Cp4.1LG11g07390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g07390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RNase H domain-containing protein
Location	Cp4.1LG11: 5909146 .. 5914427 (+)
RNA-Seq Expression	Cp4.1LG11g07390
Synteny	Cp4.1LG11g07390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGCGACTGGAGCGAGAAACTTAGTATGGAGAAACCTATTTGGGTGGATGGATGACATTGATTTGATTTGGAAACCCTGAAATCCCCATAGTTCCTGGAAAATTCCCCTCTCATGAACTGCTTCTCCCAATTCTCTACCTACACTCGCGCCATTTTCAGAGCCACCAATCTTGCTTTTGCAGCTTCCACCTCCATTCATGGCTGCCGCTTTAATCCCTACTGGACCTCGAGCTTTCACAGCGTCACTCTTAAACCTACTCCTTTAGACTCCTTGTGTTCCAGATTTCGTCTACGTTGCTACTCCTCTCGAAAACTCCGCAAGGGCGCTTCTCCTTCTCCCAACTTAGATTCTAAACCTCCCATGGAACCAGACATGGGCGACTTCTTTGTCGTTCGGAAGGGGGACGTTGTTGGAGTCTATAAAAGTTTTACTGACTGTCAGGCGCAAATTGGATCTTCGGTATTCATTTCTTTTACTTTTGATTGGTGATTTAACACATTTTGAATTCATGTTCTCTCTGCGAACTTAGATTAGGTTTTCCTACTGGTTACATTTAATTGTTTTTGAAGTATTGGCTCAGTGATCGATCAGTTCATCATACTTCTTATTGCTTAAGGATTTTGTCTTACTTGACAAGCATAGTTCTTTGTTAATTTTACTTATGGTTGCCGGTTTGTTGTAACTGGTGCATTTCGTTCAGTGGATTAAGCTCGGGTGTTATCGTTTCTTTTCTGTGGCAGATATGCGATCTTCCTGTTAGCGTGTATAAGGGACACTCATTGCCGAAAGACACTGGGGAATATCTTGCTTCCGTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCAGTTCGCTCGTTCCTTGCACTTTTCATGTATGATGCTTCATTAGTTGAATGATTATCGAGTTAAAAGTCTAAGAGAACATTACTGGCATGAATTATATAAGAAAAAAGTAGGAAAAATATAGTAATTCTGCTCTTATACTAGACTTATTCAAGCATCACAAAGATTAATATTTCCCAAATGTTAGATCATCCATGTTTGGTCATTATTGAAGAGGGTGAATTTGGCCCTATCATGGGATGCTCTACAGATGTTTGCGAGAAAGGAGCATATTGTTTTAGTCTCCCTAGGTCACAATTTTGAGTTTGTACTCCATGCCTCCCTTGCCTTGTAATTTTCTATTTTGTAGAGAACACGGTTTCATGTTTTATAGGAAGAATAGTATAACTAGCACAGTTTGCACTTTAAAGTCAGACGATGAAGGCTGTAAACTACAACAACATGAAGCATTTTATACATATTGGTTTTTTACAATAGCAAATTAGGATGGTAGGTTTTCAATTTTGTTTTTATGTAGATTCAATCTCCTTCCTGGACTATCTTTATGCACTCTAGCATAAGTTTGTTATATTTATAAAAGGTTTCTGTTTTCCAGGATGAAGCTACTTCTCTTAAAGGTGAGGCTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGACCATTGTATCAGAAAATATTGTAAGTTGATTTTCATGTCATCTTCTAAGCTAAAATTTTAATTGAAGCGATAAAGCTCTTTACAAAGGAACTTGCAACACTGAATTTGATATGCAACTTATGGTTTTTGTTGTCAATGCTCGTTTACTTGGGGTTAATGCAGATTTAAATGTTTGCAGGGGTCAACTGTTTTAACTCCTACTTCAAAAGATCCCTTGAGGAAACATGTCAAGTTGGAAGATTCCGTTGTGTCCCAAGCACCCTCTAACCATGTAAGTCAAAGTCTCGGTGATGTCATAGTGATTGGACCAATACTATGAACTGCATACTCTTGTCTGTAGCTAAATATTTGTGTACATGTGATTCTGTATTTTTTGCCTAGTGTTGCTTAAGTGGTTGATTAAAAAAAGAAATAAATTACTGCATTTGTTTGTTGTCCTCTGAGTTGTATCAATTTTTATTTTAGGCTATTAATTAGGACGTAAAGTTCTGTTTCTAAACTAATTATGTATTTGATTGTGTCCTTGTGTTGTTAACATCATTCAAAAGGTGCCAGCTCGTTAAACCTTCAGAATTTTCACATCTGTCAACTGATATCAAGTCATCAATTTCGTTATGATCATAATAAGGTTGGTACAGGGTAGTTCTTATGCAAAGATATAATTAGGGTCTGAAATATTACTTTTAATTTAAAAGGGCCAAAATGAAACCAGCAAATGGTTATGGTTTCCTGATGGTAATCGTATTTTATAATGAACTAGCGAGGATGCAAACTAGTGGAGTCTCTTTTTAGTTTTGTTTTGACGCTGATATGCTTTCATTTCATTGTCCAGATTCCAAAATGATATTTCCATAATACAATGGAATAGTCCCTTAGTTTATTTTTCAACTTACTCGACAGATTTTATAGCCATTATAATATTTCATGTACAGGAATCTTGCTTTCTAGAATTCGATGGTGCCTCAAAGGGAAACCCTGGGCAAGCTGGTGCAGGAGCTGTTCTACGAGCTCATGATGGGAGTGTGGTATACATTCTTCCGTTTAGATCCCACATTACTTATGTATTCTTATTTATATATACCTAATCTATCTCTCCCCCCCTTGGAATAGATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCAATTCTTTTAGGGTTGAAGTATGCACTTGAGAAAGGGTTTACTAGGATCCATGTCCAAGGCGACTCCAAACTTGTCTGTATGCAGGTTGGTTAAAATATTTTCCCCTTACAAGTATTGTTGGGTTTTTGTATTTATGTTTATGTTTATGTTTTTTTTAATTTATTTGTCAACTTAATTCTTGTTGTGGCCTCACATTGTAAGCTTGTTAAGTAGGTCTCATTTTGTCTTTTATATTTAGGAAAAATTCGGAGGTATGGTTTTAATGGTTGTCTTAGGACTAAGAAGTTCAAAGCTGAAAACTTTGTATTTAAAGATAATCCTTGTAAATTATTATTACACTGTAAGAAACATTTGTACTGAAGGGAAATAATTAGTCCAAACTGCATGAAACTAATGTTGTCATACCCGATTCCGGGAACATCCCAATAGTTTTCCTGACCCATGGTTTGCAGTCTCTGTGAAAATACTATTTCATCGAGAGTTGTACTTCTATTTTCTTCAAAGGGAAGGAGGCTAACGTCCTTTTGTCGATATGCCTGCTCTGTGAAGATTCCCTTGACACTACTTTCACCCTAACCCAAGGGGGCAGGAACGTTAGAAGAAAACACACCAGTTGACAAATTGAAAAAGTTGTAGAACATTTGTTTAAGGCATTCTGATTCCTGAAACTTTTTCTTGCTATCGATTGCCCCTTTTATCAACACATGGGATGAAGTTTTAATGCAGTGGAACAATTTTCTGGTTAACAACATTGACGAAAAACCTTTCCTCTATTGAGATGTTAACAAACCTTACCTTCAAGTTGAAAAGTATATCATCATCAATGTAGCTCACTTCCATATGAGTTCTTTTGAATATCTAGCATTGGTTTTTGTGGCTCAGCATTGTGGAGGTTCATTAATAGAAAGTTGTAGGAAAGATCCAGAATTTGAACCAAACACAGTTCTTATATGGAGTTAGAAATTTACTAATTACTATGCATAGCAATTAAAGAATTAAAATGTATCTGGCCACGTCTTTTGGTTAGTTGCATTTTCAAGTTCGCATCCCCAGTTTCTCTCGCTAGTAGTATGGTTTTGCTGAAATACAGTGTTTATGTAAATATTTAATATTAGGGACATTTAAAGCTGCAACTGTTTTGTTATTGTCAACCTCCGTATATCAAAACCAACCTTATCTCTTAGTCCTACCTCTCTGTCTGGATCCATCTGTTTTTTGGTAAAAAATAAAATTCATGGCATCTTCGTTTGTTCCCCTTTTTCTTATGTATTCTAAATCAATCATACTTCATTGAACAGGTTCAAGGATTATGGAAGGTAAAAAATGAGAATATCGCTGAGTTATGTAATGAAGTTATGAAGCTGAAGGATAAATTTCTCTCCTTCGAGATCAGTCATGTACTAAGGGTCAGTACCATTAATTCCTTTCTATTTGCATCTCACGATGTTGTGTAGTTGGTTTCTGCATATTATTGTTTCTTATGCTCTACGCACTTTACTATTTAAGATCTGAAGGTGGTGAAAAAAAAAAATATCCTTAAGGGTCAGTACCCTACAAACATAGGCTTAAACTGTAGCCTTATTTTAGTTCAGTTTTTCGATAGAACAGTGAACGTAAGTCAAGTTTGAGTTTGGACGTTGCTTTCTCCACATTATTTGTCCGACAACCGAACGAGACTTGCATACTCGAAAAAATAATAAATACGTACTCATAAAACAGTCTGGTACTTATTCCTTATCAAGGTAATGTCCTTAATGGAATGGATACCAATTCTAGCGACCATTGAATCCATTTTCTTATTTGTTGATATCTGTACTTGTTCATTCTTTGAAATTCTGACATTCTGTCGTTCATTCTGGAAAGAATCTAAACTCTGAAGCCGATGCTGAAGCAAACTTGGCTGTCACTCTACCTGGTAATGCTTATTTGAAATAATTCTAATAACTACTTTGAGTTTTCCTTAAAGTTTAAGAGTAACCAAGGTGGTCCTTCCTATTGCAGACGGCGAAGCCCAAGAGTTTGAAGAATAATAGTTAGAATGCACGGCAGGATACATCTTACAGCATAGAATTATTTTCTGAGGAATGCATTTATAGTCCAATGCTTTGTATGCTACTATTCTTTCCCCAAGGTTGACACGAGCTTTGGGCGTTGTTTCGGTTGCTCGCTTATGCTCCATGACCCTGACATAGGGAACTGAAGTTCTAGTGGCAATGGACTGGACAGTGCACAAGTGCATTTGTCCTGCATATATGAGATAAGAGTCCTAATTCAATTTATAACTGGAATGTTGCATTTATTTTCTTATTCATGTTACCAGTTGATTAGGCAATGATGCAGGCTATAATCGAGAATTAAAGAACACAGAATTTTTGGATTGTTCAATGAAGATCTTTGAGAAAGACGTTTTTTTTTTTCTGCTTCAGCCATCGAGGATTGTCAAACTTTGTAGCTTTTTCTCTAGTTTAAGTCTTGATTAGATCTTCTATTCCTTCAGTTGGCTACTGGCGTTTATAGTCTTCTTCTTTTCTAATTTCAGGATTGGTTAGATCAAATAAGACTTGGGACAATCTCAAA

mRNA sequence

TGGAGCGACTGGAGCGAGAAACTTAGTATGGAGAAACCTATTTGGGTGGATGGATGACATTGATTTGATTTGGAAACCCTGAAATCCCCATAGTTCCTGGAAAATTCCCCTCTCATGAACTGCTTCTCCCAATTCTCTACCTACACTCGCGCCATTTTCAGAGCCACCAATCTTGCTTTTGCAGCTTCCACCTCCATTCATGGCTGCCGCTTTAATCCCTACTGGACCTCGAGCTTTCACAGCGTCACTCTTAAACCTACTCCTTTAGACTCCTTGTGTTCCAGATTTCGTCTACGTTGCTACTCCTCTCGAAAACTCCGCAAGGGCGCTTCTCCTTCTCCCAACTTAGATTCTAAACCTCCCATGGAACCAGACATGGGCGACTTCTTTGTCGTTCGGAAGGGGGACGTTGTTGGAGTCTATAAAAGTTTTACTGACTGTCAGGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGCGTGTATAAGGGACACTCATTGCCGAAAGACACTGGGGAATATCTTGCTTCCGTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCAGTTCGCTCGTTCCTTGCACTTTTCATGATGAAGCTACTTCTCTTAAAGGTGAGGCTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGACCATTGTATCAGAAAATATTGGGTCAACTGTTTTAACTCCTACTTCAAAAGATCCCTTGAGGAAACATGTCAAGTTGGAAGATTCCGTTGTGTCCCAAGCACCCTCTAACCATGAATCTTGCTTTCTAGAATTCGATGGTGCCTCAAAGGGAAACCCTGGGCAAGCTGGTGCAGGAGCTGTTCTACGAGCTCATGATGGGAGTGTGATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCAATTCTTTTAGGGTTGAAGTATGCACTTGAGAAAGGGTTTACTAGGATCCATGTCCAAGGCGACTCCAAACTTGTCTGTATGCAGGTTCAAGGATTATGGAAGGTAAAAAATGAGAATATCGCTGAGTTATGTAATGAAGTTATGAAGCTGAAGGATAAATTTCTCTCCTTCGAGATCAGTCATGTACTAAGGAATCTAAACTCTGAAGCCGATGCTGAAGCAAACTTGGCTGTCACTCTACCTGACGGCGAAGCCCAAGAGTTTGAAGAATAATAGTTAGAATGCACGGCAGGATACATCTTACAGCATAGAATTATTTTCTGAGGAATGCATTTATAGTCCAATGCTTTGTATGCTACTATTCTTTCCCCAAGGTTGACACGAGCTTTGGGCGTTGTTTCGGTTGCTCGCTTATGCTCCATGACCCTGACATAGGGAACTGAAGTTCTAGTGGCAATGGACTGGACAGTGCACAAGTGCATTTGTCCTGCATATATGAGATAAGAGTCCTAATTCAATTTATAACTGGAATGTTGCATTTATTTTCTTATTCATGTTACCAGTTGATTAGGCAATGATGCAGGCTATAATCGAGAATTAAAGAACACAGAATTTTTGGATTGTTCAATGAAGATCTTTGAGAAAGACGTTTTTTTTTTTCTGCTTCAGCCATCGAGGATTGTCAAACTTTGTAGCTTTTTCTCTAGTTTAAGTCTTGATTAGATCTTCTATTCCTTCAGTTGGCTACTGGCGTTTATAGTCTTCTTCTTTTCTAATTTCAGGATTGGTTAGATCAAATAAGACTTGGGACAATCTCAAA

Coding sequence (CDS)

ATGAACTGCTTCTCCCAATTCTCTACCTACACTCGCGCCATTTTCAGAGCCACCAATCTTGCTTTTGCAGCTTCCACCTCCATTCATGGCTGCCGCTTTAATCCCTACTGGACCTCGAGCTTTCACAGCGTCACTCTTAAACCTACTCCTTTAGACTCCTTGTGTTCCAGATTTCGTCTACGTTGCTACTCCTCTCGAAAACTCCGCAAGGGCGCTTCTCCTTCTCCCAACTTAGATTCTAAACCTCCCATGGAACCAGACATGGGCGACTTCTTTGTCGTTCGGAAGGGGGACGTTGTTGGAGTCTATAAAAGTTTTACTGACTGTCAGGCGCAAATTGGATCTTCGATATGCGATCTTCCTGTTAGCGTGTATAAGGGACACTCATTGCCGAAAGACACTGGGGAATATCTTGCTTCCGTCGGGCTTAAGAATGCTCTGTACACTATTAAAGCTGCAGATATGAGACCTGATCTTTTCAGTTCGCTCGTTCCTTGCACTTTTCATGATGAAGCTACTTCTCTTAAAGGTGAGGCTTCTGGCCAGGATGCCATAAAGAAGAGATCAAGAGAGACCATTGTATCAGAAAATATTGGGTCAACTGTTTTAACTCCTACTTCAAAAGATCCCTTGAGGAAACATGTCAAGTTGGAAGATTCCGTTGTGTCCCAAGCACCCTCTAACCATGAATCTTGCTTTCTAGAATTCGATGGTGCCTCAAAGGGAAACCCTGGGCAAGCTGGTGCAGGAGCTGTTCTACGAGCTCATGATGGGAGTGTGATATGTAGACTGCGTGAAGGCCTAGGTATAGCAACCAATAATGTTGCTGAATATCGAGCAATTCTTTTAGGGTTGAAGTATGCACTTGAGAAAGGGTTTACTAGGATCCATGTCCAAGGCGACTCCAAACTTGTCTGTATGCAGGTTCAAGGATTATGGAAGGTAAAAAATGAGAATATCGCTGAGTTATGTAATGAAGTTATGAAGCTGAAGGATAAATTTCTCTCCTTCGAGATCAGTCATGTACTAAGGAATCTAAACTCTGAAGCCGATGCTGAAGCAAACTTGGCTGTCACTCTACCTGACGGCGAAGCCCAAGAGTTTGAAGAATAA

Protein sequence

MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRLRCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTLPDGEAQEFEE

Homology

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy Swiss-Prot
Match: P9WLH5 (Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2228c PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.6e-17
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 234 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKYALEKG 293
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A++ G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 294 FTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA 353
            T   V  DSKLV  Q+ G WKVK+ ++ +L  +   L  +F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 354 EANLAV 359
            AN A+
Sbjct: 125 LANDAM 130

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy Swiss-Prot
Match: P9WLH4 (Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2287 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.6e-17
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 234 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKYALEKG 293
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A++ G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 294 FTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA 353
            T   V  DSKLV  Q+ G WKVK+ ++ +L  +   L  +F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 354 EANLAV 359
            AN A+
Sbjct: 125 LANDAM 130

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy Swiss-Prot
Match: P64956 (Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2253C PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 5.6e-17
Identity = 54/126 (42.86%), Postives = 74/126 (58.73%), Query Frame = 0


Query: 234 LEFDGASKGNPGQAGAGAVLRAHDGS-VICRLREGLGIATNNVAEYRAILLGLKYALEKG 293
           +E DG S+GNPG AG GAV+   D S V+   ++ +G ATNNVAEYR ++ GL  A++ G
Sbjct: 5   IEADGGSRGNPGPAGYGAVVWTADHSTVLAESKQAIGRATNNVAEYRGLIAGLDDAVKLG 64

Query: 294 FTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA 353
            T   V  DSKLV  Q+ G WKVK+ ++ +L  +   L  +F       V R  N+ AD 
Sbjct: 65  ATEAAVLMDSKLVVEQMSGRWKVKHPDLLKLYVQAQALASQFRRINYEWVPRARNTYADR 124

Query: 354 EANLAV 359
            AN A+
Sbjct: 125 LANDAM 130

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy Swiss-Prot
Match: Q9HSF6 (Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) OX=64091 GN=rnhA PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-16
Identity = 50/123 (40.65%), Postives = 71/123 (57.72%), Query Frame = 0


Query: 236 FDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTR 295
           FDGAS+GNPG A  G VL + DG ++    + +G ATNN AEY A++  L+ A + GF  
Sbjct: 74  FDGASRGNPGPAAVGWVLVSGDGGIVAEGGDTIGRATNNQAEYDALIAALEAAADFGFDD 133

Query: 296 IHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEAN 355
           I ++GDS+LV  Q+ G W   + ++        +L   F  + I+HV R  N  ADA AN
Sbjct: 134 IELRGDSQLVEKQLTGAWDTNDPDLRRKRVRARELLTGFDDWSITHVPRATNERADALAN 193

Query: 356 LAV 359
            A+
Sbjct: 194 EAL 196

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy Swiss-Prot
Match: P54162 (14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308 GN=rnhA PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.4e-07
Identity = 40/124 (32.26%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 237 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRI 296
           DGAS GNPG +G G  ++ H+G         +G+ TN  AE+ A++ G+K    +G+  +
Sbjct: 8   DGASAGNPGPSGIGIFIK-HEGKAE-SFSIPIGVHTNQEAEFLALIEGMKLCATRGYQSV 67

Query: 297 HVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANL 356
             + DS +V  +   L  VKN        E+++LK  F  F I  +    N +AD  A  
Sbjct: 68  SFRTDSDIV-ERATELEMVKNITFQPFVEEIIRLKAAFPLFFIKWIPGKQNQKADLLAKE 127

Query: 357 AVTL 361
           A+ L
Sbjct: 128 AIRL 128

[Close]

BLAST of Cp4.1LG11g07390 vs. NCBI nr
Match: XP_023547239.1 (uncharacterized protein LOC111806115 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 743 bits (1918), Expect = 1.41e-270
Identity = 370/370 (100.00%), Postives = 370/370 (100.00%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300
           KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300

Query: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360
           DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL
Sbjct: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360

Query: 361 PDGEAQEFEE 370
           PDGEAQEFEE
Sbjct: 361 PDGEAQEFEE 370

[Close]

BLAST of Cp4.1LG11g07390 vs. NCBI nr
Match: XP_022946833.1 (uncharacterized protein LOC111450776 [Cucurbita moschata] >KAG6599028.1 hypothetical protein SDJN03_08806, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 731 bits (1887), Expect = 7.50e-266
Identity = 364/370 (98.38%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFR TNLAFAASTSIHGCRFN YWTSSFHSVTLKPTPLDSLCSRF L
Sbjct: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSIHGCRFNLYWTSSFHSVTLKPTPLDSLCSRFCL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYL+SVGLKNALYTIKAADMRPDLFSSLVPCTFHDEAT+LKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATTLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300
           KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300

Query: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360
           DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA+ANLAVTL
Sbjct: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAVTL 360

Query: 361 PDGEAQEFEE 370
           PDGEAQEFEE
Sbjct: 361 PDGEAQEFEE 370

[Close]

BLAST of Cp4.1LG11g07390 vs. NCBI nr
Match: KAG6599033.1 (hypothetical protein SDJN03_08811, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 730 bits (1885), Expect = 1.51e-265
Identity = 364/370 (98.38%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFR TNLAFAASTSI+GCRFN YWTSSFHSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRFNLYWTSSFHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYL+SVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESC LEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300
           KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300

Query: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360
           DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA+ANLAVTL
Sbjct: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAVTL 360

Query: 361 PDGEAQEFEE 370
           PDGEAQEFEE
Sbjct: 361 PDGEAQEFEE 370

[Close]

BLAST of Cp4.1LG11g07390 vs. NCBI nr
Match: KAG7029985.1 (hypothetical protein SDJN02_08329 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 719 bits (1855), Expect = 8.89e-261
Identity = 363/382 (95.03%), Postives = 366/382 (95.81%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFR TNLAFAASTSI+GCR N YWTSSFHSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSINGCRVNLYWTSSFHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYL+SVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESC LEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCILEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSV------------ICRLREGLGIATNNVAEYRAILLGLKYA 300
           KGNPGQAGAGAVLRAHDGSV            ICRLREGLGIATNNVAEYRAILLGLKYA
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVVYILPFRSHITFICRLREGLGIATNNVAEYRAILLGLKYA 300

Query: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360
           LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS
Sbjct: 301 LEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNS 360

Query: 361 EADAEANLAVTLPDGEAQEFEE 370
           EADA+ANLAVTLPDGEAQEFEE
Sbjct: 361 EADAQANLAVTLPDGEAQEFEE 382

[Close]

BLAST of Cp4.1LG11g07390 vs. NCBI nr
Match: XP_022999715.1 (uncharacterized protein LOC111493983 [Cucurbita maxima])

HSP 1 Score: 717 bits (1850), Expect = 3.27e-260
Identity = 355/370 (95.95%), Postives = 364/370 (98.38%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQFSTY RAIFR TNLAFAASTSIHGC FNPYWTSS HSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCCSQFSTYARAIFRTTNLAFAASTSIHGCGFNPYWTSSLHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDS+PPMEPDMGDFFVVRKGDVVGVY+SFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSEPPMEPDMGDFFVVRKGDVVGVYRSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDT EYLASVGLKNALYTI+AADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTKEYLASVGLKNALYTIQAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVS+NIGSTVLTPTSKDPLRKHVKLEDSVVS+APSNHESCFLEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSKNIGSTVLTPTSKDPLRKHVKLEDSVVSRAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300
           KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300

Query: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360
           DSKLVCMQVQGLWKVKNENI+ELCNEVMKLKDKFLSFEISHVLRNLNSEADA+ANLA++L
Sbjct: 301 DSKLVCMQVQGLWKVKNENISELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAISL 360

Query: 361 PDGEAQEFEE 370
           PDGEAQEFEE
Sbjct: 361 PDGEAQEFEE 370

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy TrEMBL
Match: A0A6J1G4Y7 (uncharacterized protein LOC111450776 OS=Cucurbita moschata OX=3662 GN=LOC111450776 PE=4 SV=1)

HSP 1 Score: 731 bits (1887), Expect = 3.63e-266
Identity = 364/370 (98.38%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQFSTYTRAIFR TNLAFAASTSIHGCRFN YWTSSFHSVTLKPTPLDSLCSRF L
Sbjct: 1   MNCFSQFSTYTRAIFRTTNLAFAASTSIHGCRFNLYWTSSFHSVTLKPTPLDSLCSRFCL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDTGEYL+SVGLKNALYTIKAADMRPDLFSSLVPCTFHDEAT+LKGEAS
Sbjct: 121 PVSVYKGHSLPKDTGEYLSSVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATTLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300
           KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300

Query: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360
           DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA+ANLAVTL
Sbjct: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAVTL 360

Query: 361 PDGEAQEFEE 370
           PDGEAQEFEE
Sbjct: 361 PDGEAQEFEE 370

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy TrEMBL
Match: A0A6J1KGD7 (uncharacterized protein LOC111493983 OS=Cucurbita maxima OX=3661 GN=LOC111493983 PE=4 SV=1)

HSP 1 Score: 717 bits (1850), Expect = 1.58e-260
Identity = 355/370 (95.95%), Postives = 364/370 (98.38%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQFSTY RAIFR TNLAFAASTSIHGC FNPYWTSS HSVTLKPTPLDSLCSRFRL
Sbjct: 1   MNCCSQFSTYARAIFRTTNLAFAASTSIHGCGFNPYWTSSLHSVTLKPTPLDSLCSRFRL 60

Query: 61  RCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDL 120
           RCYSSRKLRKGASPSPNLDS+PPMEPDMGDFFVVRKGDVVGVY+SFTDCQAQIGSSICDL
Sbjct: 61  RCYSSRKLRKGASPSPNLDSEPPMEPDMGDFFVVRKGDVVGVYRSFTDCQAQIGSSICDL 120

Query: 121 PVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEAS 180
           PVSVYKGHSLPKDT EYLASVGLKNALYTI+AADMRPDLFSSLVPCTFHDEATSLKGEAS
Sbjct: 121 PVSVYKGHSLPKDTKEYLASVGLKNALYTIQAADMRPDLFSSLVPCTFHDEATSLKGEAS 180

Query: 181 GQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGAS 240
           GQDAIKKRSRETIVS+NIGSTVLTPTSKDPLRKHVKLEDSVVS+APSNHESCFLEFDGAS
Sbjct: 181 GQDAIKKRSRETIVSKNIGSTVLTPTSKDPLRKHVKLEDSVVSRAPSNHESCFLEFDGAS 240

Query: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300
           KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG
Sbjct: 241 KGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQG 300

Query: 301 DSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTL 360
           DSKLVCMQVQGLWKVKNENI+ELCNEVMKLKDKFLSFEISHVLRNLNSEADA+ANLA++L
Sbjct: 301 DSKLVCMQVQGLWKVKNENISELCNEVMKLKDKFLSFEISHVLRNLNSEADAQANLAISL 360

Query: 361 PDGEAQEFEE 370
           PDGEAQEFEE
Sbjct: 361 PDGEAQEFEE 370

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy TrEMBL
Match: A0A0A0KTZ9 (RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G489310 PE=4 SV=1)

HSP 1 Score: 614 bits (1583), Expect = 8.50e-220
Identity = 310/374 (82.89%), Postives = 334/374 (89.30%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNCFSQ STYTR IFR TNL FAASTSIHGC  N YWTSSFH+V +K T LDSLCSRF L
Sbjct: 1   MNCFSQVSTYTRVIFRRTNLVFAASTSIHGCS-NAYWTSSFHNVAVKTTALDSLCSRFGL 60

Query: 61  RCYSSRKLRKG---ASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK RK     SPSP LDS+PP+E +MGDFFVVRKGDVVGVYKSF+DCQAQIGSSI
Sbjct: 61  RCYSTRKPRKPRKPTSPSPKLDSEPPVESEMGDFFVVRKGDVVGVYKSFSDCQAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKDT EYLASVGLKNALYTIKAADMRPDLF SL PCTFH   TSL G
Sbjct: 121 CDLPVSVFKGHSLPKDTEEYLASVGLKNALYTIKAADMRPDLFGSLAPCTFHGGDTSLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQA-PSNHESCFLEF 240
           E SGQDAIKKRSRE IV EN+GSTVLTPT KDP RKH+KLEDS+VS +  SN ESCFLEF
Sbjct: 181 ETSGQDAIKKRSREAIVPENVGSTVLTPTLKDPTRKHIKLEDSIVSHSVSSNRESCFLEF 240

Query: 241 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRI 300
           DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK AL+KGFTRI
Sbjct: 241 DGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKSALKKGFTRI 300

Query: 301 HVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANL 360
           HVQGDSKLVCMQVQGLWK K+EN++ELCNEV KLK+KFLSFE++HVLR+LNSEADA+ANL
Sbjct: 301 HVQGDSKLVCMQVQGLWKAKHENMSELCNEVTKLKNKFLSFEVNHVLRHLNSEADAQANL 360

Query: 361 AVTLPDGEAQEFEE 370
           A+TL +GE QEFE+
Sbjct: 361 ALTLAEGEVQEFED 373

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy TrEMBL
Match: A0A5A7TCE2 (RNase H family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00790 PE=4 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 1.35e-219
Identity = 310/378 (82.01%), Postives = 338/378 (89.42%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSIHGC  NPYW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRKLRKG---ASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK RK     SPSP LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYLAS+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS     +DP RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLS-SNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK+AL+KG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWK KNENI+ELCNEV+KLK+KFLSFE++HVLR+LNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 EANLAVTLPDGEAQEFEE 370
           +ANLA+TL DGE QE E+
Sbjct: 361 QANLALTLADGEIQESED 376

[Close]

BLAST of Cp4.1LG11g07390 vs. ExPASy TrEMBL
Match: A0A1S3CPT7 (uncharacterized protein LOC103503315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503315 PE=4 SV=1)

HSP 1 Score: 613 bits (1582), Expect = 1.35e-219
Identity = 310/378 (82.01%), Postives = 338/378 (89.42%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC SQ STYTR IFR TNL FAASTSIHGC  NPYW+S+FH+V +K T LDSLCSRF L
Sbjct: 1   MNCLSQVSTYTRVIFRRTNLVFAASTSIHGCS-NPYWSSTFHNVAVKATALDSLCSRFGL 60

Query: 61  RCYSSRKLRKG---ASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSI 120
           RCYS+RK RK     SPSP LDS+PPME +MGDFFVVRKGDVVGVYKSF+DC AQIGSSI
Sbjct: 61  RCYSTRKPRKPRKPTSPSPKLDSEPPMESEMGDFFVVRKGDVVGVYKSFSDCHAQIGSSI 120

Query: 121 CDLPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKG 180
           CDLPVSV+KGHSLPKD+ EYLAS+GLKNALYTIKAADMRPDLF SLVPCTFHD   SL G
Sbjct: 121 CDLPVSVFKGHSLPKDSEEYLASIGLKNALYTIKAADMRPDLFGSLVPCTFHDGDASLTG 180

Query: 181 EASGQDAIKKRSRETIVSENIGSTVLTPTS-----KDPLRKHVKLEDSVVSQAPSNHESC 240
           E SGQDAIKKRSRE IVSEN+GS+VLTPTS     +DP RKH+KLEDS+VS + SNHESC
Sbjct: 181 ETSGQDAIKKRSREAIVSENVGSSVLTPTSVTPTSEDPTRKHIKLEDSIVSLS-SNHESC 240

Query: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKG 300
           FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLK+AL+KG
Sbjct: 241 FLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKFALKKG 300

Query: 301 FTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADA 360
           FTRIHVQGDSKLVCMQVQGLWK KNENI+ELCNEV+KLK+KFLSFE++HVLR+LNSEADA
Sbjct: 301 FTRIHVQGDSKLVCMQVQGLWKAKNENISELCNEVVKLKNKFLSFEVNHVLRHLNSEADA 360

Query: 361 EANLAVTLPDGEAQEFEE 370
           +ANLA+TL DGE QE E+
Sbjct: 361 QANLALTLADGEIQESED 376

[Close]

BLAST of Cp4.1LG11g07390 vs. TAIR 10
Match: AT1G24090.1 (RNase H family protein )

HSP 1 Score: 318.9 bits (816), Expect = 5.3e-87
Identity = 180/367 (49.05%), Postives = 242/367 (65.94%), Query Frame = 0


Query: 1   MNCFSQFSTYTRAIFRATNLAFAASTSIHGCRFNPYWTSSFHSVTLKPTPLDSLCSRFRL 60
           MNC S   +Y  A+      ++ +S   + C F  Y  S      LKP  + S+     +
Sbjct: 1   MNCLSHARSYI-ALGLLKRSSYVSSIPWNECFF--YMPS---KSCLKPVAVSSVFGICSV 60

Query: 61  RCYSSR-KLRKGASPSPNLDSKPPMEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICD 120
             YSSR K  K    S  + S    E D   FFVVRKGDV+G+YK  +DCQAQ+GSS+ D
Sbjct: 61  HSYSSRSKAVKSKMLSSTVVSAVDKEKDA--FFVVRKGDVIGIYKDLSDCQAQVGSSVFD 120

Query: 121 LPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEA 180
           LPVSVYKG+SLPKDT EYL+SVGLK  LY+++A+D++ D+F +L PC F + A      +
Sbjct: 121 LPVSVYKGYSLPKDTEEYLSSVGLKKPLYSLRASDLKDDMFGALTPCLFQEPAPCTVKVS 180

Query: 181 SGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVKLEDSVVSQAPSNHESCFLEFDGA 240
             +   + +S++    +   +++    S DPL K  K+E S    A  + E+CF+EFDGA
Sbjct: 181 EDETTSETKSKDDKKDQLPSASI----SYDPLEKLSKVEPS----AYISDETCFIEFDGA 240

Query: 241 SKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQ 300
           SKGNPG +GA AVL+  DGS+ICR+R+GLGIATNN AEY A++LGLKYA+EKG+  I V+
Sbjct: 241 SKGNPGLSGAAAVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVK 300

Query: 301 GDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVT 360
           GDSKLVCMQ++G WKV +E +A+L  E   L +K +SFEISHVLRNLN++AD +ANLAV 
Sbjct: 301 GDSKLVCMQIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVR 351

Query: 361 LPDGEAQ 367
           LP+GE +
Sbjct: 361 LPEGEVE 351

[Close]

BLAST of Cp4.1LG11g07390 vs. TAIR 10
Match: AT5G51080.1 (RNase H family protein )

HSP 1 Score: 285.0 bits (728), Expect = 8.4e-77
Identity = 152/330 (46.06%), Postives = 210/330 (63.64%), Query Frame = 0


Query: 37  WTSSFHSVTLKPTPLDSLCSRFRLRCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRK 96
           W   F++ +LK +   +  S   + CYSSR     +  S +  S    + +   FFVVRK
Sbjct: 28  WNQCFYT-SLKSSLKPASVSVSSVHCYSSRSKTAKSKMSKSSVSVSDSDKEKDAFFVVRK 87

Query: 97  GDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMR 156
           GD+VG+YK   DCQAQ+GSS+ D PVSVYKG+SL KDT E L++VGLK  LY  +A D++
Sbjct: 88  GDIVGIYKDLIDCQAQVGSSVYDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLK 147

Query: 157 PDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVK 216
            D+F +L PC F D+                                 P++   + K  +
Sbjct: 148 EDMFGALTPCLFQDQ--------------------------------LPSASMSVEKLAE 207

Query: 217 LEDSVVSQAPSNHESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVA 276
           LE S    A +++E+C +EFDGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN A
Sbjct: 208 LEPS----ADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAA 267

Query: 277 EYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLS 336
           EY  ++LGLK+A+EKG+T+I V+ DSKLVCMQ++G WKV +E +++L  E  +L DK LS
Sbjct: 268 EYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLS 320

Query: 337 FEISHVLRNLNSEADAEANLAVTLPDGEAQ 367
           FEISHVLR+LNS+AD +AN+A  L +GE +
Sbjct: 328 FEISHVLRSLNSDADEQANMAARLSEGEVE 320

[Close]

BLAST of Cp4.1LG11g07390 vs. TAIR 10
Match: AT5G51080.2 (RNase H family protein )

HSP 1 Score: 285.0 bits (728), Expect = 8.4e-77
Identity = 152/330 (46.06%), Postives = 210/330 (63.64%), Query Frame = 0


Query: 37  WTSSFHSVTLKPTPLDSLCSRFRLRCYSSRKLRKGASPSPNLDSKPPMEPDMGDFFVVRK 96
           W   F++ +LK +   +  S   + CYSSR     +  S +  S    + +   FFVVRK
Sbjct: 28  WNQCFYT-SLKSSLKPASVSVSSVHCYSSRSKTAKSKMSKSSVSVSDSDKEKDAFFVVRK 87

Query: 97  GDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLASVGLKNALYTIKAADMR 156
           GD+VG+YK   DCQAQ+GSS+ D PVSVYKG+SL KDT E L++VGLK  LY  +A D++
Sbjct: 88  GDIVGIYKDLIDCQAQVGSSVYDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVFRALDLK 147

Query: 157 PDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVLTPTSKDPLRKHVK 216
            D+F +L PC F D+                                 P++   + K  +
Sbjct: 148 EDMFGALTPCLFQDQ--------------------------------LPSASMSVEKLAE 207

Query: 217 LEDSVVSQAPSNHESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGIATNNVA 276
           LE S    A +++E+C +EFDGASKGNPG +GA AVL+  DGS+I ++R+GLGIATNN A
Sbjct: 208 LEPS----ADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAA 267

Query: 277 EYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKLKDKFLS 336
           EY  ++LGLK+A+EKG+T+I V+ DSKLVCMQ++G WKV +E +++L  E  +L DK LS
Sbjct: 268 EYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLS 320

Query: 337 FEISHVLRNLNSEADAEANLAVTLPDGEAQ 367
           FEISHVLR+LNS+AD +AN+A  L +GE +
Sbjct: 328 FEISHVLRSLNSDADEQANMAARLSEGEVE 320

[Close]

BLAST of Cp4.1LG11g07390 vs. TAIR 10
Match: AT5G51080.3 (RNase H family protein )

HSP 1 Score: 275.8 bits (704), Expect = 5.1e-74
Identity = 140/276 (50.72%), Postives = 188/276 (68.12%), Query Frame = 0


Query: 91  FFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLASVGLKNALYTI 150
           FFVVRKGD+VG+YK   DCQAQ+GSS+ D PVSVYKG+SL KDT E L++VGLK  LY  
Sbjct: 18  FFVVRKGDIVGIYKDLIDCQAQVGSSVYDPPVSVYKGYSLLKDTEECLSTVGLKKPLYVF 77

Query: 151 KAADMRPDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVLTPTSKDP 210
           +A D++ D+F +L PC F D+                                 P++   
Sbjct: 78  RALDLKEDMFGALTPCLFQDQ--------------------------------LPSASMS 137

Query: 211 LRKHVKLEDSVVSQAPSNHESCFLEFDGASKGNPGQAGAGAVLRAHDGSVICRLREGLGI 270
           + K  +LE S    A +++E+C +EFDGASKGNPG +GA AVL+  DGS+I ++R+GLGI
Sbjct: 138 VEKLAELEPS----ADTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGI 197

Query: 271 ATNNVAEYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWKVKNENIAELCNEVMKL 330
           ATNN AEY  ++LGLK+A+EKG+T+I V+ DSKLVCMQ++G WKV +E +++L  E  +L
Sbjct: 198 ATNNAAEYHGLILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQL 257

Query: 331 KDKFLSFEISHVLRNLNSEADAEANLAVTLPDGEAQ 367
            DK LSFEISHVLR+LNS+AD +AN+A  L +GE +
Sbjct: 258 SDKCLSFEISHVLRSLNSDADEQANMAARLSEGEVE 257

[Close]

BLAST of Cp4.1LG11g07390 vs. TAIR 10
Match: AT3G01410.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 272.7 bits (696), Expect = 4.3e-73
Identity = 138/292 (47.26%), Postives = 197/292 (67.47%), Query Frame = 0


Query: 84  MEPDMGDFFVVRKGDVVGVYKSFTDCQAQIGSSICDLPVSVYKGHSLPKDTGEYLASVGL 143
           ME +   F++VRKGD++GVY+S ++CQ Q GSS+    +SVYKG+  PK   + L+S G+
Sbjct: 5   MEDEKDAFYIVRKGDIIGVYRSLSECQGQAGSSVSHPAMSVYKGYGWPKGAEDLLSSFGI 64

Query: 144 KNALYTIKAADMRPDLFSSLVPCTFHDEATSLKGEASGQDAIKKRSRETIVSENIGSTVL 203
           KNAL+++ A+ ++ D F  L+PC     ++S +GE+  + +  KR       +++GS   
Sbjct: 65  KNALFSVNASHVKDDAFGKLIPCPVQQPSSS-QGESLNKSSPSKR------LQDMGSGES 124

Query: 204 TPTSKDPLRKHVKLEDSVVSQAPSN---------HESCFLEFDGASKGNPGQAGAGAVLR 263
              S  P +K +K+E+ ++ + PS+         ++SC +EFDGASKGNPG+AGAGAVLR
Sbjct: 125 GSFSPSPPQKQLKIENDMLRRIPSSLLTRTPIRQNDSCTIEFDGASKGNPGKAGAGAVLR 184

Query: 264 AHDGSVICRLREGLGIATNNVAEYRAILLGLKYALEKGFTRIHVQGDSKLVCMQVQGLWK 323
           A D SV+  LREG+G ATNNVAEYRA+LLGL+ AL+KGF  +HV GDS LVCMQVQG WK
Sbjct: 185 ASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQVQGAWK 244

Query: 324 VKNENIAELCNEVMKLKDKFLSFEISHVLRNLNSEADAEANLAVTLPDGEAQ 367
             +  +AELC +  +L + F +F+I H+ R  NSEAD +AN A+ L DG+ Q
Sbjct: 245 TNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQ 289

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g07390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P9WLH5	5.6e-17	42.86	Bifunctional protein Rv2228c OS=Mycobacterium tuberculosis (strain ATCC 25618 / ...	[more]
P9WLH4	5.6e-17	42.86	Uncharacterized protein MT2287 OS=Mycobacterium tuberculosis (strain CDC 1551 / ...	[more]
P64956	5.6e-17	42.86	Uncharacterized protein Mb2253c OS=Mycobacterium bovis (strain ATCC BAA-935 / AF...	[more]
Q9HSF6	1.6e-16	40.65	Ribonuclease HI OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC...	[more]
P54162	2.4e-07	32.26	14.7 kDa ribonuclease H-like protein OS=Bacillus subtilis (strain 168) OX=224308...	[more]

BLAST of Cp4.1LG11g07390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547239.1	1.41e-270	100.00	uncharacterized protein LOC111806115 [Cucurbita pepo subsp. pepo]	[more]
XP_022946833.1	7.50e-266	98.38	uncharacterized protein LOC111450776 [Cucurbita moschata] >KAG6599028.1 hypothet...	[more]
KAG6599033.1	1.51e-265	98.38	hypothetical protein SDJN03_08811, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7029985.1	8.89e-261	95.03	hypothetical protein SDJN02_08329 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022999715.1	3.27e-260	95.95	uncharacterized protein LOC111493983 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g07390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4Y7	3.63e-266	98.38	uncharacterized protein LOC111450776 OS=Cucurbita moschata OX=3662 GN=LOC1114507...	[more]
A0A6J1KGD7	1.58e-260	95.95	uncharacterized protein LOC111493983 OS=Cucurbita maxima OX=3661 GN=LOC111493983...	[more]
A0A0A0KTZ9	8.50e-220	82.89	RNase H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G489310 PE=...	[more]
A0A5A7TCE2	1.35e-219	82.01	RNase H family protein, putative isoform 2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CPT7	1.35e-219	82.01	uncharacterized protein LOC103503315 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG11g07390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24090.1	5.3e-87	49.05	RNase H family protein	[more]
AT5G51080.1	8.4e-77	46.06	RNase H family protein	[more]
AT5G51080.2	8.4e-77	46.06	RNase H family protein	[more]
AT5G51080.3	5.1e-74	50.72	RNase H family protein	[more]
AT3G01410.1	4.3e-73	47.26	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 236..357 e-value: 1.1E-29 score: 102.8
IPR002156	Ribonuclease H domain	PROSITE	PS50879	RNASE_H	coord: 228..359 score: 16.4624
IPR011320	Ribonuclease H1, N-terminal	PFAM	PF01693	Cauli_VI	coord: 91..113 e-value: 5.7E-4 score: 20.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 232..361 e-value: 5.5E-37 score: 128.8
None	No IPR available	PANTHER	PTHR46387	POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN	coord: 102..366
None	No IPR available	PANTHER	PTHR46387:SF14	PUTATIVE-RELATED	coord: 102..366
None	No IPR available	CDD	cd09279	RNase_HI_like	coord: 232..357 e-value: 5.8973E-52 score: 167.264
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 231..355

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g07390.1	Cp4.1LG11g07390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity