Cp4.1LG11g08360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g08360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	signal recognition particle receptor subunit alpha-like
Location	Cp4.1LG11: 6832884 .. 6838391 (+)
RNA-Seq Expression	Cp4.1LG11g08360
Synteny	Cp4.1LG11g08360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATTTCCAATATAATAAAAGGGGGAGACAAACTTAGACTTCCGTTTCCTTGTTCTTCCCTTTTCTTCTAGGAATCTTTTCTTCTTCCTTTCAATTTTTTCTTGTAGATCTTGTTTTTTTTTTCGCCCCCTCCTTCTGTAGTTTGTTTTTTTTTTTTTTTTGTTTTTTATTTAGACTTCCGAGAAAGGCATCGATTACAGGTTCGTTTCTTCTCTCCCTCGTTTTTTTTTTCTTTCCCGATTGATGCATTTCCTGTTTTTCCACTTTTGGATTGGAATTGTTACGATCTACGTTAAATCTCGTTTGATCCATGCCCTAGATTGAAATTGTAATTACACATCATGATAGGTTTTCTCGATCGTGGATTTTTTTTTTTTATATATTTGTTTTCGAAATTTTGTTTCTGGATGATTTCCTCCTCGATTTGATAATTAGTTTGCGCGTTCGGTGGAATCGACATGATTTAAGATTCGTATGTTTAGTTGCTTATAAAATGATGATTTGGTTAGAGTTATTGAAATATCGAAAGTTTTTCTTTACTATTTCTATTGGTTTGATCCATTTCCCCCCATTTTGTCATTTTCATCGTTGATTACATTGTTATGTTCATGTCGAAGGAAATCACTATGATTTCGGACAATTGATTTGGTTGCATAGCGATTTTGTGGTTGGAAGTTCGGCATCTTAGGATCTTGCAGCGAGAATAATTTGGGCGAATCTTAGAAAATCACAATTAAGCTCTTTCCTTGTCGGAGTTTCTTCTCAATGTAATCACAGCCCTCATATCTTTATACCCGCTTCATCCACATTTGCCCTATCGCCGTTGTGCTGGCGTGCCTTATCATTAGGATTTTCATTGTAGAGTCGGGAACAAGAGAGGTTGCTTTGCACAAGTTACATACTTTCAATCCTCTGGGAGAAAGTATGTTATCATTTCACATAACTCAAAGATTTTAAGATAAACTCAATATGGGAGTGGTTTCATTAGGATTGCAGGGTTAGGAACAAGAGATGTTGCTTCGCACAAGTTACACACTTTCTATCCTCAGGAAGAAAAGCCTGTAACATCATTGTTCAGGGAGAAGATCGGGGTGGTTGGAATGTTGTATTGTCCTTTTGGTCTTTAGGTTGTTTGTTGGTCTGTTAAATTGAAAGTTTCTTGTTTCCTATAAAATTGAAAGTTATTCCCTTGGAATAATATTGTACTTCATGGTCTTTTGTTATTGTGATTTAGAGAATTGATTGAATCAAATAGTGATCTGTTGGATGGCTACAGTTAACTTTTGGAGCCATCAATTATTCTGGAATCCTTTGTGATTGTAGGTTGTGATTAGAACCATGCAATGTCATCTGAGGGAAGTTTCATTAAGTTATTAAAATGAATGTATTTATTTGCAGGGTGTTTGAAATAGATCAAGATGTTAGAGCAGTTGCTGATATTCACTAGGGGGGGTTTGATCCTATGGACTTGTAAGGAGCTTGGAAATGCACTTAGAGGGTCTCCTATTGACACTTTAATCAGATCCTGTCTTTTAGAGGAACGGTCAGGTGCAGCATCTTACAATTATGATGCCCCAGGTGCTGCCTACACCCTCAAGTGGACCTTCCACAATGAGCTTGGCCTTGTATTTGTTGCAGTGTATCAACGGATTCTTCATTTATTGTATGTGGATGACTTGCTTTCCATGGTGAAGCAGGGGTTTTCTGAGATATATGATCCAAAGCAGATGGTCTATGATGATTTTGATGAAACCTTTAGGCAACTTAGAATGGAGGCTGAGGCTCGTGCTAATGAGTTGAAAAATTCAAAGCAGGTGGGGAAGCCATTGAACAATGCCAGGAAGCAAGGGCAGGATCAAAAAACTGGATTTGGAGAAAACAAGAAAAGCAATAGTGGTTTGGCAGATGGAGGAGATGCTGAGCGTACAAAGGGACGTAAGTTGGAGAATGGTTGCTCCAATGGCGATCATGTTATAGAATCTAAACTGACAGCAGTCGTTAATGGAAAAGACAATGCAAGTTCCAATGTTGGGGCTTTTGATGTAAATAAACTTCAGAAGCTTAGGTCTAAAGGTGGGAAGAAAACTGATACTATAGCTAACAAGGGCTCCAAGGAAGAGTCAAAGAAAAAGGTAACAAAAAAGAATAGAGTTTGGGATGATAAACCTACTGAGGCAAAATTAGACTTCACAGATGCTGTGGGTGAGGAAGGGGACAACAACATCGAGGTTTTCGCAGCCGATCAGGGCCAAAGTATGATGGACAAAGAAGAGGTTTTTAGTAGTGACAGTGAGGAAGAAGAAGAAGATGAGGAAGGTGACAACGGTAGTAAGCCTGATGCAAAGAAGAAAGGATGGTTTTCATCTATGTTCCAGAGGTAAACTTCTTTCTGCATTCATGACCTCATCTTTCTTGACCAGTTTACTAACAATTTTAAAAAAGTTATGGATTATGGTAAACTTACGCTCTTTAGTTCCTTGTGCTTTATTTTATGCAGTTGGTCGATTATATTATCGAACTTTCAAATTCTCTGATACATCAATTTGACATTTTTCATCTACCATTTTGGTTTCCACTTTCTTGTCCCCCATATTTATTTCTTAACGTTTGTTACGTTTTCTCAATGAAAGTTTTTGTTTCATGAAAGAAAAATGGTGCTAATTTCCTCTCCTTTTTTCGTCAGTGTGAAATTATTAAATTTATATTACATTTGTTATCTGGGCATTTTATATGTTTTAGCTGGATGGTTGCATTGGGTTTTGTAGTTGAGTTCAAAACTTGTGACTTACATTTTGAGAGCACTAACAGGCCTTTAATACTGTCATTTAGTAACAAAAACGAGTTATATTGTATAGAAAGTCTTTTGGAGTTTTGATATTAAGATGAACCTATGTGTATGTGTTATAAATAATTTTAGAGATGACTTATTTTGTTCTGGGGAGTGTATCTTAAAATCACAACCAGAAATTCCATCTTGTTCTTTGTGACAGGACTTATTTTGTGAATACTTTGATATGTAACTTTAATGTGTGATTATCAATCTAATATTTATTTTTATTTTTGGTACTTTCGTGTTTCCAGTATCTCAGGCAAGGCAAGTTTGGATAAGTCAGACCTGGAACCAGCTCTGAAAGCTCTCAAGGACAGGCTCATGACAAAGAATGTGGTATGTTTTCATATCATATTTATCTTATCATCTCTTGTTCGTAACTATGGCTGCAAATTAACAAGATATATCCTGGTTGGATTTTAGGCTGAGGAGATAGCTGAGAAACTTTGTGAATCAGTAGCTGCTAGTCTCGAGGGAAAAAAGCTAGCTTCTTTCACGAGGATTTCTTCAACAGTGCAGGTACATCTTTGAATAGCCACTTGTCCAGTGTTTATTCTCACCTACATTTCTAATTTAATTTTGTTAGTGACCAAAACTGTAACGACCCAAGCCCACCGCTAGCCGATATTGCCCTCTTTGAGCTTTCTCTTTCGGACTTCTCCTCGAGGTTTTTAAAATGCGTCTATTAGGGAGAGGTTTCCACACCCTTATAAAAAATGATTCGTATCGTTCTCCTCCCCAACTGATGTGGGATCTCACAAAAGCCATTGCTTTAATTTCTCATTGTAGGCTGCAATGGAAGAAGCTCTAGTCCGCATACTGACTCCAAGACGCTCCATTGACATTCTGAGGGATGTGCATGCTGCAAAAGAACAAAAGAAGCCTTATGTGGTAGTTTTTGTTGGGGTCAATGGAGTTGGAAAATCTACTAATCTTGCCAAGGTCAGGCCCCTTCCTTCCTCCACAAGTTTTCATGTGTTTTCGACATGGCTTTTGTTTAGGGAGTTAAATGCTTAACTTTGATATACAGGTGGCCTATTGGCTTCTGCAGCATAAAGTTAGTGTCATGATGGCCGCCTGCGATACATTTAGATCTGGAGCCGTGGAACAGCTTCGAACTCATGCTCGTAGACTTCAGGTATATGATCTCACATCAATGTTTAATTTTCGTTAATCATGAAATTGTTTATCAGGACTCATTGCCTATATTTATCCTCAATCTTTTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCAATTGTAGCTAAAGAAGCAATCCAAGAGGCATCCCGAAATGGATCAGATGTGGTTCTTGTTGATACAGCTGGGAGAATGCAGGTTTGTATCTTTTCTTATTATCCAAAATTGAAATGATTGTGGATCTCTTGCATATTTTGTAACATTTTTCCATATCATCTCGACCAAATATTCAAATTTTATCAAAGAAATAATATTGAAATGACTGTATTCTGTACACAGTTGATGTGGAAACATAGAAACATGGATAAAAGAAAGAGATGCTGGCTATGAATCACTCGCATATTCTTCTGAATTATACGTATCTGTAGGATTAATTTGAAAAACTCGTAGGGATATGCAAGAAGGAACAATTTTTATTAGAAACATTCCTCTAATGAATTCCCTAGGAACTTCGGTAGTAAATAGACTATACAGAATTGTGATCAGTCAAATATTGTAAAGCCTTGGTATTTATTACCGGTCAGAATTGGACCGTAACGGAATTTTGGTCTATACTGGCACCATAATATCTGATTTGGAGGCCTAAATATTGGATGCAAAATTGTGTCTGCCTCTATTTTGGTTTTGAATTTTTTATTCATTCATATCAAAACATGTTCCAACTCTCAGGATAACGAACCACTCATGAGAGCTCTCTCAAAGCTTATCAACCTTAACAAACCGGATCTGGTCTTGTTCGTCGGGGAGGCCCTCGTCGGGAATGATGCCGTCGATCAACTTTCGAAGTTTAATCAGGTTTTCTTTACATGATACCTATACCTATCCACAGTACTAGTTTTCAACCAGCCCTCCATCTTATACATTTTCTGGTTCTTGTCACTGCAGAAACTAGCTGATCTCTCAACTACACCCCAACCCAGACTGATTGATGGTATCTTGCTCACGAAGTTCGATACGATTGACGACAAGGTAAACAAATTTAGGAATATTCATAGCTTATCAGGGAAATCCTAATCAATTGCTTGTCGGGGTTACTTGCAGGTCGGAGCAGCATTGTCTATGGTTTACATATCGGGAGCACCGGTAATGTTCGTCGGCTGTGGACAGTCGTATACCGACCTGAAGAAACTCAATGTCAAATCGATCGTCAAAACGCTGATTAAATGAGAGCCCTATGTCCAAGTCTATGCACCCAATGATATAATGTTACCATCCTTTAGTCTGTTGGATGGATTTGTTTTGCCTTGCCTTTTCCCTCTTCTTTTCCCATGGCTTCCTCTCTTTTGTATTTTTTGAGGTCGTCTGTTTTTCTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTCATTTTAAATACGTAGGGACAAATATATTCGAGTATTGTATCATTTCATCATATGTGAAATATTTAAAATATGAGAACTTATTTCTGACAAATTCACCCCTTTTGAATTCT

mRNA sequence

ATTTTATTTCCAATATAATAAAAGGGGGAGACAAACTTAGACTTCCGTTTCCTTGTTCTTCCCTTTTCTTCTAGGAATCTTTTCTTCTTCCTTTCAATTTTTTCTTGTAGATCTTGTTTTTTTTTTCGCCCCCTCCTTCTGTAGTTTGTTTTTTTTTTTTTTTTGTTTTTTATTTAGACTTCCGAGAAAGGCATCGATTACAGGGTGTTTGAAATAGATCAAGATGTTAGAGCAGTTGCTGATATTCACTAGGGGGGGTTTGATCCTATGGACTTGTAAGGAGCTTGGAAATGCACTTAGAGGGTCTCCTATTGACACTTTAATCAGATCCTGTCTTTTAGAGGAACGGTCAGGTGCAGCATCTTACAATTATGATGCCCCAGGTGCTGCCTACACCCTCAAGTGGACCTTCCACAATGAGCTTGGCCTTGTATTTGTTGCAGTGTATCAACGGATTCTTCATTTATTGTATGTGGATGACTTGCTTTCCATGGTGAAGCAGGGGTTTTCTGAGATATATGATCCAAAGCAGATGGTCTATGATGATTTTGATGAAACCTTTAGGCAACTTAGAATGGAGGCTGAGGCTCGTGCTAATGAGTTGAAAAATTCAAAGCAGGTGGGGAAGCCATTGAACAATGCCAGGAAGCAAGGGCAGGATCAAAAAACTGGATTTGGAGAAAACAAGAAAAGCAATAGTGGTTTGGCAGATGGAGGAGATGCTGAGCGTACAAAGGGACGTAAGTTGGAGAATGGTTGCTCCAATGGCGATCATGTTATAGAATCTAAACTGACAGCAGTCGTTAATGGAAAAGACAATGCAAGTTCCAATGTTGGGGCTTTTGATGTAAATAAACTTCAGAAGCTTAGGTCTAAAGGTGGGAAGAAAACTGATACTATAGCTAACAAGGGCTCCAAGGAAGAGTCAAAGAAAAAGGTAACAAAAAAGAATAGAGTTTGGGATGATAAACCTACTGAGGCAAAATTAGACTTCACAGATGCTGTGGGTGAGGAAGGGGACAACAACATCGAGGTTTTCGCAGCCGATCAGGGCCAAAGTATGATGGACAAAGAAGAGGTTTTTAGTAGTGACAGTGAGGAAGAAGAAGAAGATGAGGAAGGTGACAACGGTAGTAAGCCTGATGCAAAGAAGAAAGGATGGTTTTCATCTATGTTCCAGAGTATCTCAGGCAAGGCAAGTTTGGATAAGTCAGACCTGGAACCAGCTCTGAAAGCTCTCAAGGACAGGCTCATGACAAAGAATGTGGCTGAGGAGATAGCTGAGAAACTTTGTGAATCAGTAGCTGCTAGTCTCGAGGGAAAAAAGCTAGCTTCTTTCACGAGGATTTCTTCAACAGTGCAGGTGGCCTATTGGCTTCTGCAGCATAAAGTTAGTGTCATGATGGCCGCCTGCGATACATTTAGATCTGGAGCCGTGGAACAGCTTCGAACTCATGCTCGTAGACTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCAATTGTAGCTAAAGAAGCAATCCAAGAGGCATCCCGAAATGGATCAGATGTGGTTCTTGTTGATACAGCTGGGAGAATGCAGGATAACGAACCACTCATGAGAGCTCTCTCAAAGCTTATCAACCTTAACAAACCGGATCTGGTCTTGTTCGTCGGGGAGGCCCTCGTCGGGAATGATGCCGTCGATCAACTTTCGAAGTTTAATCAGAAACTAGCTGATCTCTCAACTACACCCCAACCCAGACTGATTGATGGTATCTTGCTCACGAAGTTCGATACGATTGACGACAAGGTCGGAGCAGCATTGTCTATGGTTTACATATCGGGAGCACCGGTAATGTTCGTCGGCTGTGGACAGTCGTATACCGACCTGAAGAAACTCAATGTCAAATCGATCGTCAAAACGCTGATTAAATGAGAGCCCTATGTCCAAGTCTATGCACCCAATGATATAATGTTACCATCCTTTAGTCTGTTGGATGGATTTGTTTTGCCTTGCCTTTTCCCTCTTCTTTTCCCATGGCTTCCTCTCTTTTGTATTTTTTGAGGTCGTCTGTTTTTCTANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTCATTTTAAATACGTAGGGACAAATATATTCGAGTATTGTATCATTTCATCATATGTGAAATATTTAAAATATGAGAACTTATTTCTGACAAATTCACCCCTTTTGAATTCT

Coding sequence (CDS)

ATGTTAGAGCAGTTGCTGATATTCACTAGGGGGGGTTTGATCCTATGGACTTGTAAGGAGCTTGGAAATGCACTTAGAGGGTCTCCTATTGACACTTTAATCAGATCCTGTCTTTTAGAGGAACGGTCAGGTGCAGCATCTTACAATTATGATGCCCCAGGTGCTGCCTACACCCTCAAGTGGACCTTCCACAATGAGCTTGGCCTTGTATTTGTTGCAGTGTATCAACGGATTCTTCATTTATTGTATGTGGATGACTTGCTTTCCATGGTGAAGCAGGGGTTTTCTGAGATATATGATCCAAAGCAGATGGTCTATGATGATTTTGATGAAACCTTTAGGCAACTTAGAATGGAGGCTGAGGCTCGTGCTAATGAGTTGAAAAATTCAAAGCAGGTGGGGAAGCCATTGAACAATGCCAGGAAGCAAGGGCAGGATCAAAAAACTGGATTTGGAGAAAACAAGAAAAGCAATAGTGGTTTGGCAGATGGAGGAGATGCTGAGCGTACAAAGGGACGTAAGTTGGAGAATGGTTGCTCCAATGGCGATCATGTTATAGAATCTAAACTGACAGCAGTCGTTAATGGAAAAGACAATGCAAGTTCCAATGTTGGGGCTTTTGATGTAAATAAACTTCAGAAGCTTAGGTCTAAAGGTGGGAAGAAAACTGATACTATAGCTAACAAGGGCTCCAAGGAAGAGTCAAAGAAAAAGGTAACAAAAAAGAATAGAGTTTGGGATGATAAACCTACTGAGGCAAAATTAGACTTCACAGATGCTGTGGGTGAGGAAGGGGACAACAACATCGAGGTTTTCGCAGCCGATCAGGGCCAAAGTATGATGGACAAAGAAGAGGTTTTTAGTAGTGACAGTGAGGAAGAAGAAGAAGATGAGGAAGGTGACAACGGTAGTAAGCCTGATGCAAAGAAGAAAGGATGGTTTTCATCTATGTTCCAGAGTATCTCAGGCAAGGCAAGTTTGGATAAGTCAGACCTGGAACCAGCTCTGAAAGCTCTCAAGGACAGGCTCATGACAAAGAATGTGGCTGAGGAGATAGCTGAGAAACTTTGTGAATCAGTAGCTGCTAGTCTCGAGGGAAAAAAGCTAGCTTCTTTCACGAGGATTTCTTCAACAGTGCAGGTGGCCTATTGGCTTCTGCAGCATAAAGTTAGTGTCATGATGGCCGCCTGCGATACATTTAGATCTGGAGCCGTGGAACAGCTTCGAACTCATGCTCGTAGACTTCAGATCCCTATATTTGAGAAGGGCTATGAGAAAGATCCTGCAATTGTAGCTAAAGAAGCAATCCAAGAGGCATCCCGAAATGGATCAGATGTGGTTCTTGTTGATACAGCTGGGAGAATGCAGGATAACGAACCACTCATGAGAGCTCTCTCAAAGCTTATCAACCTTAACAAACCGGATCTGGTCTTGTTCGTCGGGGAGGCCCTCGTCGGGAATGATGCCGTCGATCAACTTTCGAAGTTTAATCAGAAACTAGCTGATCTCTCAACTACACCCCAACCCAGACTGATTGATGGTATCTTGCTCACGAAGTTCGATACGATTGACGACAAGGTCGGAGCAGCATTGTCTATGGTTTACATATCGGGAGCACCGGTAATGTTCGTCGGCTGTGGACAGTCGTATACCGACCTGAAGAAACTCAATGTCAAATCGATCGTCAAAACGCTGATTAAATGA

Protein sequence

MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLKWTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEAEARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCSNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVTKKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK

Homology

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BLAST of Cp4.1LG11g08360 vs. ExPASy Swiss-Prot
Match: Q54ZR7 (Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum OX=44689 GN=srpra PE=3 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 9.3e-96
Identity = 243/637 (38.15%), Postives = 345/637 (54.16%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   I T+GG++LW+ KE    ++GSPI++LI+  LLEERS   S+  D    +Y+LK
Sbjct: 1   MLDSFTILTKGGIVLWS-KEFAK-IKGSPINSLIKKVLLEERSAETSFQID----SYSLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDP---KQMVYDDFDETFRQLR 120
           WTF NE  L+FV VYQ+I  LLY+++LL+ VK+ F ++Y     K     DF    +   
Sbjct: 61  WTFSNEFDLIFVVVYQKIFTLLYIEELLTTVKKRFIKMYKDLLLKLKESSDFIIVDKFQE 120

Query: 121 MEAEARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLE- 180
              E    +++N  ++ +  N+A K+ +D   G     + N      G  E+ K ++ E 
Sbjct: 121 FNFEVILEDVENRSKLQQTSNSAPKKYEDTDKGKLVKDQKNERAIKEGRVEKVKRKEQEK 180

Query: 181 ---------------NGCSNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGK 240
                          N  S+ D   +S  +   +G D+  ++ GA    +    R +   
Sbjct: 181 KEKAERRKQNKANNINDISSDDDSDDSDSS---SGSDSEENSNGATKNQQTDVARIENSG 240

Query: 241 KTDTIANKGSKEESKKKVTKKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMM 300
               + +   K+ S     KK R W+D     K    +A+    ++N      ++ Q   
Sbjct: 241 YKKKVKDTPDKQAS-SSTGKKARTWEDGKLSKK--ELEALNRSDNSNGTEIVREKIQKFN 300

Query: 301 DKEEVFSSDSEEEEEDEEGDNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKD 360
              +V SSD ++EEE           AK    F   F  ++G   +DK DLEP L   K 
Sbjct: 301 IDMDVSSSDDDDEEE-----------AKPVSGFMKYFNVLTGNRVIDKQDLEPILADFKL 360

Query: 361 RLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV---------------------- 420
            L  KNVA ++A+K+ +S+   LEGKKLA+F  ++S V                      
Sbjct: 361 HLTKKNVAPDVADKIVQSIGTGLEGKKLATFQGVTSVVKQQMEDTITRILTPKRNIDILR 420

Query: 421 ----------------------------QVAYWLLQHKVSVMMAACDTFRSGAVEQLRTH 480
                                       +V YWL  +    M+AACDTFRSGA+EQL+TH
Sbjct: 421 EVQAVKGKRPYSIVFSGVNGVGKSTNLAKVCYWLTANGYKCMLAACDTFRSGAIEQLKTH 480

Query: 481 ARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINL 540
           A RL + +FE+GY KD A VA++AI  A   G DVVL+DT GRMQ+NEPLM+ALSKL+N 
Sbjct: 481 ADRLNVHLFERGYSKDAASVAQDAIAFAKDTGYDVVLIDTTGRMQNNEPLMKALSKLVNQ 540

Query: 541 NKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQP--RLIDGILLTKFDTIDDKVGA 567
           N  DLVLFVGEALVGND VDQL+KF++ L+ L+ T Q   R IDGI+LTKFDTIDDKVGA
Sbjct: 541 NNVDLVLFVGEALVGNDGVDQLTKFDKSLSLLANTTQTHIRTIDGIILTKFDTIDDKVGA 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy Swiss-Prot
Match: Q9U5L1 (Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster OX=7227 GN=SrpRalpha PE=1 SV=2)

HSP 1 Score: 340.1 bits (871), Expect = 4.8e-92
Identity = 248/641 (38.69%), Postives = 349/641 (54.45%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+ ++IFT+GG++LW     GN+   S I++LIR  +LEER+  A Y Y+    A   K
Sbjct: 1   MLDFVVIFTKGGVVLWHSNASGNSF-ASCINSLIRGVILEERNTEAKY-YEEDHLAVQFK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYD-DFDETFRQLRME 120
               NEL LV+ A++Q+++ L Y+D  L+ ++  F E Y   ++  D DFD  +R++   
Sbjct: 61  --LDNELDLVYAAIFQKVIKLNYLDGFLADMQAAFKEKYGDIRLGDDYDFDREYRRVLSA 120

Query: 121 AEARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGC 180
           AE       ++KQV  P              + E++KS   +A     ++    K  N  
Sbjct: 121 AEE-----ASAKQVKAP---------KTMRSYNESQKSKKTVASMIQDDKKPVEKRVN-I 180

Query: 181 SNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSK--GGKKTDTIANKGSKEESKK 240
                  +S+ ++   G     S +    + K +KLR K    KKT    +K SK E   
Sbjct: 181 QEAPPPSKSQPSSPPTG-----SPMDKIIMEKRRKLREKLTPTKKTSPSDSKSSKPE--- 240

Query: 241 KVTKKNRVWDDKPTEAKLDFTDAVGEEGDN------NIEVFAADQGQSM-MDKEEVFSSD 300
           K  KK RVWD           D   +  D+      N E+    QG    +D E    +D
Sbjct: 241 KAGKKPRVWDLGGNSKDAALLDRSRDSPDDVQYQNINSELVGTMQGVIRDLDVESEDEAD 300

Query: 301 SEEEEEDEEGDNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAE 360
           +E+   + E +   +    K+G   S F+ I G  ++  +DL+PAL+ ++D L++KNVA 
Sbjct: 301 NEDASSEGEAEEQVQSKKGKRGGLLSYFKGIVGAKTMSLADLQPALEKMRDHLISKNVAS 360

Query: 361 EIAEKLCESVAASLEGKKLASFTRISSTV------------------------------- 420
           EIA KLC+SVAASL+GK++ +F  I+S V                               
Sbjct: 361 EIAAKLCDSVAASLDGKQMGTFDSIASQVKEALTESLVRILSPKRRIDIIRDALESKRNG 420

Query: 421 --------------------QVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRL---- 480
                               ++ +WL+++  +V++AACDTFR+GAVEQLRTH R L    
Sbjct: 421 RPYTIIFCGVNGVGKSTNLAKICFWLIENDFNVLIAACDTFRAGAVEQLRTHTRHLNALH 480

Query: 481 ---------QIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALS 540
                     + ++EKGY KD A +A EAI+ A     DVVLVDTAGRMQDNEPLMR+LS
Sbjct: 481 PAAKHDGRNMVQLYEKGYGKDAAGIAMEAIKFAHDTRVDVVLVDTAGRMQDNEPLMRSLS 540

Query: 541 KLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDK 568
           KLI +N PDLVLFVGEALVGN+AVDQL KFNQ LAD S+   P +IDGI+LTKFDTIDDK
Sbjct: 541 KLIKVNNPDLVLFVGEALVGNEAVDQLVKFNQSLADYSSNENPHIIDGIVLTKFDTIDDK 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy Swiss-Prot
Match: Q9DBG7 (Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 2.7e-87
Identity = 243/660 (36.82%), Postives = 335/660 (50.76%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   IF++GGL+LW  + + ++  G P++ LIRS LL+ER G  S+ ++    A TLK
Sbjct: 1   MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYD---------DFDE 120
           +   N+  LVFV  +Q+IL L YVD L+  V + F + Y  +              DF  
Sbjct: 61  YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 120

Query: 121 TFRQLRMEAEARA--------NELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD 180
            F +L  EAE  +         + ++S++  KP+ +  +   ++     +N K      +
Sbjct: 121 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKTKEKAKNNKKRGAKKE 180

Query: 181 GGDAERTKGRKLENGCSNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKT 240
           G D           G         ++ + +  G +N   +       K ++   K GK  
Sbjct: 181 GSD-----------GTLATSKTAPAEKSGLSAGPENGELSKEELIRRKREEFIQKHGKGL 240

Query: 241 DTIANKGSKEESKKKVTKKNRVWD----------DKPTEAKLDFTDAVGEEGDNNIEVFA 300
           D  +     +  K+K  K  RVW+          D  T       +A   E  N I    
Sbjct: 241 DKSSKSTKSDTPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSEDINLIR--G 300

Query: 301 ADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKK--KGWFSSMFQSISGKASLDKSD 360
              G  + D  +  SSD      DE     +KP A K   G    M + + G  SL + D
Sbjct: 301 TGPGGQLQDL-DCSSSD------DEGATQNTKPSATKGTLGGMFGMLKGLVGSKSLSRED 360

Query: 361 LEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV------------ 420
           +E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++STV            
Sbjct: 361 MESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQIL 420

Query: 421 ---------------------------------------QVAYWLLQHKVSVMMAACDTF 480
                                                  ++++WLL++  SV++AACDTF
Sbjct: 421 QPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDTF 480

Query: 481 RSGAVEQLRTHARRL-------------QIPIFEKGYEKDPAIVAKEAIQEASRNGSDVV 540
           R+GAVEQLRTH RRL              + +FEKGY KD A +A EAI  A   G DVV
Sbjct: 481 RAGAVEQLRTHTRRLTALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDVV 540

Query: 541 LVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTP 568
           LVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S   
Sbjct: 541 LVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMAQ 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy Swiss-Prot
Match: Q3MHE8 (Signal recognition particle receptor subunit alpha OS=Bos taurus OX=9913 GN=SRPRA PE=2 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.3e-86
Identity = 243/668 (36.38%), Postives = 340/668 (50.90%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   IF++GGL+LW  + + ++  G P++ LIRS LL+ER G  S+ ++    A TLK
Sbjct: 1   MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYD---------DFDE 120
           +   N+  LVFV  +Q+IL L YVD L+  V + F + Y  +              DF  
Sbjct: 61  YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 120

Query: 121 TFRQLRMEAEARA--------NELKNSKQVGKPLNN-ARKQGQDQKTGFGENKKSNSGLA 180
            F +L  EAE  +         + ++S++  KP+ +    +G+  K     NKK+     
Sbjct: 121 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNNKKNKGAKK 180

Query: 181 DGGD-------AERTKGRKLENGCSNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKL 240
           +G D       A   +   L  G  NG+ + + +                     K ++ 
Sbjct: 181 EGSDGPLATSKAAPAEKSGLPVGPENGEELSKEEQIR-----------------RKREEF 240

Query: 241 RSKGGKKTDTIANKGSKEESKKKVTKKNRVW--DDKPTEAKLDFT--------DAVGEEG 300
             K G+  +  +     +  K+K  K  RVW       +  LD++        +A   E 
Sbjct: 241 IQKHGRGMEKSSKSSKSDAPKEKGKKAPRVWALGGSANKEVLDYSTPTTNGAPEAAPPED 300

Query: 301 DNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKK--KGWFSSMFQSISG 360
            N I       G+ + D       D    +++    N +KP A K   G    M + + G
Sbjct: 301 INLIR--GTGPGRQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVG 360

Query: 361 KASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV---- 420
             SL + D+E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++STV    
Sbjct: 361 SKSLTREDMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQAL 420

Query: 421 -----------------------------------------------QVAYWLLQHKVSV 480
                                                          ++++WLL++  SV
Sbjct: 421 QESLVQILQPQRRVDMLRDIMDAQRHQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSV 480

Query: 481 MMAACDTFRSGAVEQLRTHARRL-------------QIPIFEKGYEKDPAIVAKEAIQEA 540
           ++AACDTFR+GAVEQLRTH RRL              + +FEKGY KD A +A EAI  A
Sbjct: 481 LIAACDTFRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFA 540

Query: 541 SRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQK 568
              G DVVLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ 
Sbjct: 541 RNQGFDVVLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRA 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy Swiss-Prot
Match: P08240 (Signal recognition particle receptor subunit alpha OS=Homo sapiens OX=9606 GN=SRPRA PE=1 SV=2)

HSP 1 Score: 318.5 bits (815), Expect = 1.5e-85
Identity = 241/661 (36.46%), Postives = 337/661 (50.98%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           ML+   IF++GGL+LW  + + ++  G P++ LIRS LL+ER G  S+ ++    A TLK
Sbjct: 1   MLDFFTIFSKGGLVLWCFQGVSDSCTG-PVNALIRSVLLQERGGNNSFTHE----ALTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYD---------DFDE 120
           +   N+  LVFV  +Q+IL L YVD L+  V + F + Y  +              DF  
Sbjct: 61  YKLDNQFELVFVVGFQKILTLTYVDKLIDDVHRLFRDKYRTEIQQQSALSLLNGTFDFQN 120

Query: 121 TFRQLRMEAEARA--------NELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD 180
            F +L  EAE  +         + ++S++  KP+ +  +   ++     +N K      +
Sbjct: 121 DFLRLLREAEESSKIRAPTTMKKFEDSEKAKKPVRSMIETRGEKPKEKAKNSKKKGAKKE 180

Query: 181 GGDAERTKGRKLENGCSNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKT 240
           G D      +           V   K    V  ++    +       K ++   K G+  
Sbjct: 181 GSDGPLATSKP----------VPAEKSGLPVGPENGVELSKEELIRRKREEFIQKHGRGM 240

Query: 241 DTIANKGSKEES-KKKVTKKNRVWD----------DKPTEAKLDFTDAVGEEGDNNIEVF 300
           +  +NK +K ++ K+K  K  RVW+          D  T       +A   E  N I   
Sbjct: 241 EK-SNKSTKSDAPKEKGKKAPRVWELGGCANKEVLDYSTPTTNGTPEAALSEDINLIR-- 300

Query: 301 AADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKK--KGWFSSMFQSISGKASLDKS 360
               G  + D       D    +++    N +KP A K   G    M + + G  SL + 
Sbjct: 301 GTGSGGQLQD------LDCSSSDDEGAAQNSTKPSATKGTLGGMFGMLKGLVGSKSLSRE 360

Query: 361 DLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV----------- 420
           D+E  L  ++D L+ KNVA +IA +LCESVA  LEGK + +F+ ++STV           
Sbjct: 361 DMESVLDKMRDHLIAKNVAADIAVQLCESVANKLEGKVMGTFSTVTSTVKQALQESLVQI 420

Query: 421 ----------------------------------------QVAYWLLQHKVSVMMAACDT 480
                                                   ++++WLL++  SV++AACDT
Sbjct: 421 LQPQRRVDMLRDIMDAQRRQRPYVVTFCGVNGVGKSTNLAKISFWLLENGFSVLIAACDT 480

Query: 481 FRSGAVEQLRTHARRL-------------QIPIFEKGYEKDPAIVAKEAIQEASRNGSDV 540
           FR+GAVEQLRTH RRL              + +FEKGY KD A +A EAI  A   G DV
Sbjct: 481 FRAGAVEQLRTHTRRLSALHPPEKHGGRTMVQLFEKGYGKDAAGIAMEAIAFARNQGFDV 540

Query: 541 VLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTT 568
           VLVDTAGRMQDN PLM AL+KLI +N PDLVLFVGEALVGN+AVDQL KFN+ LAD S  
Sbjct: 541 VLVDTAGRMQDNAPLMTALAKLITVNTPDLVLFVGEALVGNEAVDQLVKFNRALADHSMA 600

[Close]

BLAST of Cp4.1LG11g08360 vs. NCBI nr
Match: XP_023546776.1 (signal recognition particle receptor subunit alpha-like [Cucurbita pepo subsp. pepo] >XP_023546777.1 signal recognition particle receptor subunit alpha-like [Cucurbita pepo subsp. pepo] >XP_023546778.1 signal recognition particle receptor subunit alpha-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1056 bits (2731), Expect = 0.0
Identity = 567/618 (91.75%), Postives = 567/618 (91.75%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT
Sbjct: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. NCBI nr
Match: KAG7030089.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1048 bits (2709), Expect = 0.0
Identity = 564/618 (91.26%), Postives = 565/618 (91.42%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENG S
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEV AADQGQSMMDKEEVFSSDSEEEEEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. NCBI nr
Match: XP_022946538.1 (signal recognition particle receptor subunit alpha-like [Cucurbita moschata] >XP_022946539.1 signal recognition particle receptor subunit alpha-like [Cucurbita moschata] >XP_022946540.1 signal recognition particle receptor subunit alpha-like [Cucurbita moschata])

HSP 1 Score: 1041 bits (2693), Expect = 0.0
Identity = 561/618 (90.78%), Postives = 563/618 (91.10%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSE YDPKQMVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEKYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENG S
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGK+TDTIANKGSKEESKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKRTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEV AADQGQSMMDKEEVFSSDSEEEEEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. NCBI nr
Match: KAG6599145.1 (Signal recognition particle receptor subunit alpha-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1010 bits (2611), Expect = 0.0
Identity = 545/599 (90.98%), Postives = 546/599 (91.15%), Query Frame = 0


Query: 20  ELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLKWTFHNELGLVFVAVYQRIL 79
           ELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLKWTFHNELGLVFVAVYQRIL
Sbjct: 227 ELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLKWTFHNELGLVFVAVYQRIL 286

Query: 80  HLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEAEARANELKNSKQVGKPLNN 139
           HLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEAEARANELKNSKQVGKPLNN
Sbjct: 287 HLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEAEARANELKNSKQVGKPLNN 346

Query: 140 ARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCSNGDHVIESKLTAVVNGKDN 199
           ARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENG SNG+HVIESKLTAVVNGKDN
Sbjct: 347 ARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYSNGNHVIESKLTAVVNGKDN 406

Query: 200 ASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVTKKNRVWDDKPTEAKLDFTD 259
           ASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVTKKNRVWDDKPTEAKLDFTD
Sbjct: 407 ASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVTKKNRVWDDKPTEAKLDFTD 466

Query: 260 AVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKKKGWFSSMFQ 319
           AVGEEGDNNIEV AADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKKKGWFSSMFQ
Sbjct: 467 AVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEGDNGSKPDAKKKGWFSSMFQ 526

Query: 320 SISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV 379
           SISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV
Sbjct: 527 SISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTV 586

Query: 380 Q---------------------------------------------------VAYWLLQH 439
           Q                                                   VAYWLLQH
Sbjct: 587 QAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGVNGVGKSTNLAKVAYWLLQH 646

Query: 440 KVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVL 499
           KVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVL
Sbjct: 647 KVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVL 706

Query: 500 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQ 559
           VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQ
Sbjct: 707 VDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQ 766

Query: 560 PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK 567
           PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK
Sbjct: 767 PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLIK 825

[Close]

BLAST of Cp4.1LG11g08360 vs. NCBI nr
Match: XP_008452777.1 (PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis melo] >XP_008452784.1 PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis melo] >XP_016902096.1 PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis melo] >KAA0056108.1 signal recognition particle receptor subunit alpha-like protein [Cucumis melo var. makuwa] >TYJ96409.1 signal recognition particle receptor subunit alpha-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 1008 bits (2607), Expect = 0.0
Identity = 541/618 (87.54%), Postives = 555/618 (89.81%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSEIYDPK+MVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELK +KQVGKPLNN+RKQGQDQKTGFGENKKSNSGLAD GDAERTKG KLENG S
Sbjct: 121 EARANELKKTKQVGKPLNNSRKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGK+N SSNVGAFDVNKLQKLRSKGGKKTDT+ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNIEV AADQGQSMMDKEEVFSSDSE+EE DEEG
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEE-DEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D G+KPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DKGTKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           +VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 VVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy TrEMBL
Match: A0A6J1G455 (signal recognition particle receptor subunit alpha-like OS=Cucurbita moschata OX=3662 GN=LOC111450574 PE=3 SV=1)

HSP 1 Score: 1041 bits (2693), Expect = 0.0
Identity = 561/618 (90.78%), Postives = 563/618 (91.10%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSE YDPKQMVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEKYDPKQMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENG S
Sbjct: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGK+TDTIANKGSKEESKKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKRTDTIANKGSKEESKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEV AADQGQSMMDKEEVFSSDSEEEEEDEEG
Sbjct: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVLAADQGQSMMDKEEVFSSDSEEEEEDEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA
Sbjct: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy TrEMBL
Match: A0A1S4E1J4 (signal recognition particle receptor subunit alpha homolog OS=Cucumis melo OX=3656 GN=LOC103493693 PE=3 SV=1)

HSP 1 Score: 1008 bits (2607), Expect = 0.0
Identity = 541/618 (87.54%), Postives = 555/618 (89.81%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSEIYDPK+MVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELK +KQVGKPLNN+RKQGQDQKTGFGENKKSNSGLAD GDAERTKG KLENG S
Sbjct: 121 EARANELKKTKQVGKPLNNSRKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGK+N SSNVGAFDVNKLQKLRSKGGKKTDT+ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNIEV AADQGQSMMDKEEVFSSDSE+EE DEEG
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEE-DEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D G+KPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DKGTKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           +VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 VVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy TrEMBL
Match: A0A5A7ULZ3 (Signal recognition particle receptor subunit alpha-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00360 PE=3 SV=1)

HSP 1 Score: 1008 bits (2607), Expect = 0.0
Identity = 541/618 (87.54%), Postives = 555/618 (89.81%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSEIYDPK+MVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EARANELK +KQVGKPLNN+RKQGQDQKTGFGENKKSNSGLAD GDAERTKG KLENG S
Sbjct: 121 EARANELKKTKQVGKPLNNSRKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGK+N SSNVGAFDVNKLQKLRSKGGKKTDT+ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDTVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNIEV AADQGQSMMDKEEVFSSDSE+EE DEEG
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIEVLAADQGQSMMDKEEVFSSDSEDEE-DEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D G+KPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DKGTKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           +VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 VVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy TrEMBL
Match: A0A0A0LK35 (SRP54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035520 PE=3 SV=1)

HSP 1 Score: 1006 bits (2600), Expect = 0.0
Identity = 540/618 (87.38%), Postives = 553/618 (89.48%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSEIYDPK+MVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGCS 180
           EAR NELK +KQVGKPLNNARKQGQDQKTGFGENKKSNSGLAD GDAERTKG KLENG S
Sbjct: 121 EARTNELKKTKQVGKPLNNARKQGQDQKTGFGENKKSNSGLADDGDAERTKGHKLENGYS 180

Query: 181 NGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKVT 240
           NG+HVIESKLTAVVNGK+N SSNVGAFDVNKLQKLRSKGGKKTD +ANKGSKEE KKKVT
Sbjct: 181 NGNHVIESKLTAVVNGKENTSSNVGAFDVNKLQKLRSKGGKKTDPVANKGSKEEPKKKVT 240

Query: 241 KKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEEG 300
           KKNRVWD+KPTEAKLDFTD VGE GDNNI+V AADQGQSMMDKEEVFSSDSE+EE DEEG
Sbjct: 241 KKNRVWDEKPTEAKLDFTDPVGENGDNNIDVLAADQGQSMMDKEEVFSSDSEDEE-DEEG 300

Query: 301 DNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCESV 360
           D GSKPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCESV
Sbjct: 301 DKGSKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCESV 360

Query: 361 AASLEGKKLASFTRISSTVQ---------------------------------------- 420
           AASLEGKKLASFTRISSTVQ                                        
Sbjct: 361 AASLEGKKLASFTRISSTVQAAMEEALVRILTPRRSIDILRDVHAAKEQKKPYVVVFVGV 420

Query: 421 -----------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480
                      VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA
Sbjct: 421 NGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPA 480

Query: 481 IVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDA 540
           +VAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN PDLVLFVGEALVGNDA
Sbjct: 481 VVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGNDA 540

Query: 541 VDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 567
           VDQLSKFNQKLADLST+P+PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS
Sbjct: 541 VDQLSKFNQKLADLSTSPEPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. ExPASy TrEMBL
Match: A0A6J1FHC5 (signal recognition particle receptor subunit alpha-like OS=Cucurbita moschata OX=3662 GN=LOC111444158 PE=3 SV=1)

HSP 1 Score: 988 bits (2554), Expect = 0.0
Identity = 534/619 (86.27%), Postives = 551/619 (89.01%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKELGNAL+GSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKELGNALKGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHNELGLVFVAVYQRILHLLYVDDLL+MVKQGFSEIYDPK+MVYDDFDETFRQLRMEA
Sbjct: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLAMVKQGFSEIYDPKRMVYDDFDETFRQLRMEA 120

Query: 121 EARANELKNSKQVG-KPLNNARKQGQDQKTGFGENKKSNSGLADGGDAERTKGRKLENGC 180
           EARA+ELK SKQV  KP+NNARKQGQDQKTGFGENKKSNSGLADGGD+ERTK  +LENG 
Sbjct: 121 EARASELKRSKQVAVKPVNNARKQGQDQKTGFGENKKSNSGLADGGDSERTKSHQLENGY 180

Query: 181 SNGDHVIESKLTAVVNGKDNASSNVGAFDVNKLQKLRSKGGKKTDTIANKGSKEESKKKV 240
           SNG+ VIESKLTAVVNGK+NASSNVGAFDVNKLQKLRSKGGKKT+T+ NKGSKEESKKKV
Sbjct: 181 SNGNRVIESKLTAVVNGKENASSNVGAFDVNKLQKLRSKGGKKTETVVNKGSKEESKKKV 240

Query: 241 TKKNRVWDDKPTEAKLDFTDAVGEEGDNNIEVFAADQGQSMMDKEEVFSSDSEEEEEDEE 300
           TKKNRVWD+KP EAKLDFTD VGE G+NNIEV AADQGQSMMDKEEVFSSDSE+EE DEE
Sbjct: 241 TKKNRVWDEKPVEAKLDFTDPVGENGENNIEVLAADQGQSMMDKEEVFSSDSEDEE-DEE 300

Query: 301 GDNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRLMTKNVAEEIAEKLCES 360
           G  GSKPDAKKKGWFSSMFQSISGKASLDK+DLEPALKALKDRLMTKNVAEEIAEKLCES
Sbjct: 301 GSQGSKPDAKKKGWFSSMFQSISGKASLDKADLEPALKALKDRLMTKNVAEEIAEKLCES 360

Query: 361 VAASLEGKKLASFTRISSTVQ--------------------------------------- 420
           VAASLEGKKLASFTRISSTVQ                                       
Sbjct: 361 VAASLEGKKLASFTRISSTVQNAMEEALVRILTPRRSIDILRDVHTAQEQKKPYVVVFVG 420

Query: 421 ------------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP 480
                       VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP
Sbjct: 421 VNGVGKSTNLAKVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDP 480

Query: 481 AIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGND 540
           AIVAKEAIQEASRNGS+VVLVDTAGRMQDNEPLMRALSKLINLN PDLVLFVGEALVGND
Sbjct: 481 AIVAKEAIQEASRNGSEVVLVDTAGRMQDNEPLMRALSKLINLNSPDLVLFVGEALVGND 540

Query: 541 AVDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQ 567
           AVDQLSKFNQKLADLST+P PRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQ
Sbjct: 541 AVDQLSKFNQKLADLSTSPNPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQ 600

[Close]

BLAST of Cp4.1LG11g08360 vs. TAIR 10
Match: AT4G30600.1 (signal recognition particle receptor alpha subunit family protein )

HSP 1 Score: 809.3 bits (2089), Expect = 2.0e-234
Identity = 454/635 (71.50%), Postives = 506/635 (79.69%), Query Frame = 0


Query: 1   MLEQLLIFTRGGLILWTCKELGNALRGSPIDTLIRSCLLEERSGAASYNYDAPGAAYTLK 60
           MLEQLLIFTRGGLILWTCKE+GNAL+GSPIDTLIRSCLLEERSGA S+NYDAPGAAYTLK
Sbjct: 1   MLEQLLIFTRGGLILWTCKEIGNALKGSPIDTLIRSCLLEERSGAVSFNYDAPGAAYTLK 60

Query: 61  WTFHNELGLVFVAVYQRILHLLYVDDLLSMVKQGFSEIYDPKQMVYDDFDETFRQLRMEA 120
           WTFHN+LGLVFVAVYQRILHLLYVDDLLSMVKQ FSE+YDPK+M YDDFDETFRQLR+EA
Sbjct: 61  WTFHNDLGLVFVAVYQRILHLLYVDDLLSMVKQSFSEVYDPKRMAYDDFDETFRQLRIEA 120

Query: 121 EARANELKNSKQVGKPLNNARKQGQDQKTGF-GENKK----SNSGLADGGDAERTKGRKL 180
           EARA EL+ +KQVGKP+ + +KQGQ  K G  G NK+      S   DG    + K   L
Sbjct: 121 EARAEELRKTKQVGKPVTSVKKQGQVSKPGLEGGNKRVSSEGGSKKDDGDGGNKAKVSTL 180

Query: 181 ENGCSNGDHVIE---SKLTAVVNGKDNASSNVGAFDVNKLQKLRSK------GGKKTDTI 240
            NG SNG+H +E    +   + NGK+N SSNV A D++KLQKLRSK      G +KTD+I
Sbjct: 181 TNGHSNGNHQMEDDSQETNDLANGKENTSSNV-AVDLSKLQKLRSKGVRGRGGVRKTDSI 240

Query: 241 ANKGSK-EESKKKVTKKNRVWDD-KPTEAKLDFTDAVGEEGDN-NIEVFAADQGQSMMDK 300
            NK SK  E  KK TKKNRVWDD  P ++KLDFTD++ E G+N ++++ AADQG+SMMDK
Sbjct: 241 GNKSSKVAEPAKKATKKNRVWDDAAPKQSKLDFTDSIDENGNNDHVDIVAADQGESMMDK 300

Query: 301 EEVFSSDSEEEEEDEEGDNGSKPDAKKKGWFSSMFQSISGKASLDKSDLEPALKALKDRL 360
           EEVFSSDSE E++DE G +     AKKKGWFSS+FQSI+GKA+L+++DL PALKALK+RL
Sbjct: 301 EEVFSSDSESEDDDEPGSDEKPAQAKKKGWFSSVFQSITGKANLERTDLGPALKALKERL 360

Query: 361 MTKNVAEEIAEKLCESVAASLEGKKLASFTRISSTVQ----------------------- 420
           MTKNVAEEIAEKLCESV ASLEGKKL+SFTRISSTVQ                       
Sbjct: 361 MTKNVAEEIAEKLCESVEASLEGKKLSSFTRISSTVQAAMEDALVRILTPRRSIDILRDV 420

Query: 421 ----------------------------VAYWLLQHKVSVMMAACDTFRSGAVEQLRTHA 480
                                       VAYWL QHKVSVMMAACDTFRSGAVEQLRTHA
Sbjct: 421 HAAKEQRKPYVVVFVGVNGVGKSTNLAKVAYWLQQHKVSVMMAACDTFRSGAVEQLRTHA 480

Query: 481 RRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN 540
           RRLQIPIFEKGYEKDPA+VAKEAIQEA+RNGSDVVLVDTAGRMQDNEPLMRALSKLINLN
Sbjct: 481 RRLQIPIFEKGYEKDPAVVAKEAIQEATRNGSDVVLVDTAGRMQDNEPLMRALSKLINLN 540

Query: 541 KPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALS 568
           +PDLVLFVGEALVGNDAVDQLSKFNQKL+DLST+  PRLIDGILLTKFDTIDDKVGAALS
Sbjct: 541 QPDLVLFVGEALVGNDAVDQLSKFNQKLSDLSTSGNPRLIDGILLTKFDTIDDKVGAALS 600

[Close]

BLAST of Cp4.1LG11g08360 vs. TAIR 10
Match: AT1G48900.1 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-21
Identity = 65/236 (27.54%), Postives = 114/236 (48.31%), Query Frame = 0


Query: 340 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFT---------RISSTVQVAYWLLQHKV 399
           K R++ + +  E+ + L     A    K  AS           + ++  + AY+  +   
Sbjct: 71  KRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGY 130

Query: 400 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVD 459
              +   DTFR+GA +QL+ +A + +IP +    E DP  +A E +    +   D+++VD
Sbjct: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVD 190

Query: 460 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQPR 519
           T+GR +    L   + ++    KPDLV+FV ++ +G  A DQ   F Q +A         
Sbjct: 191 TSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA--------- 250

Query: 520 LIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLI 567
            +  +++TK D    K G ALS V  + +PV+F+G G+   + +  +VK  V  L+
Sbjct: 251 -VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295

[Close]

BLAST of Cp4.1LG11g08360 vs. TAIR 10
Match: AT1G48900.2 (Signal recognition particle, SRP54 subunit protein )

HSP 1 Score: 101.3 bits (251), Expect = 2.6e-21
Identity = 65/236 (27.54%), Postives = 114/236 (48.31%), Query Frame = 0


Query: 340 KDRLMTKNVAEEIAEKLCESVAASLEGKKLASFT---------RISSTVQVAYWLLQHKV 399
           K R++ + +  E+ + L     A    K  AS           + ++  + AY+  +   
Sbjct: 71  KRRIIEQAIFSELCKMLDPGKPAFAPKKAKASVVMFVGLQGAGKTTTCTKYAYYHQKKGY 130

Query: 400 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVD 459
              +   DTFR+GA +QL+ +A + +IP +    E DP  +A E +    +   D+++VD
Sbjct: 131 KPALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAVEGVDTFKKENCDLIIVD 190

Query: 460 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQPR 519
           T+GR +    L   + ++    KPDLV+FV ++ +G  A DQ   F Q +A         
Sbjct: 191 TSGRHKQEASLFEEMRQVAEATKPDLVIFVMDSSIGQAAFDQAQAFKQSVA--------- 250

Query: 520 LIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLKKLNVKSIVKTLI 567
            +  +++TK D    K G ALS V  + +PV+F+G G+   + +  +VK  V  L+
Sbjct: 251 -VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEFEVFDVKPFVSRLL 295

[Close]

BLAST of Cp4.1LG11g08360 vs. TAIR 10
Match: AT5G03940.1 (chloroplast signal recognition particle 54 kDa subunit )

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-20
Identity = 70/224 (31.25%), Postives = 117/224 (52.23%), Query Frame = 0


Query: 341 DRLMTKNVAEEIAEKLCESVAASLEGKK-------LASFTRISST---VQVAYWLLQHKV 400
           D+ + K V +E+  KL     + L+  K       LA    +  T    ++A +L +   
Sbjct: 147 DQQLVKIVHDELV-KLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLACYLKKQGK 206

Query: 401 SVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEASRNGSDVVLVD 460
           S M+ A D +R  A++QL     ++ +P++  G +  PA +AK+ ++EA +N  DVV++D
Sbjct: 207 SCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDVVIMD 266

Query: 461 TAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQLSKFNQKLADLSTTPQPR 520
           TAGR+Q ++ +M  L  +     P  VL V +A+ G +A   ++ FN ++          
Sbjct: 267 TAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIG--------- 326

Query: 521 LIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDLK 555
            I G +LTK D  D + GAALS+  +SG P+  VG G+   DL+
Sbjct: 327 -ITGAILTKLDG-DSRGGAALSVKEVSGKPIKLVGRGERMEDLE 358

[Close]

BLAST of Cp4.1LG11g08360 vs. TAIR 10
Match: AT1G15310.1 (signal recognition particle 54 kDa subunit )

HSP 1 Score: 97.1 bits (240), Expect = 5.0e-20
Identity = 53/193 (27.46%), Postives = 100/193 (51.81%), Query Frame = 0


Query: 374 RISSTVQVAYWLLQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAK 433
           + ++  + AY+  +      +   DTFR+GA +QL+ +A + +IP +    E DP  +A 
Sbjct: 114 KTTTCTKYAYYHQKKGYKAALVCADTFRAGAFDQLKQNATKAKIPFYGSYTESDPVKIAV 173

Query: 434 EAIQEASRNGSDVVLVDTAGRMQDNEPLMRALSKLINLNKPDLVLFVGEALVGNDAVDQL 493
           E +    +   D+++VDT+GR +    L   + ++    +PDLV+FV ++ +G  A +Q 
Sbjct: 174 EGVDRFKKEKCDLIIVDTSGRHKQAASLFEEMRQVAEATEPDLVIFVMDSSIGQAAFEQA 233

Query: 494 SKFNQKLADLSTTPQPRLIDGILLTKFDTIDDKVGAALSMVYISGAPVMFVGCGQSYTDL 553
             F + ++          +  +++TK D    K G ALS V  + +PV+F+G G+   + 
Sbjct: 234 EAFKETVS----------VGAVIITKMDG-HAKGGGALSAVAATKSPVIFIGTGEHMDEF 293

Query: 554 KKLNVKSIVKTLI 567
           +  +VK  V  L+
Sbjct: 294 EVFDVKPFVSRLL 295

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ZR7	9.3e-96	38.15	Signal recognition particle receptor subunit alpha OS=Dictyostelium discoideum O...	[more]
Q9U5L1	4.8e-92	38.69	Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanog...	[more]
Q9DBG7	2.7e-87	36.82	Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=S...	[more]
Q3MHE8	2.3e-86	36.38	Signal recognition particle receptor subunit alpha OS=Bos taurus OX=9913 GN=SRPR...	[more]
P08240	1.5e-85	36.46	Signal recognition particle receptor subunit alpha OS=Homo sapiens OX=9606 GN=SR...	[more]

BLAST of Cp4.1LG11g08360 vs. NCBI nr


Match Name	Identity	Description
XP_023546776.1	91.75	signal recognition particle receptor subunit alpha-like [Cucurbita pepo subsp. p...	[more]
KAG7030089.1	91.26	Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb...	[more]
XP_022946538.1	90.78	signal recognition particle receptor subunit alpha-like [Cucurbita moschata] >XP...	[more]
KAG6599145.1	90.98	Signal recognition particle receptor subunit alpha-like protein, partial [Cucurb...	[more]
XP_008452777.1	87.54	PREDICTED: signal recognition particle receptor subunit alpha homolog [Cucumis m...	[more]

BLAST of Cp4.1LG11g08360 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1G455	90.78	signal recognition particle receptor subunit alpha-like OS=Cucurbita moschata OX...	[more]
A0A1S4E1J4	87.54	signal recognition particle receptor subunit alpha homolog OS=Cucumis melo OX=36...	[more]
A0A5A7ULZ3	87.54	Signal recognition particle receptor subunit alpha-like protein OS=Cucumis melo ...	[more]
A0A0A0LK35	87.38	SRP54 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G035520 PE=3 ...	[more]
A0A6J1FHC5	86.27	signal recognition particle receptor subunit alpha-like OS=Cucurbita moschata OX...	[more]

BLAST of Cp4.1LG11g08360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30600.1	2.0e-234	71.50	signal recognition particle receptor alpha subunit family protein	[more]
AT1G48900.1	2.6e-21	27.54	Signal recognition particle, SRP54 subunit protein	[more]
AT1G48900.2	2.6e-21	27.54	Signal recognition particle, SRP54 subunit protein	[more]
AT5G03940.1	1.0e-20	31.25	chloroplast signal recognition particle 54 kDa subunit	[more]
AT1G15310.1	5.0e-20	27.46	signal recognition particle 54 kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	SMART	SM00962	SRP54_3	coord: 377..567 e-value: 1.2E-60 score: 217.5
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PFAM	PF00448	SRP54	coord: 378..566 e-value: 4.9E-46 score: 156.8
IPR000897	Signal recognition particle, SRP54 subunit, GTPase domain	PROSITE	PS00300	SRP54	coord: 540..553
IPR007222	Signal recognition particle receptor, alpha subunit, N-terminal	PFAM	PF04086	SRP-alpha_N	coord: 28..296 e-value: 1.6E-68 score: 231.8
IPR013822	Signal recognition particle SRP54, helical bundle	PFAM	PF02881	SRP54_N	coord: 314..379 e-value: 2.5E-8 score: 34.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 380..567 e-value: 3.1E-77 score: 261.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 378..565
None	No IPR available	GENE3D	3.30.450.60		coord: 1..125 e-value: 1.4E-38 score: 133.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..301
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..156
None	No IPR available	PANTHER	PTHR43134:SF10	BNAA01G06530D PROTEIN	coord: 380..567
None	No IPR available	PANTHER	PTHR43134	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	coord: 1..382
None	No IPR available	PANTHER	PTHR43134	SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA	coord: 380..567
None	No IPR available	PANTHER	PTHR43134:SF10	BNAA01G06530D PROTEIN	coord: 1..382
None	No IPR available	CDD	cd14826	SR_alpha_SRX	coord: 3..116 e-value: 5.97532E-45 score: 152.742
None	No IPR available	CDD	cd17876	SRalpha_C	coord: 381..565 e-value: 8.61492E-129 score: 373.103
IPR042101	Signal recognition particle SRP54, N-terminal domain superfamily	GENE3D	1.20.120.140		coord: 278..379 e-value: 3.8E-19 score: 70.8
IPR036225	SRP/SRP receptor, N-terminal	SUPERFAMILY	47364	Domain of the SRP/SRP receptor G-proteins	coord: 312..380
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08360.1	Cp4.1LG11g08360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006614	SRP-dependent cotranslational protein targeting to membrane
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0005785	signal recognition particle receptor complex
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005047	signal recognition particle binding