Cp4.1LG11g07920 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g07920
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCp4.1LG11: 6427511 .. 6432881 (-)
RNA-Seq ExpressionCp4.1LG11g07920
SyntenyCp4.1LG11g07920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGAACGACGACGTTTAGGATAATAAACTGGCGCCATATATTGTCAATCTCTTCTTCACTTGGGTTGCCGGCGGCAGGAATCATTCAGCCTTCGTTTGGATTGCGTTCTGGAGCCGCCGCTGCCTTCACAACTTTCCCGATCACCAGATTCAATTTTCCGATAACATGCTTCTTCTGTCACCATTGCCTCTCTCTACTCGCTTTCCTGCAACTCAATTACCTTCTCCCACCGTCTTCCTCCACCACCAGAACCCCCCTATCACTACCCACCTCTCATTTCCCATCATCTCCGCCGCCGCGGCCTCCACCACCTCCTTCTCCTCCGTCGTCACCTGTTCCACTTCATCCGACGCGCTCGAGCTCGACGTTTTCGAAAACGACCACGTTTCTTTTCAGAGTCGCCGTTACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTCCGGCTTATCCGAAGTCCGATTCCGATTCGGAGGTGGAATTCGACTCTGTTTTGGACTCTGATTCTGAGTCTGATAAGGCTTCTCCGACCTCCCTTGACCCTACCGAGTTCCAGCTTGCCGAGACCTACAGGGCCGTGCCGGCGCCTCTATGGCACTCTCTGCTTAAGTCTCTTTGCGCTTCTTCCTCTTCGATTGGGCTAGGTTACGCGGTTGTTTTGTGGCTTCAGAAGCATAATCTGTGCTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCTCTTGGCCGCTCTGAGAAGCTCTATGAGGCTTTCATTCTCTCCCAGAGCCAAACCCTAACCCCATTAACGTATAATGCTCTCATTGGTGCCTGTGCTCGCAATAACGATTCGGAGAAGGCTCTCAATTTGATATCTAGGATGCGACAGGATGGTTATCAATCTGATTTTGTCAACTATAGTTTGATTATTCAGTCGCTTACTCGCACCAATAAGATTGATGTTCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTCAACGATATCATATTGGGCTTCGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATTATCTCTGCTTTGGGAAATTATGGGCGGACAGAGGAAGCTGAGGCTATCTTTGAGGAAATGAAGGAAGGTGGATTGAAACCAAGGATTAAGGCCTTCAATGCTCTTCTTAAAGGCTATGCTAAAAAGGGTTCTCTGAAAGAGGCAGAATCCATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCATATGCAAATGTGGGGAGTTGGCAAAGTGCAAGACAATTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCTAATACCTTCATTTTCAGTAGGATTTTAGCTAGTTATCGTGACCGGGGCGAATGGCAGAAAACGTTTGAAGTTTTGAGGGAAATGAAGAACTGCAATGTCAAACCTGATAGGCATTTTTACAATGTCATGATTGATACGTTTGGGAAGTTCAATTGTGTTGATCATGCCATGGAAACATACGAACGGATGCTCTCCGAGGGGATCGAACCAGATGTTGTTACTTGGAACACGCTTATAGATTGTCATCGTAAGCACGGATACCATGAAAGGGCTGCAGAGTTGTTCGAAGAAATGCAGGAACGTGGTTACTTTCCTTGTCCCACAACGTATAATATTATGATCAATTCATTAGGTGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACCCTTGTTGATATATATGGACAATCTGGAAGGTTTAATGACGCCATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGACTGAAACCATCCTCAACAATGTATAATGCTTTAATCAATGCCTTTGCTCAAAAAGTATGTCATCCTTCCCGCATTTCATCTCACAAATTGTTTGGTATACATATTCTTCTTTGAAAAATCGATGATGATATTCACTGCTGAAGTTCCAATAAAAAGATACCCACTGTTGGAACATATTTCCCATGTATTGATAAGTTACTTGTTCATAAGTTCATACTTTTTTTCTCCTTTTCTGATATATTGTTGTTCAAATGGATGGAAACATTTGGAACAAAATAATTTTATATATAGTTTCATTGCTTGATAACATGATACAGCCAGTATACCATCTGATTTGGAGCTTTTGTATCTGAGTAATATTTTTTTTGTATAAAGTCTCATCTTTCATTGGACCATGACGAGATTCGCCTCCTGAATCATGGTTGAAATTATAAAATTTATATATCCAAATATATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAAGGTGTGGAAACCTCTCCCTAGCAGACGCGTTTTAAAAATCTTAAGGGAAAGCGCAGATGACAATATTTGCTAGCGGTGGGCTTGGGTGTTACGTATATATTTTAATTTGTTTCTTGAAAATCCATTTAGTGATCTTCCATTTTTATCATTTGGCAGGGTTTGTCAGAGCAGGCAGTAAATGCATATAGAGTCATGAGATCAGATGGACTAAAACCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAGGATAGGAGAGACATTGAAGCCTTTACAATCTTGCAGTACATGAAGGAAAATGTAGGTGCAGTATATTTACAATAACGTTTTCATATTTTTTATTCTTAATATCAAGAGTAAGGCTTATCCATTCATCATTCGAACTTATTTGGTCCTACCTTCTACTGCAGGATGTGAAGCCTGACGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGAAAAGTTTGACAAGGTAGAAGAATATAACCCTACAGCTATTTTTCATAATTTGCTCATGTTATTTTATGCATAAATTTTGCGTATTTGGCAAATATGTGTTAGAAACCACGACCCACTACAATGGTATGATATTGTCCTCTTTGAGCATTAACTCTCATGGATTTGATTTTGGTTTTCCCAAAAGGCCTTGTACCAATGGAGAATTGGAGATGTATTCCTTACTTATAAGCTCATGATCAACCCCTTTAATTAGCATGGGACTCCTCTCCTAACAATCCTCAACAATCCTCCCCTCAAACAAAGTACATCATAGAGCCTCCCTTGAGGCCTATGGAGTCCTCGAACAACCTCCCCTTAATCGAGACTCGACTTCTTCTCTGGAGCTATCGAACAAAGTACACCTTGTGTTCGACACTTGAGTCACTTTTGACTACATTTTCGAGTCTCACAACTCCTTTGTTCTACATTTGAGGATTTTATTGAAATGTCTAAGTTAAGGACATGACTCTAATACCATGTTAGGAACCACGACCCTCCACAATGGTATGATATTGTCCACTTTGAGCATTAGCTCTCATGACTTTGCTGCATTTGGTTTTTTCAAAAGATCTCATACCAATGGGGATGTATTTCTTATTTATAAACTCATGATCAATCCCTTAATTAGCCGATATGGGACTCCTCTCCCAACAATTCTCAACAATATGACCTCAGATTGTTCATCAAATTGGAGCCTACTCAATGTCTTCTACAATGTTTTCCGTTGTTTTTTAGGGAGATATTGTGAAGATTAAATATTAAAAAATGAAGCTGGACTAGTTTTGCAAATTGGATGAAAAACTTTTGATGTCTTAGCTTTTGCTAGTCGTCCCGGTTGCAGCATTTCTCATTTCTTATACGAACACATCATCGAATAGAAACTTGTGACAAATTGCTTTCTACAGCTCCCTGTGCTTTGTTTCATATCACCCGGCAACCTCAAATTTCATGTTTTCAATTCTCAGTTTTGAAATAGAGAAAAAGAGAGAATGTTAAAGATTGAAAGTACATTATTTGAGTTTCAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAAATACATGAAGCGTACACTAAGCTTATAGTTGGCCGCTTGATCATGTATCTATGCACTCTGTAGAACAAATTTGCAGGAGTTTATCAAACCAATACTCATAGGTACGTACCGGAGGCTTCAAGATGTGATGTTCTTGACAGTTTCATAATTAATTGGTATCAAAGTCCACAATTTCTTGGGAATTCATGTATTAATGTATGAATTAATGCTCATATTTCATGAATTAATGTTTTGTGTCTGCCCTGGAATGGTTTTGCAGGAATTGCCTATTCAAGCTCTGAGTCATTTCTTATGACTTGGAGAAGAGAAAGGTTTGATCTTACACTAATAGTATGGCATTATACTATCAGCAAAAAGTTGACATTTCTGAAGTAGAACTGCCAATCACCCCTTAAATGATACAGCTCCACCGTACCCGGCCGCCAGGTGCCGGTCTTAGAAACGCCAGGCAAATTCCCATCTATTGATAATTCTTGTATTATTGTTTATATAACATATTCACCATTCTTATGTCATACAGTAAAATGCAGAAGCAATAGTTGATCCAAGGACCTCAATACGTGAGTTCTTTTCTTTCTTTGAATGGTCTGCTTAATCAGTCTGTCTTTGTATCGTTTAATGATATTGGTCGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATACGTGAGTTCTTTTCTTTCTTTGAATGATTTGCTAAATCAGTCTGTTTTTGTAGCGTTTAAAGATAGAAACTTCGACGTAGGTTGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATATGTGAGTTCTTTTCCGTTCTTTTCTTTCTTTGAATGATCTGTTAAATCAGTCTGTTTTTGTATCGTTTAAAGATAGAAACTTCGACATAGGTCGATAGAATTCAATCATCTGTGCTTGTTTAGAGTAGGTGTGGCAATAAACATATGGAGTCCAGAAACTAAACACATCTTTCTGAATGTATCTGTCAAAGGGAAATAGCAGAAACAAGTGGTCTAAACTTGTTCTTAGAAAGTCTGGAACAAAACATGAACATCAATAAGACTGACGACAACAAGAATAGCCTAAAATAAGTTCTCATTTCTTGCATCCCTAGCTCAAACACCTCCCTCTTCTTCCCATATCTGCTACTCCTCTCAATCAAGTAACCTTCAAGATAATCATCAATCGACACCAGCTTGTCTAAGTTGCCCCTTGAACGGAGCTCGGTCTTGTCAAGGTACTCTGGACCGAGCTTAAAGATTGTAAAAAACGCAGCAGA

mRNA sequence

CGAACGACGACGTTTAGGATAATAAACTGGCGCCATATATTGTCAATCTCTTCTTCACTTGGGTTGCCGGCGGCAGGAATCATTCAGCCTTCGTTTGGATTGCGTTCTGGAGCCGCCGCTGCCTTCACAACTTTCCCGATCACCAGATTCAATTTTCCGATAACATGCTTCTTCTGTCACCATTGCCTCTCTCTACTCGCTTTCCTGCAACTCAATTACCTTCTCCCACCGTCTTCCTCCACCACCAGAACCCCCCTATCACTACCCACCTCTCATTTCCCATCATCTCCGCCGCCGCGGCCTCCACCACCTCCTTCTCCTCCGTCGTCACCTGTTCCACTTCATCCGACGCGCTCGAGCTCGACGTTTTCGAAAACGACCACGTTTCTTTTCAGAGTCGCCGTTACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTCCGGCTTATCCGAAGTCCGATTCCGATTCGGAGGTGGAATTCGACTCTGTTTTGGACTCTGATTCTGAGTCTGATAAGGCTTCTCCGACCTCCCTTGACCCTACCGAGTTCCAGCTTGCCGAGACCTACAGGGCCGTGCCGGCGCCTCTATGGCACTCTCTGCTTAAGTCTCTTTGCGCTTCTTCCTCTTCGATTGGGCTAGGTTACGCGGTTGTTTTGTGGCTTCAGAAGCATAATCTGTGCTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCTCTTGGCCGCTCTGAGAAGCTCTATGAGGCTTTCATTCTCTCCCAGAGCCAAACCCTAACCCCATTAACGTATAATGCTCTCATTGGTGCCTGTGCTCGCAATAACGATTCGGAGAAGGCTCTCAATTTGATATCTAGGATGCGACAGGATGGTTATCAATCTGATTTTGTCAACTATAGTTTGATTATTCAGTCGCTTACTCGCACCAATAAGATTGATGTTCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTCAACGATATCATATTGGGCTTCGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATTATCTCTGCTTTGGGAAATTATGGGCGGACAGAGGAAGCTGAGGCTATCTTTGAGGAAATGAAGGAAGGTGGATTGAAACCAAGGATTAAGGCCTTCAATGCTCTTCTTAAAGGCTATGCTAAAAAGGGTTCTCTGAAAGAGGCAGAATCCATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCATATGCAAATGTGGGGAGTTGGCAAAGTGCAAGACAATTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCTAATACCTTCATTTTCAGTAGGATTTTAGCTAGTTATCGTGACCGGGGCGAATGGCAGAAAACGTTTGAAGTTTTGAGGGAAATGAAGAACTGCAATGTCAAACCTGATAGGCATTTTTACAATGTCATGATTGATACGTTTGGGAAGTTCAATTGTGTTGATCATGCCATGGAAACATACGAACGGATGCTCTCCGAGGGGATCGAACCAGATGTTGTTACTTGGAACACGCTTATAGATTGTCATCGTAAGCACGGATACCATGAAAGGGCTGCAGAGTTGTTCGAAGAAATGCAGGAACGTGGTTACTTTCCTTGTCCCACAACGTATAATATTATGATCAATTCATTAGGTGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACCCTTGTTGATATATATGGACAATCTGGAAGGTTTAATGACGCCATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGACTGAAACCATCCTCAACAATGTATAATGCTTTAATCAATGCCTTTGCTCAAAAAGCAGTAAATGCATATAGAGTCATGAGATCAGATGGACTAAAACCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAGGATAGGAGAGACATTGAAGCCTTTACAATCTTGCAGTACATGAAGGAAAATGATGTGAAGCCTGACGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGAAAAGTTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAAATACATGAAGCGTACACTAAGCTTATAGTTGGCCGCTTGATCATGTATCTATGCACTCTGTAGAACAAATTTGCAGGAGTTTATCAAACCAATACTCATAGGAATTGCCTATTCAAGCTCTGAGTCATTTCTTATGACTTGGAGAAGAGAAAGGTTTGATCTTACACTAATAGTATGGCATTATACTATCAGCAAAAAGTTGACATTTCTGAAGTAGAACTGCCAATCACCCCTTAAATGATACAGCTCCACCGTACCCGGCCGCCAGGTGCCGGTCTTAGAAACGCCAGGCAAATTCCCATCTATTGATAATTCTTGTATTATTGTTTATATAACATATTCACCATTCTTATGTCATACAGTAAAATGCAGAAGCAATAGTTGATCCAAGGACCTCAATACGTGAGTTCTTTTCTTTCTTTGAATGGTCTGCTTAATCAGTCTGTCTTTGTATCGTTTAATGATATTGGTCGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATACGTTGATAGGTTGCAATATTGAGTAAAATGCAGAAGAAATCATTGATCCAAGGACCTCAATATGTGAGTTCTTTTCCGTTCTTTTCTTTCTTTGAATGATCTGTTAAATCAGTCTGTTTTTGTATCGTTTAAAGATAGAAACTTCGACATAGGTCGATAGAATTCAATCATCTGTGCTTGTTTAGAGTAGGTGTGGCAATAAACATATGGAGTCCAGAAACTAAACACATCTTTCTGAATGTATCTGTCAAAGGGAAATAGCAGAAACAAGTGGTCTAAACTTGTTCTTAGAAAGTCTGGAACAAAACATGAACATCAATAAGACTGACGACAACAAGAATAGCCTAAAATAAGTTCTCATTTCTTGCATCCCTAGCTCAAACACCTCCCTCTTCTTCCCATATCTGCTACTCCTCTCAATCAAGTAACCTTCAAGATAATCATCAATCGACACCAGCTTGTCTAAGTTGCCCCTTGAACGGAGCTCGGTCTTGTCAAGGTACTCTGGACCGAGCTTAAAGATTGTAAAAAACGCAGCAGA

Coding sequence (CDS)

ATGCTTCTTCTGTCACCATTGCCTCTCTCTACTCGCTTTCCTGCAACTCAATTACCTTCTCCCACCGTCTTCCTCCACCACCAGAACCCCCCTATCACTACCCACCTCTCATTTCCCATCATCTCCGCCGCCGCGGCCTCCACCACCTCCTTCTCCTCCGTCGTCACCTGTTCCACTTCATCCGACGCGCTCGAGCTCGACGTTTTCGAAAACGACCACGTTTCTTTTCAGAGTCGCCGTTACGACTTCACTCCTCTCCTCGACTTCCTTTCCCGGTCTCCGGCTTATCCGAAGTCCGATTCCGATTCGGAGGTGGAATTCGACTCTGTTTTGGACTCTGATTCTGAGTCTGATAAGGCTTCTCCGACCTCCCTTGACCCTACCGAGTTCCAGCTTGCCGAGACCTACAGGGCCGTGCCGGCGCCTCTATGGCACTCTCTGCTTAAGTCTCTTTGCGCTTCTTCCTCTTCGATTGGGCTAGGTTACGCGGTTGTTTTGTGGCTTCAGAAGCATAATCTGTGCTTCTCTTACGAATTGCTTTACTCGATTCTCATTCATGCTCTTGGCCGCTCTGAGAAGCTCTATGAGGCTTTCATTCTCTCCCAGAGCCAAACCCTAACCCCATTAACGTATAATGCTCTCATTGGTGCCTGTGCTCGCAATAACGATTCGGAGAAGGCTCTCAATTTGATATCTAGGATGCGACAGGATGGTTATCAATCTGATTTTGTCAACTATAGTTTGATTATTCAGTCGCTTACTCGCACCAATAAGATTGATGTTCCAATCTTGCAAAAGCTTTACGAAGAGATTGAGTCTGATAAAATTGAACTCGATGGGCAGCTCCTCAACGATATCATATTGGGCTTCGCGAAAGCTGGAGATCCTAACCGAGCTCTGTATTTCTTGTCCATGGTACAGGCGAGTGGTTTAAACCCCAAAACTTCTACGTTTGTTGCGATTATCTCTGCTTTGGGAAATTATGGGCGGACAGAGGAAGCTGAGGCTATCTTTGAGGAAATGAAGGAAGGTGGATTGAAACCAAGGATTAAGGCCTTCAATGCTCTTCTTAAAGGCTATGCTAAAAAGGGTTCTCTGAAAGAGGCAGAATCCATTGTTTCAGAGATGGAAAAGAGTGGATTATCACCGGATGAGCACACATATGGTCTTCTCGTTGATGCATATGCAAATGTGGGGAGTTGGCAAAGTGCAAGACAATTGTTGAAACAAATGGAAGCTAGAAATGTACAGCCTAATACCTTCATTTTCAGTAGGATTTTAGCTAGTTATCGTGACCGGGGCGAATGGCAGAAAACGTTTGAAGTTTTGAGGGAAATGAAGAACTGCAATGTCAAACCTGATAGGCATTTTTACAATGTCATGATTGATACGTTTGGGAAGTTCAATTGTGTTGATCATGCCATGGAAACATACGAACGGATGCTCTCCGAGGGGATCGAACCAGATGTTGTTACTTGGAACACGCTTATAGATTGTCATCGTAAGCACGGATACCATGAAAGGGCTGCAGAGTTGTTCGAAGAAATGCAGGAACGTGGTTACTTTCCTTGTCCCACAACGTATAATATTATGATCAATTCATTAGGTGAGCAGGAAAAGTGGGACGAGGTGAAAATCTTGTTAGGAAAGATGCAGAGTCAGGGCTTACTTCCCAATGTGATAACATACACTACCCTTGTTGATATATATGGACAATCTGGAAGGTTTAATGACGCCATTGAGTGCTTGGAGGCCATGAAGTCTGCTGGACTGAAACCATCCTCAACAATGTATAATGCTTTAATCAATGCCTTTGCTCAAAAAGCAGTAAATGCATATAGAGTCATGAGATCAGATGGACTAAAACCCAGTCTCTTGGCTCTTAATTCATTGATCAATGCATTTGGCGAGGATAGGAGAGACATTGAAGCCTTTACAATCTTGCAGTACATGAAGGAAAATGATGTGAAGCCTGACGTTGTCACATATACAACACTTATGAAAGCTTTGATTCGTGTTGAAAAGTTTGACAAGGTTCCGGCTGTGTATGAAGAGATGATTTTGTCTGGATGTACTCCTGATGGAAAGGCCAGAGCCATGTTGCGGTCTGCCCTCAAATACATGAAGCGTACACTAAGCTTATAG

Protein sequence

MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQKAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
Homology
[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy Swiss-Prot
Match: Q8L844 (Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 959.1 bits (2478), Expect = 2.7e-278
Identity = 501/720 (69.58%), Postives = 587/720 (81.53%), Query Frame = 0 

Query: 1   MLLLSPLPL-STRFPATQLPSPTVFLHHQ--NPPITTHLSFPIISAAAASTTSFSSVVTC 60
           MLLL   PL STRF +    +     HH+   PPI+   +    S  + S +S SS  + 
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPPISAFSATTSASLPSPSPSSSSSYFSS 60

Query: 61  STSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSES 120
               D  E +  +N+  S   RRYDF+PLL FLSR            VE    LDS+SES
Sbjct: 61  WNGLDTNEEE--DNEFSSEVHRRYDFSPLLKFLSRF---------GPVEL--ALDSESES 120

Query: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180
           + ASP SL+P EF L E+YRAVPAP WHSL+KSL +S+SS+GL YAVV WLQKHNLCFSY
Sbjct: 121 E-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240
           ELLYSILIHALGRSEKLYEAF+LSQ QTLTPLTYNALIGACARNND EKALNLI++MRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           GYQSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD QL+NDII+GFAK+GDP+
Sbjct: 241 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           +AL  L M QA+GL+ KT+T V+IISAL + GRT EAEA+FEE+++ G+KPR +A+NALL
Sbjct: 301 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 360

Query: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420
           KGY K G LK+AES+VSEMEK G+SPDEHTY LL+DAY N G W+SAR +LK+MEA +VQ
Sbjct: 361 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480
           PN+F+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNC+DHAM T
Sbjct: 421 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 480

Query: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540
           ++RMLSEGIEPD VTWNTLIDCH KHG H  A E+FE M+ RG  PC TTYNIMINS G+
Sbjct: 481 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QE+WD++K LLGKM+SQG+LPNV+T+TTLVD+YG+SGRFNDAIECLE MKS GLKPSSTM
Sbjct: 541 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 600

Query: 601 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660
           YNALINA+AQ+     AVNA+RVM SDGLKPSLLALNSLINAFGEDRRD EAF +LQYMK
Sbjct: 601 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 713
           EN VKPDVVTYTTLMKALIRV+KF KVP VYEEMI+SGC PD KAR+MLRSAL+YMK+TL
Sbjct: 661 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTL 706

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy Swiss-Prot
Match: A0A1D6IEG9 (Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4577 GN=CRP1 PE=1 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 9.9e-188
Identity = 348/665 (52.33%), Postives = 464/665 (69.77%), Query Frame = 0 

Query: 57  CSTSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSE 116
           C+TSS         +  VS  + RYDF PLL +LS SP+                 S S 
Sbjct: 23  CTTSS-------VTSSSVSIPASRYDFEPLLAYLS-SPSV----------------SASL 82

Query: 117 SDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFS 176
           +  + P S+   E +LA +Y AVP+  WH+LL+ L AS +S+ L +A++ +L +H LCF 
Sbjct: 83  TSPSPPASVPAPEHRLAASYSAVPSHEWHALLRDLAASDASLPLAFALLPFLHRHRLCFP 142

Query: 177 YELLYSILIHALGRSEKLYEAFIL-----SQSQTLTPLTYNALIGACARNNDSEKALNLI 236
            +LL S L+H+L  S +L    +L     S S   +PL  N+L+ A A  +    AL L+
Sbjct: 143 LDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRLL 202

Query: 237 SRMRQDGYQSDFVNYSLIIQSLTRT-NKIDVPILQKLYEEIESDKIELDGQLLNDIILGF 296
           S +R+  +  D  +YS ++ SL  T +  D  +L++L  ++   ++E D  L +D+I  F
Sbjct: 203 SLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAF 262

Query: 297 AKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIF-EEMKEGGLKPR 356
           A+A  P+ AL  L+  QA GL P+++   A+ISALG  GR  EAEA+F E    G +KPR
Sbjct: 263 ARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPR 322

Query: 357 IKAFNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLK 416
            +A+NALLKGY +  SLK AE ++ EM + G++PDE TY LLVDAY   G W+SAR LLK
Sbjct: 323 TRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLK 382

Query: 417 QMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFN 476
           +MEA  V+P++++FSRILA +RDRG+WQK F VLREM+   V+PDRHFYNVMIDTFGK+N
Sbjct: 383 EMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYN 442

Query: 477 CVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYN 536
           C+ HAM+ + +M  EGIEPDVVTWNTLID H K G H+RAAELFEEM+E    P  TTYN
Sbjct: 443 CLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYN 502

Query: 537 IMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSA 596
           IMIN LGEQE W+ V+ +L +M+ QGL+PN+ITYTTLVD+YG+SGR+ +AI+C+EAMK+ 
Sbjct: 503 IMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKAD 562

Query: 597 GLKPSSTMYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEA 656
           GLKPS TMY+AL+NA+AQ+     A+N  + M++DGL+ S+L LNSLINAFGEDRR +EA
Sbjct: 563 GLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEA 622

Query: 657 FTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSA 710
           F++LQ+M+EN ++PDV+TYTTLMKALIRVE+FDKVP +YEEMI SGC PD KARAMLRS 
Sbjct: 623 FSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSG 663

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy Swiss-Prot
Match: Q84ZD2 (Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0548300 PE=3 SV=1)

HSP 1 Score: 647.9 bits (1670), Expect = 1.3e-184
Identity = 348/669 (52.02%), Postives = 460/669 (68.76%), Query Frame = 0 

Query: 57  CSTSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSE 116
           CSTSS             S  + RYDF PLL +LS                     + S 
Sbjct: 25  CSTSS-------------SPSATRYDFDPLLSYLS---------------------TTSS 84

Query: 117 SDKASPTSLDP-TEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCF 176
           S    PTS+ P TE +LA +Y AVPA  WH+LL+ L A+ +S+ L +A++ +L +H LCF
Sbjct: 85  SPSPPPTSVLPVTESRLAASYAAVPAREWHALLRELAATDASLPLAFALLPFLHRHRLCF 144

Query: 177 SYELLYSILIHALGRSEKLYEAFIL-----SQSQTLTPLTYNALIGACARNNDSEKALNL 236
             +LL S L+H+L  S +L    +L     S S   +PL  N+L+ A A  +    AL L
Sbjct: 145 PLDLLLSSLLHSLSVSGRLLPHSLLLSFPPSLSDPPSPLLLNSLLAASAAASRPAVALRL 204

Query: 237 ISRMRQDGYQSDFVNYSLIIQSLTRT-NKIDVPILQKLYEEIESDKIELDGQLLNDIILG 296
           +  +R+  +  D  +YS ++ SL  T +  D  +L +L  ++   ++E D  L +D+I  
Sbjct: 205 LGLLREHSFLPDLASYSHLLASLLNTRDPPDAALLDRLLGDLRESRLEPDAPLFSDLISA 264

Query: 297 FAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIF-EEMKEGGLKP 356
           FA+A  P+ AL  L+  QA GL P+++   A+IS+LG+  R  EAEA+F E    G +KP
Sbjct: 265 FARARLPDAALELLASAQAIGLTPRSNAVTALISSLGSARRVAEAEALFLEFFLAGEIKP 324

Query: 357 RIKAFNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLL 416
           R +A+NALLKGY K GSLK AE ++ EM + G++PDE TY LLVDAY   G W+SAR LL
Sbjct: 325 RTRAYNALLKGYVKIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILL 384

Query: 417 KQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKF 476
           K+MEA  V+P++++FSRILA +RDRGEWQK F VLREM    V+PDRHFYNVMIDTFGK+
Sbjct: 385 KEMEADGVKPSSYVFSRILAGFRDRGEWQKAFAVLREMHASGVRPDRHFYNVMIDTFGKY 444

Query: 477 NCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCP--- 536
           NC+ HAM+ ++RM  EGIEPDVVTWNTLID H K G H+RA ELF+EM+E     CP   
Sbjct: 445 NCLGHAMDAFDRMREEGIEPDVVTWNTLIDAHCKGGRHDRAIELFDEMRESN---CPLGT 504

Query: 537 TTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEA 596
           TTYNIMIN LGE+++W+ V+ +L +M+ QGL+PN+ITYTTLVD+YG+SGRF +A++C+EA
Sbjct: 505 TTYNIMINLLGEEQRWEGVEAMLAEMKEQGLVPNIITYTTLVDVYGRSGRFKEAVDCIEA 564

Query: 597 MKSAGLKPSSTMYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRR 656
           MK+ GLKPS TMY+AL+NA+AQ+     A+N  + MR+DGL+ S + LNSLINAFGEDRR
Sbjct: 565 MKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLINAFGEDRR 624

Query: 657 DIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAM 710
             EAF++LQ+MKEN ++PDV+TYTTLMKALIRVE+F+KVP +YEEMI SGC PD KARAM
Sbjct: 625 IAEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFEKVPVIYEEMITSGCAPDRKARAM 656

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 3.4e-55
Identity = 154/596 (25.84%), Postives = 260/596 (43.62%), Query Frame = 0 

Query: 146 SLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELLYSILIHALGRSEK------LYEAFI 205
           SLLK+L   S       A++ W  K     +  L   +++ ALGR  +      L +   
Sbjct: 109 SLLKAL-ELSGHWEWALALLRWAGKEGAADASAL--EMVVRALGREGQHDAVCALLDETP 168

Query: 206 LSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKI 265
           L     L    Y  ++ A +R    E+AL L + +R+ G     V Y++++    R  + 
Sbjct: 169 LPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGR- 228

Query: 266 DVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFV 325
             P +  L +E+ +  +E DG   + +I    + G  + A+ F   ++A G  P   T+ 
Sbjct: 229 SWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYN 288

Query: 326 AIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAESIVSEMEKS 385
           A++   G  G   EA  +  EM++ G +P    +N L   YA+ G  +EA   +  M   
Sbjct: 289 ALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASK 348

Query: 386 GLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKT 445
           GL P+  TY  ++ AY NVG    A  L  QM+     PN   ++ +L     +  +   
Sbjct: 349 GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVM 408

Query: 446 FEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDC 505
            E+L EM      P+R  +N M+   GK    D+     E M S G+E    T+NTLI  
Sbjct: 409 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 468

Query: 506 HRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPN 565
           + + G    A +++ EM   G+ PC TTYN ++N L  Q  W   + ++ KM+++G  PN
Sbjct: 469 YGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPN 528

Query: 566 VITYTTLVDIYGQSG------------------------------------RFNDAIECL 625
             +Y+ L+  Y + G                                    R +      
Sbjct: 529 EQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAF 588

Query: 626 EAMKSAGLKPSSTMYNALINAFAQ-----KAVNAYRVMRSDGLKPSLLALNSLINAFGED 685
           + +K+ G  P   ++N++++ +A+     KA   +  ++  GL P L+  NSL++ + + 
Sbjct: 589 QEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKC 648

Query: 686 RRDIEAFTILQYMK-ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTP 694
               EA  IL  +K    +KPDVV+Y T++    +     +   V  EM+  G  P
Sbjct: 649 SESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAP 700

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.2e-53
Identity = 128/504 (25.40%), Postives = 246/504 (48.81%), Query Frame = 0 

Query: 209 LTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLY 268
           +TYNAL+    +++  ++A+ +++ M  +G+    V Y+ +I +  R   +D  +  +L 
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM--ELK 374

Query: 269 EEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNY 328
            ++     + D      ++ GF +AG    A+     ++ +G  P   TF A I   GN 
Sbjct: 375 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 434

Query: 329 GRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTY 388
           G+  E   IF+E+   GL P I  +N LL  + + G   E   +  EM+++G  P+  T+
Sbjct: 435 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 494

Query: 389 GLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKN 448
             L+ AY+  GS++ A  + ++M    V P+   ++ +LA+    G W+++ +VL EM++
Sbjct: 495 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 554

Query: 449 CNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHER 508
              KP+   Y  ++  +     +       E + S  IEP  V   TL+    K      
Sbjct: 555 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 614

Query: 509 AAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVD 568
           A   F E++ERG+ P  TT N M++  G ++   +   +L  M+ +G  P++ TY +L+ 
Sbjct: 615 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 674

Query: 569 IYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQK-----AVNAYRVMRSDGLKP 628
           ++ +S  F  + E L  + + G+KP    YN +I A+ +      A   +  MR+ G+ P
Sbjct: 675 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 734

Query: 629 SLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVY 688
            ++  N+ I ++  D    EA  +++YM ++  +P+  TY +++    ++ + D+     
Sbjct: 735 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 794

Query: 689 EEM-ILSGCTPDGKARAMLRSALK 707
           E++  L    P G+   +L   +K
Sbjct: 795 EDLRNLDPHAPKGEDLRLLERIVK 816

[Close]
BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: XP_023546092.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023546093.1 pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1391 bits (3601), Expect = 0.0
Identity = 714/719 (99.30%), Postives = 714/719 (99.30%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
           MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60

Query: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120
           SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120

Query: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240
           YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420
           AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT
Sbjct: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480
           FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600
           WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA
Sbjct: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600

Query: 601 LINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660
           LINAFAQK     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND
Sbjct: 601 LINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 714
           VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 719

[Close]
BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: XP_022946456.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1389 bits (3596), Expect = 0.0
Identity = 712/719 (99.03%), Postives = 714/719 (99.30%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
           MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAA+TTSFSSVVTCSTS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTTSFSSVVTCSTS 60

Query: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120
           SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120

Query: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240
           YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420
           AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT
Sbjct: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480
           FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600
           WDEVK+LLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA
Sbjct: 541 WDEVKLLLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600

Query: 601 LINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660
           LINAFAQK     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND
Sbjct: 601 LINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 714
           VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 719

[Close]
BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: XP_022999638.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1388 bits (3593), Expect = 0.0
Identity = 712/719 (99.03%), Postives = 713/719 (99.17%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
           MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAA+T SFSSVVTCSTS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTASFSSVVTCSTS 60

Query: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120
           SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120

Query: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240
           YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420
           AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT
Sbjct: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480
           FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600
           WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA
Sbjct: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600

Query: 601 LINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660
           LINAFAQK     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND
Sbjct: 601 LINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 714
           VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 719

[Close]
BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: KAG6599105.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1370 bits (3545), Expect = 0.0
Identity = 702/711 (98.73%), Postives = 705/711 (99.16%), Query Frame = 0 

Query: 1    MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
            MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAA+TTSFSSVVTCSTS
Sbjct: 361  MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTTSFSSVVTCSTS 420

Query: 61   SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120
            SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA
Sbjct: 421  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 480

Query: 121  SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180
            SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL
Sbjct: 481  SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 540

Query: 181  YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240
            YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ
Sbjct: 541  YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 600

Query: 241  SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300
            SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL
Sbjct: 601  SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 660

Query: 301  YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
            YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 661  YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 720

Query: 361  AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420
            AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT
Sbjct: 721  AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 780

Query: 421  FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480
            FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER
Sbjct: 781  FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 840

Query: 481  MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540
            MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK
Sbjct: 841  MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 900

Query: 541  WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600
            WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA
Sbjct: 901  WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 960

Query: 601  LINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660
            LINAFAQK     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND
Sbjct: 961  LINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 1020

Query: 661  VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALK 706
            VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLR+ L+
Sbjct: 1021 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRTNLQ 1071

[Close]
BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match: XP_038883964.1 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 1294 bits (3349), Expect = 0.0
Identity = 668/720 (92.78%), Postives = 685/720 (95.14%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITT-HLSFPIISAAAASTTSFSSVVTCST 60
           MLLLSPLPLSTRFP  Q PSPTVFLHHQNP ITT HL FP ISA A   T+ SSVVTC T
Sbjct: 1   MLLLSPLPLSTRFPVIQFPSPTVFLHHQNPHITTTHLPFPFISATA---TTSSSVVTCYT 60

Query: 61  SSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDK 120
           SSDALELDVFEND VS QSR YDFTPLLDFLSRS  YPKSDSDSEVEF+S L+S S+SD 
Sbjct: 61  SSDALELDVFENDPVSLQSRHYDFTPLLDFLSRSSLYPKSDSDSEVEFNSTLNSGSDSDT 120

Query: 121 ASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYEL 180
           ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYEL
Sbjct: 121 ASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYEL 180

Query: 181 LYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGY 240
           LYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDGY
Sbjct: 181 LYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGY 240

Query: 241 QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA 300
           QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA
Sbjct: 241 QSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRA 300

Query: 301 LYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360
           LYFLSMVQASGLNPKTSTFVAIISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLKG
Sbjct: 301 LYFLSMVQASGLNPKTSTFVAIISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKG 360

Query: 361 YAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPN 420
           YA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQPN
Sbjct: 361 YARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPN 420

Query: 421 TFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYE 480
           +FIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY+
Sbjct: 421 SFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYD 480

Query: 481 RMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQE 540
           RMLSEGIEPDVVTWNTLIDCH KHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQE
Sbjct: 481 RMLSEGIEPDVVTWNTLIDCHCKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQE 540

Query: 541 KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN 600
           KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN
Sbjct: 541 KWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYN 600

Query: 601 ALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEN 660
           ALINAFAQ+     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAF+ILQYMKEN
Sbjct: 601 ALINAFAQRGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFSILQYMKEN 660

Query: 661 DVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 714
           DVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTLSL
Sbjct: 661 DVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLSL 717

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy TrEMBL
Match: A0A6J1G3R4 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450509 PE=4 SV=1)

HSP 1 Score: 1389 bits (3596), Expect = 0.0
Identity = 712/719 (99.03%), Postives = 714/719 (99.30%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
           MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAA+TTSFSSVVTCSTS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTTSFSSVVTCSTS 60

Query: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120
           SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120

Query: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240
           YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420
           AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT
Sbjct: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480
           FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600
           WDEVK+LLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA
Sbjct: 541 WDEVKLLLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600

Query: 601 LINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660
           LINAFAQK     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND
Sbjct: 601 LINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 714
           VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 719

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy TrEMBL
Match: A0A6J1KKB7 (pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493938 PE=4 SV=1)

HSP 1 Score: 1388 bits (3593), Expect = 0.0
Identity = 712/719 (99.03%), Postives = 713/719 (99.17%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
           MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAA+T SFSSVVTCSTS
Sbjct: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAATTASFSSVVTCSTS 60

Query: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120
           SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA
Sbjct: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSESDKA 120

Query: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180
           SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL
Sbjct: 121 SPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYELL 180

Query: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240
           YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ
Sbjct: 181 YSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDGYQ 240

Query: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300
           SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL
Sbjct: 241 SDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRAL 300

Query: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360
           YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY
Sbjct: 301 YFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGY 360

Query: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420
           AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT
Sbjct: 361 AKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNT 420

Query: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480
           FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER
Sbjct: 421 FIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYER 480

Query: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540
           MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK
Sbjct: 481 MLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEK 540

Query: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600
           WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA
Sbjct: 541 WDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNA 600

Query: 601 LINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660
           LINAFAQK     AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND
Sbjct: 601 LINAFAQKGLSEQAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKEND 660

Query: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 714
           VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL
Sbjct: 661 VKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLSL 719

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy TrEMBL
Match: A0A1S3CMJ2 (pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502629 PE=4 SV=1)

HSP 1 Score: 1276 bits (3302), Expect = 0.0
Identity = 659/722 (91.27%), Postives = 684/722 (94.74%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITT-HLSFPIISAAAASTTSFSSVVTCST 60
           MLLLSPLPLSTRFPAT L SP VFLHH NP ITT HLSF  ISAAAA+T+S  SVVTC T
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHHNPHITTTHLSFSFISAAAAATSS--SVVTCYT 60

Query: 61  SSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSD--SEVEFDSVLDSDSES 120
           SSD LE DVFE+D VS QSRRYDFTPLLDFLSRS AYPKSDSD  SEVEFD  L+S S+S
Sbjct: 61  SSDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDS 120

Query: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180
           D ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSY
Sbjct: 121 DTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240
           ELLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           G+QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPN
Sbjct: 241 GFQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPN 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           RALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALL
Sbjct: 301 RALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360

Query: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420
           KGYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQ
Sbjct: 361 KGYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480
           PNTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMET
Sbjct: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMET 480

Query: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540
           Y+RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGE
Sbjct: 481 YDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGE 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TM
Sbjct: 541 QEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATM 600

Query: 601 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660
           YNALINAFAQ+     AVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAF+ILQYMK
Sbjct: 601 YNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 714
           ENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTL
Sbjct: 661 ENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTL 720

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy TrEMBL
Match: A0A5A7T6H7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold119G00250 PE=4 SV=1)

HSP 1 Score: 1272 bits (3291), Expect = 0.0
Identity = 656/721 (90.98%), Postives = 681/721 (94.45%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPPITTHLSFPIISAAAASTTSFSSVVTCSTS 60
           MLLLSPLPLSTRFPAT L SP VFLHH     TTHLSF  ISAAAA+T+S  SVVTC TS
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPAVFLHHNPHITTTHLSFSFISAAAAATSS--SVVTCYTS 60

Query: 61  SDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSD--SEVEFDSVLDSDSESD 120
           SD LE DVFE+D VS QSRRYDFTPLLDFLSRS AYPKSDSD  SEVEFD  L+S S+SD
Sbjct: 61  SDNLEFDVFEDDPVSLQSRRYDFTPLLDFLSRSSAYPKSDSDTDSEVEFDFTLNSGSDSD 120

Query: 121 KASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSYE 180
            ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQKHNLCFSYE
Sbjct: 121 TASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQKHNLCFSYE 180

Query: 181 LLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQDG 240
           LLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQDG
Sbjct: 181 LLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDG 240

Query: 241 YQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNR 300
           +QSDFVNYSLIIQSLTRTNKID+PILQKLYEEIESDKIELDG LLNDIILGFAKAGDPNR
Sbjct: 241 FQSDFVNYSLIIQSLTRTNKIDIPILQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNR 300

Query: 301 ALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360
           ALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNALLK
Sbjct: 301 ALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLK 360

Query: 361 GYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQP 420
           GYA+KGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNVQP
Sbjct: 361 GYARKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQP 420

Query: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETY 480
           NTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAMETY
Sbjct: 421 NTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETY 480

Query: 481 ERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQ 540
           +RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLGEQ
Sbjct: 481 DRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQ 540

Query: 541 EKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMY 600
           EKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+TMY
Sbjct: 541 EKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMY 600

Query: 601 NALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKE 660
           NALINAFAQ+     AVNAYRVM SDGL+PSLLALNSLINAFGEDRRD+EAF+ILQYMKE
Sbjct: 601 NALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDMEAFSILQYMKE 660

Query: 661 NDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTLS 714
           NDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRTLS
Sbjct: 661 NDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRTLS 719

[Close]
BLAST of Cp4.1LG11g07920 vs. ExPASy TrEMBL
Match: A0A0A0KCZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358090 PE=4 SV=1)

HSP 1 Score: 1266 bits (3277), Expect = 0.0
Identity = 652/723 (90.18%), Postives = 679/723 (93.91%), Query Frame = 0 

Query: 1   MLLLSPLPLSTRFPATQLPSPTVFLHHQNPP--ITTHLSFPIISAAAASTTSFSSVVTCS 60
           MLLLSPLPLSTRFPAT L SP VFLHH + P   TTHLSF   SA A   TS SS+VTC 
Sbjct: 1   MLLLSPLPLSTRFPATHLSSPPVFLHHHHNPHIATTHLSFSFFSAPA---TSSSSLVTCY 60

Query: 61  TSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPK--SDSDSEVEFDSVLDSDSE 120
           TSSD LE DVFEND VS QSRRYDFTPLLDFLSRS AYPK  SDSDSEVEFDS  +S S+
Sbjct: 61  TSSDNLEFDVFENDPVSLQSRRYDFTPLLDFLSRSSAYPKFDSDSDSEVEFDSTFNSGSD 120

Query: 121 SDKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFS 180
           SD ASPTSLDPTEFQLAE YRAVPAPLWHSLLKSLC+SSSSIGLGYAVV WLQ+HNLCFS
Sbjct: 121 SDTASPTSLDPTEFQLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFS 180

Query: 181 YELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQ 240
           YELLYSILIHALGRSEKLYEAFILSQ QTLTPLTYNALIGACARNND EKALNL+SRMRQ
Sbjct: 181 YELLYSILIHALGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQ 240

Query: 241 DGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDP 300
           DG+QSDF+NYSLIIQSLTRTNKID+P+LQKLYEEIESDKIELDG LLNDIILGFAKAGDP
Sbjct: 241 DGFQSDFINYSLIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDP 300

Query: 301 NRALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360
           NRALYFLSMVQASGLNPKTSTFVA+ISALGN+GRTEEAEAIFEEMKEGGLKPRIKAFNAL
Sbjct: 301 NRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNAL 360

Query: 361 LKGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNV 420
           LKGYA+KGSLKEAESI+SEMEKSGLSPDEHTYGLLVDAYANVG W+SAR LLKQMEARNV
Sbjct: 361 LKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNV 420

Query: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAME 480
           QPNTFIFSRILASYRDRGEWQKTFEVLREMKN NVKPDRHFYNVMIDTFGKFNC+DHAME
Sbjct: 421 QPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAME 480

Query: 481 TYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLG 540
           TY+RMLSEGIEPDVVTWNTLIDCHRKHGYH+RAAELFEEMQERGY PCPTTYNIMINSLG
Sbjct: 481 TYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLG 540

Query: 541 EQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSST 600
           EQEKWDEVKILLGKMQSQGLLPNV+TYTTLVDIYG SGRFNDAI+CLEAMKSAGLKPS+T
Sbjct: 541 EQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSAT 600

Query: 601 MYNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYM 660
           MYNALINAFAQ+     AVNAYRVM SDGL+PSLLALNSLINAFGEDRRDIEAF+ILQYM
Sbjct: 601 MYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYM 660

Query: 661 KENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRT 714
           KENDVKPDVVTYTTLMKALIRV+KFDKVPAVYEEMILSGCTPDGKARAMLRSAL+YMKRT
Sbjct: 661 KENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKARAMLRSALRYMKRT 720

[Close]
BLAST of Cp4.1LG11g07920 vs. TAIR 10
Match: AT5G42310.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 959.1 bits (2478), Expect = 1.9e-279
Identity = 501/720 (69.58%), Postives = 587/720 (81.53%), Query Frame = 0 

Query: 1   MLLLSPLPL-STRFPATQLPSPTVFLHHQ--NPPITTHLSFPIISAAAASTTSFSSVVTC 60
           MLLL   PL STRF +    +     HH+   PPI+   +    S  + S +S SS  + 
Sbjct: 1   MLLLQQPPLVSTRFHSLYFLTHHHHHHHRFFQPPISAFSATTSASLPSPSPSSSSSYFSS 60

Query: 61  STSSDALELDVFENDHVSFQSRRYDFTPLLDFLSRSPAYPKSDSDSEVEFDSVLDSDSES 120
               D  E +  +N+  S   RRYDF+PLL FLSR            VE    LDS+SES
Sbjct: 61  WNGLDTNEEE--DNEFSSEVHRRYDFSPLLKFLSRF---------GPVEL--ALDSESES 120

Query: 121 DKASPTSLDPTEFQLAETYRAVPAPLWHSLLKSLCASSSSIGLGYAVVLWLQKHNLCFSY 180
           + ASP SL+P EF L E+YRAVPAP WHSL+KSL +S+SS+GL YAVV WLQKHNLCFSY
Sbjct: 121 E-ASPESLNPVEFDLVESYRAVPAPYWHSLIKSLTSSTSSLGLAYAVVSWLQKHNLCFSY 180

Query: 181 ELLYSILIHALGRSEKLYEAFILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 240
           ELLYSILIHALGRSEKLYEAF+LSQ QTLTPLTYNALIGACARNND EKALNLI++MRQD
Sbjct: 181 ELLYSILIHALGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQD 240

Query: 241 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 300
           GYQSDFVNYSL+IQSLTR+NKID  +L +LY+EIE DK+ELD QL+NDII+GFAK+GDP+
Sbjct: 241 GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPS 300

Query: 301 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 360
           +AL  L M QA+GL+ KT+T V+IISAL + GRT EAEA+FEE+++ G+KPR +A+NALL
Sbjct: 301 KALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALL 360

Query: 361 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 420
           KGY K G LK+AES+VSEMEK G+SPDEHTY LL+DAY N G W+SAR +LK+MEA +VQ
Sbjct: 361 KGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQ 420

Query: 421 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 480
           PN+F+FSR+LA +RDRGEWQKTF+VL+EMK+  VKPDR FYNV+IDTFGKFNC+DHAM T
Sbjct: 421 PNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT 480

Query: 481 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 540
           ++RMLSEGIEPD VTWNTLIDCH KHG H  A E+FE M+ RG  PC TTYNIMINS G+
Sbjct: 481 FDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGD 540

Query: 541 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 600
           QE+WD++K LLGKM+SQG+LPNV+T+TTLVD+YG+SGRFNDAIECLE MKS GLKPSSTM
Sbjct: 541 QERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTM 600

Query: 601 YNALINAFAQK-----AVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 660
           YNALINA+AQ+     AVNA+RVM SDGLKPSLLALNSLINAFGEDRRD EAF +LQYMK
Sbjct: 601 YNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 660

Query: 661 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPDGKARAMLRSALKYMKRTL 713
           EN VKPDVVTYTTLMKALIRV+KF KVP VYEEMI+SGC PD KAR+MLRSAL+YMK+TL
Sbjct: 661 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQTL 706

[Close]
BLAST of Cp4.1LG11g07920 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 211.1 bits (536), Expect = 3.0e-54
Identity = 128/504 (25.40%), Postives = 246/504 (48.81%), Query Frame = 0 

Query: 209 LTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLY 268
           +TYNAL+    +++  ++A+ +++ M  +G+    V Y+ +I +  R   +D  +  +L 
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM--ELK 374

Query: 269 EEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNY 328
            ++     + D      ++ GF +AG    A+     ++ +G  P   TF A I   GN 
Sbjct: 375 NQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNR 434

Query: 329 GRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAESIVSEMEKSGLSPDEHTY 388
           G+  E   IF+E+   GL P I  +N LL  + + G   E   +  EM+++G  P+  T+
Sbjct: 435 GKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETF 494

Query: 389 GLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKN 448
             L+ AY+  GS++ A  + ++M    V P+   ++ +LA+    G W+++ +VL EM++
Sbjct: 495 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMED 554

Query: 449 CNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHER 508
              KP+   Y  ++  +     +       E + S  IEP  V   TL+    K      
Sbjct: 555 GRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 614

Query: 509 AAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVD 568
           A   F E++ERG+ P  TT N M++  G ++   +   +L  M+ +G  P++ TY +L+ 
Sbjct: 615 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMY 674

Query: 569 IYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQK-----AVNAYRVMRSDGLKP 628
           ++ +S  F  + E L  + + G+KP    YN +I A+ +      A   +  MR+ G+ P
Sbjct: 675 MHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVP 734

Query: 629 SLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTTLMKALIRVEKFDKVPAVY 688
            ++  N+ I ++  D    EA  +++YM ++  +P+  TY +++    ++ + D+     
Sbjct: 735 DVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFV 794

Query: 689 EEM-ILSGCTPDGKARAMLRSALK 707
           E++  L    P G+   +L   +K
Sbjct: 795 EDLRNLDPHAPKGEDLRLLERIVK 816

[Close]
BLAST of Cp4.1LG11g07920 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 210.7 bits (535), Expect = 3.9e-54
Identity = 147/539 (27.27%), Postives = 245/539 (45.45%), Query Frame = 0 

Query: 212 NALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEI 271
           +AL  A   + D E   +L+         SD   Y  II+ L   N+ D  +    +   
Sbjct: 167 DALQNAIDFSGDDEMFHSLMLSFESKLCGSDDCTY--IIRELGNRNECDKAVGFYEFAVK 226

Query: 272 ESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAIISALGNYGRT 331
              +    G+L + +I    + G    A        A G       F A+ISA G  G  
Sbjct: 227 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 286

Query: 332 EEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKG-SLKEAESIVSEMEKSGLSPDEHTYGL 391
           EEA ++F  MKE GL+P +  +NA++    K G   K+      EM+++G+ PD  T+  
Sbjct: 287 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 346

Query: 392 LVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNCN 451
           L+   +  G W++AR L  +M  R ++ + F ++ +L +    G+    FE+L +M    
Sbjct: 347 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 406

Query: 452 VKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDVVTWNTLIDCHRKHGYHERAA 511
           + P+   Y+ +ID F K    D A+  +  M   GI  D V++NTL+  + K G  E A 
Sbjct: 407 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 466

Query: 512 ELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVITYTTLVDIY 571
           ++  EM   G      TYN ++   G+Q K+DEVK +  +M+ + +LPN++TY+TL+D Y
Sbjct: 467 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 526

Query: 572 GQSGRFNDAIECLEAMKSAGLKPSSTMYNALINAFAQ-----KAVNAYRVMRSDGLKPSL 631
            + G + +A+E     KSAGL+    +Y+ALI+A  +      AV+    M  +G+ P++
Sbjct: 527 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 586

Query: 632 LALNSLINAFG------------------------------EDRRDIEAF---------- 689
           +  NS+I+AFG                              E  R I+ F          
Sbjct: 587 VTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNR 646

[Close]
BLAST of Cp4.1LG11g07920 vs. TAIR 10
Match: AT3G22470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 5.1e-54
Identity = 140/509 (27.50%), Postives = 242/509 (47.54%), Query Frame = 0 

Query: 194 LYEAFILSQSQTL-TPLTYNALIGACARNNDSEKALNLISRMRQDGYQSDFVNYSLIIQS 253
           L+E+ I  QS+ L TP+ +N L  A AR    +  L     M  +G + D    +++I  
Sbjct: 57  LFESMI--QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINC 116

Query: 254 LTRTNKI--DVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPNRALYFLSMVQASG 313
             R  K+     +L + ++       E D    + ++ GF   G  + A+  +  +    
Sbjct: 117 YCRKKKLLFAFSVLGRAWKL----GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 176

Query: 314 LNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYAKKGSLKEAE 373
             P   T   +I+ L   GR  EA  + + M E G +P    +  +L    K G+   A 
Sbjct: 177 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 236

Query: 374 SIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQPNTFIFSRILASY 433
            +  +ME+  +      Y +++D+    GS+  A  L  +ME + ++ +   +S ++   
Sbjct: 237 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 296

Query: 434 RDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMETYERMLSEGIEPDV 493
            + G+W    ++LREM   N+ PD   ++ +ID F K   +  A E Y  M++ GI PD 
Sbjct: 297 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 356

Query: 494 VTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGEQEKWDEVKILLGK 553
           +T+N+LID   K      A ++F+ M  +G  P   TY+I+INS  + ++ D+   L  +
Sbjct: 357 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 416

Query: 554 MQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTMYNALI-----NAF 613
           + S+GL+PN ITY TLV  + QSG+ N A E  + M S G+ PS   Y  L+     N  
Sbjct: 417 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 476

Query: 614 AQKAVNAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMKENDVKPDVVTYTT 673
             KA+  +  M+   +   +   N +I+      +  +A+++   + +  VKPDVVTY  
Sbjct: 477 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 536

Query: 674 LMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           ++  L +     +   ++ +M   GCTPD
Sbjct: 537 MIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

[Close]
BLAST of Cp4.1LG11g07920 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 208.0 bits (528), Expect = 2.5e-53
Identity = 136/522 (26.05%), Postives = 245/522 (46.93%), Query Frame = 0 

Query: 183 ILIHALGRSEKLYEAF-----ILSQSQTLTPLTYNALIGACARNNDSEKALNLISRMRQD 242
           I +  LGR  +   A      I  Q   L    Y  ++ A +R    EKA++L  RM++ 
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239

Query: 243 GYQSDFVNYSLIIQSLTRTNKIDVPILQKLYEEIESDKIELDGQLLNDIILGFAKAGDPN 302
           G     V Y++I+    +  +    IL  L +E+ S  ++ D    + ++   A+ G   
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVL-DEMRSKGLKFDEFTCSTVLSACAREGLLR 299

Query: 303 RALYFLSMVQASGLNPKTSTFVAIISALGNYGRTEEAEAIFEEMKEGGLKPRIKAFNALL 362
            A  F + +++ G  P T T+ A++   G  G   EA ++ +EM+E         +N L+
Sbjct: 300 EAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELV 359

Query: 363 KGYAKKGSLKEAESIVSEMEKSGLSPDEHTYGLLVDAYANVGSWQSARQLLKQMEARNVQ 422
             Y + G  KEA  ++  M K G+ P+  TY  ++DAY   G    A +L   M+     
Sbjct: 360 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 419

Query: 423 PNTFIFSRILASYRDRGEWQKTFEVLREMKNCNVKPDRHFYNVMIDTFGKFNCVDHAMET 482
           PNT  ++ +L+    +    +  ++L +MK+    P+R  +N M+   G           
Sbjct: 420 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRV 479

Query: 483 YERMLSEGIEPDVVTWNTLIDCHRKHGYHERAAELFEEMQERGYFPCPTTYNIMINSLGE 542
           +  M S G EPD  T+NTLI  + + G    A++++ EM   G+  C TTYN ++N+L  
Sbjct: 480 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 539

Query: 543 QEKWDEVKILLGKMQSQGLLPNVITYTTLVDIYGQSGRFNDAIECLEAMKSAGLKPSSTM 602
           +  W   + ++  M+S+G  P   +Y+ ++  Y + G +         +K   + PS  +
Sbjct: 540 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 599

Query: 603 YNALINA-FAQKAV----NAYRVMRSDGLKPSLLALNSLINAFGEDRRDIEAFTILQYMK 662
              L+ A F  +A+     A+ + +  G KP ++  NS+++ F  +    +A  IL+ ++
Sbjct: 600 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 659

Query: 663 ENDVKPDVVTYTTLMKALIRVEKFDKVPAVYEEMILSGCTPD 695
           E+ + PD+VTY +LM   +R  +  K   + + +  S   PD
Sbjct: 660 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPD 700

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g07920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L8442.7e-27869.58Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidop... [more]
A0A1D6IEG99.9e-18852.33Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays OX=4... [more]
Q84ZD21.3e-18452.02Pentatricopeptide repeat-containing protein CRP1 homolog, chloroplastic OS=Oryza... [more]
B8Y6I03.4e-5525.84Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q9LYZ94.2e-5325.40Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
BLAST of Cp4.1LG11g07920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023546092.10.099.30pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita ... [more]
XP_022946456.10.099.03pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita ... [more]
XP_022999638.10.099.03pentatricopeptide repeat-containing protein At5g42310, chloroplastic [Cucurbita ... [more]
KAG6599105.10.098.73Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_038883964.10.092.78pentatricopeptide repeat-containing protein At5g42310, chloroplastic isoform X1 ... [more]
BLAST of Cp4.1LG11g07920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G3R40.099.03pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbit... [more]
A0A6J1KKB70.099.03pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Cucurbit... [more]
A0A1S3CMJ20.091.27pentatricopeptide repeat-containing protein At5g42310, mitochondrial OS=Cucumis ... [more]
A0A5A7T6H70.090.98Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A0A0KCZ60.090.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G358090 PE=4 SV=1[more]
BLAST of Cp4.1LG11g07920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G42310.11.9e-27969.58Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT5G02860.13.0e-5425.40Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G31400.13.9e-5427.27genomes uncoupled 1 [more]
AT3G22470.15.1e-5427.50Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G18940.12.5e-5326.05Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 317..348
e-value: 6.6E-7
score: 27.1
coord: 491..523
e-value: 1.1E-8
score: 32.7
coord: 561..594
e-value: 8.5E-8
score: 29.9
coord: 629..660
e-value: 5.3E-4
score: 18.0
coord: 423..454
e-value: 0.002
score: 16.1
coord: 386..420
e-value: 6.2E-6
score: 24.1
coord: 352..385
e-value: 3.6E-8
score: 31.1
coord: 210..240
e-value: 1.9E-6
score: 25.7
coord: 527..560
e-value: 3.8E-6
score: 24.7
coord: 661..694
e-value: 8.0E-8
score: 30.0
coord: 458..490
e-value: 1.3E-7
score: 29.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 350..397
e-value: 1.1E-11
score: 44.7
coord: 626..671
e-value: 1.1E-9
score: 38.3
coord: 488..535
e-value: 1.3E-14
score: 54.1
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 210..238
e-value: 8.9E-7
score: 28.8
coord: 317..345
e-value: 2.7E-5
score: 24.1
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 547..606
e-value: 1.3E-11
score: 44.4
coord: 407..467
e-value: 3.5E-8
score: 33.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 524..558
score: 10.533867
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 11.8273
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 454..488
score: 11.355965
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 489..523
score: 13.350921
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 207..241
score: 11.169622
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 419..453
score: 9.744654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 624..658
score: 8.966401
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 659..693
score: 11.542307
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..383
score: 12.145178
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 384..418
score: 11.761533
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 559..593
score: 12.441133
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 609..712
e-value: 5.5E-20
score: 73.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 412..484
e-value: 4.8E-14
score: 54.3
coord: 113..267
e-value: 8.0E-12
score: 47.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 506..608
e-value: 5.3E-28
score: 100.3
coord: 268..411
e-value: 2.7E-37
score: 130.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 294..584
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..126
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 122..713
NoneNo IPR availablePANTHERPTHR47942:SF23PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN CRP1 HOMOLOG, CHLOROPLASTICcoord: 122..713

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07920.1Cp4.1LG11g07920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010239 chloroplast mRNA processing
biological_process GO:0009658 chloroplast organization
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0042651 thylakoid membrane
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003727 single-stranded RNA binding