Cp4.1LG11g09170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g09170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	DNA polymerase zeta catalytic subunit
Location	Cp4.1LG11: 7401640 .. 7406912 (-)
RNA-Seq Expression	Cp4.1LG11g09170
Synteny	Cp4.1LG11g09170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTGCAGACCTTCTTTTTAGGGTTTAAGCTCTCCTGGTTCAGTCGGTCCTCCCATGGAGGGTTTTAGCAATCCAGCTCTAACCTAATCCCTCTCTTCGACGATGGCGCAGTCCCCCTTCTCTCTCCTCTTCCTTAAGCGTCTTTCCTTCTCTTCTCGATTCTCTAATGCACCTCTTTCTTCGCCCCTCCTTTCTCCTTTCCTCACTATCGGATCATCCAAGCGATTTTTCACCTCCGAAATCTCGTCACCCCCCTCATCACCTTCTTCCAATCCCAAACCCAATTCCCTTTCAGCCCGAATGAGCTTCATCTTCGATCAAATCGACGCCATTGAAAAAGAGCGCTCTCAGAAGGACCAAACTCTGCAGAGAATTCGAGCCTGGCGTGAGTCGAAGGCCAACCAGAATCCGCCCGTCGAGGATGGGCAACTGGAATCGACGTTAGGGAGTGGTAATCTTGCGGATAATGTTAATAATTCGGAGTCTTCTTTGAGAATGGACGAAGAAAATGAGGTGGAAAGGACGGAGAAGAAGAGGAACGAAATTGAATTGGTGCATCCATGGCCGGAGTGGATCGAGTTGATGGAAAGGTTAGTTCATCAGAATTACTTTGATCACAGGAGGAAAGATGAGAACAAGATGGTCGAAGAATTGGGATTCAGTGCCTCTGACCTTGCTTTGGAGGAGGATGTAGGGTTGGACTTGTCCAAGGATTTTAAGGCAGTTTATACTGCGTGTCTGAATTTTGGGAAGGACCGGTTCGACATTCTCAGGTTAGTAGCTCTGCATTTCCACTTCAGTATGTGAAAAAAGTTTGACAATACTTGCTCTGCGATTTCACTTGAGTGGTATGTTGTAAAGACAGTTTCTTGGCCCATTGCATCTCCTTTTGAACAGAATTTCTTGTTTACTCTTTGAAAAATGTTCTGAATTGCACGGAATATAAGTCGTCTGAAATTATTACTGCATCATGATCTTCTGTTCTTGTTGGGATTATGGGCGTTGATAGTTTTGCCTTTTCTTTGAACGACAGATATTTCCGGCAGTTAAAGAAGAAAACTTAGTGTATCAATTGTAGGAGGATAAGTGCTACTGGGATTATAGTCTTTTAGAATCCCCAGTTTTAGCTATAATTTTGTAACGACCCAAATCCACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCTCCTCAAGGCTTTAAAACGCGTCGGCTAGGGGAAGGTTTCCACACCCTTATAGGTGTTTTGTTCTCCTCTCCAACTAATGTGGGACATTACAGATTTTCTGTGGGATCTTTGTATTCTTTCATTTATAAGCTAGATTTTTCTTAGAAAAATGATAATGAGATTGCATACGAGTACATTTGTTTTGATAGTTGTAGTAAAGTTGAACCTTCCACTCGAGTTACATTTTTCCCCCTTATTGATCTGCTTTTCCATTTTAATCGGAGCGAAAGCTAGGAATGTCTCTGACAAAAATTCTAATATTTCTTTTCTTTTCCTTTCCAACCATTTATGTGTTAATTTCTTCTTGTCTTTAGGTTAATCAACCATATTGGATTTTCGTTTTCATGTGCAGTTAATCCTTGTTTTGGAGATGTGTATGTAAATTTCCAGAATAGATGCGATTTTTGTTAATACTCATTCTATATATATACACTTTTTATTGCAGGTCGTTGTCAAGAAAAGACATCCAAATTTTGGTTGGTTTTGGGTGCCCAAGTCCAGACAAGAAGGTTGTTTTCTCTGCAAAACTCTTGAGGAAGCTCGTTCATCTTGATGAAGGAGATGTGAGTACTTCTTTTCATGTTGTATTTGTTCCTAGCATATCATGGAATAATGAAAATGATCATAATACTGAAAATGCTTTGTTTTGCTTCCAACTTGTTTATTGTCTTACCGTTTACAGGTTTTTGGCTTCTTTAGTTTTTCCTTCACACCTTTAACTTTTAACTAGCTATGTTTTGAATTCTATGTTAGGTACAGATCACGATTAGGGTTTATAGTTCATTGTATTGCTGAATTGGAATAAAACTTTTCTTCTGGTAGTAACATGCTACCGATTAATGATAATTCATTAGGACCATTTTCAGATATTATTTCCTCCTTAGGGCAGGAATTAGTAACAAAATAATATATATTTTTTCAAATAGTAACATTTAGTCTTAACATACATTGAAGATATTATTTTATTACTGTCCTTGCCTGATATTCCCCCCACAATTTTATTTTCTGCTGCTTGTTTGACCTAAGTAGTATGGTTTACTTTTTTATTTTTTCAATCTTTGTTGCATTAATGGTGATGAGGTGCTCTATGCTCTTCTCTGTCTTCAGGTTTGCAGTTCCTGCAGTTTAAGAAATTCTTGTGAAAGAGCATATTTGGTGACTAATAAAGAAGATGAGGCTCGCACAATCGATATTATGCGACTTTTATTTACTTTTGGTTTTGATCACATGAATGGAACTGTTGTCAATGATTCCCTTCTGAAGCGAAAAACGGTTAAAACAGTTGTTCGCAAATTACTTCATGGGGTTGTCAAGTTGGGTTCAGTCCCAATAGATCCTACTCTTTCTCCTCCTGTAATCAAAAGGCCTCCACCAAAAGTGAAGCAGCCCCCACCTCCACCGAAGAAGCGAGTAGGACGTGATGATGTTGAGATGAAAAAAGGGGATTGGCTTTGTCCCAAGTACGTGTTTTTTACGTTGTTCCAAGCGTTTAATTTATTCTTGCTGGAAGACTATTATGCTTTCTTTGAAGTTATAACTTTATGTAAGCGGTTTATTGCTTCATATTTAAGGCTCATATGGAACTTAGAAAACCAGATCCTAGAAACTTATAGTATTATAATTGGCGATACTATTATGTGATGGTGGTCTTTAGTGTTAAACTACTGTATTTTGCCTTAGCCTTGTGTAAATACACTGTACTAGTAGCAGTTGTCAAAATTTTGGCGTATCTTTAGATTGCTCAATAATCTCTTTTCCAGTTTCACATTGAGTATGATGTCTGAAATGCAAATTAACAAACCACTTTCAGGTGCGACTTCATGAACTTTGCAAAAAATACGGTGTGCCTGCAGTGTGACGCCAAACGTCCTAAACGGCAGCTGCTACCAGGCGAATGGGAATGCCCAGAGTAAGAATTTTCACATATTAATCTTTTCTTCATTTAGATAATTCAACTGTACGATGGTGGGTTCCATCGATCATTATTTATTTGGGAAACAAAGTAATATTGTTGATTTTCTTTCTTTGTTGGGGGAGTTCCAATGTCTGCTGTGGAATGGATGTTCGCTTTAGTGTCCTTGCCCTTATAGAGTAGAGATCTTTTCTAGTCACTCCCTCCTTTGTCGAATCAACCATTCTCGTTGGAGAGATTCAATTTTTGCCTTGATGTGTAGGATGAAAATTCCCAAGATTCTCCATGGTAGGGTGAATACTTTGGTCATGGTGTCTAGGAAGATGACTAATTTGATGGAGCCGTGGTGTTGCATTCTTTGCAACATGGTTGTATAGGACCTTGATCATATCCTTTTGATGTGGGCTTCAGCTACGAAATTTTTGTGATTATTTGCGTAGGATTTTAGGAGACGCCGTGAGAAATAAAATAGATCATAAAAAAATCAAAGTGGCTGAAGCCGAAATAACTAATTTTGGATGTTCAGCCACAACACTATATGATATTGTGTAGAAGCAGAGATTAGATTTTGGTGGTCAGTTCCTGATTCTCTATTCGTTTTGTTATCTGTGGCAGATGCAACTTTCTAAACTATAGGAGAAATATGGCATGTTTCCATTGTGAATGCAAGCGGCCAACAGACACATTTTTAGATAATGAAAAGCAAGAAAGTCAGCACGTTCCTTCGAAGTTCGAAAAGATCGCCAATAGGCAAGAGGTCTCTAATGCTTGGAATTTCGACTTCGACGATGATGAGTCAGATGGGGCAGATGTTGCAGCTTTTGAGTATGCAGATTCATCAGTTGCAGCCGAAGGATCTCATGCCGATAATCTGGCGAGAGGAAGCAAATTTAACTCCGATCTCCCGGAAAGACAGCACTCTGATGCTGGAAATAGAGGTCCAGGCGTCGGATTTGACGATTTTGTCGATGAGGAGGACGATATCGACAATTATGAGCTAGATAGCTCAGTGAACAATTCAGGAAGGCAGCCTCATTCGGTTGATTTTTCTGACATTGAAGGGCACTCAGGGTCAGAAGATGGTGATGACTTTGGCCATAGATCTGGTGTCCCATCTTATAATAAGCGTCCAAGACGTCAACAAGCAGCTTTCTCTGATTCTGAGGGCGATGAACTTGATTCTGATGACGATATTTCTGCTAAGAAGAATTGGAAATCTAGTCATCTGACCAGTTCAAGACAGAAAAGTAGAGACAATGGTCGATCGAGGAGGGGATTAAGCTATGGTTCTGATGAAAACCTCGACTCCGACCTCGATGAGGATTTAGATGAAAGACCTCGATCTAGACGGAGTGAAGGAAAGGATTTCGACTCCAATAGGAAGCATTTTCAAACGAGAGGAAGTTCTCGTATGGGCGGTCGATCATCCGAATCAGATTTTGATGATTTTGATAGAGGTATGCGTAGACAAAAATTGAAAGGGAATCAGAGGGAAAATAATCGAAGGGGAAGCGACACTCGAGCTCGTGGAGATAAATACAGTAGAGGAAGTGAGTTTCAGTCTAACAATTTCAGAAATGGTAGAAAGAACACATTTGATGACGATTTTGATGATTTTGGTGACAAGTCCCATCGGTCTCGTGGTAGCAATTCAAGATTTCGTGGGAACAGTCATGGCGGGCGAGGAACATATAGCTCGGGGAGTCCTAAAGAAGGTTACAAGAAAGATCGACCAAGAAGGTATAATGAATACGATACAACCACGGATAAGGATTATGGTGACTTCAAAAACAGTCGACGTGTTATTGAAAGATAGAGCCTATTTGAAGAATAATTCATAATTTGGGTTCGGGCTCGGGTTCGGGTTACTGATTTCATGTTCATCTCACTGCTAACCAAAGATCTATTATGGGATTGCTGCAAAATCAATCCTGTTTTGTTCTGTGGTGTTTCAGGCTACAATCACCATATGATCTTTAGACAGTCAAGTCATTTGAATTTATGTATTATTTTTGGTTTTATGAGTGGGCTCTTACTCCCTCTCATACATCGTTTTTGATCTATTTGTACATAGTACTTTTTTGTATTTTTTTTTAAAAATAATATCTTCAAAATTTGAGAG

mRNA sequence

CAGTGCAGACCTTCTTTTTAGGGTTTAAGCTCTCCTGGTTCAGTCGGTCCTCCCATGGAGGGTTTTAGCAATCCAGCTCTAACCTAATCCCTCTCTTCGACGATGGCGCAGTCCCCCTTCTCTCTCCTCTTCCTTAAGCGTCTTTCCTTCTCTTCTCGATTCTCTAATGCACCTCTTTCTTCGCCCCTCCTTTCTCCTTTCCTCACTATCGGATCATCCAAGCGATTTTTCACCTCCGAAATCTCGTCACCCCCCTCATCACCTTCTTCCAATCCCAAACCCAATTCCCTTTCAGCCCGAATGAGCTTCATCTTCGATCAAATCGACGCCATTGAAAAAGAGCGCTCTCAGAAGGACCAAACTCTGCAGAGAATTCGAGCCTGGCGTGAGTCGAAGGCCAACCAGAATCCGCCCGTCGAGGATGGGCAACTGGAATCGACGTTAGGGAGTGGTAATCTTGCGGATAATGTTAATAATTCGGAGTCTTCTTTGAGAATGGACGAAGAAAATGAGGTGGAAAGGACGGAGAAGAAGAGGAACGAAATTGAATTGGTGCATCCATGGCCGGAGTGGATCGAGTTGATGGAAAGGTTAGTTCATCAGAATTACTTTGATCACAGGAGGAAAGATGAGAACAAGATGGTCGAAGAATTGGGATTCAGTGCCTCTGACCTTGCTTTGGAGGAGGATGTAGGGTTGGACTTGTCCAAGGATTTTAAGGCAGTTTATACTGCGTGTCTGAATTTTGGGAAGGACCGGTTCGACATTCTCAGGTTAATCAACCATATTGGATTTTCGTTTTCATGTGCAGTTAATCCTTGTTTTGGAGATGTGTCGTTGTCAAGAAAAGACATCCAAATTTTGGTTGGTTTTGGGTGCCCAAGTCCAGACAAGAAGGTTGTTTTCTCTGCAAAACTCTTGAGGAAGCTCGTTCATCTTGATGAAGGAGATGTTTGCAGTTCCTGCAGTTTAAGAAATTCTTGTGAAAGAGCATATTTGGTGACTAATAAAGAAGATGAGGCTCGCACAATCGATATTATGCGACTTTTATTTACTTTTGGTTTTGATCACATGAATGGAACTGTTGTCAATGATTCCCTTCTGAAGCGAAAAACGGTTAAAACAGTTGTTCGCAAATTACTTCATGGGGTTGTCAAGTTGGGTTCAGTCCCAATAGATCCTACTCTTTCTCCTCCTGTAATCAAAAGGCCTCCACCAAAAGTGAAGCAGCCCCCACCTCCACCGAAGAAGCGAGTAGGACGTGATGATGTTGAGATGAAAAAAGGGGATTGGCTTTGTCCCAAGTGCGACTTCATGAACTTTGCAAAAAATACGGTGTGCCTGCAGTGTGACGCCAAACGTCCTAAACGGCAGCTGCTACCAGGCGAATGGGAATGCCCAGAATGCAACTTTCTAAACTATAGGAGAAATATGGCATGTTTCCATTGTGAATGCAAGCGGCCAACAGACACATTTTTAGATAATGAAAAGCAAGAAAGTCAGCACGTTCCTTCGAAGTTCGAAAAGATCGCCAATAGGCAAGAGGTCTCTAATGCTTGGAATTTCGACTTCGACGATGATGAGTCAGATGGGGCAGATGTTGCAGCTTTTGAGTATGCAGATTCATCAGTTGCAGCCGAAGGATCTCATGCCGATAATCTGGCGAGAGGAAGCAAATTTAACTCCGATCTCCCGGAAAGACAGCACTCTGATGCTGGAAATAGAGGTCCAGGCGTCGGATTTGACGATTTTGTCGATGAGGAGGACGATATCGACAATTATGAGCTAGATAGCTCAGTGAACAATTCAGGAAGGCAGCCTCATTCGGTTGATTTTTCTGACATTGAAGGGCACTCAGGGTCAGAAGATGGTGATGACTTTGGCCATAGATCTGGTGTCCCATCTTATAATAAGCGTCCAAGACGTCAACAAGCAGCTTTCTCTGATTCTGAGGGCGATGAACTTGATTCTGATGACGATATTTCTGCTAAGAAGAATTGGAAATCTAGTCATCTGACCAGTTCAAGACAGAAAAGTAGAGACAATGGTCGATCGAGGAGGGGATTAAGCTATGGTTCTGATGAAAACCTCGACTCCGACCTCGATGAGGATTTAGATGAAAGACCTCGATCTAGACGGAGTGAAGGAAAGGATTTCGACTCCAATAGGAAGCATTTTCAAACGAGAGGAAGTTCTCGTATGGGCGGTCGATCATCCGAATCAGATTTTGATGATTTTGATAGAGGTATGCGTAGACAAAAATTGAAAGGGAATCAGAGGGAAAATAATCGAAGGGGAAGCGACACTCGAGCTCGTGGAGATAAATACAGTAGAGGAAGTGAGTTTCAGTCTAACAATTTCAGAAATGGTAGAAAGAACACATTTGATGACGATTTTGATGATTTTGGTGACAAGTCCCATCGGTCTCGTGGTAGCAATTCAAGATTTCGTGGGAACAGTCATGGCGGGCGAGGAACATATAGCTCGGGGAGTCCTAAAGAAGGTTACAAGAAAGATCGACCAAGAAGGTATAATGAATACGATACAACCACGGATAAGGATTATGGTGACTTCAAAAACAGTCGACGTGTTATTGAAAGATAGAGCCTATTTGAAGAATAATTCATAATTTGGGTTCGGGCTCGGGTTCGGGTTACTGATTTCATGTTCATCTCACTGCTAACCAAAGATCTATTATGGGATTGCTGCAAAATCAATCCTGTTTTGTTCTGTGGTGTTTCAGGCTACAATCACCATATGATCTTTAGACAGTCAAGTCATTTGAATTTATGTATTATTTTTGGTTTTATGAGTGGGCTCTTACTCCCTCTCATACATCGTTTTTGATCTATTTGTACATAGTACTTTTTTGTATTTTTTTTTAAAAATAATATCTTCAAAATTTGAGAG

Coding sequence (CDS)

ATGGCGCAGTCCCCCTTCTCTCTCCTCTTCCTTAAGCGTCTTTCCTTCTCTTCTCGATTCTCTAATGCACCTCTTTCTTCGCCCCTCCTTTCTCCTTTCCTCACTATCGGATCATCCAAGCGATTTTTCACCTCCGAAATCTCGTCACCCCCCTCATCACCTTCTTCCAATCCCAAACCCAATTCCCTTTCAGCCCGAATGAGCTTCATCTTCGATCAAATCGACGCCATTGAAAAAGAGCGCTCTCAGAAGGACCAAACTCTGCAGAGAATTCGAGCCTGGCGTGAGTCGAAGGCCAACCAGAATCCGCCCGTCGAGGATGGGCAACTGGAATCGACGTTAGGGAGTGGTAATCTTGCGGATAATGTTAATAATTCGGAGTCTTCTTTGAGAATGGACGAAGAAAATGAGGTGGAAAGGACGGAGAAGAAGAGGAACGAAATTGAATTGGTGCATCCATGGCCGGAGTGGATCGAGTTGATGGAAAGGTTAGTTCATCAGAATTACTTTGATCACAGGAGGAAAGATGAGAACAAGATGGTCGAAGAATTGGGATTCAGTGCCTCTGACCTTGCTTTGGAGGAGGATGTAGGGTTGGACTTGTCCAAGGATTTTAAGGCAGTTTATACTGCGTGTCTGAATTTTGGGAAGGACCGGTTCGACATTCTCAGGTTAATCAACCATATTGGATTTTCGTTTTCATGTGCAGTTAATCCTTGTTTTGGAGATGTGTCGTTGTCAAGAAAAGACATCCAAATTTTGGTTGGTTTTGGGTGCCCAAGTCCAGACAAGAAGGTTGTTTTCTCTGCAAAACTCTTGAGGAAGCTCGTTCATCTTGATGAAGGAGATGTTTGCAGTTCCTGCAGTTTAAGAAATTCTTGTGAAAGAGCATATTTGGTGACTAATAAAGAAGATGAGGCTCGCACAATCGATATTATGCGACTTTTATTTACTTTTGGTTTTGATCACATGAATGGAACTGTTGTCAATGATTCCCTTCTGAAGCGAAAAACGGTTAAAACAGTTGTTCGCAAATTACTTCATGGGGTTGTCAAGTTGGGTTCAGTCCCAATAGATCCTACTCTTTCTCCTCCTGTAATCAAAAGGCCTCCACCAAAAGTGAAGCAGCCCCCACCTCCACCGAAGAAGCGAGTAGGACGTGATGATGTTGAGATGAAAAAAGGGGATTGGCTTTGTCCCAAGTGCGACTTCATGAACTTTGCAAAAAATACGGTGTGCCTGCAGTGTGACGCCAAACGTCCTAAACGGCAGCTGCTACCAGGCGAATGGGAATGCCCAGAATGCAACTTTCTAAACTATAGGAGAAATATGGCATGTTTCCATTGTGAATGCAAGCGGCCAACAGACACATTTTTAGATAATGAAAAGCAAGAAAGTCAGCACGTTCCTTCGAAGTTCGAAAAGATCGCCAATAGGCAAGAGGTCTCTAATGCTTGGAATTTCGACTTCGACGATGATGAGTCAGATGGGGCAGATGTTGCAGCTTTTGAGTATGCAGATTCATCAGTTGCAGCCGAAGGATCTCATGCCGATAATCTGGCGAGAGGAAGCAAATTTAACTCCGATCTCCCGGAAAGACAGCACTCTGATGCTGGAAATAGAGGTCCAGGCGTCGGATTTGACGATTTTGTCGATGAGGAGGACGATATCGACAATTATGAGCTAGATAGCTCAGTGAACAATTCAGGAAGGCAGCCTCATTCGGTTGATTTTTCTGACATTGAAGGGCACTCAGGGTCAGAAGATGGTGATGACTTTGGCCATAGATCTGGTGTCCCATCTTATAATAAGCGTCCAAGACGTCAACAAGCAGCTTTCTCTGATTCTGAGGGCGATGAACTTGATTCTGATGACGATATTTCTGCTAAGAAGAATTGGAAATCTAGTCATCTGACCAGTTCAAGACAGAAAAGTAGAGACAATGGTCGATCGAGGAGGGGATTAAGCTATGGTTCTGATGAAAACCTCGACTCCGACCTCGATGAGGATTTAGATGAAAGACCTCGATCTAGACGGAGTGAAGGAAAGGATTTCGACTCCAATAGGAAGCATTTTCAAACGAGAGGAAGTTCTCGTATGGGCGGTCGATCATCCGAATCAGATTTTGATGATTTTGATAGAGGTATGCGTAGACAAAAATTGAAAGGGAATCAGAGGGAAAATAATCGAAGGGGAAGCGACACTCGAGCTCGTGGAGATAAATACAGTAGAGGAAGTGAGTTTCAGTCTAACAATTTCAGAAATGGTAGAAAGAACACATTTGATGACGATTTTGATGATTTTGGTGACAAGTCCCATCGGTCTCGTGGTAGCAATTCAAGATTTCGTGGGAACAGTCATGGCGGGCGAGGAACATATAGCTCGGGGAGTCCTAAAGAAGGTTACAAGAAAGATCGACCAAGAAGGTATAATGAATACGATACAACCACGGATAAGGATTATGGTGACTTCAAAAACAGTCGACGTGTTATTGAAAGATAG

Protein sequence

MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKPNSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLADNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKMVEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPCFGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLVTNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQEVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGNRGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVPSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSDENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQKLKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNSRFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER

Homology

[Close]

BLAST of Cp4.1LG11g09170 vs. ExPASy Swiss-Prot
Match: Q8S9K3 (Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 PE=1 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-30
Identity = 93/332 (28.01%), Postives = 150/332 (45.18%), Query Frame = 0


Query: 155 PEWIELMERLVHQNYFDHRRKDENKMVEELGFSASDLALEEDVGLDLSKDFKAVYTACLN 214
           PEW EL++ L    YF                S S   LE +       +      ACL 
Sbjct: 93  PEWTELLQSLSKAGYFSD--------------SGSISGLESEFFPGFPDELLRPALACLA 152

Query: 215 FGKDRFDILRLINHIGFSFSCAVNPCFGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLR 274
             ++R ++L +                    LSR+D+++LV  G P   K    S K + 
Sbjct: 153 LARERPELLEM--------------------LSRRDVEVLVENGKPFLFKTGPDSLKRM- 212

Query: 275 KLVHLDEGDVCSSCSLRNSCERAYLVTNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLL 334
                       S  LR+  +    + + E +A T+D+MRL+ ++  D  +         
Sbjct: 213 ------------SLYLRSGLQGIGKLMDME-KASTVDLMRLILSYVVDVASSE--ESKQH 272

Query: 335 KRKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKK 394
            ++ +++ VR LL  + K+   P +  +   +  +   +  Q       R  +++VEMK+
Sbjct: 273 NKEIMESSVRSLLSQIAKMSLRPPESNVHDTMQNQYSDRDGQ-----GVRSFQNNVEMKR 332

Query: 395 GDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCECKRP 454
           GDW+C +C  MNFA+N  C QCD  RPKRQL   EWECP+C+F NY RN+AC  C+CKRP
Sbjct: 333 GDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQCDFYNYGRNVACLRCDCKRP 369

Query: 455 TDTFLDNEKQESQHVPSKFEKIANRQEVSNAW 487
            D+ L++   +    P    ++   ++ +  W
Sbjct: 393 RDSSLNSANSDYSSDPELERRLVENEKKAQRW 369

[Close]

BLAST of Cp4.1LG11g09170 vs. NCBI nr
Match: XP_023545347.1 (LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1572 bits (4071), Expect = 0.0
Identity = 813/833 (97.60%), Postives = 813/833 (97.60%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP
Sbjct: 1986 MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 2045

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA
Sbjct: 2046 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 2105

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 2106 DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 2165

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 2166 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 2225

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2226 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2285

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP
Sbjct: 2286 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 2345

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR
Sbjct: 2346 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 2405

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ
Sbjct: 2406 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 2465

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
            EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN
Sbjct: 2466 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 2525

Query: 541  RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
            RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP
Sbjct: 2526 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 2585

Query: 601  SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 660
            SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD
Sbjct: 2586 SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 2645

Query: 661  ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 720
            ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK
Sbjct: 2646 ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 2705

Query: 721  LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS 780
            LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS
Sbjct: 2706 LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS 2765

Query: 781  RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
            RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER
Sbjct: 2766 RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 2798

[Close]

BLAST of Cp4.1LG11g09170 vs. NCBI nr
Match: XP_022946200.1 (DNA polymerase zeta catalytic subunit [Cucurbita moschata])

HSP 1 Score: 1550 bits (4012), Expect = 0.0
Identity = 800/833 (96.04%), Postives = 806/833 (96.76%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLS FLTIGSSKRFFTSE+SS PSSPSSNPKP
Sbjct: 1972 MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKP 2031

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQ ESTLGSGNL 
Sbjct: 2032 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQPESTLGSGNLG 2091

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSES+LRMDEENEVERTEKKR EIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 2092 DNVNNSESALRMDEENEVERTEKKRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 2151

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 2152 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 2211

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2212 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2271

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP
Sbjct: 2272 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 2331

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKN VCLQCDAKR
Sbjct: 2332 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNMVCLQCDAKR 2391

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQE QHVPS+FEK+ANRQ
Sbjct: 2392 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQERQHVPSRFEKVANRQ 2451

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
            EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSK+NSDLPERQHSDAGN
Sbjct: 2452 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKYNSDLPERQHSDAGN 2511

Query: 541  RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
            RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP
Sbjct: 2512 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 2571

Query: 601  SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 660
            SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD
Sbjct: 2572 SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 2631

Query: 661  ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 720
            ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK
Sbjct: 2632 ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 2691

Query: 721  LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS 780
            LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRG+NS
Sbjct: 2692 LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGTNS 2751

Query: 781  RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
            RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER
Sbjct: 2752 RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 2784

[Close]

BLAST of Cp4.1LG11g09170 vs. NCBI nr
Match: KAG7030229.1 (DNA polymerase zeta catalytic subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1541 bits (3991), Expect = 0.0
Identity = 796/833 (95.56%), Postives = 804/833 (96.52%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLS FLTIGSSKRFFTSE+SS PSSPSSNPKP
Sbjct: 1940 MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKP 1999

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQ ESTLGSGNL 
Sbjct: 2000 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQPESTLGSGNLG 2059

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSES+LRMDEENEVER EKKR EIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 2060 DNVNNSESALRMDEENEVERMEKKRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 2119

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 2120 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 2179

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2180 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2239

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLK+KTVKTVVRKLLHGVVKLGSVPIDP
Sbjct: 2240 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKQKTVKTVVRKLLHGVVKLGSVPIDP 2299

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR
Sbjct: 2300 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 2359

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQE QHVPS+FEKIANRQ
Sbjct: 2360 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQERQHVPSRFEKIANRQ 2419

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
            EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSK+NSDLPERQHSDAGN
Sbjct: 2420 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKYNSDLPERQHSDAGN 2479

Query: 541  RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
            RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP
Sbjct: 2480 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 2539

Query: 601  SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 660
            SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKS+HLTSSRQKSRDNGRSRRGLSYGSD
Sbjct: 2540 SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSNHLTSSRQKSRDNGRSRRGLSYGSD 2599

Query: 661  ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 720
            ENLDSDL+EDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK
Sbjct: 2600 ENLDSDLNEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 2659

Query: 721  LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS 780
            LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRG+NS
Sbjct: 2660 LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGTNS 2719

Query: 781  RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
            RFRGNSHGGRGTY SGSPKEGYKKDRPRRYNEYDTT DKDYGDFKNSRRVIER
Sbjct: 2720 RFRGNSHGGRGTYRSGSPKEGYKKDRPRRYNEYDTTADKDYGDFKNSRRVIER 2752

[Close]

BLAST of Cp4.1LG11g09170 vs. NCBI nr
Match: KAG6599223.1 (Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1535 bits (3975), Expect = 0.0
Identity = 795/833 (95.44%), Postives = 803/833 (96.40%), Query Frame = 0


Query: 1   MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
           MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLS FLTIGSSKRFFTSE+SS PSSPSSNPKP
Sbjct: 1   MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKP 60

Query: 61  NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
           NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQ ESTLGSGNL 
Sbjct: 61  NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQPESTLGSGNLG 120

Query: 121 DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
           DNVNNSES+LRMDEENEVER EKKR EIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 121 DNVNNSESALRMDEENEVERMEKKRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180

Query: 181 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
           VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 181 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 240

Query: 241 FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
               SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 241 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300

Query: 301 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
           TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLK+KTVKTVVRKLLHGVVKLGSVPIDP
Sbjct: 301 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKQKTVKTVVRKLLHGVVKLGSVPIDP 360

Query: 361 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
           TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR
Sbjct: 361 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420

Query: 421 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
           PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQE QHVPS+FEKIANRQ
Sbjct: 421 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQERQHVPSRFEKIANRQ 480

Query: 481 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
           EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSK+NSDLPERQHSDAGN
Sbjct: 481 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKYNSDLPERQHSDAGN 540

Query: 541 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
           RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP
Sbjct: 541 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600

Query: 601 SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 660
           SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKS+HLTSSRQ SRDNGRSRRGLSYGSD
Sbjct: 601 SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSNHLTSSRQ-SRDNGRSRRGLSYGSD 660

Query: 661 ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 720
           ENLDSDL+EDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK
Sbjct: 661 ENLDSDLNEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 720

Query: 721 LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS 780
           LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRG+NS
Sbjct: 721 LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGTNS 780

Query: 781 RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
           RFRGNSHGGRGTY SGSPKEGYKKDRPRRYNEYDTT DKDYGDFKNSRRVIER
Sbjct: 781 RFRGNSHGGRGTYRSGSPKEGYKKDRPRRYNEYDTTADKDYGDFKNSRRVIER 812

[Close]

BLAST of Cp4.1LG11g09170 vs. NCBI nr
Match: XP_022999038.1 (DNA polymerase zeta catalytic subunit [Cucurbita maxima])

HSP 1 Score: 1505 bits (3896), Expect = 0.0
Identity = 782/834 (93.76%), Postives = 796/834 (95.44%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            MAQSPFSLL LKRLS SSRFSNAPLSSPLLS FLTIGSSKRFFTSE+SS PSSPSSNPKP
Sbjct: 1976 MAQSPFSLLVLKRLSCSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKP 2035

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDG+ ESTLGSGNL 
Sbjct: 2036 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGRPESTLGSGNLG 2095

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSES+LRMDE NE+ERTEK+R EIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 2096 DNVNNSESALRMDEANEMERTEKQRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 2155

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VEELGF ASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 2156 VEELGFRASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 2215

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2216 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2275

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMRLLFTFGFD M GTVVNDSLLKRKTVKTVVRKLLH VVKLGSVPIDP
Sbjct: 2276 TNKEDEARTIDIMRLLFTFGFDPMKGTVVNDSLLKRKTVKTVVRKLLHEVVKLGSVPIDP 2335

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDA+R
Sbjct: 2336 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAQR 2395

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQE QHVPS+FEKIANRQ
Sbjct: 2396 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQERQHVPSRFEKIANRQ 2455

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAA-EGSHADNLARGSKFNSDLPERQHSDAG 540
            EVSNAWNFDFDDDESDGADVAAFEYADSSVAA EGSHADNLARGSKFNSDLPERQHSDAG
Sbjct: 2456 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAAEGSHADNLARGSKFNSDLPERQHSDAG 2515

Query: 541  NRGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGV 600
            NRGPGVGFDDFVDEEDDIDNYELD+SVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGV
Sbjct: 2516 NRGPGVGFDDFVDEEDDIDNYELDNSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGV 2575

Query: 601  PSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGS 660
            PSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNG+SRRGLSYGS
Sbjct: 2576 PSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGQSRRGLSYGS 2635

Query: 661  DENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQ 720
            DENLDSDLDEDL+ERPRSR+SEGKDFDSNRKHFQ RGSSRMGGRSSESDFDDFDRGMRRQ
Sbjct: 2636 DENLDSDLDEDLNERPRSRQSEGKDFDSNRKHFQRRGSSRMGGRSSESDFDDFDRGMRRQ 2695

Query: 721  KLKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSN 780
            KLKGNQRENNRRGSDTR  GDKYSRGSEFQSNNFRNGRKNTFD++FDDFGDKSHRSRG+N
Sbjct: 2696 KLKGNQRENNRRGSDTRTSGDKYSRGSEFQSNNFRNGRKNTFDENFDDFGDKSHRSRGTN 2755

Query: 781  SRFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
            SRFRGNSHGGRGTYSS SPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER
Sbjct: 2756 SRFRGNSHGGRGTYSSRSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 2789

[Close]

BLAST of Cp4.1LG11g09170 vs. ExPASy TrEMBL
Match: A0A6J1G355 (DNA polymerase zeta catalytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111450356 PE=3 SV=1)

HSP 1 Score: 1550 bits (4012), Expect = 0.0
Identity = 800/833 (96.04%), Postives = 806/833 (96.76%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLS FLTIGSSKRFFTSE+SS PSSPSSNPKP
Sbjct: 1972 MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKP 2031

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQ ESTLGSGNL 
Sbjct: 2032 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQPESTLGSGNLG 2091

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSES+LRMDEENEVERTEKKR EIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 2092 DNVNNSESALRMDEENEVERTEKKRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 2151

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 2152 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 2211

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2212 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2271

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP
Sbjct: 2272 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 2331

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKN VCLQCDAKR
Sbjct: 2332 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNMVCLQCDAKR 2391

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQE QHVPS+FEK+ANRQ
Sbjct: 2392 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQERQHVPSRFEKVANRQ 2451

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
            EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSK+NSDLPERQHSDAGN
Sbjct: 2452 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKYNSDLPERQHSDAGN 2511

Query: 541  RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
            RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP
Sbjct: 2512 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 2571

Query: 601  SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 660
            SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD
Sbjct: 2572 SYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGSD 2631

Query: 661  ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 720
            ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK
Sbjct: 2632 ENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQK 2691

Query: 721  LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNS 780
            LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRG+NS
Sbjct: 2692 LKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGTNS 2751

Query: 781  RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
            RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER
Sbjct: 2752 RFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 2784

[Close]

BLAST of Cp4.1LG11g09170 vs. ExPASy TrEMBL
Match: A0A6J1KIG8 (DNA polymerase zeta catalytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111493549 PE=3 SV=1)

HSP 1 Score: 1505 bits (3896), Expect = 0.0
Identity = 782/834 (93.76%), Postives = 796/834 (95.44%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            MAQSPFSLL LKRLS SSRFSNAPLSSPLLS FLTIGSSKRFFTSE+SS PSSPSSNPKP
Sbjct: 1976 MAQSPFSLLVLKRLSCSSRFSNAPLSSPLLSHFLTIGSSKRFFTSEVSSTPSSPSSNPKP 2035

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDG+ ESTLGSGNL 
Sbjct: 2036 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGRPESTLGSGNLG 2095

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSES+LRMDE NE+ERTEK+R EIELVHPWPEWIELMERLVHQNYFDHRRKDENKM
Sbjct: 2096 DNVNNSESALRMDEANEMERTEKQRKEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 2155

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VEELGF ASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR                
Sbjct: 2156 VEELGFRASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILR---------------- 2215

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2216 ----SLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2275

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMRLLFTFGFD M GTVVNDSLLKRKTVKTVVRKLLH VVKLGSVPIDP
Sbjct: 2276 TNKEDEARTIDIMRLLFTFGFDPMKGTVVNDSLLKRKTVKTVVRKLLHEVVKLGSVPIDP 2335

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDA+R
Sbjct: 2336 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAQR 2395

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQE QHVPS+FEKIANRQ
Sbjct: 2396 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQERQHVPSRFEKIANRQ 2455

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAA-EGSHADNLARGSKFNSDLPERQHSDAG 540
            EVSNAWNFDFDDDESDGADVAAFEYADSSVAA EGSHADNLARGSKFNSDLPERQHSDAG
Sbjct: 2456 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAAEGSHADNLARGSKFNSDLPERQHSDAG 2515

Query: 541  NRGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGV 600
            NRGPGVGFDDFVDEEDDIDNYELD+SVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGV
Sbjct: 2516 NRGPGVGFDDFVDEEDDIDNYELDNSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGV 2575

Query: 601  PSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGRSRRGLSYGS 660
            PSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNG+SRRGLSYGS
Sbjct: 2576 PSYNKRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRDNGQSRRGLSYGS 2635

Query: 661  DENLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSSESDFDDFDRGMRRQ 720
            DENLDSDLDEDL+ERPRSR+SEGKDFDSNRKHFQ RGSSRMGGRSSESDFDDFDRGMRRQ
Sbjct: 2636 DENLDSDLDEDLNERPRSRQSEGKDFDSNRKHFQRRGSSRMGGRSSESDFDDFDRGMRRQ 2695

Query: 721  KLKGNQRENNRRGSDTRARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSN 780
            KLKGNQRENNRRGSDTR  GDKYSRGSEFQSNNFRNGRKNTFD++FDDFGDKSHRSRG+N
Sbjct: 2696 KLKGNQRENNRRGSDTRTSGDKYSRGSEFQSNNFRNGRKNTFDENFDDFGDKSHRSRGTN 2755

Query: 781  SRFRGNSHGGRGTYSSGSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 833
            SRFRGNSHGGRGTYSS SPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER
Sbjct: 2756 SRFRGNSHGGRGTYSSRSPKEGYKKDRPRRYNEYDTTTDKDYGDFKNSRRVIER 2789

[Close]

BLAST of Cp4.1LG11g09170 vs. ExPASy TrEMBL
Match: A0A1S3BYM1 (DNA polymerase zeta catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103494814 PE=3 SV=1)

HSP 1 Score: 1220 bits (3156), Expect = 0.0
Identity = 668/885 (75.48%), Postives = 720/885 (81.36%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            M  SPFSLLFLKRL FSS+ SNAPLSSPLLS  L IG+SKRFFTS+ISS PS PSS+PKP
Sbjct: 1247 MTYSPFSLLFLKRLPFSSKTSNAPLSSPLLSHLLAIGTSKRFFTSQISSTPSPPSSDPKP 1306

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWR+SK  QNPP              L 
Sbjct: 1307 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRQSKTTQNPP--------------LG 1366

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSE +L +DE +EVE  EKK+NEIELVHPW EWIELMERLV QNYFDH+R++E KM
Sbjct: 1367 DNVNNSEPALEIDEGHEVEIVEKKKNEIELVHPWREWIELMERLVQQNYFDHKRRNEGKM 1426

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VE++GFSASD+ALEEDVGLDLSKDF AVYTACLNFGKDRFDI+R                
Sbjct: 1427 VEKMGFSASDVALEEDVGLDLSKDFTAVYTACLNFGKDRFDIMR---------------- 1486

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLS+KDIQ+LVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 1487 ----SLSKKDIQMLVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 1546

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMR+LFTFGFDHMNGTVVNDSLLKRKTVK VVRKLLH VVKLGSVPIDP
Sbjct: 1547 TNKEDEARTIDIMRVLFTFGFDHMNGTVVNDSLLKRKTVKAVVRKLLHQVVKLGSVPIDP 1606

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TL+PPVIK+PPPKVK+PPPPP++RVGRDDVEMKKGDWLC KCDF+NFAKNT CLQCDAKR
Sbjct: 1607 TLTPPVIKKPPPKVKKPPPPPRRRVGRDDVEMKKGDWLCSKCDFLNFAKNTACLQCDAKR 1666

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECP+CNFLNYRRNMACFHCECKRP +TFLDNE+QE  H PSKFEKIANRQ
Sbjct: 1667 PKRQLLPGEWECPQCNFLNYRRNMACFHCECKRPAETFLDNEEQEKPHAPSKFEKIANRQ 1726

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
            EVSNAWNFDFDDDESDGADVAAFE+ADSS+AAEGS +D  ARGSK   DLPERQHSDAGN
Sbjct: 1727 EVSNAWNFDFDDDESDGADVAAFEHADSSIAAEGSRSDFQARGSKLGWDLPERQHSDAGN 1786

Query: 541  RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
            RGPGVGFDDFVDEEDDID+YELDSS  NS  + HSV+FSDIE  SGSEDG++  HR GV 
Sbjct: 1787 RGPGVGFDDFVDEEDDIDSYELDSS--NSASKLHSVNFSDIERDSGSEDGNE-DHRPGVR 1846

Query: 601  SYNKRPRRQQAAFSDSEGDELD--SDDDISAKKNWKSSHLTSSRQKSRDNG---RSRRGL 660
            +YNKRP RQQA FS SE DELD  SDD+IS K+NWKSSH+   RQKSRD G   RSRRGL
Sbjct: 1847 AYNKRPARQQAGFSGSEDDELDFVSDDNISVKENWKSSHVAGPRQKSRDRGLTGRSRRGL 1906

Query: 661  SYGSDEN--LDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRM-GGRSSESDFDDF 720
            SYGSDE   LDSDLDED+DE PRSR S+GKDFDS RK FQ RGSSRM  G SS SDFDDF
Sbjct: 1907 SYGSDEEFGLDSDLDEDVDEGPRSRLSKGKDFDSGRKLFQRRGSSRMESGLSSGSDFDDF 1966

Query: 721  DRGMRRQKLKGNQREN-------------------------------------NRRGSDT 780
            DRGM RQKL+GNQREN                                     NRRGSD 
Sbjct: 1967 DRGMHRQKLRGNQRENHRWESDQRSRGDKFTKGSGFQSSNFRNDRKNTFQRENNRRGSDH 2026

Query: 781  RARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNSRFRGNSHGGRGTYSS 833
            RARGDK+++GSEFQSNNFRNGRKNTFDDDFDDF DK HRSRG+NS+F GN+HGGRGTY  
Sbjct: 2027 RARGDKFTKGSEFQSNNFRNGRKNTFDDDFDDFDDKPHRSRGANSKFHGNNHGGRGTYGP 2086

[Close]

BLAST of Cp4.1LG11g09170 vs. ExPASy TrEMBL
Match: A0A5A7U379 (DNA polymerase zeta catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00790 PE=3 SV=1)

HSP 1 Score: 1219 bits (3154), Expect = 0.0
Identity = 668/885 (75.48%), Postives = 720/885 (81.36%), Query Frame = 0


Query: 1    MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
            M  SPFSLLFLKRL FSS+ SNAPLSSPLLS  L IG+SKRFFTS+ISS PS PSS+PKP
Sbjct: 1972 MTYSPFSLLFLKRLPFSSKTSNAPLSSPLLSHLLAIGTSKRFFTSQISSTPSPPSSDPKP 2031

Query: 61   NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
            NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWR+SK  QNPP              L 
Sbjct: 2032 NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRQSKTTQNPP--------------LG 2091

Query: 121  DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
            DNVNNSE +L +DE +EVE  EKK+NEIELVHPW EWIELMERLV QNYFDH+RK+E KM
Sbjct: 2092 DNVNNSEPALEIDEGHEVEIVEKKKNEIELVHPWREWIELMERLVQQNYFDHKRKNEGKM 2151

Query: 181  VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
            VE++GFSASD+ALEEDVGLDLSKDF AVYTACLNFGKDRFDI+R                
Sbjct: 2152 VEKMGFSASDVALEEDVGLDLSKDFTAVYTACLNFGKDRFDIMR---------------- 2211

Query: 241  FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
                SLS+KDIQ+LVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 2212 ----SLSKKDIQMLVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 2271

Query: 301  TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
            TNKEDEARTIDIMR+LFTFGFDHMNGTVVNDSLLKRKTVK VVRKLLH VVKLGSVPIDP
Sbjct: 2272 TNKEDEARTIDIMRVLFTFGFDHMNGTVVNDSLLKRKTVKAVVRKLLHQVVKLGSVPIDP 2331

Query: 361  TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
            TL+PPVIK+PPPKVK+PPPPP++RVGRDDVEMKKGDWLC KCDF+NFAKNT CLQCDAKR
Sbjct: 2332 TLTPPVIKKPPPKVKKPPPPPRRRVGRDDVEMKKGDWLCSKCDFLNFAKNTACLQCDAKR 2391

Query: 421  PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
            PKRQLLPGEWECP+CNFLNYRRNMACFHCECKRP +TFLDNE+QE  H PSKFEKIANRQ
Sbjct: 2392 PKRQLLPGEWECPQCNFLNYRRNMACFHCECKRPAETFLDNEEQEKPHAPSKFEKIANRQ 2451

Query: 481  EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
            EVSNAWNFDFDDDESDGADVAAFE+ADSS+AAEGS +D  ARGSK   DLPERQHSDAGN
Sbjct: 2452 EVSNAWNFDFDDDESDGADVAAFEHADSSIAAEGSRSDFQARGSKLGWDLPERQHSDAGN 2511

Query: 541  RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
            RGPGVGFDDFVDEEDDID+YELDSS  NS  + HSV+FSDIE  SGSEDG++  HR GV 
Sbjct: 2512 RGPGVGFDDFVDEEDDIDSYELDSS--NSASKLHSVNFSDIERDSGSEDGNE-DHRPGVR 2571

Query: 601  SYNKRPRRQQAAFSDSEGDELD--SDDDISAKKNWKSSHLTSSRQKSRDNG---RSRRGL 660
            +YNKRP RQQA FS SE DELD  SDD+IS K+NWKSSH+   RQKSRD G   RSRRGL
Sbjct: 2572 AYNKRPARQQAGFSGSEDDELDFVSDDNISVKENWKSSHVAGPRQKSRDRGLTGRSRRGL 2631

Query: 661  SYGSDE--NLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRM-GGRSSESDFDDF 720
            SYGSDE   LDSDLDED+DE P+SR S+GKDFDS RK FQ RGSSRM  G SS SDFDDF
Sbjct: 2632 SYGSDEAFGLDSDLDEDVDEGPQSRFSKGKDFDSGRKLFQRRGSSRMESGLSSGSDFDDF 2691

Query: 721  DRGMRRQKLKGNQREN-------------------------------------NRRGSDT 780
            DRGM RQKL+GNQREN                                     NRRGSD 
Sbjct: 2692 DRGMHRQKLRGNQRENHRWESDQRSRGDKFTKGSGFQSSNFRNDRKNTFQRENNRRGSDH 2751

Query: 781  RARGDKYSRGSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNSRFRGNSHGGRGTYSS 833
            RARGDK+++GSEFQSNNFRNGRKNTFDDDFDDF DK HRSRG+NS+F GN+HGGRGTY  
Sbjct: 2752 RARGDKFTKGSEFQSNNFRNGRKNTFDDDFDDFDDKPHRSRGANSKFHGNNHGGRGTYGP 2811

[Close]

BLAST of Cp4.1LG11g09170 vs. ExPASy TrEMBL
Match: A0A0A0LIS7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030000 PE=4 SV=1)

HSP 1 Score: 1206 bits (3119), Expect = 0.0
Identity = 662/876 (75.57%), Postives = 712/876 (81.28%), Query Frame = 0


Query: 1   MAQSPFSLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKP 60
           M  SPFSLLFLKRL FSS+ SNAPLSSPLLS  L IG+SKRFFTS+ISS PS PSS+PKP
Sbjct: 1   MTYSPFSLLFLKRLPFSSKTSNAPLSSPLLSHLLAIGTSKRFFTSQISSTPSPPSSDPKP 60

Query: 61  NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKANQNPPVEDGQLESTLGSGNLA 120
           NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESK  QNPP              L 
Sbjct: 61  NSLSARMSFIFDQIDAIEKERSQKDQTLQRIRAWRESKTTQNPP--------------LG 120

Query: 121 DNVNNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRRKDENKM 180
           DNVNNSE +L +DE  +VE  EKK+NEIELVHPW EWIELMERLV QNYFDHRRK+E KM
Sbjct: 121 DNVNNSEPALEVDEGRKVEIVEKKKNEIELVHPWREWIELMERLVQQNYFDHRRKNEGKM 180

Query: 181 VEELGFSASDLALEEDVGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 240
           VE +GFSASD+ALEEDVGLDLSKDF AVYTACLNFGKDRFDI+R                
Sbjct: 181 VERMGFSASDIALEEDVGLDLSKDFTAVYTACLNFGKDRFDIMR---------------- 240

Query: 241 FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300
               SLS+KDIQ+LVGFGCPSPDKK+VFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV
Sbjct: 241 ----SLSKKDIQMLVGFGCPSPDKKIVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 300

Query: 301 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 360
           TNKEDEARTIDIMR+LFT+GFDHMNGTVVNDSLLKRKTVK VVRKLLH VV+LGSVPIDP
Sbjct: 301 TNKEDEARTIDIMRVLFTYGFDHMNGTVVNDSLLKRKTVKAVVRKLLHQVVRLGSVPIDP 360

Query: 361 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 420
           TL+PPV+K+PPPKVK+PPPP ++RVGRDDVEMKKGDWLCPKCDFMNFAKN+VCLQCDA R
Sbjct: 361 TLTPPVMKKPPPKVKKPPPPQRRRVGRDDVEMKKGDWLCPKCDFMNFAKNSVCLQCDANR 420

Query: 421 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFEKIANRQ 480
           PKRQLLPGEWECPECNFLNYRRNMACFHCECKRP +TFLDNE+QE  H PSKFEKIANRQ
Sbjct: 421 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPAETFLDNEEQEKPHDPSKFEKIANRQ 480

Query: 481 EVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLPERQHSDAGN 540
           EVSNAWNFDFDDDESDGADVAAFEYADSS+AAEGS +D  ARGS+   DLPERQHSDAGN
Sbjct: 481 EVSNAWNFDFDDDESDGADVAAFEYADSSIAAEGSRSDIQARGSRIGWDLPERQHSDAGN 540

Query: 541 RGPGVGFDDFVDEEDDIDNYELDSSVNNSGRQPHSVDFSDIEGHSGSEDGDDFGHRSGVP 600
           RGPGVGFDDFVDEEDDID+YELDSS NNS  Q HSV+FSDIE  SGSEDG++  HR GV 
Sbjct: 541 RGPGVGFDDFVDEEDDIDSYELDSSANNSASQLHSVNFSDIERDSGSEDGNE-DHRPGVR 600

Query: 601 SYNKRPRRQQAAFSDSEGDELD--SDDDISAKKNWKSSHLTSSRQKSRDNG---RSRRGL 660
           +YNKRP RQQA FS SE DELD  SDDD S    WKSSH+   RQKSRD G   RSRRGL
Sbjct: 601 AYNKRPARQQARFSGSEDDELDFVSDDDTSV---WKSSHVAGPRQKSRDKGLTGRSRRGL 660

Query: 661 SYGSDEN--LDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMG-GRSSESDFDDF 720
           SYGSDE   LDSDLDED+DE PR+R S+GKDFDS RK FQ RGSSRM  G SS SDFDDF
Sbjct: 661 SYGSDEEFGLDSDLDEDVDEGPRARSSKGKDFDSGRKQFQRRGSSRMERGLSSGSDFDDF 720

Query: 721 DRGMRRQKLKGNQRENNRRGSDTRARG----------------------------DKYSR 780
           DRGMRRQ+L+GNQRENNRR S+ RARG                             K+++
Sbjct: 721 DRGMRRQELRGNQRENNRRESNQRARGFQSNNLRNDRKNTFQRENNRRGSDHPARGKFTK 780

Query: 781 GSEFQSNNFRNGRKNTFDDDFDDFGDKSHRSRGSNSRFRGNSHGGRGTYSSGSPK----- 833
           GSEFQSNNFRNGRKNTF DDFDD   K HRSR +NSRF GN+HGGRGTY S + K     
Sbjct: 781 GSEFQSNNFRNGRKNTFHDDFDD---KPHRSRSANSRFHGNNHGGRGTYGSEADKPDFRG 835

[Close]

BLAST of Cp4.1LG11g09170 vs. TAIR 10
Match: AT1G55040.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 676.8 bits (1745), Expect = 2.2e-194
Identity = 444/895 (49.61%), Postives = 551/895 (61.56%), Query Frame = 0


Query: 7   SLLFLKRLSFSSRFSNAPLSSPLLSPFLTIGSSKRFFTSEISSPPSSPSSNPKPNSLSAR 66
           SLL +KR+   S     P S  L  PFLT    K   TS  S+  S+   N KP+SLS+R
Sbjct: 6   SLLLIKRI---SHLHINPKSHRLFQPFLT----KSLSTSPQSNTESTHEPNHKPSSLSSR 65

Query: 67  MSFIFDQIDAIEKERSQKDQTLQRIRAWRESKAN---QNPPVEDGQLESTLGSGNLADNV 126
           +SF+FDQIDAIEK  S+KD+TL+RIRAWR+SK     + PP    Q        ++  N 
Sbjct: 66  LSFVFDQIDAIEKRHSEKDETLERIRAWRQSKQTHQLKTPPSAPQQDPDLREVESVVSND 125

Query: 127 NNSESSLRMDEENEVERTEKKRNEIELVHPWPEWIELMERLVHQNYFDHRR-KDENKMVE 186
                 +    + +     K++  IELVHPWPEW+ELMERLV QNYFDHRR +D++ MV 
Sbjct: 126 KLDSCVVLEPIQIDSGELSKEKGVIELVHPWPEWMELMERLVKQNYFDHRRERDDDDMVN 185

Query: 187 ELGFSASDLALEED--VGLDLSKDFKAVYTACLNFGKDRFDILRLINHIGFSFSCAVNPC 246
            LG   S + L ED  VG+ L +DF+AV  AC NFGKDRFDILR                
Sbjct: 186 SLGIDVSSVGLGEDENVGVALFQDFRAVQNACSNFGKDRFDILR---------------- 245

Query: 247 FGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLRKLVHLDEGDVCSSCSLRNSCERAYLV 306
               SLSR DIQILVG GCP+ D+KVVFS KLLRK VHLDEGDVCSSCSLRNSCE+A+L+
Sbjct: 246 ----SLSRNDIQILVGHGCPATDRKVVFSGKLLRKRVHLDEGDVCSSCSLRNSCEKAFLL 305

Query: 307 TNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLLKRKTVKTVVRKLLHGVVKLGSVPIDP 366
           TNKEDEARTID+MR+LFT+GFD +NGTV N SLLK+K+VK+VVRKLLH +VKL +VPIDP
Sbjct: 306 TNKEDEARTIDLMRILFTYGFDPLNGTVANKSLLKKKSVKSVVRKLLHEIVKLSAVPIDP 365

Query: 367 TLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKR 426
            L+PPVIKR PPKVKQPPP PK+RVGRDDVEMKKGDWLCPKCDFMNFAKNT+CLQCDAKR
Sbjct: 366 NLTPPVIKRAPPKVKQPPPTPKRRVGRDDVEMKKGDWLCPKCDFMNFAKNTICLQCDAKR 425

Query: 427 PKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQES-QHVPSKFEKIANR 486
           PKRQLLPGEWECPECNFLNYRRNMACFHC+CKRP D  L+N+ QE+ +   ++ +++  R
Sbjct: 426 PKRQLLPGEWECPECNFLNYRRNMACFHCDCKRPADAILENKPQETYRFTEAQTDRVVKR 485

Query: 487 QEVSNAWNFDFDDDESDGADVAAFEYADSSVAAEGSHADNLARGSKFNSDLP--ERQHSD 546
            +VSNAWNFDFDDDESDGA+VAAFEYADSS   E    + L    +   +LP   R+ S+
Sbjct: 486 DDVSNAWNFDFDDDESDGAEVAAFEYADSSKKNENLLREGLRDPEEEFGNLPPGARESSE 545

Query: 547 AG-NRGPGVGFDDFVDEEDDIDNYELDSS------VNNSGRQPHSVDFSDIEGHSGSEDG 606
            G +R PGVGFDDF D+EDDID+YE+D S      V  +     S +FS+ E    S+ G
Sbjct: 546 FGRSRRPGVGFDDF-DDEDDIDSYEIDESKERDVPVEGARSSFASDEFSEDEKFPESKSG 605

Query: 607 DDFGHRSGVPSYN---KRPRRQQAAFSDSEGDELDSDDDISAKKNWKSSHLTSSRQKSRD 666
            +  HR G  +++   K+    +  FS  +     SDD++SA   WKSSH+ S+++    
Sbjct: 606 FN-AHRGGSSNFHNSGKKHGNSKGGFSRDDELGFSSDDEVSANPRWKSSHVASTQR---- 665

Query: 667 NGRSRRGLSYGSDE--NLDSDLDEDLDERPRSRRSEGKDFDSNRKHFQTRGSSRMGGRSS 726
            G   R L++GSDE   LDSD++   D+ PRS    G+  +  R  F+ + SS      S
Sbjct: 666 -GPPSRKLTFGSDEEFGLDSDME---DDSPRSGLRRGQRNNGARGGFKGKRSS-YSASES 725

Query: 727 ESDFDDFD------RGMRRQKLKGNQRENNRRGSDTRARGDKY--SRGSEFQSNNFRNG- 786
           + D DD +       G R +  +G  R   R G +     D Y  S GS    +  R G 
Sbjct: 726 DDDMDDQEYRGSSFSGNRSRGSRGRMRGGGRGGFNDNFASDSYRGSNGSSANRSRGRGGR 785

Query: 787 ---RKNTFDDD----------------------------------FDD-FGDKSHRSRGS 834
              R+++FD D                                  FDD F  KS R RGS
Sbjct: 786 IGSRRSSFDSDDEDYRGSSSSASRSRGNREDSGGVGGRMGSRRGGFDDEFDRKSSRGRGS 845

[Close]

BLAST of Cp4.1LG11g09170 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-53
Identity = 128/375 (34.13%), Postives = 183/375 (48.80%), Query Frame = 0


Query: 152 HPWPEWIELMERLVHQNYFDHRRKDENKMVEELGFSASDLALEEDVGLDLSKDFKAVYTA 211
           HPWPEW++LM  L  + YF+                      E  + L  SK+   + TA
Sbjct: 44  HPWPEWLDLMGMLAKKGYFE----------------------ESLIPLMSSKESNHIRTA 103

Query: 212 CLNFGKDRFDILRLINHIGFSFSCAVNPCFGDVSLSRKDIQILVGFGCPSPDKKVVFSAK 271
           CLNF + RF ++R                    +LS+KDI+++ G GCPS D+KVV S K
Sbjct: 104 CLNFARHRFTLVR--------------------NLSKKDIKVIAGCGCPSTDRKVVNSGK 163

Query: 272 LLRKLVHLDEGDVCSSCSLRNSCERAYLVTNKEDEARTIDIMRLLFTFGFDHMNGTVVND 331
            LR  V +DEG+VC SC+LR  CERAY     ++ ARTID+MRLL T+G D ++ TV N 
Sbjct: 164 RLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTIDVMRLLLTYGLDSISPTVENR 223

Query: 332 SLLKRKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIKRPPPKVKQ-PPPPPKKRVG---- 391
           +  + K V+  VRKLL   V       +   +        P  +      P+KR G    
Sbjct: 224 A-CQTKLVEDSVRKLLRESVAYSLTDFESAETETAGDELQPNSQDIDERDPRKRPGDWYC 283

Query: 392 --------------------------------RDDVEMKKGDWLCPKCDFMNFAKNTVCL 451
                                           +D + +KKGDW+C  C+F+NF+KNT CL
Sbjct: 284 TECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQTCNFLNFSKNTRCL 343

Query: 452 QCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFE 489
           +C  K   RQ+ PGEWEC  CN++N+RRN  C  C          D+++Q++ +V    +
Sbjct: 344 RCKDKPTLRQINPGEWECESCNYINFRRNSICLKC----------DHKRQKAANVTPDSK 365

[Close]

BLAST of Cp4.1LG11g09170 vs. TAIR 10
Match: AT1G70650.2 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-53
Identity = 128/375 (34.13%), Postives = 183/375 (48.80%), Query Frame = 0


Query: 152 HPWPEWIELMERLVHQNYFDHRRKDENKMVEELGFSASDLALEEDVGLDLSKDFKAVYTA 211
           HPWPEW++LM  L  + YF+                      E  + L  SK+   + TA
Sbjct: 44  HPWPEWLDLMGMLAKKGYFE----------------------ESLIPLMSSKESNHIRTA 103

Query: 212 CLNFGKDRFDILRLINHIGFSFSCAVNPCFGDVSLSRKDIQILVGFGCPSPDKKVVFSAK 271
           CLNF + RF ++R                    +LS+KDI+++ G GCPS D+KVV S K
Sbjct: 104 CLNFARHRFTLVR--------------------NLSKKDIKVIAGCGCPSTDRKVVNSGK 163

Query: 272 LLRKLVHLDEGDVCSSCSLRNSCERAYLVTNKEDEARTIDIMRLLFTFGFDHMNGTVVND 331
            LR  V +DEG+VC SC+LR  CERAY     ++ ARTID+MRLL T+G D ++ TV N 
Sbjct: 164 RLRAYVGIDEGNVCGSCNLRGKCERAYAQARDDEGARTIDVMRLLLTYGLDSISPTVENR 223

Query: 332 SLLKRKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIKRPPPKVKQ-PPPPPKKRVG---- 391
           +  + K V+  VRKLL   V       +   +        P  +      P+KR G    
Sbjct: 224 A-CQTKLVEDSVRKLLRESVAYSLTDFESAETETAGDELQPNSQDIDERDPRKRPGDWYC 283

Query: 392 --------------------------------RDDVEMKKGDWLCPKCDFMNFAKNTVCL 451
                                           +D + +KKGDW+C  C+F+NF+KNT CL
Sbjct: 284 TECKFLNFAKNIRCLRCDVFSEERLKQLKEEQKDHLPLKKGDWICQTCNFLNFSKNTRCL 343

Query: 452 QCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCECKRPTDTFLDNEKQESQHVPSKFE 489
           +C  K   RQ+ PGEWEC  CN++N+RRN  C  C          D+++Q++ +V    +
Sbjct: 344 RCKDKPTLRQINPGEWECESCNYINFRRNSICLKC----------DHKRQKAANVTPDSK 365

[Close]

BLAST of Cp4.1LG11g09170 vs. TAIR 10
Match: AT1G48570.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 168.7 bits (426), Expect = 2.0e-41
Identity = 116/357 (32.49%), Postives = 168/357 (47.06%), Query Frame = 0


Query: 152 HPWPEWIELMERLVHQNYFDHRRKDENKMVEELGFSASDLALEEDVGLDLSKDFKAVYTA 211
           HPWPEWI  ++RL  + YF    +D+    E +                L KD      A
Sbjct: 60  HPWPEWITFVDRLKTKGYFTKDTEDDTVYQEMI----------------LVKD------A 119

Query: 212 CLNFGKDRFDILRLINHIGFSFSCAVNPCFGDVSLSRKDIQILVGFGCPSPDKKVVFSAK 271
           CL+F +DR+D+LR                    SLS  D+Q LV  GCP+  +K V S+K
Sbjct: 120 CLSFARDRYDVLR--------------------SLSSGDVQALVERGCPNLFRKTVNSSK 179

Query: 272 LLRKLVHLDEGDVCSSCSLRNSCERAYLV-TNKEDEARTIDIMRLLFTFGFDHMNGTVVN 331
            +R  V L+EGDVC SC LR+SC+RAY++  + E +ART+D+MRLL    F+ ++  V++
Sbjct: 180 RIRAHVKLNEGDVCGSCDLRSSCDRAYVILKDTEADARTVDVMRLLL---FNALDSIVIS 239

Query: 332 DSLLK--RKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIK----------------RPPP 391
              +   ++ V    R+LL  +V+    P+ P L  P  K                 P  
Sbjct: 240 RGEVPPGKELVHESARRLLLELVEFSEKPLIPALPKPSSKESSLPSKERAFKSRNDEPSQ 299

Query: 392 KV--KQPPPPPKKRV----------------------GRDDVEMKKGDWLCPKCDFMNFA 451
           +V  K     P +RV                       + D  +   DW CPKCDF+NFA
Sbjct: 300 RVAFKSRNDDPSQRVAFKSRNDEPSHRVAFKSRNDESSQRDRPLYSADWACPKCDFVNFA 359

Query: 452 KNTVCLQCDAKRPKRQLL----PGEWECPECNFLNYRRNMACFHCECKRPTDTFLDN 462
           +N  C +C+    +R +      G+W CPEC+FLN+ RN +C  C+ K P  T + N
Sbjct: 360 RNERCRECNEVADRRPVAAVVKEGDWLCPECSFLNFTRNQSCLKCKAKGPKKTSMVN 371

[Close]

BLAST of Cp4.1LG11g09170 vs. TAIR 10
Match: AT5G17790.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 136.7 bits (343), Expect = 8.3e-32
Identity = 93/332 (28.01%), Postives = 150/332 (45.18%), Query Frame = 0


Query: 155 PEWIELMERLVHQNYFDHRRKDENKMVEELGFSASDLALEEDVGLDLSKDFKAVYTACLN 214
           PEW EL++ L    YF                S S   LE +       +      ACL 
Sbjct: 93  PEWTELLQSLSKAGYFSD--------------SGSISGLESEFFPGFPDELLRPALACLA 152

Query: 215 FGKDRFDILRLINHIGFSFSCAVNPCFGDVSLSRKDIQILVGFGCPSPDKKVVFSAKLLR 274
             ++R ++L +                    LSR+D+++LV  G P   K    S K + 
Sbjct: 153 LARERPELLEM--------------------LSRRDVEVLVENGKPFLFKTGPDSLKRM- 212

Query: 275 KLVHLDEGDVCSSCSLRNSCERAYLVTNKEDEARTIDIMRLLFTFGFDHMNGTVVNDSLL 334
                       S  LR+  +    + + E +A T+D+MRL+ ++  D  +         
Sbjct: 213 ------------SLYLRSGLQGIGKLMDME-KASTVDLMRLILSYVVDVASSE--ESKQH 272

Query: 335 KRKTVKTVVRKLLHGVVKLGSVPIDPTLSPPVIKRPPPKVKQPPPPPKKRVGRDDVEMKK 394
            ++ +++ VR LL  + K+   P +  +   +  +   +  Q       R  +++VEMK+
Sbjct: 273 NKEIMESSVRSLLSQIAKMSLRPPESNVHDTMQNQYSDRDGQ-----GVRSFQNNVEMKR 332

Query: 395 GDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMACFHCECKRP 454
           GDW+C +C  MNFA+N  C QCD  RPKRQL   EWECP+C+F NY RN+AC  C+CKRP
Sbjct: 333 GDWICSRCSGMNFARNVKCFQCDEARPKRQLTGSEWECPQCDFYNYGRNVACLRCDCKRP 369

Query: 455 TDTFLDNEKQESQHVPSKFEKIANRQEVSNAW 487
            D+ L++   +    P    ++   ++ +  W
Sbjct: 393 RDSSLNSANSDYSSDPELERRLVENEKKAQRW 369

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S9K3	1.2e-30	28.01	Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VAR3 ...	[more]

BLAST of Cp4.1LG11g09170 vs. NCBI nr


Match Name	Identity	Description
XP_023545347.1	97.60	LOW QUALITY PROTEIN: DNA polymerase zeta catalytic subunit [Cucurbita pepo subsp...	[more]
XP_022946200.1	96.04	DNA polymerase zeta catalytic subunit [Cucurbita moschata]	[more]
KAG7030229.1	95.56	DNA polymerase zeta catalytic subunit [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAG6599223.1	95.44	Zinc finger protein VAR3, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022999038.1	93.76	DNA polymerase zeta catalytic subunit [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g09170 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1G355	96.04	DNA polymerase zeta catalytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111450...	[more]
A0A6J1KIG8	93.76	DNA polymerase zeta catalytic subunit OS=Cucurbita maxima OX=3661 GN=LOC11149354...	[more]
A0A1S3BYM1	75.48	DNA polymerase zeta catalytic subunit OS=Cucumis melo OX=3656 GN=LOC103494814 PE...	[more]
A0A5A7U379	75.48	DNA polymerase zeta catalytic subunit OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LIS7	75.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G030000 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g09170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55040.1	2.2e-194	49.61	zinc finger (Ran-binding) family protein	[more]
AT1G70650.1	1.3e-53	34.13	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G70650.2	1.3e-53	34.13	Ran BP2/NZF zinc finger-like superfamily protein	[more]
AT1G48570.1	2.0e-41	32.49	zinc finger (Ran-binding) family protein	[more]
AT5G17790.1	8.3e-32	28.01	zinc finger (Ran-binding) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..151
None	No IPR available	GENE3D	4.10.1060.10		coord: 385..423 e-value: 8.6E-17 score: 62.1 coord: 424..457 e-value: 7.3E-8 score: 33.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..389
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 779..793
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 799..833
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 512..833
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 640..659
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 704..743
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 757..777
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 669..693
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..379
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 577..595
None	No IPR available	PANTHER	PTHR23111:SF29	ZINC FINGER (RAN-BINDING) FAMILY PROTEIN	coord: 3..711
None	No IPR available	PANTHER	PTHR23111	ZINC FINGER PROTEIN	coord: 3..711
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 395..419 e-value: 2.6E-6 score: 37.0 coord: 428..452 e-value: 0.053 score: 22.0
IPR001876	Zinc finger, RanBP2-type	PFAM	PF00641	zf-RanBP	coord: 393..421 e-value: 2.8E-10 score: 39.3 coord: 427..454 e-value: 1.9E-4 score: 20.7
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 397..416
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 430..449
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 426..455 score: 9.404914
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 393..422 score: 10.20666
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 386..422

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09170.1	Cp4.1LG11g09170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006260	DNA replication
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0042276	error-prone translesion synthesis
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016035	zeta DNA polymerase complex
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0000166	nucleotide binding