Cp4.1LG11g06640 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g06640
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	prefoldin subunit 1-like
Location	Cp4.1LG11: 4385388 .. 4388483 (+)
RNA-Seq Expression	Cp4.1LG11g06640
Synteny	Cp4.1LG11g06640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAATTTGAAAATTAGATCCGACCCGGTAGATCACACTTATATTGGACCCTAAAAGACTGAAAACGTTCATTTTTGTATCAACACGTCCTCTCCGCGAGCTCTGAATCTTGGGAATGGCGGACGACGCGAACAGAGCTGTGAGTACTATTACTCTTTTACTCTTCTTTTTTCCCTTCCCTGCTGCCATTTTACATATGCATGAGCTTTTTTTTTTCCCCCTTGAATCAGACTTTCTTGGAAATCCAAGGTCGCATGATTGAGATTACTGGGAAGCTGAAGCAGGTAATTCCCTTTGGATTCACTTGAAGTATTTTAAGGTAATCTTTTGTATTTGTAGGAATGAAGGCTTTTAGTAATTCATGTCTGGATTGATCTTACAGGTGTTGTGCTGATGATTAAAAGCTTCTTATTTTTCTTCGTATTTATTTAGTAATGTGAATGAATTTATCCTGGGTCAATTGCTGAATCTAATCAATGTTTGTTTCTTGTTTCTTGTACATTTATTTGATGTTTAATCGTTTTCTTTTTCCTTTTTTTCTTAGTACATTTATTTAGTAAAATCCATAGAAGAATGTTAATTCCTTACTACATTTAGATTTCCGAATATCTCTGAAAAATCCTTTTACAATGAAGATGAAGATGCTAGCTTCCTCAATAATCACTTCACCATAAAAAATGGAGGGAAACATCACCTTTAGAGGCTGGTTGGTGATCCACTTATCTTCTCAAAAAGGAATATCTTAGCCATCACCAACCTTGTAAACATACATTTTTCCAGAAAAAGCTACTGGTCTTCATAGTCTCCTTCCAAGGGCCTAAGGAGCCCTTGCAATCAACTTTGTTGGCCAAAGTTTTAATTTCACCACTAATCTCCAGAGAGCGTTTTTTCTCTTCAAATGTTTATGCACAGCTGACATTTTCCATTGTCAGTCTCTTATCAAAGATGGTCTATTTTCTTTGTAATTTCACCACAAGTCTCTTTTTGAAGCTCTCTGACTTGGGTTAGTTTCTGGAATGTCAAATACATAATATATGGCATAGAGACTAAGGCATATCCTGATCATCTCAAGATTAAAATGCCGATGCGCCGTATATCTTTTGTGCATTTCAATATTAGTTCTTTGTCATTCTTCACGTTTCACTTTATCTGAACAGAGAATCCTTTCTTTGCAGGTGCAGACCCAAATAAGAAACAAGGAGGGAGAAAAGAAGCGCGCCTTTTTAACCTTGGAGGAACTCAAACAGTTGTCTGATGACACTAATGCATACAAATCTATAGGTGCTTAACAACAAAGCTTTGTTTTTTAACCGGAAGGTTCACTCTTAACCTAAATTATGATTAGCTGCCAAAACGTGTAATATTCTTTTTAGATTGACTGATACTTAGCACTGATTTACTTCCATCATTCTTTGTGGTGCAGGGAGAACGTGAGTTATGCTACAATAAGTAAACAACTTAAAGTTAGATTTTTTTTATTTCTCAAATGATACAGATGAAATTCTCTTACTTTGTGTGGTGTGGTCTCATTCTCACCAGGTTTGTTTTAGAGCCAAAGTCAGTTCTAATGAATGAACAGGAGCAAAAGCTAAAGGATAGTGAAGCTACAATTGATTCACTGCATGTACGTATTAGTATTACTTTCCTCTGTAGATACACAAAACCTTCCTTTGAACTTCCCAATTTTGTATGCCTGTCATTCACGTAGTCTTTTCTTGATTCAATTACGTTTGCCTTCAACCTTCCTTTGAACTTCCCAATTTTGTATGCCTGTCATTCACGTAGTCTTTTCTTGATTCAATTACGTTTGCCTTCACCTTGTGTGTAACGGTCCAAGCCCATCGCTAGCAGATATTGTTCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACACGTATGCTAAGGAGAGATTTCCACACCCTTATAAAGAATGTTTCGTTTTCCTCCTCAACCGATGTGGGATCTCACAATCTCACCCCCTTTCGGGGCCCAGCGTCCTCACTGACACTCATTCCCTTCTCCAATCGATGTGGGACCCCTCAATCCACTCCTCTTTGGGGCCTAGCGTCCTTGCTGGCACATCGTCCCGTGTCCACCCCCCTTCGGTGTTCAGCCTCTTCGCTGGCACATCGCCCAGTGTCTATGCTTTGATACTATTTGTAACGGTCCAAGCCCACCGCTAGCATATATGAAAACACGTCTACTAGAGAGAGGTTTTCACACCTTTATAAAGAATGTTTCGTTCTCCTCTCCAACGAATGTGGATCTCACATTTCGCTTCTTAGTTAAATATTTTATTGCCTTTGCCAATTAGCATTGCTCTGTCATTTCAATTTTTGCATTAACACACTAACCAACCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCACCCTCCGGATCTTCCTTTTGCATTTTACAGTATTTAGAGATATTCTTGTTTTATCGTTCTTTCTCCATTCATGAAAGATGATCGATCTTCATGCACATTTGTAGAGCTCAAAGGAGTATTTGGAGAAGCAGTTGGCAGAGGTGGAGAACAACTTGAGGGAGCTGCTGCAACAAGATCCAGGTATAGCTCGTCAGATTATGTCCATGTCTGTAGCATAAGGCAGGCTCTCCCCCATTGGATTTGTGATTAGCTAAGCTTCTTGTATCATTGTTGGGTCAGAAGAATATGACTGGTGTGATGTTGCGAGGTGTGATTCTACTTGGCTGGCTTCTATTATTTCTGATGTCAAAACTTTGTTTTTGATATGCAATTCATACTCCCAAGTCCCACATTCTCATTTTAAAAACTGTTTAATAGGCCATTGTTTTCAACTTTTTGCTAATAGGTTCGTCCACTGTAAAAAAGTCGATCGGTGTCCATAAATGC

mRNA sequence

GTGAATTTGAAAATTAGATCCGACCCGGTAGATCACACTTATATTGGACCCTAAAAGACTGAAAACGTTCATTTTTGTATCAACACGTCCTCTCCGCGAGCTCTGAATCTTGGGAATGGCGGACGACGCGAACAGAGCTACTTTCTTGGAAATCCAAGGTCGCATGATTGAGATTACTGGGAAGCTGAAGCAGGTGCAGACCCAAATAAGAAACAAGGAGGGAGAAAAGAAGCGCGCCTTTTTAACCTTGGAGGAACTCAAACAGTTGTCTGATGACACTAATGCATACAAATCTATAGGGAGAACGTTTGTTTTAGAGCCAAAGTCAGTTCTAATGAATGAACAGGAGCAAAAGCTAAAGGATAGTGAAGCTACAATTGATTCACTGCATAGCTCAAAGGAGTATTTGGAGAAGCAGTTGGCAGAGGTGGAGAACAACTTGAGGGAGCTGCTGCAACAAGATCCAGGTATAGCTCGTCAGATTATGTCCATGTCTGTAGCATAAGGCAGGCTCTCCCCCATTGGATTTGTGATTAGCTAAGCTTCTTGTATCATTGTTGGGTCAGAAGAATATGACTGGTGTGATGTTGCGAGGTGTGATTCTACTTGGCTGGCTTCTATTATTTCTGATGTCAAAACTTTGTTTTTGATATGCAATTCATACTCCCAAGTCCCACATTCTCATTTTAAAAACTGTTTAATAGGCCATTGTTTTCAACTTTTTGCTAATAGGTTCGTCCACTGTAAAAAAGTCGATCGGTGTCCATAAATGC

Coding sequence (CDS)

ATGGCGGACGACGCGAACAGAGCTACTTTCTTGGAAATCCAAGGTCGCATGATTGAGATTACTGGGAAGCTGAAGCAGGTGCAGACCCAAATAAGAAACAAGGAGGGAGAAAAGAAGCGCGCCTTTTTAACCTTGGAGGAACTCAAACAGTTGTCTGATGACACTAATGCATACAAATCTATAGGGAGAACGTTTGTTTTAGAGCCAAAGTCAGTTCTAATGAATGAACAGGAGCAAAAGCTAAAGGATAGTGAAGCTACAATTGATTCACTGCATAGCTCAAAGGAGTATTTGGAGAAGCAGTTGGCAGAGGTGGAGAACAACTTGAGGGAGCTGCTGCAACAAGATCCAGGTATAGCTCGTCAGATTATGTCCATGTCTGTAGCATAA

Protein sequence

MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIARQIMSMSVA

Homology

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BLAST of Cp4.1LG11g06640 vs. ExPASy Swiss-Prot
Match: Q3SZE2 (Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.0e-13
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADVQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELL 114
           L+ K  + N+  +K K +E  I  L   K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy Swiss-Prot
Match: Q9CWM4 (Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 40/107 (37.38%), Postives = 62/107 (57.94%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELL 114
           L+ K V+ N+  +K K ++  I  L   K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEVIHNQLLEKQKIAKEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy Swiss-Prot
Match: Q5RAM7 (Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.5e-13
Identity = 40/107 (37.38%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELL 114
           L+ K  + N+  +K K +E  I  L   K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHNQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy Swiss-Prot
Match: O60925 (Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-12
Identity = 39/107 (36.45%), Postives = 61/107 (57.01%), Query Frame = 0


Query: 7   RATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTFV 66
           +  F E+Q ++I+   K+K    QI      KK A LT  E+  L D+TN Y+ +GR F+
Sbjct: 10  KKAFTELQAKVIDTQQKVKLADIQIEQLNRTKKHAHLTDTEIMTLVDETNMYEGVGRMFI 69

Query: 67  LEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELL 114
           L+ K  + ++  +K K +E  I  L   K YLE+ + E E+N+RE+L
Sbjct: 70  LQSKEAIHSQLLEKQKIAEEKIKELEQKKSYLERSVKEAEDNIREML 116

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy Swiss-Prot
Match: Q54JS0 (Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.9e-10
Identity = 29/110 (26.36%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 6   NRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKSIGRTF 65
           ++  F E + ++  ++  L  ++ +I+  E ++K+  +T+ EL+ LS +T  YK++G+ F
Sbjct: 5   DKQAFFETREKLYTLSRSLNIIKQRIQIAENDRKKCLITINELESLSSETKTYKAVGKMF 64

Query: 66  VLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQ 116
           V+ P + L  E +Q+++  E  +  L +  +Y++ Q+ + E +L EL+++
Sbjct: 65  VISPMTSLKTELKQQVQKDEEDVKGLINQSKYIDAQITDTERSLNELVRK 114

[Close]

BLAST of Cp4.1LG11g06640 vs. NCBI nr
Match: XP_023546624.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240 bits (613), Expect = 1.17e-79
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. NCBI nr
Match: XP_022929581.1 (prefoldin subunit 1-like [Cucurbita moschata])

HSP 1 Score: 234 bits (598), Expect = 2.27e-77
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEA I SLHSSKEYLEKQLAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMS+A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. NCBI nr
Match: XP_022149806.1 (prefoldin subunit 1 [Momordica charantia])

HSP 1 Score: 222 bits (565), Expect = 2.45e-72
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANR  FLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEA I SL +SKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. NCBI nr
Match: XP_023536940.1 (prefoldin subunit 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221 bits (563), Expect = 4.94e-72
Identity = 120/129 (93.02%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQKLKDSEA I SL SSKEYLEKQ AEVENNLRELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. NCBI nr
Match: KAG6586128.1 (Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 219 bits (559), Expect = 2.01e-71
Identity = 119/129 (92.25%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQK KDSEA I SL SSKEYLEKQ AEVENNLRELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy TrEMBL
Match: A0A6J1ENI7 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1)

HSP 1 Score: 234 bits (598), Expect = 1.10e-77
Identity = 126/129 (97.67%), Postives = 127/129 (98.45%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEA I SLHSSKEYLEKQLAEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIGSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMS+A
Sbjct: 121 RQIMSMSLA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy TrEMBL
Match: A0A6J1D9I1 (prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1)

HSP 1 Score: 222 bits (565), Expect = 1.18e-72
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANR  FLEIQGRMIE+TGKLKQVQTQIRNKEGEKKRAFLTLEEL+QLS+DTNAYKS
Sbjct: 1   MADEANRIAFLEIQGRMIEVTGKLKQVQTQIRNKEGEKKRAFLTLEELRQLSEDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLEPKSVLMNEQEQKLKDSEA I SL +SKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLEPKSVLMNEQEQKLKDSEAAIASLQTSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy TrEMBL
Match: A0A6J1HND5 (prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 1.96e-71
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQKLKDSEA I SL SSKEYLEKQ AEVENNL+ELLQQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKLKDSEAAIVSLQSSKEYLEKQKAEVENNLKELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSM+VA
Sbjct: 121 RQIMSMTVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy TrEMBL
Match: A0A6J1FB94 (prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 8.00e-71
Identity = 117/129 (90.70%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ANRATFLEIQGRMIEITGKLKQVQ+Q+RNKEGEKKRAFLTLEELKQLSDDTNAYKS
Sbjct: 1   MADEANRATFLEIQGRMIEITGKLKQVQSQVRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGR FVLEPKSVLM EQEQK KDSEA I SL SSKEYLEKQ AEVENNL+EL+QQDPGIA
Sbjct: 61  IGRAFVLEPKSVLMAEQEQKFKDSEAAIVSLQSSKEYLEKQKAEVENNLKELVQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. ExPASy TrEMBL
Match: A0A0A0LJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 1.14e-70
Identity = 116/129 (89.92%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+ NRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQL++DTN YKS
Sbjct: 1   MADEVNRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLAEDTNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLE KSVLMNEQEQK KDSE  I SL SSKEYLEKQ+AEVENNLRELLQQDPGIA
Sbjct: 61  IGRTFVLESKSVLMNEQEQKFKDSETAIASLQSSKEYLEKQMAEVENNLRELLQQDPGIA 120

Query: 121 RQIMSMSVA 129
           RQIMSMSVA
Sbjct: 121 RQIMSMSVA 129

[Close]

BLAST of Cp4.1LG11g06640 vs. TAIR 10
Match: AT2G07340.1 (PREFOLDIN 1 )

HSP 1 Score: 192.2 bits (487), Expect = 2.6e-49
Identity = 99/128 (77.34%), Postives = 115/128 (89.84%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+A RA F+EIQ  MIE+TGKLKQVQ Q+RNKEG++KRAFLTLEEL+ L ++TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IGRTFVLEPK+VL  EQEQKLKDSEA + SL +SKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGRTFVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 128

[Close]

BLAST of Cp4.1LG11g06640 vs. TAIR 10
Match: AT2G07340.2 (PREFOLDIN 1 )

HSP 1 Score: 184.5 bits (467), Expect = 5.4e-47
Identity = 97/128 (75.78%), Postives = 114/128 (89.06%), Query Frame = 0


Query: 1   MADDANRATFLEIQGRMIEITGKLKQVQTQIRNKEGEKKRAFLTLEELKQLSDDTNAYKS 60
           MAD+A RA F+EIQ  MIE+TGKLKQVQ Q+RNKEG++KRAFLTLEEL+ L ++TN YKS
Sbjct: 1   MADEATRAAFMEIQASMIELTGKLKQVQNQMRNKEGDRKRAFLTLEELRPLPEETNTYKS 60

Query: 61  IGRTFVLEPKSVLMNEQEQKLKDSEATIDSLHSSKEYLEKQLAEVENNLRELLQQDPGIA 120
           IG+ FVLEPK+VL  EQEQKLKDSEA + SL +SKEYLEKQ+AEVENNLRELLQQ+PGIA
Sbjct: 61  IGK-FVLEPKTVLEGEQEQKLKDSEAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIA 120

Query: 121 RQIMSMSV 129
           +QIMSMS+
Sbjct: 121 QQIMSMSM 127

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g06640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3SZE2	5.0e-13	37.38	Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1	[more]
Q9CWM4	6.5e-13	37.38	Prefoldin subunit 1 OS=Mus musculus OX=10090 GN=Pfdn1 PE=1 SV=1	[more]
Q5RAM7	6.5e-13	37.38	Prefoldin subunit 1 OS=Pongo abelii OX=9601 GN=PFDN1 PE=2 SV=1	[more]
O60925	2.5e-12	36.45	Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2	[more]
Q54JS0	3.9e-10	26.36	Probable prefoldin subunit 1 OS=Dictyostelium discoideum OX=44689 GN=pfdn1 PE=3 ...	[more]

BLAST of Cp4.1LG11g06640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546624.1	1.17e-79	100.00	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022929581.1	2.27e-77	97.67	prefoldin subunit 1-like [Cucurbita moschata]	[more]
XP_022149806.1	2.45e-72	91.47	prefoldin subunit 1 [Momordica charantia]	[more]
XP_023536940.1	4.94e-72	93.02	prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6586128.1	2.01e-71	92.25	Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG11g06640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ENI7	1.10e-77	97.67	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436124 PE=3 SV=1	[more]
A0A6J1D9I1	1.18e-72	91.47	prefoldin subunit 1 OS=Momordica charantia OX=3673 GN=LOC111018150 PE=3 SV=1	[more]
A0A6J1HND5	1.96e-71	91.47	prefoldin subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111465792 PE=3 SV=1	[more]
A0A6J1FB94	8.00e-71	90.70	prefoldin subunit 1-like OS=Cucurbita moschata OX=3662 GN=LOC111444061 PE=3 SV=1	[more]
A0A0A0LJF7	1.14e-70	89.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070850 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g06640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07340.1	2.6e-49	77.34	PREFOLDIN 1	[more]
AT2G07340.2	5.4e-47	75.78	PREFOLDIN 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 31..51
None	No IPR available	COILS	Coil	Coil	coord: 74..115
None	No IPR available	PANTHER	PTHR20903	PREFOLDIN SUBUNIT 1-RELATED	coord: 1..123
None	No IPR available	PANTHER	PTHR20903:SF0	PREFOLDIN SUBUNIT 1	coord: 1..123
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 10..114
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 13..115 e-value: 1.3E-20 score: 73.3
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 8..117 e-value: 2.5E-17 score: 64.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g06640.1	Cp4.1LG11g06640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0044183	protein folding chaperone
molecular_function	GO:0051082	unfolded protein binding