Cp4.1LG11g07170 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g07170
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	MYB domain class transcription factor
Location	Cp4.1LG11: 5191800 .. 5193221 (-)
RNA-Seq Expression	Cp4.1LG11g07170
Synteny	Cp4.1LG11g07170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGAAGACTTGGTAACAGTTGAGTACCATTGCCGTATCATAATCTGTCAGAAAAAACAAACAAAACAAAACAATATTCAAATCAAAAACCCAAACCCCCCGCATAAGGATTCACCCAATTTCTCATTCTCCTTCCACTTCTTATGGCCACCGAAACAGATCCCACGAAGCACTCCAACGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATCGCCCACAAGCTCCAAGGCAGATCTGGTACACACTTTACTCCCCTTTTCAACAATGGGTTTTGAAGATTTTGGTAATTCACTCTGTTTTGGCAGGGAAGAGTTGCAGATTGAGATGGCTAAACCAACTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTGTGATTTCTAGGCTTTTTCCTGGAAGAACTGATAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAACCGATTCTCTCAACCGCCGCCGCCGCCCTCCTCCGGTGGTGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGATTGAAGGCGTTTAGGAAGGCAAGGAAGAGCAGAGTTGGTGAGAAGATGGGCGTGGTCCAATATTTGGGTTGGGCTGTTGGAGTGGTGAAAAGATCCGCAGTCAGTGGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGGCATTGAAAGCTACGTATAATCCCAACGCCCAAACCCATCATTTTCTTCTACCCTTTCTTTTTGCTCCATATTCAATGTCACCTTACTTTTCATCACTGCTTCATTGGGATTCATGTTCATTATTAATAATAGGAATGAAAAAA

mRNA sequence

CACGAAGACTTGGTAACAGTTGAGTACCATTGCCGTATCATAATCTGTCAGAAAAAACAAACAAAACAAAACAATATTCAAATCAAAAACCCAAACCCCCCGCATAAGGATTCACCCAATTTCTCATTCTCCTTCCACTTCTTATGGCCACCGAAACAGATCCCACGAAGCACTCCAACGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATCGCCCACAAGCTCCAAGGCAGATCTGGGAAGAGTTGCAGATTGAGATGGCTAAACCAACTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTGTGATTTCTAGGCTTTTTCCTGGAAGAACTGATAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAACCGATTCTCTCAACCGCCGCCGCCGCCCTCCTCCGGTGGTGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGATTGAAGGCGTTTAGGAAGGCAAGGAAGAGCAGAGTTGGTGAGAAGATGGGCGTGGTCCAATATTTGGGTTGGGCTGTTGGAGTGGTGAAAAGATCCGCAGTCAGTGGGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGGCATTGAAAGCTACGTATAATCCCAACGCCCAAACCCATCATTTTCTTCTACCCTTTCTTTTTGCTCCATATTCAATGTCACCTTACTTTTCATCACTGCTTCATTGGGATTCATGTTCATTATTAATAATAGGAATGAAAAAA

Coding sequence (CDS)

ATGGCCACCGAAACAGATCCCACGAAGCACTCCAACGGAAGCCTTTGTGGCAGAGGACACTGGAGGCCCGCCGAGGACACCAAGCTTAAGGAACTCGTCGCCCTTCATGGCCCTCACAACTGGAACCTCATCGCCCACAAGCTCCAAGGCAGATCTGGGAAGAGTTGCAGATTGAGATGGCTAAACCAACTGGACCCCAGGATTAACCGAACGGCCTTCACGGAACAGGAAGAGGAGAGGTTAATGCAGGCACATGGAATTTACGGCAACAAATGGGCTGTGATTTCTAGGCTTTTTCCTGGAAGAACTGATAATGGTGTGAAGAATCACTGGCATGTTATAATGGCTAGAAAGTGTAGACAACAACACATCGCTTCTTACACGAGGAGGAACCGATTCTCTCAACCGCCGCCGCCGCCCTCCTCCGGTGGTGGTTTGGAAGGGGGTGAACCGGCGTTCATCGACTTTCTTGGAGTAGGAGGCAGATGA

Protein sequence

MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRRNRFSQPPPPPSSGGGLEGGEPAFIDFLGVGGR

Homology

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 9.5e-54
Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S  S+ GRGHWRPAED KLKELV+++GP NWNLIA KLQGRSGKSCRLRW NQLDPRINR
Sbjct: 91  SKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINR 150

Query: 71  TAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWA+I+RLFPGRTDN VKNHWHV+MARK R +H ++Y RR
Sbjct: 151 RAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR-EHSSAYRRR 210

Query: 131 NRFSQPPPPP 141
              S  P  P
Sbjct: 211 KLMSNNPLKP 219

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 1.6e-53
Identity = 97/121 (80.17%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 10  HSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRIN 69
           HS+ +   RGHWRPAEDTKLKELVA++GP NWNLIA KLQGRSGKSCRLRW NQLDPRIN
Sbjct: 99  HSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 158

Query: 70  RTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTR 129
           R AFTE+EEERLMQAH +YGNKWA+I+RLFPGRTDN VKNHWHVIMARK R+Q  +SY R
Sbjct: 159 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQS-SSYRR 218

Query: 130 R 131
           R
Sbjct: 219 R 218

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 204.9 bits (520), Expect = 6.8e-52
Identity = 99/148 (66.89%), Postives = 109/148 (73.65%), Query Frame = 0


Query: 4   ETDPTKHS---NGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 63
           ET+   H     G LC RGHWRPAED KLK+LVA +GP NWNLIA KL GRSGKSCRLRW
Sbjct: 32  ETEEGGHGGGVQGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRW 91

Query: 64  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 123
            NQLDPRINR AFTE+EEERLM AH  YGNKWA+I+RLFPGRTDN VKNHWHV+MAR+ R
Sbjct: 92  FNQLDPRINRRAFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHR 151

Query: 124 QQHIASYTRRNRFSQ--------PPPPP 141
           +Q  A   R+   S         PPPPP
Sbjct: 152 EQSGAFRRRKPSSSSASPAPAPAPPPPP 179

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.7e-47
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 15  LCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFT 74
           +C RGHWRPAED KLK+LV  +GPHNWN IA KL GRSGKSCRLRW NQLDPRINR  FT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 75  EQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQ 122
           E+EEERL+ AH I+GN+W++I+RLFPGRTDN VKNHWHVIMAR+ RQ
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.3e-47
Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 0


Query: 12  NGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRT 71
           N  +C RGHWRP ED KLKELVA  GP NWNLI++ L GRSGKSCRLRW NQLDPRIN+ 
Sbjct: 87  NTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKR 146

Query: 72  AFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRRN 131
           AFTE+EE RL+ AH  YGNKWA+ISRLFPGRTDN VKNHWHVIMAR+ R+      ++R 
Sbjct: 147 AFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE------SQRQ 206

Query: 132 RFSQPPP 139
           R  QPPP
Sbjct: 207 R-QQPPP 206

[Close]

BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: XP_023547176.1 (transcription factor MYB105-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347 bits (891), Expect = 5.55e-121
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPPPPPSSGGGLEGGEPAFIDFLGVGGR 162
           QQHIASYTRRNRFSQPPPPPSSGGGLEGGEPAFIDFLGVGGR
Sbjct: 121 QQHIASYTRRNRFSQPPPPPSSGGGLEGGEPAFIDFLGVGGR 162

[Close]

BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: KAG7029955.1 (Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 338 bits (867), Expect = 3.03e-117
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPPPPP-----SSGGGLEGGEPAFIDFLGVGGR 162
           QQHIASYTRR+RFSQPPPPP     SSGGGLEGGEPAFIDFLGVGGR
Sbjct: 121 QQHIASYTRRSRFSQPPPPPPSPPPSSGGGLEGGEPAFIDFLGVGGR 167

[Close]

BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: XP_022946906.1 (transcription factor CSA-like [Cucurbita moschata])

HSP 1 Score: 337 bits (865), Expect = 7.81e-117
Identity = 161/174 (92.53%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPPPPP------------SSGGGLEGGEPAFIDFLGVGGR 162
           QQHIASYTRRNRFSQPPPPP            SSGGGLEGGEPAFIDFLGVGGR
Sbjct: 121 QQHIASYTRRNRFSQPPPPPPPPPPPPPPPPPSSGGGLEGGEPAFIDFLGVGGR 174

[Close]

BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: XP_022972861.1 (transcription factor MYB105-like [Cucurbita maxima])

HSP 1 Score: 336 bits (862), Expect = 1.75e-116
Identity = 159/167 (95.21%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSN SLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNVSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPPPPP-----SSGGGLEGGEPAFIDFLGVGGR 162
           QQH+ASYTRRNRFSQPPPPP     SSGGGLEGGEPAFIDFLGVGGR
Sbjct: 121 QQHVASYTRRNRFSQPPPPPPPPPPSSGGGLEGGEPAFIDFLGVGGR 167

[Close]

BLAST of Cp4.1LG11g07170 vs. NCBI nr
Match: KAG6598986.1 (Transcription factor MYB105, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 331 bits (848), Expect = 7.09e-114
Identity = 156/167 (93.41%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           + T+ DPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 32  IRTKQDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 91

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 92  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 151

Query: 121 QQHIASYTRRNRFSQPPPPP-----SSGGGLEGGEPAFIDFLGVGGR 162
           QQHIASYTRR+RFSQPPPPP     SSGGGLEGGEPAFIDFLGVGGR
Sbjct: 152 QQHIASYTRRSRFSQPPPPPPPPPPSSGGGLEGGEPAFIDFLGVGGR 198

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy TrEMBL
Match: A0A6J1G4W7 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111450847 PE=4 SV=1)

HSP 1 Score: 337 bits (865), Expect = 3.78e-117
Identity = 161/174 (92.53%), Postives = 162/174 (93.10%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPPPPP------------SSGGGLEGGEPAFIDFLGVGGR 162
           QQHIASYTRRNRFSQPPPPP            SSGGGLEGGEPAFIDFLGVGGR
Sbjct: 121 QQHIASYTRRNRFSQPPPPPPPPPPPPPPPPPSSGGGLEGGEPAFIDFLGVGGR 174

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy TrEMBL
Match: A0A6J1I745 (transcription factor MYB105-like OS=Cucurbita maxima OX=3661 GN=LOC111471371 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 8.49e-117
Identity = 159/167 (95.21%), Postives = 161/167 (96.41%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MATETDPTKHSN SLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW
Sbjct: 1   MATETDPTKHSNVSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
           LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWA+ISRLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAMISRLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPPPPP-----SSGGGLEGGEPAFIDFLGVGGR 162
           QQH+ASYTRRNRFSQPPPPP     SSGGGLEGGEPAFIDFLGVGGR
Sbjct: 121 QQHVASYTRRNRFSQPPPPPPPPPPSSGGGLEGGEPAFIDFLGVGGR 167

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy TrEMBL
Match: A0A6J1GCC3 (transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111452673 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.61e-71
Identity = 112/169 (66.27%), Postives = 126/169 (74.56%), Query Frame = 0


Query: 1   MATETDPTKHSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRW 60
           MAT++D    +N   C RGHWRPAED KL+ELVAL+GP NWNLIA KL GRSGKSCRLRW
Sbjct: 1   MATKSDMNSGTNAKACARGHWRPAEDAKLRELVALYGPQNWNLIAEKLDGRSGKSCRLRW 60

Query: 61  LNQLDPRINRTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCR 120
            NQLDPRINR AFT++EEERLMQAH ++GNKWA+I+RLFPGRTDNGVKNHWHVIMARKCR
Sbjct: 61  FNQLDPRINRRAFTQEEEERLMQAHRVHGNKWAMIARLFPGRTDNGVKNHWHVIMARKCR 120

Query: 121 QQHIASYTRRNRFSQPP-------PPPSSGGGLEGGEPA-FIDFLGVGG 161
             H  +  RR R +          PPP     +E   PA F DFLGVGG
Sbjct: 121 H-HFGAGRRRRRTTTSDEDSATNQPPPFMDRRVE---PALFFDFLGVGG 165

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy TrEMBL
Match: A0A6J1CRP1 (transcription factor MYB105-like OS=Momordica charantia OX=3673 GN=LOC111014141 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 1.41e-69
Identity = 102/128 (79.69%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 15  LCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFT 74
           LC RGHWRPAED KLKELVAL+GP NWNLIA KLQGRSGKSCRLRW NQLDPRINR AFT
Sbjct: 37  LCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFT 96

Query: 75  EQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRRNRFS 134
           E+EEERLMQAH +YGNKWA I+RLFPGRTDN VKNHWHVIMARKCR+Q  ++Y RR + +
Sbjct: 97  EEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQ-FSAY-RRRKLA 156

Query: 135 QPPPPPSS 142
           QPP  P+S
Sbjct: 157 QPPCAPAS 162

[Close]

BLAST of Cp4.1LG11g07170 vs. ExPASy TrEMBL
Match: A0A0A0LHV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 2.37e-68
Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = 0


Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S   +CGRGHWRPAEDTKLKELV L+GP NWNLIA KL+GRSGKSCRLRW NQLDPRINR
Sbjct: 4   SKSKVCGRGHWRPAEDTKLKELVGLYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINR 63

Query: 71  TAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWA+I+RLFPGRTDNGVKNHWHV+MAR CRQ H +SY R 
Sbjct: 64  KAFTEEEEERLMQAHEMYGNKWAMIARLFPGRTDNGVKNHWHVVMARNCRQ-HFSSYRRS 123

Query: 131 NR 132
           +R
Sbjct: 124 SR 124

[Close]

BLAST of Cp4.1LG11g07170 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 211.1 bits (536), Expect = 6.8e-55
Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S  S+ GRGHWRPAED KLKELV+++GP NWNLIA KLQGRSGKSCRLRW NQLDPRINR
Sbjct: 91  SKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINR 150

Query: 71  TAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWA+I+RLFPGRTDN VKNHWHV+MARK R +H ++Y RR
Sbjct: 151 RAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR-EHSSAYRRR 210

Query: 131 NRFSQPPPPP 141
              S  P  P
Sbjct: 211 KLMSNNPLKP 219

[Close]

BLAST of Cp4.1LG11g07170 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 211.1 bits (536), Expect = 6.8e-55
Identity = 97/130 (74.62%), Postives = 109/130 (83.85%), Query Frame = 0


Query: 11  SNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINR 70
           S  S+ GRGHWRPAED KLKELV+++GP NWNLIA KLQGRSGKSCRLRW NQLDPRINR
Sbjct: 91  SKPSVLGRGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINR 150

Query: 71  TAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRR 130
            AFTE+EEERLMQAH +YGNKWA+I+RLFPGRTDN VKNHWHV+MARK R +H ++Y RR
Sbjct: 151 RAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYR-EHSSAYRRR 210

Query: 131 NRFSQPPPPP 141
              S  P  P
Sbjct: 211 KLMSNNPLKP 219

[Close]

BLAST of Cp4.1LG11g07170 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54
Identity = 97/121 (80.17%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 10  HSNGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRIN 69
           HS+ +   RGHWRPAEDTKLKELVA++GP NWNLIA KLQGRSGKSCRLRW NQLDPRIN
Sbjct: 99  HSSKASVSRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRIN 158

Query: 70  RTAFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTR 129
           R AFTE+EEERLMQAH +YGNKWA+I+RLFPGRTDN VKNHWHVIMARK R+Q  +SY R
Sbjct: 159 RRAFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQS-SSYRR 218

Query: 130 R 131
           R
Sbjct: 219 R 218

[Close]

BLAST of Cp4.1LG11g07170 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 190.3 bits (482), Expect = 1.2e-48
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 0


Query: 15  LCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRTAFT 74
           +C RGHWRPAED KLK+LV  +GPHNWN IA KL GRSGKSCRLRW NQLDPRINR  FT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 75  EQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQ 122
           E+EEERL+ AH I+GN+W++I+RLFPGRTDN VKNHWHVIMAR+ RQ
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]

BLAST of Cp4.1LG11g07170 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 189.9 bits (481), Expect = 1.6e-48
Identity = 89/127 (70.08%), Postives = 100/127 (78.74%), Query Frame = 0


Query: 12  NGSLCGRGHWRPAEDTKLKELVALHGPHNWNLIAHKLQGRSGKSCRLRWLNQLDPRINRT 71
           N  +C RGHWRP ED KLKELVA  GP NWNLI++ L GRSGKSCRLRW NQLDPRIN+ 
Sbjct: 87  NTKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKR 146

Query: 72  AFTEQEEERLMQAHGIYGNKWAVISRLFPGRTDNGVKNHWHVIMARKCRQQHIASYTRRN 131
           AFTE+EE RL+ AH  YGNKWA+ISRLFPGRTDN VKNHWHVIMAR+ R+      ++R 
Sbjct: 147 AFTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE------SQRQ 206

Query: 132 RFSQPPP 139
           R  QPPP
Sbjct: 207 R-QQPPP 206

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g07170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQX5	9.5e-54	74.62	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9SEZ4	1.6e-53	80.17	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]
Q5NBM8	6.8e-52	66.89	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9FX36	1.7e-47	76.64	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q6R053	2.3e-47	70.08	Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1	[more]

BLAST of Cp4.1LG11g07170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547176.1	5.55e-121	100.00	transcription factor MYB105-like [Cucurbita pepo subsp. pepo]	[more]
KAG7029955.1	3.03e-117	95.81	Transcription factor MYB-like protein, partial [Cucurbita argyrosperma subsp. ar...	[more]
XP_022946906.1	7.81e-117	92.53	transcription factor CSA-like [Cucurbita moschata]	[more]
XP_022972861.1	1.75e-116	95.21	transcription factor MYB105-like [Cucurbita maxima]	[more]
KAG6598986.1	7.09e-114	93.41	Transcription factor MYB105, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG11g07170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4W7	3.78e-117	92.53	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111450847 PE=4...	[more]
A0A6J1I745	8.49e-117	95.21	transcription factor MYB105-like OS=Cucurbita maxima OX=3661 GN=LOC111471371 PE=...	[more]
A0A6J1GCC3	1.61e-71	66.27	transcription factor CSA-like OS=Cucurbita moschata OX=3662 GN=LOC111452673 PE=4...	[more]
A0A6J1CRP1	1.41e-69	79.69	transcription factor MYB105-like OS=Momordica charantia OX=3673 GN=LOC111014141 ...	[more]
A0A0A0LHV6	2.37e-68	80.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G100550 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g07170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26780.1	6.8e-55	74.62	myb domain protein 117	[more]
AT1G26780.2	6.8e-55	74.62	myb domain protein 117	[more]
AT1G69560.1	1.2e-54	80.17	myb domain protein 105	[more]
AT1G73410.1	1.2e-48	76.64	myb domain protein 54	[more]
AT5G17800.1	1.6e-48	70.08	myb domain protein 56	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 17..66 e-value: 7.7E-15 score: 65.3 coord: 69..117 e-value: 6.9E-12 score: 55.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 65..115 score: 9.10553
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 18..64 score: 10.371282
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 21..62 e-value: 1.25336E-13 score: 59.5114
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 72..112 e-value: 8.72294E-9 score: 47.185
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 18..64 e-value: 2.1E-16 score: 59.8 coord: 70..113 e-value: 1.8E-13 score: 50.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 18..64 score: 18.417995
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 65..119 score: 24.000002
None	No IPR available	GENE3D	1.10.10.60		coord: 71..135 e-value: 1.7E-17 score: 65.2
None	No IPR available	GENE3D	1.10.10.60		coord: 18..69 e-value: 1.5E-22 score: 81.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR45614:SF175	TRANSCRIPTION FACTOR MYB105	coord: 6..130
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 6..130
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 18..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g07170.1	Cp4.1LG11g07170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding