08 Identity = 40/101 (39.60%), Postives = 52/101 (51.49%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. ExPASy TrEMBL
Match: A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.30e-07 Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of Cp4.1LG11g10010 vs. ExPASy TrEMBL
Match: A0A2N9F903 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11524 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 4.97e-07 Identity = 37/91 (40.66%), Postives = 49/91 (53.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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