Cp4.1LG11g06570 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGATAGCAGCGGTAGAGGCGGTGGCGAGGATCTTGAATGGAACGCGGAGGATTGGAAATGGGCGGCTCTGCAATCGCAATCGTTCAATCAGAATGAACTGGATGAGACGCGGAGGAAGAAGAACAAATACTGTGATATAGGCTGCGTAATCGGGTCGAAGAAGGCTAAAAAATGGAGATTGTTTTCAATTGTGATTGCGTTCTGCGTGATTGGATTGCCGATGATTGAGGCGAAGCGTCATGGTCGTTCTCCTCCGCCTGATCAATATTCAGACGCTCTTCATAAGACTCTCTTGTTCTTCGATGCTCAGAAATGTAAGTTCTTCATCTTTAATTTCGTAGAACATTTCCCTATTAAATAA ATGATTGATAGCAGCGGTAGAGGCGGTGGCGAGGATCTTGAATGGAACGCGGAGGATTGGAAATGGGCGGCTCTGCAATCGCAATCGTTCAATCAGAATGAACTGGATGAGACGCGGAGGAAGAAGAACAAATACTGTGATATAGGCTGCGTAATCGGGTCGAAGAAGGCTAAAAAATGGAGATTGTTTTCAATTGTGATTGCGTTCTGCGTGATTGGATTGCCGATGATTGAGGCGAAGCGTCATGGTCGTTCTCCTCCGCCTGATCAATATTCAGACGCTCTTCATAAGACTCTCTTGTTCTTCGATGCTCAGAAATGTAAGTTCTTCATCTTTAATTTCGTAGAACATTTCCCTATTAAATAA ATGATTGATAGCAGCGGTAGAGGCGGTGGCGAGGATCTTGAATGGAACGCGGAGGATTGGAAATGGGCGGCTCTGCAATCGCAATCGTTCAATCAGAATGAACTGGATGAGACGCGGAGGAAGAAGAACAAATACTGTGATATAGGCTGCGTAATCGGGTCGAAGAAGGCTAAAAAATGGAGATTGTTTTCAATTGTGATTGCGTTCTGCGTGATTGGATTGCCGATGATTGAGGCGAAGCGTCATGGTCGTTCTCCTCCGCCTGATCAATATTCAGACGCTCTTCATAAGACTCTCTTGTTCTTCGATGCTCAGAAATGTAAGTTCTTCATCTTTAATTTCGTAGAACATTTCCCTATTAAATAA MIDSSGRGGGEDLEWNAEDWKWAALQSQSFNQNELDETRRKKNKYCDIGCVIGSKKAKKWRLFSIVIAFCVIGLPMIEAKRHGRSPPPDQYSDALHKTLLFFDAQKCKFFIFNFVEHFPIK Homology
BLAST of Cp4.1LG11g06570 vs. ExPASy Swiss-Prot
Match: Q7XUK4 (Endoglucanase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU3 PE=2 SV=2) HSP 1 Score: 85.9 bits (211), Expect = 3.5e-16 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy Swiss-Prot
Match: O04478 (Endoglucanase 7 OS=Arabidopsis thaliana OX=3702 GN=KOR2 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13 Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy Swiss-Prot
Match: Q38890 (Endoglucanase 25 OS=Arabidopsis thaliana OX=3702 GN=KOR PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy Swiss-Prot
Match: Q84R49 (Endoglucanase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU2 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09 Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy Swiss-Prot
Match: P0C1U4 (Endoglucanase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=GLU1 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.0e-08 Identity = 30/71 (42.25%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. NCBI nr
Match: XP_038890396.1 (endoglucanase 7 [Benincasa hispida]) HSP 1 Score: 131 bits (329), Expect = 1.07e-32 Identity = 75/119 (63.03%), Postives = 85/119 (71.43%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. NCBI nr
Match: XP_023545601.1 (endoglucanase 7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 128 bits (322), Expect = 9.58e-32 Identity = 70/119 (58.82%), Postives = 83/119 (69.75%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. NCBI nr
Match: XP_004152840.1 (endoglucanase 7 [Cucumis sativus] >KGN61236.1 hypothetical protein Csa_006290 [Cucumis sativus]) HSP 1 Score: 126 bits (317), Expect = 4.81e-31 Identity = 74/122 (60.66%), Postives = 88/122 (72.13%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. NCBI nr
Match: XP_008441913.1 (PREDICTED: endoglucanase 7 [Cucumis melo] >KAA0047683.1 endoglucanase 7 [Cucumis melo var. makuwa] >TYK08339.1 endoglucanase 7 [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (316), Expect = 6.63e-31 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. NCBI nr
Match: XP_022929660.1 (endoglucanase 7-like [Cucurbita moschata]) HSP 1 Score: 125 bits (315), Expect = 8.91e-31 Identity = 70/119 (58.82%), Postives = 81/119 (68.07%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy TrEMBL
Match: A0A0A0LMM7 (Endoglucanase OS=Cucumis sativus OX=3659 GN=Csa_2G072990 PE=3 SV=1) HSP 1 Score: 126 bits (317), Expect = 2.33e-31 Identity = 74/122 (60.66%), Postives = 88/122 (72.13%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy TrEMBL
Match: A0A5D3CDB9 (Endoglucanase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G001390 PE=3 SV=1) HSP 1 Score: 126 bits (316), Expect = 3.21e-31 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy TrEMBL
Match: A0A1S3B4I7 (Endoglucanase OS=Cucumis melo OX=3656 GN=LOC103485910 PE=3 SV=1) HSP 1 Score: 126 bits (316), Expect = 3.21e-31 Identity = 72/122 (59.02%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy TrEMBL
Match: A0A6J1EUZ6 (Endoglucanase OS=Cucurbita moschata OX=3662 GN=LOC111436175 PE=3 SV=1) HSP 1 Score: 125 bits (315), Expect = 4.31e-31 Identity = 70/119 (58.82%), Postives = 81/119 (68.07%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. ExPASy TrEMBL
Match: A0A6J1K645 (Endoglucanase OS=Cucurbita maxima OX=3661 GN=LOC111492020 PE=3 SV=1) HSP 1 Score: 122 bits (306), Expect = 7.51e-30 Identity = 68/119 (57.14%), Postives = 81/119 (68.07%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. TAIR 10
Match: AT1G65610.1 (Six-hairpin glycosidases superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 1.9e-14 Identity = 46/107 (42.99%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. TAIR 10
Match: AT5G49720.1 (glycosyl hydrolase 9A1 ) HSP 1 Score: 67.4 bits (163), Expect = 9.0e-12 Identity = 41/113 (36.28%), Postives = 62/113 (54.87%), Query Frame = 0
BLAST of Cp4.1LG11g06570 vs. TAIR 10
Match: AT4G24260.1 (glycosyl hydrolase 9A3 ) HSP 1 Score: 58.5 bits (140), Expect = 4.2e-09 Identity = 32/85 (37.65%), Postives = 46/85 (54.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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