Cp4.1LG11g07230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACAAGGGAATATCTTTACTAGCAAGCATGGAGCATGGAGATATTGTGAGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCGTGCTCTCCCATCCTTCAAGTTCCTACAAACATATCATAATAGTTGCGGCCATTGCATCCGGACTCCAATTTGGTTGGCCCATCCGCCTCCCAACGTCAGGGCTGGAGCCTTTTCAATCTTTTCTTCAAATTCCAACGCGGGGCAAGGTAGGTACCAAATTCCTAACTTACTTCCCTCCCTTGGCGCTTTACCTATAAATGACTAAGAAGGGGTATTTGTGTAATCCCACGTGGGACAGGGCTGTCCTTGGGAATCCTGAACCTGTTCATAGTGATCCCACAGCTTTTAGTGTCGGCAGTTAGTGGTCCCTTAGACGCAGCCTTCGGGGGAGGGAACTTACCGGCGTTCGTGATGGGTGGAATTGCGGCCTTTGCAAGCTCCATGTGTGCCATCTTCCTTCTCCCCGACCCACCACCTCAGTCTGATGTCTCCTTAACAATGGGCGGTGCCCATTGATTCTTCCACCACTCTCTCATTCTTCCAATTTTTGTATCAGCTTCTTCCTTA ATGCAACAAGGGAATATCTTTACTAGCAAGCATGGAGCATGGAGATATTGTGAGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCGTGCTCTCCCATCCTTCAAGTTCCTACAAACATATCATAATAGTTGCGGCCATTGCATCCGGACTCCAATTTGGTTGGCCCATCCGCCTCCCAACGTCAGGGCTGGAGCCTTTTCAATCTTTTCTTCAAATTCCAACGCGGGGCAAGGGCTGTCCTTGGGAATCCTGAACCTGTTCATAGTGATCCCACAGCTTTTAGTGTCGGCAGTTAGTGGTCCCTTAGACGCAGCCTTCGGGGGAGGGAACTTACCGGCGTTCGTGATGGGTGGAATTGCGGCCTTTGCAAGCTCCATGTGTGCCATCTTCCTTCTCCCCGACCCACCACCTCAGTCTGATGTCTCCTTAACAATGGGCGGTGCCCATTGATTCTTCCACCACTCTCTCATTCTTCCAATTTTTGTATCAGCTTCTTCCTTA ATGCAACAAGGGAATATCTTTACTAGCAAGCATGGAGCATGGAGATATTGTGAGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCAAGGGCGTGCTCTCCCATCCTTCAAGTTCCTACAAACATATCATAATAGTTGCGGCCATTGCATCCGGACTCCAATTTGGTTGGCCCATCCGCCTCCCAACGTCAGGGCTGGAGCCTTTTCAATCTTTTCTTCAAATTCCAACGCGGGGCAAGGGCTGTCCTTGGGAATCCTGAACCTGTTCATAGTGATCCCACAGCTTTTAGTGTCGGCAGTTAGTGGTCCCTTAGACGCAGCCTTCGGGGGAGGGAACTTACCGGCGTTCGTGATGGGTGGAATTGCGGCCTTTGCAAGCTCCATGTGTGCCATCTTCCTTCTCCCCGACCCACCACCTCAGTCTGATGTCTCCTTAACAATGGGCGGTGCCCATTGA MQQGNIFTSKHGAWRYCEQGQGQGQGQGQGQGRALPSFKFLQTYHNSCGHCIRTPIWLAHPPPNVRAGAFSIFSSNSNAGQGLSLGILNLFIVIPQLLVSAVSGPLDAAFGGGNLPAFVMGGIAAFASSMCAIFLLPDPPPQSDVSLTMGGAH Homology
BLAST of Cp4.1LG11g07230 vs. ExPASy Swiss-Prot
Match: Q39232 (Sucrose transport protein SUC1 OS=Arabidopsis thaliana OX=3702 GN=SUC1 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 7.0e-22 Identity = 62/136 (45.59%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy Swiss-Prot
Match: Q03411 (Sucrose transport protein OS=Spinacia oleracea OX=3562 PE=2 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 9.1e-22 Identity = 50/81 (61.73%), Postives = 65/81 (80.25%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy Swiss-Prot
Match: Q9C8X2 (Sucrose transport protein SUC5 OS=Arabidopsis thaliana OX=3702 GN=SUC5 PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 3.8e-20 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy Swiss-Prot
Match: Q39231 (Sucrose transport protein SUC2 OS=Arabidopsis thaliana OX=3702 GN=SUC2 PE=1 SV=2) HSP 1 Score: 98.6 bits (244), Expect = 6.5e-20 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy Swiss-Prot
Match: Q9FG00 (Sucrose transport protein SUC9 OS=Arabidopsis thaliana OX=3702 GN=SUC9 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-16 Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. NCBI nr
Match: XP_022946002.1 (sucrose transport protein SUC8-like [Cucurbita moschata]) HSP 1 Score: 178 bits (452), Expect = 1.76e-50 Identity = 94/117 (80.34%), Postives = 95/117 (81.20%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. NCBI nr
Match: XP_022972836.1 (sucrose transport protein SUC8-like [Cucurbita maxima] >XP_022972837.1 sucrose transport protein SUC8-like [Cucurbita maxima]) HSP 1 Score: 178 bits (452), Expect = 1.76e-50 Identity = 94/117 (80.34%), Postives = 95/117 (81.20%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. NCBI nr
Match: KAG6598988.1 (Sucrose transport protein SUC2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176 bits (445), Expect = 1.96e-49 Identity = 92/117 (78.63%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. NCBI nr
Match: KAG7029956.1 (Sucrose transport protein SUC2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 176 bits (445), Expect = 2.03e-49 Identity = 92/117 (78.63%), Postives = 94/117 (80.34%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. NCBI nr
Match: XP_031736522.1 (LOW QUALITY PROTEIN: sucrose transport protein SUC8-like [Cucumis sativus]) HSP 1 Score: 159 bits (401), Expect = 4.28e-43 Identity = 84/117 (71.79%), Postives = 90/117 (76.92%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy TrEMBL
Match: A0A6J1I5X0 (sucrose transport protein SUC8-like OS=Cucurbita maxima OX=3661 GN=LOC111471355 PE=3 SV=1) HSP 1 Score: 178 bits (452), Expect = 8.53e-51 Identity = 94/117 (80.34%), Postives = 95/117 (81.20%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy TrEMBL
Match: A0A6J1G2G8 (sucrose transport protein SUC8-like OS=Cucurbita moschata OX=3662 GN=LOC111450220 PE=3 SV=1) HSP 1 Score: 178 bits (452), Expect = 8.53e-51 Identity = 94/117 (80.34%), Postives = 95/117 (81.20%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy TrEMBL
Match: A0A345FZL7 (Sucrose transporter 1 OS=Cucumis sativus OX=3659 GN=SUT1 PE=2 SV=1) HSP 1 Score: 159 bits (401), Expect = 2.44e-43 Identity = 84/117 (71.79%), Postives = 90/117 (76.92%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy TrEMBL
Match: A0A5D3CTK7 (Sucrose transport protein SUC8-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold745G00050 PE=3 SV=1) HSP 1 Score: 152 bits (384), Expect = 7.26e-41 Identity = 80/117 (68.38%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. ExPASy TrEMBL
Match: A0A1S3CP46 (sucrose transport protein SUC8-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503171 PE=3 SV=1) HSP 1 Score: 152 bits (384), Expect = 7.26e-41 Identity = 80/117 (68.38%), Postives = 88/117 (75.21%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. TAIR 10
Match: AT1G71880.1 (sucrose-proton symporter 1 ) HSP 1 Score: 105.1 bits (261), Expect = 4.9e-23 Identity = 62/136 (45.59%), Postives = 77/136 (56.62%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. TAIR 10
Match: AT1G71890.1 (Major facilitator superfamily protein ) HSP 1 Score: 99.4 bits (246), Expect = 2.7e-21 Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. TAIR 10
Match: AT1G22710.1 (sucrose-proton symporter 2 ) HSP 1 Score: 98.6 bits (244), Expect = 4.6e-21 Identity = 54/114 (47.37%), Postives = 66/114 (57.89%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. TAIR 10
Match: AT5G06170.1 (sucrose-proton symporter 9 ) HSP 1 Score: 86.3 bits (212), Expect = 2.4e-17 Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Cp4.1LG11g07230 vs. TAIR 10
Match: AT2G14670.1 (sucrose-proton symporter 8 ) HSP 1 Score: 84.3 bits (207), Expect = 9.0e-17 Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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