Cp4.1LG11g08140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g08140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionCX9C domain-containing protein
LocationCp4.1LG11: 6566258 .. 6570335 (-)
RNA-Seq ExpressionCp4.1LG11g08140
SyntenyCp4.1LG11g08140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAAAAACCCTACGCACCCTGCTTTTCTCTCCAACGCGAAGTTCTCTGCCATTTCTCCTTCCTTCCTCTGACTGCCCTCTTCTTGAAACCCCGCCTCCGGCGAGCAGAGCCCATTAGCGGCGCGGCGTCACATCTCGATCTGGTCTCTCTCTCTCTCTCGAGACTTCTCTCCGGCGACTACACGCCCTTATTTATCCACGACTTCAGTTCTCTTCAGACCCGAAACCCACACTTCGTAAAAACCAGATCCGAAGTGGGAATTCTCTCTAAATCTGAATCGGAATTTCGGTTGGTATAAGCTTCTTTGAGCTTCTTAAGGTCGTTTCATTTAATTTAGTTTACTTTCGATCTACTTTTAACCCTTGGAAAGTTTCCCTGATTGTTGCGATTCGATTTAGGAGCGCTTAGTAAAGTAAGTAATCCTTAGATGTGAGGCTTCTTGTTATCTAAGTTTCGTTATGTTTGTGACTGAACTGTTTTATAAATTATGGATGTTATTGAATAATATTGTTAGCATGGTTCCTTTCAGAATGTTTTTGGTATTATTGTTGTACTAGATAGGTGTTGTTGTTGATCATTATGTGGTATAGTGTGCTGGATTCTTCATGTGTGGTTGTGCCATGTTGGGTGACATATTAATTAATTTCTATACGTTGGGAGTTTGCTGACATGTTGAGTGTTCTCTGAAATGGATACTTGAGTATTTGGTTGAAAGCGTATTATAGGAGTTGGGTTGTGAGTACTGAAATTATTGTGGATGAATTAAGAGAAGCATGTGAATATCAGTTGGGTAATATGGTCAAGGATTGATATGTCACTTGTGGTATTGAGGAATTGTGTATAAATGATCGAGGGCCAAATTAAGGAATGGCATTGGGGTTTTAGGCGTAATGGTCAAGAATCGATGGAGTGAGAAATGTGGCATTAGACCTTGGGTATAAATGGTTAAGAGCCGATGTGGGTAGATTCGAGGTCTTGGGTATGAATGGTCAACGGTTGAACTACCCAGAAAAGAGTTTAGAGATTTAGTAGTGAGGTATTGTGTAAATGGCTAAGGATCACTATGTTTGAAAAGGGTGTTGTAGTAGAGAGTTGATAGAGGTCGATAAAGTTAGAAGTTTTGAGCTGATGAAATTGCAAAGATGGATCCTGAGAGCTGCCATCCTATGGTGACTGAATATGGAAAATGTAATGTGTTCAATAAAGCTTAGTACCGCTGTTGTGTACGTTACTTGTTCATGCTTTTGATTAAGTTAAGCATGAGATTGTGCTAATTGTTGATATGAGACATGTATCTTTCTTGACTATGTATGAACTTTGTGTTACGGTGACTTATTAACGGTTAATGTAATATGCATGTTCTGGTGATTTTGTACTTGTGGTGGTGCAATACTGGTGCCTGTTTCCTCGAGTAGAGATTACTTACTGGGGTATACACTTACTATTTTTTTTTCCCAAAACATCATATTTTTTTAGTTGATGCTGAACCTCGCGACTTTGGTAATGATAAGAAGGAGATGTGAGAGAAGACTTTTGATTTTGTGGGCATTATTCTGGCATTTTATAATAGTGGCCAAGAGTTTGTTTTTTTGGTTTATCAATCGTATCTTGTTTGCCTTAGTATGGTTTGGAATGAGATAAGGGTGATGGACCGTAACCTTCCTCTGTACTCATTTTGAAGTTTTGGAGGCATTACACTTTTAAGAGTTTGAGTAGTGGAGGGAAGGTTATTTGGGTGTACCCTTTGAAGTTTGTGACAGATAGGTCGAAGCATGGAGGCCACCTATTTAGGATTTAGTATCATACGAGTACAATTGATAGAAGGTTTTAATGCTTACTTGGATCAATAAGCAAACTCAGCAGCTTTTTTTAGAAAATCTTCCTCCTGCAATCTCGAGCAATGTCAAAAAGTCATTACTTGTAGGAGCAAAGCCGAGGGTAAAGCGACTCCTGTGACTACTCAATCAATTAGCATAAACTCCTTTGGTACCCTAATGTTGTAGGCTCAATAGTTGTCCCATGAGTGCAAAATGACCTTAACATTCATGATATTAGAAATAAAAAAATGAAAGAAAAAGAAGTTGAAGGAGGCTGCAGAAAGCCTTCCATAAAAGTCACTGAAAGTTAAGGACAATCAAGTAGGTCTTCTCCCATAGGAACGAACCATCACGGTGTTTATCCCCCATGCCTTCATGCTTCACAAATCTCTGCCCCCATAGGTGTACGGTTGAAAGACTTTTTCATCTTGAGGGCATGATTTGTAATAGCTCAAGCCCTCCGCTAATGTCCTTTGAGTTTTCCTTTTCGGGCTTCCCCCCAAAGTTTTTAAAACACCTCTACTAGGGAGAGGTTTCCACACCCTTGTAAAGAATTTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACAATCCATTCGCTTTCGGGGCCCAATGTCCTCACTGGCACTCATTCCCTTCTCCAATTGACGTGGGACCCCCCAATTCACCCCCTTCGGGGCCCAACATCCTTGTTGGCACACCGCCTCATGTCCACCCCCTTCGGGGCTCAGCCTCCTCGTTGGCACATCGGCCGGTGTTTGGCTTTGATACCATTTGTAATGCCCAAGTCCACCCGCTAACAGATATTGTCCTCTTTGGGCTTTCCCTTCGGGCTTCCATAATGGTTTTTAAAACGTGTCTGCTAAGGAGAGATCCACACCCTTATAAAGAGTGCTTCGTTCCCCTCTCCAACGAATGTGAGATCTCACATGATTATCATTTAACAACACTTGTGGTTGAGAGAGAGAGAATGGACTGTGAAACAGTAGAAGCTAGAGGAGGAACAAAGAAGGGCATTTCCCTTGGGATTGAATTAATTGTGTTTTTCTGCATTGTTGTATTTTTCTCCTTTGTGTGCTAATTGTCTTTTGCTATTTCTAAGGAGTTGGAACTCGGGAATTTTCTACACCTTTGTCTAAATTAGGCCAGTGTTTGATCGTTTCATATTCTTCATATGGTTCATTTTTTGTTACATTCTTAATGGCGACATCGAGTCTAACCGCCATTTATTTTCGGCTTGTAGTCTGTATCGATGGGTAGGAAAGCTGGTACTTTATACATCAACCCAAAGAAGTTCGGCACTCTTAGCAAACCTTGCATGAAGGAAATGATATCATTTCTCAATTGCATGGCTCTTAATCATAACAATGACGAGAAGTGCACCAGACATAAGGAAATTCTAAATACTTGCATGGATGCTCAGGTGACTTTCTGCTACTCGTTGATATAATTCGAGAATTATTTATACTCTTCATTGAGTTCTTTGGCCATTTTAAAACTCTACCATGTGATAATTACTTGCTTTTCGATATAATTTGAGAATTTCGTATACTCTTCATCGAGTTCTTTGGCTTTTTTAAAACTCTACCATGTGATAGTTACTTGCTTTTCGATCTAATTCGAGAATTTCTTGGCCATTTTAAAACTCTACAATGTGATAGTTGCTTTTCCATATAATTCGAGAATTTCGTATACTCTTCATCGAGTTCTTTGGCTATGTTAAAACTCTACCATGTGATAATTACTTGCTTTTCGGTCTCTCTTTATGTGCTGCAGTCCAACCGAAACAGGAAGCCTTGGGGTAGCATTAATTACCACTTGCAGAGGCTTAGCAGGGGAAGAAAGTAGTTTGAATTTTGAACTTAAAGAGCTGTCTGCAGAGAATTCTTATTAGAATCAATACCCAGGTGCAAATTTCTTGACGTTATTTTTATCATATTTAGTGCATTTCCTGAGATAAATTTGGTTGGGGAACTTGTTTGTTGGCTTCTTTCCTGTAGTCAAATATTTGAGAGCTCTGCTCTTAGCATATCCAGTGATTATGGATCTCAACTAGAACAATAAATATTCTACGGATTTCCTGATGTCAAATGCTAGAGATCATAGTTATTGTATGGTGTAATAGTTGAGGGACATGTAACTTGGTATCTGAACTATCATGGTTATTTAAAACTAAAAAAATTAGTTTTTATGCGTACCGTGTAACCCTAAGTATTTGAACTTTTCTTCCGAAAAATTGCCACTTCCATCT

mRNA sequence

AAAAAAAAAAAAAAACCCTACGCACCCTGCTTTTCTCTCCAACGCGAAGTTCTCTGCCATTTCTCCTTCCTTCCTCTGACTGCCCTCTTCTTGAAACCCCGCCTCCGGCGAGCAGAGCCCATTAGCGGCGCGGCGTCACATCTCGATCTGGTCTCTCTCTCTCTCTCGAGACTTCTCTCCGGCGACTACACGCCCTTATTTATCCACGACTTCAGTTCTCTTCAGACCCGAAACCCACACTTCGTAAAAACCAGATCCGAAGTGGGAATTCTCTCTAAATCTGAATCGGAATTTCGGTTGTCTGTATCGATGGGTAGGAAAGCTGGTACTTTATACATCAACCCAAAGAAGTTCGGCACTCTTAGCAAACCTTGCATGAAGGAAATGATATCATTTCTCAATTGCATGGCTCTTAATCATAACAATGACGAGAAGTGCACCAGACATAAGGAAATTCTAAATACTTGCATGGATGCTCAGTCCAACCGAAACAGGAAGCCTTGGGGTAGCATTAATTACCACTTGCAGAGGCTTAGCAGGGGAAGAAAGTAGTTTGAATTTTGAACTTAAAGAGCTGTCTGCAGAGAATTCTTATTAGAATCAATACCCAGGTGCAAATTTCTTGACGTTATTTTTATCATATTTAGTGCATTTCCTGAGATAAATTTGGTTGGGGAACTTGTTTGTTGGCTTCTTTCCTGTAGTCAAATATTTGAGAGCTCTGCTCTTAGCATATCCAGTGATTATGGATCTCAACTAGAACAATAAATATTCTACGGATTTCCTGATGTCAAATGCTAGAGATCATAGTTATTGTATGGTGTAATAGTTGAGGGACATGTAACTTGGTATCTGAACTATCATGGTTATTTAAAACTAAAAAAATTAGTTTTTATGCGTACCGTGTAACCCTAAGTATTTGAACTTTTCTTCCGAAAAATTGCCACTTCCATCT

Coding sequence (CDS)

AAAAAAAAAAAAAAACCCTACGCACCCTGCTTTTCTCTCCAACGCGAAGTTCTCTGCCATTTCTCCTTCCTTCCTCTGACTGCCCTCTTCTTGAAACCCCGCCTCCGGCGAGCAGAGCCCATTAGCGGCGCGGCGTCACATCTCGATCTGGTCTCTCTCTCTCTCTCGAGACTTCTCTCCGGCGACTACACGCCCTTATTTATCCACGACTTCAGTTCTCTTCAGACCCGAAACCCACACTTCGTAAAAACCAGATCCGAAGTGGGAATTCTCTCTAAATCTGAATCGGAATTTCGGTTGTCTGTATCGATGGGTAGGAAAGCTGGTACTTTATACATCAACCCAAAGAAGTTCGGCACTCTTAGCAAACCTTGCATGAAGGAAATGATATCATTTCTCAATTGCATGGCTCTTAATCATAACAATGACGAGAAGTGCACCAGACATAAGGAAATTCTAAATACTTGCATGGATGCTCAGTCCAACCGAAACAGGAAGCCTTGGGGTAGCATTAATTACCACTTGCAGAGGCTTAGCAGGGGAAGAAAGTAG

Protein sequence

KKKKKPYAPCFSLQREVLCHFSFLPLTALFLKPRLRRAEPISGAASHLDLVSLSLSRLLSGDYTPLFIHDFSSLQTRNPHFVKTRSEVGILSKSESEFRLSVSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Homology
[Close]
BLAST of Cp4.1LG11g08140 vs. NCBI nr
Match: KAG6599119.1 (putative carboxylesterase 18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188 bits (478), Expect = 2.06e-54
Identity = 107/170 (62.94%), Postives = 111/170 (65.29%), Query Frame = 0 

Query: 14  QREVLCHFSFLPLTALFLKPRLRRAEPISGAASHLDLVSLSLSRLLSGDYTPLFIHDFSS 73
           ++  LC F FLPLTA+F K RLRRAEPISGAASHLDL                       
Sbjct: 313 KQSSLCRFFFLPLTAIFSKLRLRRAEPISGAASHLDL----------------------- 372

Query: 74  LQTRNPHFVKTRSEVGILSKSESEFRLSVSMGRKAGTLYINPKKFGTLSKPCMKEMISFL 133
             TRNPHFV+TRSEVGILS SESEFRL                           EMISFL
Sbjct: 373 --TRNPHFVETRSEVGILSISESEFRLY------------------------RWEMISFL 432

Query: 134 NCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK 183
           NCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK
Sbjct: 433 NCMALNHNNDEKCTRHKEILNTCMDAQSNRNRKPWGSINYHLQRLSRGRK 433

[Close]
BLAST of Cp4.1LG11g08140 vs. NCBI nr
Match: XP_022946561.1 (uncharacterized protein LOC111450585 [Cucurbita moschata] >XP_022946562.1 uncharacterized protein LOC111450585 [Cucurbita moschata] >XP_022946563.1 uncharacterized protein LOC111450585 [Cucurbita moschata] >XP_023545438.1 uncharacterized protein LOC111804867 [Cucurbita pepo subsp. pepo] >XP_023545439.1 uncharacterized protein LOC111804867 [Cucurbita pepo subsp. pepo] >XP_023545440.1 uncharacterized protein LOC111804867 [Cucurbita pepo subsp. pepo] >KAG7030058.1 hypothetical protein SDJN02_08404 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171 bits (434), Expect = 3.81e-52
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR
Sbjct: 1   MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 60

Query: 164 NRKPWGSINYHLQRLSRGRK 183
           NRKPWGSINYHLQRLSRGRK
Sbjct: 61  NRKPWGSINYHLQRLSRGRK 80

[Close]
BLAST of Cp4.1LG11g08140 vs. NCBI nr
Match: XP_022999786.1 (uncharacterized protein LOC111494031 [Cucurbita maxima] >XP_022999787.1 uncharacterized protein LOC111494031 [Cucurbita maxima] >XP_022999788.1 uncharacterized protein LOC111494031 [Cucurbita maxima])

HSP 1 Score: 171 bits (432), Expect = 7.67e-52
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKE+LNTCMDAQSNR
Sbjct: 1   MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKELLNTCMDAQSNR 60

Query: 164 NRKPWGSINYHLQRLSRGRK 183
           NRKPWGSINYHLQRLSRGRK
Sbjct: 61  NRKPWGSINYHLQRLSRGRK 80

[Close]
BLAST of Cp4.1LG11g08140 vs. NCBI nr
Match: XP_022157440.1 (uncharacterized protein LOC111024138 [Momordica charantia] >XP_022157441.1 uncharacterized protein LOC111024138 [Momordica charantia] >XP_022157886.1 uncharacterized protein LOC111024495 isoform X2 [Momordica charantia] >XP_022157887.1 uncharacterized protein LOC111024495 isoform X2 [Momordica charantia])

HSP 1 Score: 162 bits (410), Expect = 1.70e-48
Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQSNR
Sbjct: 1   MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRNKELLNTCMDAQSNR 60

Query: 164 NRKPWGSINYHLQRLSRGRK 183
           NRKPWGSINYHLQRLSRGRK
Sbjct: 61  NRKPWGSINYHLQRLSRGRK 80

[Close]
BLAST of Cp4.1LG11g08140 vs. NCBI nr
Match: XP_022157885.1 (uncharacterized protein LOC111024495 isoform X1 [Momordica charantia])

HSP 1 Score: 163 bits (413), Expect = 3.26e-48
Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 0 

Query: 102 VSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQS 161
           V MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQS
Sbjct: 54  VRMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRNKELLNTCMDAQS 113

Query: 162 NRNRKPWGSINYHLQRLSRGRK 183
           NRNRKPWGSINYHLQRLSRGRK
Sbjct: 114 NRNRKPWGSINYHLQRLSRGRK 135

[Close]
BLAST of Cp4.1LG11g08140 vs. ExPASy TrEMBL
Match: A0A6J1G420 (uncharacterized protein LOC111450585 OS=Cucurbita moschata OX=3662 GN=LOC111450585 PE=4 SV=1)

HSP 1 Score: 171 bits (434), Expect = 1.84e-52
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR
Sbjct: 1   MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 60

Query: 164 NRKPWGSINYHLQRLSRGRK 183
           NRKPWGSINYHLQRLSRGRK
Sbjct: 61  NRKPWGSINYHLQRLSRGRK 80

[Close]
BLAST of Cp4.1LG11g08140 vs. ExPASy TrEMBL
Match: A0A6J1KBS0 (uncharacterized protein LOC111494031 OS=Cucurbita maxima OX=3661 GN=LOC111494031 PE=4 SV=1)

HSP 1 Score: 171 bits (432), Expect = 3.71e-52
Identity = 79/80 (98.75%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKE+LNTCMDAQSNR
Sbjct: 1   MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKELLNTCMDAQSNR 60

Query: 164 NRKPWGSINYHLQRLSRGRK 183
           NRKPWGSINYHLQRLSRGRK
Sbjct: 61  NRKPWGSINYHLQRLSRGRK 80

[Close]
BLAST of Cp4.1LG11g08140 vs. ExPASy TrEMBL
Match: A0A6J1DVQ0 (uncharacterized protein LOC111024138 OS=Momordica charantia OX=3673 GN=LOC111024495 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 8.22e-49
Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQSNR
Sbjct: 1   MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRNKELLNTCMDAQSNR 60

Query: 164 NRKPWGSINYHLQRLSRGRK 183
           NRKPWGSINYHLQRLSRGRK
Sbjct: 61  NRKPWGSINYHLQRLSRGRK 80

[Close]
BLAST of Cp4.1LG11g08140 vs. ExPASy TrEMBL
Match: A0A6J1DU96 (uncharacterized protein LOC111024495 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024495 PE=4 SV=1)

HSP 1 Score: 163 bits (413), Expect = 1.58e-48
Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 0 

Query: 102 VSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQS 161
           V MGRKAGTLYINPKKFGTLSKPCMKEMISFLNC+ALN NND+KCTR+KE+LNTCMDAQS
Sbjct: 54  VRMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCIALNQNNDDKCTRNKELLNTCMDAQS 113

Query: 162 NRNRKPWGSINYHLQRLSRGRK 183
           NRNRKPWGSINYHLQRLSRGRK
Sbjct: 114 NRNRKPWGSINYHLQRLSRGRK 135

[Close]
BLAST of Cp4.1LG11g08140 vs. ExPASy TrEMBL
Match: A0A0A0KD09 (CX9C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G361270 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 1.65e-46
Identity = 71/90 (78.89%), Postives = 83/90 (92.22%), Query Frame = 0 

Query: 94  SESEFRLSVSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEIL 153
           +E   R SV+MGRKAG+L+INPKKFG L+KPCMKEM+SFLNC+ALN NNDEKCTRHKE+L
Sbjct: 27  NEIRARASVTMGRKAGSLFINPKKFGNLNKPCMKEMVSFLNCIALNQNNDEKCTRHKELL 86

Query: 154 NTCMDAQSNRNRKPWGSINYHLQRLSRGRK 183
           NTCMDAQ+ R++KPWGSINYHLQRL+RGRK
Sbjct: 87  NTCMDAQATRSKKPWGSINYHLQRLNRGRK 116

[Close]
BLAST of Cp4.1LG11g08140 vs. TAIR 10
Match: AT1G47278.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 37 Blast hits to 37 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 4.2e-29
Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 0 

Query: 96  SEFRL--SVSMGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEIL 155
           S FRL     MGRKAG LYINPKK G L+KPCMKEM+SFLNCMALN+  D+KC + K++L
Sbjct: 2   SVFRLVERAIMGRKAGNLYINPKKLGNLAKPCMKEMVSFLNCMALNNIKDDKCEKQKQLL 61

Query: 156 NTCMDAQSNRNRKPWGSINYHLQRLSRGRK 184
           + CM  QS+   K WG+INYHLQRL+RGRK
Sbjct: 62  SVCMQGQSDHKNKSWGNINYHLQRLTRGRK 91

[Close]
BLAST of Cp4.1LG11g08140 vs. TAIR 10
Match: AT1G47278.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 37 Blast hits to 37 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 5.5e-29
Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 0 

Query: 104 MGRKAGTLYINPKKFGTLSKPCMKEMISFLNCMALNHNNDEKCTRHKEILNTCMDAQSNR 163
           MGRKAG LYINPKK G L+KPCMKEM+SFLNCMALN+  D+KC + K++L+ CM  QS+ 
Sbjct: 1   MGRKAGNLYINPKKLGNLAKPCMKEMVSFLNCMALNNIKDDKCEKQKQLLSVCMQGQSDH 60

Query: 164 NRKPWGSINYHLQRLSRGRK 184
             K WG+INYHLQRL+RGRK
Sbjct: 61  KNKSWGNINYHLQRLTRGRK 80

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g08140 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g08140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6599119.12.06e-5462.94putative carboxylesterase 18, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022946561.13.81e-52100.00uncharacterized protein LOC111450585 [Cucurbita moschata] >XP_022946562.1 unchar... [more]
XP_022999786.17.67e-5298.75uncharacterized protein LOC111494031 [Cucurbita maxima] >XP_022999787.1 uncharac... [more]
XP_022157440.11.70e-4893.75uncharacterized protein LOC111024138 [Momordica charantia] >XP_022157441.1 uncha... [more]
XP_022157885.13.26e-4892.68uncharacterized protein LOC111024495 isoform X1 [Momordica charantia][more]
BLAST of Cp4.1LG11g08140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G4201.84e-52100.00uncharacterized protein LOC111450585 OS=Cucurbita moschata OX=3662 GN=LOC1114505... [more]
A0A6J1KBS03.71e-5298.75uncharacterized protein LOC111494031 OS=Cucurbita maxima OX=3661 GN=LOC111494031... [more]
A0A6J1DVQ08.22e-4993.75uncharacterized protein LOC111024138 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DU961.58e-4892.68uncharacterized protein LOC111024495 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A0A0KD091.65e-4678.89CX9C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G361270 PE=4 S... [more]
BLAST of Cp4.1LG11g08140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47278.24.2e-2965.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G47278.15.5e-2968.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031731IMS import disulfide relay-system, CHCH-CHCH-like Cx9CPFAMPF16860CX9Ccoord: 122..159
e-value: 1.6E-8
score: 34.4
IPR017264Ribosomal protein MRP10, mitochondrialPANTHERPTHR2806637S RIBOSOMAL PROTEIN MRP10, MITOCHONDRIALcoord: 104..183
IPR009069Cysteine alpha-hairpin motif superfamilySUPERFAMILY47072Cysteine alpha-hairpin motifcoord: 123..162

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g08140.1Cp4.1LG11g08140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032543 mitochondrial translation
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003735 structural constituent of ribosome