Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGCTCTCATGGCATCCCTGTTCTTCTTCTCGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCCATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTGCCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGATGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCGAGCACATATCCAGAAAGCCTTTAAGTTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAGTCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA
mRNA sequence
ATGGGTGGCTCTCATGGCATCCCTGTTCTTCTTCTCGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCCATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTGCCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGATGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCGAGCACATATCCAGAAAGCCTTTAAGTTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAGTCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA
Coding sequence (CDS)
ATGGGTGGCTCTCATGGCATCCCTGTTCTTCTTCTCGCAGTTTTTTACCTAGCCATTTTCCCTTCTCATGGAATCCTCCATGGAAATCTGGCCACCATTTGCCATAAAACCCCCGATCCGTTCAGCTGCCAGAGAATCCTTGGTAACGTTCCCGGTGCCATCTCGGCTGACCTCCCTAAGCTCTCGCTTATATCCATCAATCTGACGATGAACCAAGCCGATCAAAACCTTGATTCCTTCTCCAAATTAAGTAAGAATGAGAGTGATCCTGAGCTGAAGAAGAGTTTCAAGCATTGTGTGAAGTATTACCATGAAATTCGAGCACATATCCAGAAAGCCTTTAAGTTCTCACGGAAGAAGATTTTCAGAGATAATCATCCATTGGTAACATCAAAGAAACTTGTTAAAAGGTGTAGTCAAGCCATCAGAATCAACTCATTGGATATTGAAGTCATGAACAAACGTATGATCCTAAGCTGTGATATTTCAATGAGTGTAAATCACTATGCTACTGCTAATGCCCACATTCAGTAA
Protein sequence
MGGSHGIPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISINLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNHPLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ
Homology
BLAST of Cp4.1LG11g08620 vs. ExPASy Swiss-Prot
Match:
A9YUH4 (Putative invertase inhibitor OS=Platanus orientalis OX=122832 PE=1 SV=1)
HSP 1 Score: 47.0 bits (110), Expect = 2.6e-04
Identity = 33/111 (29.73%), Postives = 55/111 (49.55%), Query Frame = 0
Query: 12 LAVFYLAIFPSHGILHGNLATICHKTPDP--FSCQRILGNVPGAISADLPKLSLISINLT 71
L +F+L S I+ G + ++P+ C + LG P + SADL L +IS NL
Sbjct: 7 LCIFFLI---SADIVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHSADLQGLGVISANLA 66
Query: 72 MNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKK 121
+ Q + ++ K++ DP LKK CV Y + ++ +Q+A + K
Sbjct: 67 IQQGSKIQTFIGRILKSKVDPALKKYLNDCVGLYADAKSSVQEAIADFKSK 114
BLAST of Cp4.1LG11g08620 vs. NCBI nr
Match:
KAG6599172.1 (hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030110.1 hypothetical protein SDJN02_08457, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 338 bits (867), Expect = 7.95e-117
Identity = 170/177 (96.05%), Postives = 173/177 (97.74%), Query Frame = 0
Query: 1 MGGSHGIPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPK 60
MG SHGIPVLLLAVFYLAIFPSHGILHGNLATIC+KTPDPFSCQRILGNVPG ISADLPK
Sbjct: 1 MGCSHGIPVLLLAVFYLAIFPSHGILHGNLATICYKTPDPFSCQRILGNVPGTISADLPK 60
Query: 61 LSLISINLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKK 120
LSLISINLT NQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEI+AHIQKAFK SRKK
Sbjct: 61 LSLISINLTKNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIQAHIQKAFKLSRKK 120
Query: 121 IFRDNHPLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ 177
IFRDNHPLVTSKKLVKRC+QAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ
Sbjct: 121 IFRDNHPLVTSKKLVKRCNQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ 177
BLAST of Cp4.1LG11g08620 vs. NCBI nr
Match:
KAA0048111.1 (pectinesterase inhibitor [Cucumis melo var. makuwa])
HSP 1 Score: 234 bits (598), Expect = 8.76e-76
Identity = 121/171 (70.76%), Postives = 139/171 (81.29%), Query Frame = 0
Query: 7 IPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISI 66
IP LLLA F L IFPSHGI H NL TIC KT +P C++IL N +SADLPKLSLI
Sbjct: 11 IPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSADLPKLSLICS 70
Query: 67 NLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNH 126
NL QADQNLD+F KLSKNESDPE+KKSF+HCV+YYHEI+++IQKA++FS++KIFR+N
Sbjct: 71 NLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFRENG 130
Query: 127 PLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ 177
PLV SK+LV RCSQAIRINSL IEVMNK MIL CDIS+SVN A AN HIQ
Sbjct: 131 PLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHIQ 181
BLAST of Cp4.1LG11g08620 vs. NCBI nr
Match:
KAE8651630.1 (hypothetical protein Csa_021165 [Cucumis sativus])
HSP 1 Score: 227 bits (578), Expect = 3.49e-67
Identity = 117/169 (69.23%), Postives = 136/169 (80.47%), Query Frame = 0
Query: 7 IPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISI 66
IP LLLA F L +FPSHGI H NL TIC KT +P C++IL N +SA+LPKLSLI
Sbjct: 500 IPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICS 559
Query: 67 NLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNH 126
NL QADQNLD+F KLSKNESDPE KKSF+HCVKYYHEI+++IQKA++FS++KIFR+N
Sbjct: 560 NLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENG 619
Query: 127 PLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAH 175
PLV SK+LV +CSQAIRINSL IEVMNK MIL CDIS+SVN A AN H
Sbjct: 620 PLVASKRLVLKCSQAIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 668
BLAST of Cp4.1LG11g08620 vs. NCBI nr
Match:
KAB1201343.1 (Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor [Morella rubra])
HSP 1 Score: 127 bits (320), Expect = 1.08e-33
Identity = 71/163 (43.56%), Postives = 103/163 (63.19%), Query Frame = 0
Query: 7 IPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISI 66
+ V +L+V I+PS G+ H L TIC KT + +C+R L + SADLPKLSLISI
Sbjct: 8 VSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSLISI 67
Query: 67 NLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNH 126
LTM QAD N +FS L N +DP L+ SF++CV +Y E++A I+ A+ S+K+ ++
Sbjct: 68 ELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQKIT 127
Query: 127 PLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHY 169
LV S++L + C+ I IN L+I+ + M+L+ S SVN Y
Sbjct: 128 ELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQY 170
BLAST of Cp4.1LG11g08620 vs. NCBI nr
Match:
VVA33128.1 (PREDICTED: pectinesterase inhibitor [Prunus dulcis])
HSP 1 Score: 119 bits (297), Expect = 3.32e-30
Identity = 64/161 (39.75%), Postives = 100/161 (62.11%), Query Frame = 0
Query: 9 VLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISINL 68
++++A F++ F G+ + L IC KT +P +C L VP SADLP+LSLISI L
Sbjct: 12 IVIVASFFIGSF---GVSYKTLTKICSKTQNPKTCMTNLQTVPCTTSADLPELSLISIEL 71
Query: 69 TMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNHPL 128
QADQNL++F +LS N + ++K+ F CV++Y E+R IQ A S+K+ + +N L
Sbjct: 72 AGKQADQNLETFRELSHNATAAKMKEEFDTCVRFYKEVRPQIQAAHLLSQKRQYENNSAL 131
Query: 129 VTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHY 169
+ + + RCS I ++SL+I + + ++L D S+SVN Y
Sbjct: 132 LQANEFALRCSLGISVDSLEINQLQESVLLKLDTSISVNRY 169
BLAST of Cp4.1LG11g08620 vs. ExPASy TrEMBL
Match:
A0A5A7U3I1 (Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001900 PE=4 SV=1)
HSP 1 Score: 234 bits (598), Expect = 4.24e-76
Identity = 121/171 (70.76%), Postives = 139/171 (81.29%), Query Frame = 0
Query: 7 IPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISI 66
IP LLLA F L IFPSHGI H NL TIC KT +P C++IL N +SADLPKLSLI
Sbjct: 11 IPALLLATFSLTIFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSADLPKLSLICS 70
Query: 67 NLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNH 126
NL QADQNLD+F KLSKNESDPE+KKSF+HCV+YYHEI+++IQKA++FS++KIFR+N
Sbjct: 71 NLAKKQADQNLDTFYKLSKNESDPEVKKSFEHCVEYYHEIQSNIQKAYQFSQQKIFRENG 130
Query: 127 PLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAHIQ 177
PLV SK+LV RCSQAIRINSL IEVMNK MIL CDIS+SVN A AN HIQ
Sbjct: 131 PLVASKRLVLRCSQAIRINSLHIEVMNKLMILCCDISISVNQCAAANGHIQ 181
BLAST of Cp4.1LG11g08620 vs. ExPASy TrEMBL
Match:
A0A0A0LK13 (PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 SV=1)
HSP 1 Score: 225 bits (574), Expect = 2.10e-72
Identity = 116/169 (68.64%), Postives = 135/169 (79.88%), Query Frame = 0
Query: 7 IPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISI 66
IP LLLA F L +FPSHGI H NL TIC KT +P C++IL N +SA+LPKLSLI
Sbjct: 11 IPALLLAAFSLTVFPSHGIPHENLVTICSKTSNPSLCEKILNNDSRTVSANLPKLSLICS 70
Query: 67 NLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNH 126
NL QADQNLD+F KLSKNESDPE KKSF+HCVKYYHEI+++IQKA++FS++KIFR+N
Sbjct: 71 NLAKKQADQNLDTFYKLSKNESDPEEKKSFEHCVKYYHEIQSNIQKAYQFSQQKIFRENG 130
Query: 127 PLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHYATANAH 175
PLV SK+LV +CSQ IRINSL IEVMNK MIL CDIS+SVN A AN H
Sbjct: 131 PLVASKRLVLKCSQTIRINSLYIEVMNKLMILCCDISISVNQCAAANGH 179
BLAST of Cp4.1LG11g08620 vs. ExPASy TrEMBL
Match:
A0A6A1UMD5 (Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=1)
HSP 1 Score: 127 bits (320), Expect = 5.24e-34
Identity = 71/163 (43.56%), Postives = 103/163 (63.19%), Query Frame = 0
Query: 7 IPVLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISI 66
+ V +L+V I+PS G+ H L TIC KT + +C+R L + SADLPKLSLISI
Sbjct: 8 VSVTVLSVASFLIYPSSGVSHDILTTICSKTQNHDACERSLESDSRTRSADLPKLSLISI 67
Query: 67 NLTMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNH 126
LTM QAD N +FS L N +DP L+ SF++CV +Y E++A I+ A+ S+K+ ++
Sbjct: 68 ELTMKQADHNHRTFSDLRDNATDPRLEDSFRNCVGFYKEMQAQIRAAYHLSQKRQYQKIT 127
Query: 127 PLVTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHY 169
LV S++L + C+ I IN L+I+ + M+L+ S SVN Y
Sbjct: 128 ELVQSERLAQECASGIPINCLEIDALTTTMLLAIKTSESVNQY 170
BLAST of Cp4.1LG11g08620 vs. ExPASy TrEMBL
Match:
A0A5E4G0J4 (PREDICTED: pectinesterase inhibitor OS=Prunus dulcis OX=3755 GN=ALMOND_2B005171 PE=4 SV=1)
HSP 1 Score: 119 bits (297), Expect = 1.61e-30
Identity = 64/161 (39.75%), Postives = 100/161 (62.11%), Query Frame = 0
Query: 9 VLLLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISINL 68
++++A F++ F G+ + L IC KT +P +C L VP SADLP+LSLISI L
Sbjct: 12 IVIVASFFIGSF---GVSYKTLTKICSKTQNPKTCMTNLQTVPCTTSADLPELSLISIEL 71
Query: 69 TMNQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNHPL 128
QADQNL++F +LS N + ++K+ F CV++Y E+R IQ A S+K+ + +N L
Sbjct: 72 AGKQADQNLETFRELSHNATAAKMKEEFDTCVRFYKEVRPQIQAAHLLSQKRQYENNSAL 131
Query: 129 VTSKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHY 169
+ + + RCS I ++SL+I + + ++L D S+SVN Y
Sbjct: 132 LQANEFALRCSLGISVDSLEINQLQESVLLKLDTSISVNRY 169
BLAST of Cp4.1LG11g08620 vs. ExPASy TrEMBL
Match:
A0A438CFW3 (PMEI domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_097019 PE=4 SV=1)
HSP 1 Score: 107 bits (268), Expect = 3.62e-26
Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 0
Query: 11 LLAVFYLAIFPSHGILHGNLATICHKTPDPFSCQRILGNVPGAISADLPKLSLISINLTM 70
LL VF L P+ G+ LA+IC +T + C+ IL + PG SADL LSLISINLTM
Sbjct: 14 LLMVFSLFTSPTSGVTQETLASICSQTQNQEICEGILESDPGTTSADLHGLSLISINLTM 73
Query: 71 NQADQNLDSFSKLSKNESDPELKKSFKHCVKYYHEIRAHIQKAFKFSRKKIFRDNHPLVT 130
Q N D+F+K N +D LK+SF++CV Y+ I ++ A++ S KK +
Sbjct: 74 KQGSSNYDTFTKFMDNSTDTALKESFRNCVSLYNSIMEMLKVAYQLSEKKEYESITQPGE 133
Query: 131 SKKLVKRCSQAIRINSLDIEVMNKRMILSCDISMSVNHY 169
S+ L C+ + I+S + +++ MIL+C+ S SVN Y
Sbjct: 134 SQTLAYNCANGLPIDS-PTDGISRDMILTCETSASVNQY 171
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
A9YUH4 | 2.6e-04 | 29.73 | Putative invertase inhibitor OS=Platanus orientalis OX=122832 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAG6599172.1 | 7.95e-117 | 96.05 | hypothetical protein SDJN03_08950, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0048111.1 | 8.76e-76 | 70.76 | pectinesterase inhibitor [Cucumis melo var. makuwa] | [more] |
KAE8651630.1 | 3.49e-67 | 69.23 | hypothetical protein Csa_021165 [Cucumis sativus] | [more] |
KAB1201343.1 | 1.08e-33 | 43.56 | Pectinesterase inhibitor [Morella rubra] >KAB1224060.1 Pectinesterase inhibitor ... | [more] |
VVA33128.1 | 3.32e-30 | 39.75 | PREDICTED: pectinesterase inhibitor [Prunus dulcis] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U3I1 | 4.24e-76 | 70.76 | Pectinesterase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... | [more] |
A0A0A0LK13 | 2.10e-72 | 68.64 | PMEI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G034700 PE=4 S... | [more] |
A0A6A1UMD5 | 5.24e-34 | 43.56 | Pectinesterase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR0G004165 PE=4 SV=... | [more] |
A0A5E4G0J4 | 1.61e-30 | 39.75 | PREDICTED: pectinesterase inhibitor OS=Prunus dulcis OX=3755 GN=ALMOND_2B005171 ... | [more] |
A0A438CFW3 | 3.62e-26 | 40.25 | PMEI domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_097019 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |