Cp4.1LG11g08800 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCGGGTATTCATAATTAAAACAAAAACCTAACGGCAATAGGCAGCAAAGCTCACTTGCTTCATTTTAGGGAGTCTTTCTTCCAGTTCTTATTTCTCTTCCACATATTTGGAATTCTCGTGTAAATTTCTCACCAAACTAGCATTTTCTTACCGAGATTCGAATTGGAGAGCATTCTCGTTGTTCATGAGCTTCAAGAACTTCCATGGGTTTCGATTTCGATTTCGATTTCGCGAAGAAGTGCGTTCAATTTCTGGTATTTATAATCGGCGCCATCGCCCTCAGTTTCATAGGTACGTTTGATTTAGATCGAAACTCTGATGTAAATTTGTTTTAGAAAGTACTTGAATCAATAGTTATTGATCTTTTCCTTTTCTTTTCTGGATATTTGATTTTACTTGTTACTCGAGAATGGTGGAGGAAGAAAGTAGTGGAAATCTTCGTATTTCTCTGTTAGGGTTTGTTGCAGGTGTCTTGAATTGGTGAAATACTAGTAGTAATCTTGTTTCTTGGTTTCTTGTTTCATAGAATTAGAATTTGTGAGGGTAAGATCCCACGTCGGTGGGGAGGAGAACGAAACACTCTTTATAAGGGTGTGAAAAACTTTTTCTAGTAGACGCGTTTTAAAAACCTTGAGGGGAAGCATGAAGGTAAAAGCCCAAAGAGGACAATATCTGCTAGCAGTGGGCTTGGGCCGTTACAAATGGTATCAGAGCCAGACACTGGGCGATGTGCCAGTGTGGAGGTTGTTTCCTAAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGCACACTAGACCCTGAAGGGAGGTGGATTTGGTAGGACACTAGGCCCTGAAGGGAGGTGGATTTGGTAGGGGTCCCACATCGATGGGATAAAGAAATGAGTGTCAGTGAGGACGCTGAGCCCTGAAGGGAGGTAGATTGTGAGATCCCACATCGGTTGGGGAGAAGAACGAAACACCCTTTATAAGGGTGTAGAATCCTTTCCCTAGCCGACGCGTTTTAAAAACTTTGAGGGGATGCTCGGAAGTGAAAGCCTAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGCCGTAGGGTTTGGAAAATCTTAATGGAACAGAACTATTGTGCTGATTTCTCTTGATCTTGCTTGAGTTTCTCATATCTTTTGTTTCACATCTTAAAACCAGTTTATGGTCAATTCCTGTTGTTTATTTGGTGAAATCTTACATCTAGAACTTGTTTTTCTGACTGTTTCTTTGTTTCTTTTGCACTAGAACCAATTAAAGTGTTCTTAGGAAAAATTACAAGCTCTTAAAGTGCTTTATGAAAAAGCTCTTGTAGACTGTTCTTGATCTGAGTGATTGTTAAAAAAAACACTTAAAAACACTTCTAAAAAGTGTAGAACTAAACATCAAAGCGATTACATCAACCCCTTTGCCGAGTTTACAGTGATTATTGAACTCCCCAAGTGTTTATGTATTGTATTATTGATCTGGAAGAGGAATTTTAATGGTGATAGGTGTTGGAAGAACTTAATTTTAATGGTGATAGGTGTTGGAAGAACTTAAGTATCATGTTTAGGAATAAAAGTTATGTATCTAATGTTAGAATTACGACTCTCTATTGTATGATATTGTCCACTTTGAGTATAAGCTCTCGTGACTTTGTGTTTGGGGAAAAGGCTTCATACCAATGAAGATGTGTTCCCTACTTATAAACCCATGATCATTCCCTAAATTAGCCAATGTGGGACTCCCTCCCAACCAATGATTCGATTTGAGAATTGTCATAAAGATTTGGTCAAGGAATCTTTTAGATTCATGAATACTTGGATTGATAAATATTTTTTGGTACATTCCCTACTTCGGTTCATGAATCTATTGGACTCGATTGTTTTTGCTTTTTGGATGGATCATAACGTAGTCACAACTCAAGGTTTGTCTAGTATTATTATGGATGCGGAGTGAGTGTCATTTTGTATTTACTTAAAGGCAATTGTGAAAGTGAGACTTTACAGTGTGAGAGTGTAAGAGATACACTTGTAAACACTCTGGTTATAGTGATTGGCTACCATTCATGGATGTAGTGAGTCAGCTCACTGTTTCTTGGCCACGCCCCCTGCAACTAGATATAAGATACTTGATCTAAATTCTCAAATAGGAAATTGCATACCGTTCGCTGATATACGTATAGGAACATGGGTACATGATATAGAATGTCATCCAGGTCAAAGCACAAAGCTGGCTCGAGAATTTCTTCTCTCCTTTGTTTCTTTCTGTTCGTAGGTGTGTGAGTGCGATCGATCTTGCTTCTACTTCCGCTTCCATCAATTCCAACCGTTTTTATGTCTTGGATGTGGGTTTTGTTTAGTAGACCGAATCATCGAGGGTGTTTATATTCTTTTATGGATCTACTAAGTATTCGAACGTTTGTCATATTATATCATTAGATATATGTTTGTTCCACAGTTTTTCACATACTTTGTAGTATTCACAGTTTCTTTTTCATAGTGGAGAAATGTCGACATGATCTGGTTAGGGAGGAAGCTTCATCCCAGAGTGGAAAGATCACATTCTTGAATTGTTTCGACATGGGTTCTGGATTACTTGCTTGTGGTGTGAAGGAGGGGGCAAAGCTCTACTTCTACAACATCCAAACCGCTCATGTCGAGACAGTACAACGCGAAGCATTCGAGACCGCCCTGGCCGACGCAGTGACAGAGGGAATGTCTGTGAATGATGCAGCAAAACACGCATGGAAAGAGGGAGTTAAGGCAGCAGAGGTGACAAAGCAACAAGCGAAACGCATCATAGGGCTGATCATCTCTTCTGGATGGGACTTTTTTAAAGCTCTATACTATAGCGGTACTGTAACAGAAGGGCTCCTCAGGGGCTCGGGGACGCTCGTTGGCGCATACTCGGGAGGCTTCATCGGCGAGCAAGGGCTCGGGAGGCTTGGCTACCTTGTAGGAAGTCATTTAGGTAGTTGGATTGGAGGTAGAATGGGAGTGATGGCATATGATGTTGTAGTGCATTTCTTACCCAATTTTGTTCATGAAAAGGAAGATTACGTTGGAAATGAGGCTTTTTTGGACTCCCGGGTTAACAAAGCTTCTATTTATGTCAGCTTTGAAGGTTGTGAAGAATCATAGGAATTTGATGGTCTTTTGGTTTTACTTGCAGAAT GGCGGGTATTCATAATTAAAACAAAAACCTAACGGCAATAGGCAGCAAAGCTCACTTGCTTCATTTTAGGGAGTCTTTCTTCCAGTTCTTATTTCTCTTCCACATATTTGGAATTCTCGTGTAAATTTCTCACCAAACTAGCATTTTCTTACCGAGATTCGAATTGGAGAGCATTCTCGTTGTTCATGAGCTTCAAGAACTTCCATGGGTTTCGATTTCGATTTCGATTTCGCGAAGAAGTGCGTTCAATTTCTGGTATTTATAATCGGCGCCATCGCCCTCAGTTTCATAGTGGAGAAATGTCGACATGATCTGGTTAGGGAGGAAGCTTCATCCCAGAGTGGAAAGATCACATTCTTGAATTGTTTCGACATGGGTTCTGGATTACTTGCTTGTGGTGTGAAGGAGGGGGCAAAGCTCTACTTCTACAACATCCAAACCGCTCATGTCGAGACAGTACAACGCGAAGCATTCGAGACCGCCCTGGCCGACGCAGTGACAGAGGGAATGTCTGTGAATGATGCAGCAAAACACGCATGGAAAGAGGGAGTTAAGGCAGCAGAGGTGACAAAGCAACAAGCGAAACGCATCATAGGGCTGATCATCTCTTCTGGATGGGACTTTTTTAAAGCTCTATACTATAGCGGTACTGTAACAGAAGGGCTCCTCAGGGGCTCGGGGACGCTCGTTGGCGCATACTCGGGAGGCTTCATCGGCGAGCAAGGGCTCGGGAGGCTTGGCTACCTTGTAGGAAGTCATTTAGGTAGTTGGATTGGAGGTAGAATGGGAGTGATGGCATATGATGTTGTAGTGCATTTCTTACCCAATTTTGTTCATGAAAAGGAAGATTACGTTGGAAATGAGGCTTTTTTGGACTCCCGGGTTAACAAAGCTTCTATTTATGTCAGCTTTGAAGGTTGTGAAGAATCATAGGAATTTGATGGTCTTTTGGTTTTACTTGCAGAAT ATGGGTTTCGATTTCGATTTCGATTTCGCGAAGAAGTGCGTTCAATTTCTGGTATTTATAATCGGCGCCATCGCCCTCAGTTTCATAGTGGAGAAATGTCGACATGATCTGGTTAGGGAGGAAGCTTCATCCCAGAGTGGAAAGATCACATTCTTGAATTGTTTCGACATGGGTTCTGGATTACTTGCTTGTGGTGTGAAGGAGGGGGCAAAGCTCTACTTCTACAACATCCAAACCGCTCATGTCGAGACAGTACAACGCGAAGCATTCGAGACCGCCCTGGCCGACGCAGTGACAGAGGGAATGTCTGTGAATGATGCAGCAAAACACGCATGGAAAGAGGGAGTTAAGGCAGCAGAGGTGACAAAGCAACAAGCGAAACGCATCATAGGGCTGATCATCTCTTCTGGATGGGACTTTTTTAAAGCTCTATACTATAGCGGTACTGTAACAGAAGGGCTCCTCAGGGGCTCGGGGACGCTCGTTGGCGCATACTCGGGAGGCTTCATCGGCGAGCAAGGGCTCGGGAGGCTTGGCTACCTTGTAGGAAGTCATTTAGGTAGTTGGATTGGAGGTAGAATGGGAGTGATGGCATATGATGTTGTAGTGCATTTCTTACCCAATTTTGTTCATGAAAAGGAAGATTACGTTGGAAATGAGGCTTTTTTGGACTCCCGGGTTAACAAAGCTTCTATTTATGTCAGCTTTGAAGGTTGTGAAGAATCATAG MGFDFDFDFAKKCVQFLVFIIGAIALSFIVEKCRHDLVREEASSQSGKITFLNCFDMGSGLLACGVKEGAKLYFYNIQTAHVETVQREAFETALADAVTEGMSVNDAAKHAWKEGVKAAEVTKQQAKRIIGLIISSGWDFFKALYYSGTVTEGLLRGSGTLVGAYSGGFIGEQGLGRLGYLVGSHLGSWIGGRMGVMAYDVVVHFLPNFVHEKEDYVGNEAFLDSRVNKASIYVSFEGCEES Homology
BLAST of Cp4.1LG11g08800 vs. NCBI nr
Match: XP_023545318.1 (uncharacterized protein LOC111804760 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 482 bits (1240), Expect = 1.54e-171 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. NCBI nr
Match: XP_022946415.1 (uncharacterized protein LOC111450479 [Cucurbita moschata]) HSP 1 Score: 467 bits (1201), Expect = 1.27e-165 Identity = 236/242 (97.52%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. NCBI nr
Match: KAG7030121.1 (hypothetical protein SDJN02_08468, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 462 bits (1188), Expect = 1.22e-163 Identity = 235/242 (97.11%), Postives = 236/242 (97.52%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. NCBI nr
Match: KAG6599187.1 (hypothetical protein SDJN03_08965, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 362 bits (929), Expect = 5.22e-125 Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. NCBI nr
Match: XP_022999574.1 (uncharacterized protein LOC111493899 [Cucurbita maxima]) HSP 1 Score: 357 bits (915), Expect = 9.41e-123 Identity = 180/189 (95.24%), Postives = 183/189 (96.83%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. ExPASy TrEMBL
Match: A0A6J1G3T3 (uncharacterized protein LOC111450479 OS=Cucurbita moschata OX=3662 GN=LOC111450479 PE=4 SV=1) HSP 1 Score: 467 bits (1201), Expect = 6.14e-166 Identity = 236/242 (97.52%), Postives = 238/242 (98.35%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. ExPASy TrEMBL
Match: A0A6J1KHG8 (uncharacterized protein LOC111493899 OS=Cucurbita maxima OX=3661 GN=LOC111493899 PE=4 SV=1) HSP 1 Score: 357 bits (915), Expect = 4.56e-123 Identity = 180/189 (95.24%), Postives = 183/189 (96.83%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. ExPASy TrEMBL
Match: A0A5D3B9C7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001140 PE=4 SV=1) HSP 1 Score: 333 bits (855), Expect = 9.15e-113 Identity = 181/251 (72.11%), Postives = 200/251 (79.68%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. ExPASy TrEMBL
Match: A0A5A7U1F4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001360 PE=4 SV=1) HSP 1 Score: 333 bits (855), Expect = 9.15e-113 Identity = 181/251 (72.11%), Postives = 200/251 (79.68%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. ExPASy TrEMBL
Match: A0A0A0LK00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034500 PE=4 SV=1) HSP 1 Score: 333 bits (855), Expect = 9.15e-113 Identity = 179/251 (71.31%), Postives = 201/251 (80.08%), Query Frame = 0
BLAST of Cp4.1LG11g08800 vs. TAIR 10
Match: AT1G56423.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 246.1 bits (627), Expect = 2.8e-65 Identity = 127/223 (56.95%), Postives = 162/223 (72.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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