Cp4.1LG11g07410 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g07410
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RRM domain-containing protein
Location	Cp4.1LG11: 5833191 .. 5839484 (-)
RNA-Seq Expression	Cp4.1LG11g07410
Synteny	Cp4.1LG11g07410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTTCAGAAAATTGGATAATATGATAAACTGCCTTGCAAAACGGCCTCTATCTTCTTCTTCAGTGGAATAATCGTTTATCAGAGCAGAGATGCTCGATTCGCCGCCCCTTCACTGCCGTTTCATCACGACTTGGCCGTCAGTGCCACACAGTCGCCCTAACAACTCCCTTCTTCTCCCAACGCCTTACACCGCTCTCTACAATCTCCAACCTTGTAATTCCAATTCCACAAAATTCCGGTCACTCCATTTCAGTTTATCTCTTGTTCATGGCCCAAGACCAATGTGTTTTCCTGTTTCCGCACTGAAAAAGCGTGGAAAAGGCGGCGTTTCCCTAACTGACCAGAGTGATTCCGACAATGAATTCGACGGGGACGAGGACTTGGACGGAGATGAGATGCTTTTGCCGTTAGCGAACATGAGAGAGTGGCTTGCGGCGAGGCCTCGTGGATTCGGAGAGGGGAAGGAGTATGACACTTCGATTGAAGAGAAATTGCTACAAGAAATCGAGCAGAGTAGGAAAGCTCAGGCTGCAAATATCAATAAGCTCAAGAGTCAGCCTCCTTCCAACCCCAACTCTGGTAGAAATGTCGCAGATAAAGAAGGTCAGTCTCATTCTCCCTCAATTTTGTAACTCTTTATCCTCATGTCCTGTGGATAATAGGCAGTGCTTTGTTTCAAGTTACTAATCCGTGTGTGTGTAACCAATACCTCCACTAGCGAAAACTACATCACTTGGCTGCTAGATTAGGTTGCTTCCTCTAATCTCTATGTAATTTTAGGTTTCTCTCCTACATCGAACAATATAAATTACCAACCACATTGTTTAAGCTTCTTTGAATAATTTTGCCTCCAAGATTGACTAATGAAGAATTTGATGCCAGTGAATAGGTGTCACAAAGGATTATAGTGTGCTTATCCTTCTCATTAGTGGGATATGCCTTCTATTATTGGACAAGAGAATTAGTGACAAAACTCAGCTCAGGAGAGTGATAAAGTTGTGACATTGGTCAATTTCATAATCAGTTATGGGTGGACAACTTCATATTAGACTAGAGTCTTTTCCCAAAAGGTGGGAGACTAACCCTTATTCAGTTGGTTCTGAGTGACATTCCTACCTATTTTCTTTCCTGATTTGGAGTCCTTAGCTCGTGGCTAAGGGGTTTGACATTGGTATCCTGAGGGTGAGAAACATGACCCTTTTAGCTAAATGGCTCTGGCGATTCTATCATGAAGCTGATTCCTTACAACACAAGGTTATTGTTAGTAAGTATGCGCCTCATGTCTGGGATTGGATCGACGGTGGGGTCTAAGGCACCGATAGAAATCCTAGGAAAGATATCGCGTCTAGTTTTCCTTTGTTTTCCCAGTTTGTTCATAATGTGGTAGGGGATCAGAGGGATATTTATTTTTGGGAGGATAATAGGGGGGATAGATGCATCTAGTCTTTATTTTCTCGCTTATTTTAATTGTCCTCTTCGAAGAATCTCAGTTTTGTCGATATTTTCCATATTGAAGTCTCAACCTTCTCCTTCCTCGGATTTATGTCGTTGGTTGACCAATAGGGATGTTTTTGGTTTAAGCCTGATAGGTGAGATATTCGCCTTTGCATTCCTTGTCCTTCGAAAGGCTTTTCTTGTAGCTCTATCTTCCATTGCTTGTCCCATCTTTCCCCTACTAGCAGTTATGTTTTTCCTGATTTGAAAGGTGAAAATTTCCGAGAAGGTTAAGTTAGTTGTGTGGCAGGTTTTACACATAAGAGTTAACACCTTAGATTGGCTCTCAGCTAGAGGTGCTCTTATGGCGCGTTGGGCTGCATTGTCATATTCATTGTAGGAAGGCAGCTGAGGACCTTGATCATATTCTTTAGAGTTGTGATTTTTCTCGGGCCGTTTGGCATGGTATCTTTGAGCTGTTTCACTACATATTCTCTACATATTCTCTAGTTCATAGTCACCCATAAAAAAGCATACATTTGTCCCAATCTTATCAATAAAAAGCCAGCCTACAAGCATTGAAAAATATTAAGGCACCATGATGGGGCTGGTAGGGTATTCATGGTGTGGTAGTTGGATGACAGTCTGCCCTTTACAGGTCGAAGTTTCCCTAGCTAGCCAAAATGCTTTGAGCTATGTGCATTGCAGTTTTCTTCAATTGAGATACAATTATCCCCAAAAGTTGTTTTGCTCTATTAGTGAATGTGCAGAAGCCAATTTCTTGCATAATATTTGCCACGATGCCTATCCTTGACTTCTTGCATTCTGTCATATATGGTTTATGAAAGTTAAGCTATGCTAAAATGAGGGATCAATCATGGTCAGTTTAGTTGTTATGTCGCATCAGCTTCCTTATTCCAACCGATTGATTTTTCTTAAGTTGCGGGTCCACTTTAACCTTGTTAAACCAAGGAACTGTTTTAGTTCTTTGAAGATCTTGGGGTTGATCAATTCAATGTATAGCTTAGAAGGGCTTTCTACCACCTCTTGCCAGAATGATTTGGGCTGGGCTGGGTAGAACACGTTTTTTCACGTTGGCGTAAAAAATTATGCATTGATAAGTCTTCTAACTCCAAGCGTAGATGGCCTGTGTATTACTCCAATTTGTTGCCGTAGATTAAGATGTATCATCAAAGAAACCAATAAATAGTAATGTGAAATCTCCAAGAGTTATCTAATTTCAGTTAGAATCATGTTTTGAACATAACTTATTCTCATTAATGCACAAAATCAACCATTGTAGCTCTACCAAAATTCACATATTAAAAAAGAAAAGAAAAACAGTTCTATTGTCGTTTTCATTGGAGGCCCGTATTGAGTAGAACATGCTGAGTCTCCAAATTTAAGGTGCAATTTTATGAATTTAAAGTTTAGGGTAAATTGGTATACATTGAAAAATTCATGTGTCAAAATTGAATTTTCCAAAAAATAAAACTGCCACAAGTCATAGTATTAGAGTCTTATTATTACCCTGATATAATTGTGAAAAAATGAATAACGTCCTGTCTGATTTTTAGCCAGACTGTTGCACGAAATCTACTCTGGACTTCTATAATGGCTAATTATGAATGAACTTTTGTCATTCTAATTCTTAAATTGATCTAACCTCGAGTATCATGCATTTCTTCAGCTCCAGAAATTGCTAATACTGGAGTTCGTGTACGCGTTATCAACCTTCCTAAAAAAAGGAACATTCACAGGGATCTGATGTTGGCTTTCAAAGGGTTCCCTGGAATAGTCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCTGAAGGAGACGCCATCAGGTATGTTTTTGGATAATAAGAAACTATAGAACCAATTACAATTTTTCTCTTATCTTTTTCATAAGTTAGCTTCAAAATACCAAACTTATTTAGTCAAGAAAGGTAGCACTGCCGCAATAAAATTTGTGAAGACATTCTTATTGCCAAAACTCTTGAATGGTTTTTGGCTGGTTCTTCTTTCACTATTAAAGGGTTCTTCTAAAGGAAATTGCTAATGGTAGCTTCTGAAGGCACCTTTACGAACCTATGGGAAGCGATCTCTCTTTGCCTTCCAGATTTTCTTCTTTCACCACCTTTTCAGTAAGAATGGCGGTAGAGTTGTGGTAGGATATTTGGCTTTTGTTTTGGATCTCTCTCTTTACAGCTCCACTTCTTTGATCTCTGCCTCTATCTAAAAAATTTACAGTCTTGTATTGTTCACAAGTTGGAACAAACTCCTTTGATTTTCGGTTTCGTTGGGCTCTGAGAGACTAAGAAGTCAGTTTGATAAGGAATCAACCCAAGGGAAAGTTGATACCAAATGATAAGGAATCACTATAATGGAAAGTAAGATTTGGATTACCTTGTTGATCGAATATCTCAAGGTAAGAGCACTTGTTTGAGATTTGAATCACTCCACAATCAAGATTGATCATGTCAAGCTTGAATGATTCTGAAAATGCAACCTAAACTACATAGAAGTACAAAGAAAAGAAATTTTGCTATTGGCTAAAGGAAAGCAAAAACGCTCATTTTACTACATTTTCCAAGTTTCTCTACAAAGATAACATAAATGACTTTATGTAGCCTCAAAATGAAAACTCTTAGCCTTTCATGAGTTATTTCAAGAGTTGTAACTTTCATATTTTATGGCTATAATTAACCACTATGTAAATTTTATGGCTATAATTAGCCACTCGGTAAATTTTATCTTAAAGTAAATAAAAGCCTTAAAATACATTAAAGAAACACAATAACTCTAGATTAACATTCACCCAAAATTTGTCCATCTAAGAATAAATGAAGCTTGATTCTTCCTTAATGTGGCATGAATTGCAACATCTTGTGATAATTTGAACAACATTTTCTTCACATCTTTTTTAAAGTTTATATTGCATGATTGATGCCTTGATTCATATCACAGTTTCTTTTGTCTTTACTTCAACCATTGGTTCCTTCACCTAGGTATGGAGACCTACGTTTGTGTGCCTCTTTGTACTTCGTTCTTTTATCTTCTTCATAAAATTTAGTTTTCCTAAAATAAAAATGTGATGCCTATTTACAATTGTGCATTCTGAGATCATCAGGTGCTAGCTATATAAATTTGTACATGCTGAAACCATCACAGCTTTACATGTCTTGGCATTATGTTTATGAACTTGAATAGTTTCTAGGTTTCATATAAACATGGCACAACATTTTATGCATCTATATTCCTTAATAAATTGGTAAAAAGTGTGTTATTCATTGGTTCTTCAGTTTCTTGCAATCATTTTCTGGACAATATCTTACGTTTGGAAGGGTTCAGAAGCAAATAAAATGTGAAATAATGAATCAACAAACTTCCAATTCGGCTCGTGAAATTTCGGTGGTTAGTACCAATCGTTCTCGACTAAGTATTCTTGAAGAGGAAGCAGGGCAGGTTGCTGATATGGACATGGATTTAGCCGGTGAAGTCGAAAGAACAAGGGTGGAGGATATTGAAGACAATTTAGCATATGTTAGTGAATTACACTCGGATGATGAGGACGATAATGGTGTCGAATCAAGAACAGAGTCCAAAATTCTGCCACCATCGGAAAAGGAACTAGATAAAATCCACGAACTAGAAGAAATTCCTCCTCAAGGAAGAGAGGAAGTTCATAGAGAAGCTCCACCTATCAATATGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAATCATCGCTAGTTATTCCAGGATCTGCGAAAAGGTCTTGCTGCATCAAGTGATTGTTTATAATATGGTTTTACATTTTATGCTTTGAAAAACTAACTTAATGTGCTTTCTATGTTAGCGCAGGCTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAAAAAATCAGCCGTGGCTTCAAAAGAAGGGAACTAATTGGAGTGGATACTCTCTGAAATTAATAACGTAAGAACTTTAACCAAAAACTCATGTGAGATGTGATTACAAAGCATAAACTTCATTTTCTGGGTGATTTATACAAATCCAACTAGTTCAGCTAGGTCCCTTGTATGGATTTGTGATACTTATATTTTGGTCTTAGTATAACTCATCCCCTCTTCCGAATTCCTGGTTCATTGACTGTAATAACTAAAAAGTCTTAATTCTTTTGTTCAATTTGGTTATGCTGCAGCAAATAGGCTGATAAAAGACGCAACAACAGCGATGTCTCTTGCCTCCATCGAGTGTATTGTTATGTCATGTAAAATTCCTGACAAGCATGAGATTTATCATGTTGAAGTAGTTGGAATCACATATCTTTCAGGAAAGGTTTTGTTTAGAAAGAAATTTGGAGTTTATGACAGTTGAGAGTTTTTGAAGTTCGTTGGTTGAGTTGTGTCGGGTGAATTTGGTCTGTAAAATTGTGCGATCCTCAAACGGAATGCCAATCCATCTAATATTTATATTCGATTGGTTTGAGTTCGTTGCATCGTTGACGAAGGCAATAACTATATGTAGCAGTTGCTTGCCTGCAGAATCATTATAACTGTAAATCAATGAGCAACTTGTTTCTGCCTTCTATTAAATTATGTTAGCATTGCTGTAAATTAGTAAGCTCGGTTAGATCTTTTGGTTATGAGCTATTGTAATTATTTGTGTTATGTAAGTTGCAGAGTAGTTCCTTTTTGTTATTTCCCATGGCTCATCTATTGAAGTGAGCTTCCTTTAGCTTTGTAAATCATCAAGAATACTTAGAGAATACTCTGCCA

mRNA sequence

TATCTTCAGAAAATTGGATAATATGATAAACTGCCTTGCAAAACGGCCTCTATCTTCTTCTTCAGTGGAATAATCGTTTATCAGAGCAGAGATGCTCGATTCGCCGCCCCTTCACTGCCGTTTCATCACGACTTGGCCGTCAGTGCCACACAGTCGCCCTAACAACTCCCTTCTTCTCCCAACGCCTTACACCGCTCTCTACAATCTCCAACCTTGTAATTCCAATTCCACAAAATTCCGGTCACTCCATTTCAGTTTATCTCTTGTTCATGGCCCAAGACCAATGTGTTTTCCTGTTTCCGCACTGAAAAAGCGTGGAAAAGGCGGCGTTTCCCTAACTGACCAGAGTGATTCCGACAATGAATTCGACGGGGACGAGGACTTGGACGGAGATGAGATGCTTTTGCCGTTAGCGAACATGAGAGAGTGGCTTGCGGCGAGGCCTCGTGGATTCGGAGAGGGGAAGGAGTATGACACTTCGATTGAAGAGAAATTGCTACAAGAAATCGAGCAGAGTAGGAAAGCTCAGGCTGCAAATATCAATAAGCTCAAGAGTCAGCCTCCTTCCAACCCCAACTCTGGTAGAAATGTCGCAGATAAAGAAGCTCCAGAAATTGCTAATACTGGAGTTCGTGTACGCGTTATCAACCTTCCTAAAAAAAGGAACATTCACAGGGATCTGATGTTGGCTTTCAAAGGGTTCCCTGGAATAGTCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCTGAAGGAGACGCCATCAGTTTCTTGCAATCATTTTCTGGACAATATCTTACGTTTGGAAGGGTTCAGAAGCAAATAAAATGTGAAATAATGAATCAACAAACTTCCAATTCGGCTCGTGAAATTTCGGTGGTTAGTACCAATCGTTCTCGACTAAGTATTCTTGAAGAGGAAGCAGGGCAGGTTGCTGATATGGACATGGATTTAGCCGGTGAAGTCGAAAGAACAAGGGTGGAGGATATTGAAGACAATTTAGCATATGTTAGTGAATTACACTCGGATGATGAGGACGATAATGGTGTCGAATCAAGAACAGAGTCCAAAATTCTGCCACCATCGGAAAAGGAACTAGATAAAATCCACGAACTAGAAGAAATTCCTCCTCAAGGAAGAGAGGAAGTTCATAGAGAAGCTCCACCTATCAATATGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAATCATCGCTAGTTATTCCAGGATCTGCGAAAAGGCTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAAAAAATCAGCCGTGGCTTCAAAAGAAGGGAACTAATTGGAGTGGATACTCTCTGAAATTAATAACCAAATAGGCTGATAAAAGACGCAACAACAGCGATGTCTCTTGCCTCCATCGAGTGTATTGTTATGTCATGTAAAATTCCTGACAAGCATGAGATTTATCATGTTGAAGTAGTTGGAATCACATATCTTTCAGGAAAGGTTTTGTTTAGAAAGAAATTTGGAGTTTATGACAGTTGAGAGTTTTTGAAGTTCGTTGGTTGAGTTGTGTCGGGTGAATTTGGTCTGTAAAATTGTGCGATCCTCAAACGGAATGCCAATCCATCTAATATTTATATTCGATTGGTTTGAGTTCGTTGCATCGTTGACGAAGGCAATAACTATATGTAGCAGTTGCTTGCCTGCAGAATCATTATAACTGTAAATCAATGAGCAACTTGTTTCTGCCTTCTATTAAATTATGTTAGCATTGCTGTAAATTAGTAAGCTCGGTTAGATCTTTTGGTTATGAGCTATTGTAATTATTTGTGTTATGTAAGTTGCAGAGTAGTTCCTTTTTGTTATTTCCCATGGCTCATCTATTGAAGTGAGCTTCCTTTAGCTTTGTAAATCATCAAGAATACTTAGAGAATACTCTGCCA

Coding sequence (CDS)

ATGCTCGATTCGCCGCCCCTTCACTGCCGTTTCATCACGACTTGGCCGTCAGTGCCACACAGTCGCCCTAACAACTCCCTTCTTCTCCCAACGCCTTACACCGCTCTCTACAATCTCCAACCTTGTAATTCCAATTCCACAAAATTCCGGTCACTCCATTTCAGTTTATCTCTTGTTCATGGCCCAAGACCAATGTGTTTTCCTGTTTCCGCACTGAAAAAGCGTGGAAAAGGCGGCGTTTCCCTAACTGACCAGAGTGATTCCGACAATGAATTCGACGGGGACGAGGACTTGGACGGAGATGAGATGCTTTTGCCGTTAGCGAACATGAGAGAGTGGCTTGCGGCGAGGCCTCGTGGATTCGGAGAGGGGAAGGAGTATGACACTTCGATTGAAGAGAAATTGCTACAAGAAATCGAGCAGAGTAGGAAAGCTCAGGCTGCAAATATCAATAAGCTCAAGAGTCAGCCTCCTTCCAACCCCAACTCTGGTAGAAATGTCGCAGATAAAGAAGCTCCAGAAATTGCTAATACTGGAGTTCGTGTACGCGTTATCAACCTTCCTAAAAAAAGGAACATTCACAGGGATCTGATGTTGGCTTTCAAAGGGTTCCCTGGAATAGTCAATATAACTCCTGCAGTCATTGGAAACAAAAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCTGAAGGAGACGCCATCAGTTTCTTGCAATCATTTTCTGGACAATATCTTACGTTTGGAAGGGTTCAGAAGCAAATAAAATGTGAAATAATGAATCAACAAACTTCCAATTCGGCTCGTGAAATTTCGGTGGTTAGTACCAATCGTTCTCGACTAAGTATTCTTGAAGAGGAAGCAGGGCAGGTTGCTGATATGGACATGGATTTAGCCGGTGAAGTCGAAAGAACAAGGGTGGAGGATATTGAAGACAATTTAGCATATGTTAGTGAATTACACTCGGATGATGAGGACGATAATGGTGTCGAATCAAGAACAGAGTCCAAAATTCTGCCACCATCGGAAAAGGAACTAGATAAAATCCACGAACTAGAAGAAATTCCTCCTCAAGGAAGAGAGGAAGTTCATAGAGAAGCTCCACCTATCAATATGAAAACTAAGGTTTCAAAGAAGAAGCAACCTAAGGAAAAAGGAGAGAAGAAATCATCGCTAGTTATTCCAGGATCTGCGAAAAGGCTAAGGATAAAGGAGAAGGCTGTCTTAACTGACGTGTACTCAAGATATGGAAAAAAATCAGCCGTGGCTTCAAAAGAAGGGAACTAA

Protein sequence

MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVHGPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGVRVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMDMDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEIPPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSRYGKKSAVASKEGN

Homology

[Close]

BLAST of Cp4.1LG11g07410 vs. NCBI nr
Match: XP_023547227.1 (uncharacterized protein LOC111806104 [Cucurbita pepo subsp. pepo] >XP_023547228.1 uncharacterized protein LOC111806104 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 842 bits (2176), Expect = 9.22e-308
Identity = 433/433 (100.00%), Postives = 433/433 (100.00%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH
Sbjct: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV
Sbjct: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD
Sbjct: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI
Sbjct: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420
           PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR
Sbjct: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420

Query: 421 YGKKSAVASKEGN 433
           YGKKSAVASKEGN
Sbjct: 421 YGKKSAVASKEGN 433

[Close]

BLAST of Cp4.1LG11g07410 vs. NCBI nr
Match: XP_022946475.1 (uncharacterized protein LOC111450524 [Cucurbita moschata] >XP_022946476.1 uncharacterized protein LOC111450524 [Cucurbita moschata])

HSP 1 Score: 810 bits (2093), Expect = 4.11e-295
Identity = 417/433 (96.30%), Postives = 423/433 (97.69%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRF TTWPS PHSR N SLLLPTPYTA YNLQPCN NSTKFRSLHFSLSLVH
Sbjct: 1   MLDSPPLHCRFFTTWPSAPHSRLNTSLLLPTPYTAPYNLQPCNPNSTKFRSLHFSLSLVH 60

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNV DKEAPEIANTGV
Sbjct: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVVDKEAPEIANTGV 180

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVR+INLPKKRNIHRDLMLAF+GFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 181 RVRIINLPKKRNIHRDLMLAFEGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEA QVAD+D
Sbjct: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAEQVADID 300

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVED+EDNLAYVSEL SDDEDDNGVESRTESKILP SEKELDKIHELEE+
Sbjct: 301 MDLAGEVERTRVEDVEDNLAYVSELDSDDEDDNGVESRTESKILPLSEKELDKIHELEEM 360

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420
           PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR
Sbjct: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420

Query: 421 YGKKSAVASKEGN 433
           YGKKSA+ASKEGN
Sbjct: 421 YGKKSALASKEGN 433

[Close]

BLAST of Cp4.1LG11g07410 vs. NCBI nr
Match: XP_022999318.1 (uncharacterized protein LOC111493728 [Cucurbita maxima] >XP_022999319.1 uncharacterized protein LOC111493728 [Cucurbita maxima])

HSP 1 Score: 786 bits (2029), Expect = 4.57e-285
Identity = 411/433 (94.92%), Postives = 416/433 (96.07%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRFITTWPS PHSR NNSLLLPTPY   YNLQPCN NSTKFRSLHFSLSLVH
Sbjct: 23  MLDSPPLHCRFITTWPSAPHSRRNNSLLLPTPY---YNLQPCNPNSTKFRSLHFSLSLVH 82

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPM FPV +LKKRGKGGVSLT+QSDSD EFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 83  GPRPMYFPVFSLKKRGKGGVSLTNQSDSDIEFDGDEDLDGDEMLLPLANMREWLAARPRG 142

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNS RNV DKEAPEIANTGV
Sbjct: 143 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSSRNVVDKEAPEIANTGV 202

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 203 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 262

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSN AREISVVSTN SRLSILEE+A QVADMD
Sbjct: 263 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNLAREISVVSTNHSRLSILEEKAEQVADMD 322

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVEDIEDNLAYVSELHSDD DDNGVESRTESKILPPSEKELDKIHELEEI
Sbjct: 323 MDLAGEVERTRVEDIEDNLAYVSELHSDD-DDNGVESRTESKILPPSEKELDKIHELEEI 382

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420
           PPQGREEVHREAPPI MKT+VSKKKQPKEKGE KSSLVIPGSAKRLRIKEKAVLTDVYSR
Sbjct: 383 PPQGREEVHREAPPIYMKTRVSKKKQPKEKGENKSSLVIPGSAKRLRIKEKAVLTDVYSR 442

Query: 421 YGKKSAVASKEGN 433
           YGKKSA+ASKEGN
Sbjct: 443 YGKKSALASKEGN 451

[Close]

BLAST of Cp4.1LG11g07410 vs. NCBI nr
Match: KAG6599035.1 (hypothetical protein SDJN03_08813, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 781 bits (2016), Expect = 1.71e-283
Identity = 402/417 (96.40%), Postives = 407/417 (97.60%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRF TTWPS PHSR N SLLLPTPYTA YNLQPCN NSTKFRSLHFSLSLVH
Sbjct: 1   MLDSPPLHCRFFTTWPSAPHSRLNTSLLLPTPYTAPYNLQPCNPNSTKFRSLHFSLSLVH 60

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNV DKEAPEIANTGV
Sbjct: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVVDKEAPEIANTGV 180

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVR+INLPKKRNIHRDLMLAF+GFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 181 RVRIINLPKKRNIHRDLMLAFEGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEA QVAD+D
Sbjct: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAEQVADID 300

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVEDIEDNLAYVSEL SDDEDDNGVESRTESKILP SEKELDKIHEL+E+
Sbjct: 301 MDLAGEVERTRVEDIEDNLAYVSELDSDDEDDNGVESRTESKILPLSEKELDKIHELDEM 360

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDV 417
           PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDV
Sbjct: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDV 417

[Close]

BLAST of Cp4.1LG11g07410 vs. NCBI nr
Match: KAG7029987.1 (hypothetical protein SDJN02_08331 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 778 bits (2010), Expect = 5.02e-282
Identity = 401/417 (96.16%), Postives = 405/417 (97.12%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRF TTWPS PHSR N SLLLPTPYTA YNLQPCN NSTKFRSLHFSLSLVH
Sbjct: 1   MLDSPPLHCRFFTTWPSAPHSRHNTSLLLPTPYTAPYNLQPCNPNSTKFRSLHFSLSLVH 60

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPMCFPVSALKKRGKGGVSLTDQSDS NEFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSYNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDT+IEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNV DKEAPEIANTGV
Sbjct: 121 FGEGKEYDTAIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVVDKEAPEIANTGV 180

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVR+INLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 181 RVRIINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAR ISVVSTNRSRLSILEEEA QVAD+D
Sbjct: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSARGISVVSTNRSRLSILEEEAEQVADID 300

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVEDIEDNLAYVSEL SDDEDDNGVESRTESKILPPSEKELDKIHELEE+
Sbjct: 301 MDLAGEVERTRVEDIEDNLAYVSELDSDDEDDNGVESRTESKILPPSEKELDKIHELEEM 360

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDV 417
           PPQGREEVHREAPPINMKTKVSKKKQPKEKGEK SSLVIPGSAKRLRIKEKAVLTDV
Sbjct: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKNSSLVIPGSAKRLRIKEKAVLTDV 417

[Close]

BLAST of Cp4.1LG11g07410 vs. ExPASy TrEMBL
Match: A0A6J1G3T4 (uncharacterized protein LOC111450524 OS=Cucurbita moschata OX=3662 GN=LOC111450524 PE=4 SV=1)

HSP 1 Score: 810 bits (2093), Expect = 1.99e-295
Identity = 417/433 (96.30%), Postives = 423/433 (97.69%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRF TTWPS PHSR N SLLLPTPYTA YNLQPCN NSTKFRSLHFSLSLVH
Sbjct: 1   MLDSPPLHCRFFTTWPSAPHSRLNTSLLLPTPYTAPYNLQPCNPNSTKFRSLHFSLSLVH 60

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNV DKEAPEIANTGV
Sbjct: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVVDKEAPEIANTGV 180

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVR+INLPKKRNIHRDLMLAF+GFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 181 RVRIINLPKKRNIHRDLMLAFEGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEA QVAD+D
Sbjct: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAEQVADID 300

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVED+EDNLAYVSEL SDDEDDNGVESRTESKILP SEKELDKIHELEE+
Sbjct: 301 MDLAGEVERTRVEDVEDNLAYVSELDSDDEDDNGVESRTESKILPLSEKELDKIHELEEM 360

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420
           PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR
Sbjct: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420

Query: 421 YGKKSAVASKEGN 433
           YGKKSA+ASKEGN
Sbjct: 421 YGKKSALASKEGN 433

[Close]

BLAST of Cp4.1LG11g07410 vs. ExPASy TrEMBL
Match: A0A6J1KJD4 (uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728 PE=4 SV=1)

HSP 1 Score: 786 bits (2029), Expect = 2.21e-285
Identity = 411/433 (94.92%), Postives = 416/433 (96.07%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDSPPLHCRFITTWPS PHSR NNSLLLPTPY   YNLQPCN NSTKFRSLHFSLSLVH
Sbjct: 23  MLDSPPLHCRFITTWPSAPHSRRNNSLLLPTPY---YNLQPCNPNSTKFRSLHFSLSLVH 82

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAARPRG 120
           GPRPM FPV +LKKRGKGGVSLT+QSDSD EFDGDEDLDGDEMLLPLANMREWLAARPRG
Sbjct: 83  GPRPMYFPVFSLKKRGKGGVSLTNQSDSDIEFDGDEDLDGDEMLLPLANMREWLAARPRG 142

Query: 121 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTGV 180
           FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNS RNV DKEAPEIANTGV
Sbjct: 143 FGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSSRNVVDKEAPEIANTGV 202

Query: 181 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 240
           RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI
Sbjct: 203 RVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDAI 262

Query: 241 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVADMD 300
           SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSN AREISVVSTN SRLSILEE+A QVADMD
Sbjct: 263 SFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNLAREISVVSTNHSRLSILEEKAEQVADMD 322

Query: 301 MDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHELEEI 360
           MDLAGEVERTRVEDIEDNLAYVSELHSDD DDNGVESRTESKILPPSEKELDKIHELEEI
Sbjct: 323 MDLAGEVERTRVEDIEDNLAYVSELHSDD-DDNGVESRTESKILPPSEKELDKIHELEEI 382

Query: 361 PPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDVYSR 420
           PPQGREEVHREAPPI MKT+VSKKKQPKEKGE KSSLVIPGSAKRLRIKEKAVLTDVYSR
Sbjct: 383 PPQGREEVHREAPPIYMKTRVSKKKQPKEKGENKSSLVIPGSAKRLRIKEKAVLTDVYSR 442

Query: 421 YGKKSAVASKEGN 433
           YGKKSA+ASKEGN
Sbjct: 443 YGKKSALASKEGN 451

[Close]

BLAST of Cp4.1LG11g07410 vs. ExPASy TrEMBL
Match: A0A1S3CPG6 (uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=4 SV=1)

HSP 1 Score: 556 bits (1434), Expect = 3.66e-195
Identity = 309/447 (69.13%), Postives = 351/447 (78.52%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           MLDS PLHCRF T  P + HS   NS                 SNSTKFR  H +LSL+ 
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNS-----------------SNSTKFRPPHLNLSLIQ 60

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDG----------DEDLDG----DEMLLP 120
           G  PM FPV A+K+ GKGG++LT  SDSD +FD           DED D     DE+LLP
Sbjct: 61  GSGPMGFPVFAMKRLGKGGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLP 120

Query: 121 LANMREWLAARPRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRN 180
           L N REW AARPRGFGEGK YDTSIE+KLLQE+EQ R+AQAANINKLK+Q  S PNS RN
Sbjct: 121 LKNTREWHAARPRGFGEGKVYDTSIEDKLLQEMEQIREAQAANINKLKNQFSSKPNSSRN 180

Query: 181 VADKEAPEIANTGVRVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICK 240
           V +  APEI +TGVRVR+INLPKK+NI+RDL++AFKGFPGI+NITPAVIGNKKTRDPICK
Sbjct: 181 VVEIAAPEIVSTGVRVRIINLPKKKNINRDLVVAFKGFPGIINITPAVIGNKKTRDPICK 240

Query: 241 GFAFVDCKSEGDAISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRL 300
           GFAFVDCKSEGDA+SFLQ+FSG+YL+FGRVQKQIKCEIMN+QTS+SAR+ SV STN SRL
Sbjct: 241 GFAFVDCKSEGDALSFLQAFSGRYLSFGRVQKQIKCEIMNRQTSSSARKSSVGSTNNSRL 300

Query: 301 SILEEEAGQVADMDMDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPP 360
           SILEEEA Q AD+D+DLA E  RT++E+ ED+LAYV+E HS D DDNGVESRTE KI  P
Sbjct: 301 SILEEEAEQFADIDVDLASEAARTKIEENEDDLAYVNESHSHDVDDNGVESRTEFKIQSP 360

Query: 361 SEKELDKIHELEEIPPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRL 420
           SEKE++KI ELE I  QG+EE+HRE  PI  KTKVSKKKQPKEKGEKK    IPGSAKRL
Sbjct: 361 SEKEVNKIDELEGILLQGKEEIHREVSPIKRKTKVSKKKQPKEKGEKKLLTEIPGSAKRL 420

Query: 421 RIKEKAVLTDVYSRYGKKSAVASKEGN 433
           RIKEKAVLTDVYSRYGKKSA+ S+EG+
Sbjct: 421 RIKEKAVLTDVYSRYGKKSALLSEEGS 430

[Close]

BLAST of Cp4.1LG11g07410 vs. ExPASy TrEMBL
Match: A0A0A0KQN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1)

HSP 1 Score: 551 bits (1420), Expect = 1.48e-192
Identity = 303/439 (69.02%), Postives = 346/439 (78.82%), Query Frame = 0


Query: 1   MLDSPPLHCRFITTWPSVPHSRPNNSLLLPTPYTALYNLQPCNSNSTKFRSLHFSLSLVH 60
           M DS PLHC F T  P + HS   NS                 S STKFR  H +LSL+ 
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNS-----------------SISTKFRPPHLNLSLIQ 100

Query: 61  GPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFD-----GDEDL-DGDEMLLPLANMREWL 120
              PM FPV A+K+ GKGG++LT+ SDSD  FD     G+++  D D++LLPL N +EW 
Sbjct: 101 ASGPMGFPVFAVKRLGKGGIALTEPSDSDIGFDEFFDEGEDNFQDEDDILLPLKNTKEWH 160

Query: 121 AARPRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPE 180
           AARPRGFGEGK YDTSIE+ LLQE+EQ R+AQAANINKLK Q  SNPNS RNV +  APE
Sbjct: 161 AARPRGFGEGKVYDTSIEDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIAAPE 220

Query: 181 IANTGVRVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCK 240
           I +TGV VR+INLP+K+NIHRDL++AFKGFPGI+NITPAVIGNKKTRDP+CKGFAFVDCK
Sbjct: 221 IVSTGVCVRIINLPRKKNIHRDLVVAFKGFPGIINITPAVIGNKKTRDPVCKGFAFVDCK 280

Query: 241 SEGDAISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAG 300
           SEGDA+SFLQ+F+G+YLTFGRVQKQIKCEIMN+QTS+SAR  S+ STN SRLSILEEEA 
Sbjct: 281 SEGDALSFLQAFAGRYLTFGRVQKQIKCEIMNRQTSSSARNSSMSSTNHSRLSILEEEAE 340

Query: 301 QVADMDMDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKI 360
           Q  D+D+DLA E  RT+ EDIED+LAYVSE HS +EDDNGVESRTE  I  PSEKE++KI
Sbjct: 341 QFVDIDVDLASEATRTKTEDIEDDLAYVSESHSHEEDDNGVESRTEFTIQSPSEKEVNKI 400

Query: 361 HELEEIPPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVL 420
            ELEEI PQGREE+HRE  PI  KTKVSKKKQPKEKGEKK    IPGSAKRLRIKEKAVL
Sbjct: 401 -ELEEILPQGREEIHREVSPIKRKTKVSKKKQPKEKGEKKLLTEIPGSAKRLRIKEKAVL 460

Query: 421 TDVYSRYGKKSAVASKEGN 433
           TDVYSRYGKKSA+ S+EGN
Sbjct: 461 TDVYSRYGKKSALVSQEGN 461

[Close]

BLAST of Cp4.1LG11g07410 vs. ExPASy TrEMBL
Match: A0A6J1DEC7 (uncharacterized protein LOC111019305 OS=Momordica charantia OX=3673 GN=LOC111019305 PE=4 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 4.82e-178
Identity = 298/437 (68.19%), Postives = 338/437 (77.35%), Query Frame = 0


Query: 1   MLDSPPLHC--RFITTWPSVPHSRPNNSLLLPTPYTALYNLQ-PCNSNSTKFRSLHFSLS 60
           M+DS  LH   RF   W S  HS+P  SLLLP  YTA Y L  P N NSTKF S HF LS
Sbjct: 2   MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLS 61

Query: 61  LVHGPRPMCFPVSALKKRGKGGVSLTDQSDSDNEFDGDEDLDGDEMLLPLANMREWLAAR 120
           LVH P  + F V A KK G+G    TD   SD EFD   D + +E+LLPL  M+EWLA R
Sbjct: 62  LVHAPPRIGFHVFAQKKPGRGVAQPTD---SDIEFDEFFDEE-EEVLLPLKKMKEWLAGR 121

Query: 121 PRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIAN 180
           PRGFGEGKEYDTSIE+KLLQE+EQSR AQAANINKLK+Q  S  NS ++VA+ +A +I +
Sbjct: 122 PRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGS 181

Query: 181 TGVRVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEG 240
           TG  VR++NLPKK+NIHRDL++AFK FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEG
Sbjct: 182 TGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEG 241

Query: 241 DAISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNSAREISVVSTNRSRLSILEEEAGQVA 300
           DAI FLQ+FSGQYLTFGRVQKQIKCE++N++TS SA E SV ST  +   I E EA Q A
Sbjct: 242 DAIRFLQTFSGQYLTFGRVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA 301

Query: 301 DMDMDLAGEVERTRVEDIEDNLAYVSELHSDDEDDNGVESRTESKILPPSEKELDKIHEL 360
           D+D DL+ EV RTRVED+E+NL  VSELHSDDED+   ESRTESKI  PS KEL++IHE 
Sbjct: 302 DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEP 361

Query: 361 EEIPPQGREEVHREAPPINMKTKVSKKKQPKEKGEKKSSLVIPGSAKRLRIKEKAVLTDV 420
           EEI P GREE+HRE PPI  K KVSKKKQPKEKGEKKS   IPGSAKRLR+KEKAVLTDV
Sbjct: 362 EEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDV 421

Query: 421 YSRYGKKSA-VASKEGN 433
           YSRYG KSA + SKEGN
Sbjct: 422 YSRYGNKSAALVSKEGN 427

[Close]

BLAST of Cp4.1LG11g07410 vs. TAIR 10
Match: AT1G70200.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 195.3 bits (495), Expect = 1.0e-49
Identity = 158/472 (33.47%), Postives = 229/472 (48.52%), Query Frame = 0


Query: 71  ALKKRGKGGVSLTDQSDSDNEFD-----------GDEDLDGDEMLLPLANMREWLAARPR 130
           A+ KR  G   + +  D D E D           G+E+ + +   LP+  M++WL  +PR
Sbjct: 67  AVNKRRSGDSVIVESDDDDEEDDEDWGEFDGEDEGEEEEEDEGEFLPMDKMKKWLEKKPR 126

Query: 131 GFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSGRNVADKEAPEIANTG 190
           GFG GK+Y+T IE+KLL EIEQS KAQAAN+NKLK+ P  +    R+    +       G
Sbjct: 127 GFGLGKKYETLIEDKLLDEIEQSWKAQAANLNKLKNDPLKSQQLKRDDNLLKGTGETQIG 186

Query: 191 VRVRVINLPKKRNIHRDLMLAFKGFPGIVNITPAVIGNKKTRDPICKGFAFVDCKSEGDA 250
            RVRV NLPKK+N+HRDL +AFK   G+++ITPAV GNKKT+DP+CKGFA VD K+E DA
Sbjct: 187 FRVRVTNLPKKKNVHRDLKVAFKEVSGVLSITPAVSGNKKTKDPVCKGFAHVDFKTEIDA 246

Query: 251 ISFLQSFSGQYLTFGRVQKQIKCEIMNQQTSNS-AREISVVS------------TNRSRL 310
             F++ F+GQ L FG+V KQIKC+++   + +S ++E+ + +               S  
Sbjct: 247 NRFVKQFTGQSLAFGKVIKQIKCQVVEFTSDDSVSKEVYLDNGFKVQKLPYSGLEGDSSA 306

Query: 311 SILEEE----AGQVADMDMDLAGEVERTRVEDIEDN--------------------LAY- 370
            ++EEE    +G+ +D   D   EV+   VED E N                    L + 
Sbjct: 307 DVVEEEVLLGSGEESD---DSEEEVDEREVEDDERNHISSSIESSPIEMTRDSNTKLKFE 366

Query: 371 -----------------------------VSELHSDDEDDNGVESRT------------- 430
                                         +E H DDE      + T             
Sbjct: 367 KQVVKREIREHEELETPLVSFQVNKSEEAAAETHLDDEQSEEAVAETLLNDELDGDDEEE 426

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g07410 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG11g07410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547227.1	9.22e-308	100.00	uncharacterized protein LOC111806104 [Cucurbita pepo subsp. pepo] >XP_023547228....	[more]
XP_022946475.1	4.11e-295	96.30	uncharacterized protein LOC111450524 [Cucurbita moschata] >XP_022946476.1 unchar...	[more]
XP_022999318.1	4.57e-285	94.92	uncharacterized protein LOC111493728 [Cucurbita maxima] >XP_022999319.1 uncharac...	[more]
KAG6599035.1	1.71e-283	96.40	hypothetical protein SDJN03_08813, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7029987.1	5.02e-282	96.16	hypothetical protein SDJN02_08331 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cp4.1LG11g07410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3T4	1.99e-295	96.30	uncharacterized protein LOC111450524 OS=Cucurbita moschata OX=3662 GN=LOC1114505...	[more]
A0A6J1KJD4	2.21e-285	94.92	uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728...	[more]
A0A1S3CPG6	3.66e-195	69.13	uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=...	[more]
A0A0A0KQN3	1.48e-192	69.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1	[more]
A0A6J1DEC7	4.82e-178	68.19	uncharacterized protein LOC111019305 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]

BLAST of Cp4.1LG11g07410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70200.1	1.0e-49	33.47	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..346
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..378
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 358..402
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..173
None	No IPR available	PANTHER	PTHR37200	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 37..432
None	No IPR available	CDD	cd00590	RRM_SF	coord: 182..255 e-value: 4.39407E-6 score: 42.2921
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 123..264 e-value: 7.8E-6 score: 27.9
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 153..271

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g07410.1	Cp4.1LG11g07410.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding