Cp4.1LG11g06380 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAGCTCCAAAGTTCGTTGTACTTTTCTTTTAAATTTCTTCACCGCTCCGCCATGGATCTATCCCACCTGATCCGTCCTTCTTCCAACTCCTCCTCCTCCTCCTCCTTCAACGTTCCAACAATGGCAGCAACCAAAACAGACTTTGATCTCAGTGTAAGATCCCTTACGAGCTCTCACACTGCAATACACCGGTTCATTGCTTTTCGTTTTTCTCTGACACTGTTTTGGTTTCTCTGTCTTTTGTTTCTTTCTTTGCAGCCATCTCCGCAGTCTATCTACTCGGTCGGGTCAGTTTCCTCTGCATTTTAGGGCTGTCACTCCTGTTTTTGTTGTTGCCGAGCTTTGTCTGTCTACATTTGCATTTTTTGTATGGTAGCTGGTGTGGCGAGTGTATAGGCGAAATGTGTTGATGCTTTGAGGTTTTGTGTGTTTTCAGTGACTATACATTTGCGGATGTCACTAACTTGGACCATTGCGCTAAGTATTTGAACCAGACGCTTATCACATTTGGATTTCCGGCTTCGCTCGATCTTTTCTCGAATGATCCGGTTGGTTTTTTACCTTTTAGTCAATAAGCTGGTTTCTTCCTTTCTTTTTAATATACATATGCATATATAATTTTATTTTGTTTGCTTATGGAAAATGTTCGAAGTTTGATATGTCTACTGAAATATGTAGGTGTCTATCGCGAGGACGTGCAATTGTATATATTTCCTGCTTCAACAGAGGCAGCGTGACATTGACTTTAGGGAATCTGCTAATGAACAGAGACAAAGGTAACGGCATTTTTTAGGATTGATTGATGATATGGCGCCTGACATCACCGAATGCATCAATTGTGAATTAATTTATACGACTGTGCTAAGACATTCTTCAAAAGATGTTCTGTTTGGTTATGGTATCGATGTTTATCTTTTTTTATTTATTTATTTATTTATTTATTTTATTTTTTATGTTCATAACGGAAACGATTTCATTAATAATTGAAATTGAATCATCAGCCTTCAAATCAAAGGAGTTACAAAAGATTCCTCCAATTGTCACATTTCAGAGATTGCTCATAATTACCGAAAGGTTTACCTAGCAAAACCCTAGAAGAGAAAGTTGAACTACAATACTCTTTAACAGTCAACACGTCTCTTACTTTATCAAGTCATTTGAAGTGCTCTAGAAAACTTTCTATGTGTGCAAATGTAAATCTTTTTTCCTGGATTTGAAGTGCTCAGCTCTTCATTGTTCTATATTTTGGAAGATATTCACACCTTTGCATCTAATCTATAGCTTGACTTTGTTCTTAAATTTTGATGATATTTCTGTTCATTTATATGATGGAATGACTTATTCTAGTTCACATCATGTCTCCTTGAAATACTATCATGTCAATTTATCTTTCTATTTGTCCACATTTCCCTTTATTTTCTTGTGGTAGACTACTTTTAGACATATCAAGATTGGAGACTAAAGTTGAGAGGCTGGAGTCAGTAATACAAGCTAAAGATAGGGAGATTGCAACAATTACACGAACAGTACAATCTCAAGACTTCTCTAAATTCTATAATTTCTCTATCTTATTTGTATTGAACAAGGAAATATTTTCCCATTAGGAAGCCAAAGCTAAGGCAGCTTTCAAAGCCCAAATTGATAAGCTTCAGCAGGAAAAGGATGAGTTTCAAAGAATGGTTATTGGCAATCAGGTTAGGGTAGTTGGATGCTGCGTGATAGATAATTGTTTCTATGTGATAATGTAAGTGTTGATGATGAAATATACTTTCTGTTTATGTGACCAAAGCAAGTAAGAACTCAACAAATGCATGAGATGAAGAAGAAAGAAAAGGAGTATATCAAATTGCAGGTGGGATATCTTTGAGATGTTTTTCAGCCCTAGAGTAGAGTCCAACTCTGTTGGAGAAGATCAATATTTACAAAGAGATGCTGTTGTATATCTGCAGGAAAGGCTAAACCAAGTTTTAATGGAGAAAAAGAAAGAATCTAGATCAGGAATGGAGATAATGAATTTGCTACAGGTATATTGTAACCATTTTAATGTTGTATAGATAATGGATCATTCCAGTCATTTAATGGCTTTTATGATATGAGCAGAAAGAAGGGCGACAACGTGGAACTTGGAATGGCAAGAAGACTGATAATGATTTCTATAAAAAGATAGTATGTGAACAAGTTACTTATAAAAATATTTGTGAGTGAGTACTCTTCAGTGATTTTTGGTGGTTAAAATATTCTTGCAAATATTCCGCGGTCAGGTGGATACTTATGAAGTAAAAAATCAAGAATTGATGTCGGAGAATGCTGATTTGAAGGCATTGTTGCGATCAATGCAGGTTTGCAACCATTTTATAACTATCTGCACTATTAGTTTACTGAAATTGTTGTCCTATAAATTTCTGAATGGTGAGCATGCAATAAAATTAGGTCTCTGAATACGTCTACAATCTGTTATGGTGGATTCTGTGATACCGAGGTTTTCTGTCATTCTTTTATTAAATTATTTTTAATTTTTAATTTTGAAGTTCATTATTTTATTGGTTTATTTCATTATTTTGTGAAAGTATTTCTCTCTTATATTGTAAATATTAATTTATTGTTGGATTTTATTTTTTCAGAGCTCTAACTTTTAAGTTGGAGTTTCGGAAGTAATTTTCTTATTTATTAGCTTTTACAATGGTTGTGCCGATTGTCTACAAGAGTGTTGATTTGTTCCAAAGAGCTCCAATAGTTCACCAAGTAGGGATTTTCTCCTTCCGAACTTCATTAGTTTAATTATACGATGTTTGAACCTGTTCTTTATGATTATGATAGTCGTTTGTGTGTGTGCTCCACTTACTTCTCAACAAGTTGGATTTCCTTTCACCTTCTCATTAAAAGTGGTCTGTGACTTGTTTCTTGAATCCTTGAATTGTTGATCTACATCTCTTTAGTAGCTTAAACTCATATATAGTCTGTTTTGTTGTAAGCGTTTGAGTTATGCGTTTGTGACTCTCATCTGTACTTATGACATCTATGCGGTTTGCAGGTTGATATGAGGGATTTCCTAAATGCTCCAAATGGACTGCCTAAGCAACCCCTTGCAGTTAATGAAAGAGTTGAAAGTGAAGGTGCACGGTTTTCCTTTGGTGGGAGGACGGTATGGACCAAACTATTCTCATGTGGTCACCCGATTGATACATTGGTAACATGACTTATTATTTTTATTTTTTTTGCAGGATGTTTTTGACCTTCCGTTTCATATGGCTAGAGATAAGATTGAAGAGAGCCTTCGGAATAAGATGGCTTCTATAAAGGTGAATTGTTTTTCATACTACATCACTTTCTTCTAGACAGAGATGGATATTTATTACTGATAGTATCTTGAAATTTGAAGGAGCGGATGGGTGAGCTGCAAGATGCTCAGAAAGAATCTGAAGTTACTTCTGAAGCTACCGAGAGGGAATTTGAGTTAGAAGCACAACTTGTAGAGGCAAGGAGCATAATCCAGGAGCAGGTACTCTACTTTTCTTGCTCAGCCAATTAAAATCTGTGTCATATCTTCAATTTCAACGAGCTTCTCTTATCTCAAGTTTCCAATTTGCTCAGCAAGTCAAACTACAGGGTTGGGTCTAAAATGTCCCTAAACCCAATCCACTAACACCCCTAGACCTAACTACTTAAAGATTGGCTGGGCTGCTGGGTTTAAAAATAATATGGGTTGCCAGTGCTGGGTTTAACAATATGAAATAATATGGCCACTGGGCCCGCTCAGTTCAATTCAAAATTTCAGGCCCTCAACCTAAGAACCGAGCCAACCTACTCGGAGGAAAAAAAAAAAAAAAAAACTCAACCCAAACCATATTATTTTTAAACCAACCCAAACCAAGTGGGCTAGGTTGAGTTGCTCAGTTTTTCGAGTCTTCGGTTTGTCTAAACACCCCTAGTGAAAGCATTCTATTTTTTATTTTTTATTTTTAATTTTATGAGAGCTTTCAAATTATGTAAATCAGTGCAATTTGTGAGTGGTCCTTTGGATCTATAGTTCTGACACATTGAAAGCACGAATCTCTCTGAATTTGGTGTGCTCGTGAAGTTTCTACCCGTTTGGAAATACAAGAAATTCTTTTGCATGGTATTTAGATTGGAGTTTCCTCTGATTAAATTTATGTCTTAGACACAATGTTTGGACTTTCTTCTTCTTCTGCCTAATTTGGGCTATGCCATATATTTTTCTTCTATCGATCTGATCAAACCAAAATATTTGTGATCTTTTTCGAGAAGCTTAAGTTTATATTAATTAATAACTGTACAAATTGGCTTGTATTTCAGGCATCAATTATGTCTAAACATGCCAAATCTGAGAGGCCAAGGTATTAATGCATTTCCTTACACATCTTAATGTAGTTTGGGTTTAAATTGATATACCACCAACATCTTTTCAGGAGTCTTAAGGGCCCTTTTGATTCTGGCTGAGAATCCATCATTACAGGTATCATTCAGATTCTTGTCAACCAGACACTTTTTTGTCGTTTGTTCTTCAAATTTTAATCATAACTAGCATTTGATTTTATTGTGTGTCATTATGTGTTCGTGTATATATAAAAGAAACAGGGTACCGTTTTGTTGAACTTATGAAATGCTCATGCAAAAAGCCAAAGGGGTTTCAGTAGATGCCTTCATTTGGCACTAATAGATGAAAGATGATAGTTATAAAAGAATATGTAAGGAGCTCCAAGAAGAAGTAAAGAAAACCGACCTCCCACAAAATCTTAAAACATCTATGATCCCATTTGAGTATTTTATTTTTTTCTCTCTCAACATATTTTTCATGGTAATACTTTACTAGTTACAATCATTAAGAAATCAACCATCTGTCTAGCCCTTGCCCTTCCCATCCAAACATGCTAAACAAGTTTTTTGTGGAGTTGTAACTCCAGAATCACCATTAACGAGTCATGTGATAGTATGGGCTGTGGTGATTTTGGAATTTTTCAATGCTTCTTCAATAGGTGACTACTATATTATATGTTAGCTCTCAAGTAGTTAAGATAACCGGGACAAAGCCAAATCTCTTTGGTTAACTTCTCTCTTTGTTTGTGCCCGTTGGCAGTCCTTTTTAGAACTTACTCTCTTGTGGTGGGTTTTTTCCCCCTTCATAGTGCGAGCGGTCTGATGGTTTTTGTTACTGTGGTTAGTTTCATGTCTACGCATATATTGTAAAAGTGCTTTGAGAATGCAATGAACTTGTTTTATCATCCCTTGTGTTTTAGTATTCCAAGACGTGGGGATGTTTTTCCCTGATGTAATTCTAGTTTTCAAAATATGGTTAATGCCGTTAATACCATCATTTTAATCATATTAATGGCTTACTTGTATATCTTAGGCTAAATTATACAAATTACCATTGGATTTTGAAAAGTTCTATTTTTACCTTCGGACTTTGAATATGCTCCCAAAAAATACCATTGTAGAGTTTTTTATTTTTATTTTTTTATAATGAGAATGAAATTCATGTAATTATGACATGCATTCATAACATTATTGAGATAACTGTTGATGTGTAAAAATTGATTATGCAAATAATGTTAACGATATCTTTTCATCTTTTGGGGTGAAATGAATGGTAAACATGTTTTTATTCTTCTATATAGTTGTAAATAATGTTACGTATATCTTCTAATTTCTACACATACTTGTCACATCTATTTCTGTCCTTTATTTTATCAGAAAATGTAAAGTCTCAGGGCATAATTGAATTATACTCCTTAGATGGGTAGAGGGATGTTTTGTTTAATTTAACCAATTGTATAGATGTTGTCTTATCTGCTTTCATTTGTAATTCTTTTGTCTACCTTAGACCTCTCACAGTGTTCAATTTTCATTTTTGCTTGCATAACTGGTCTCGTTCTTTCTGGGCACATGTGCAGGCAATAGAAGACAAACAAGCTCAGTGGCTGTAGAGTATTATAGAGTTGAGTGGCCGCATGGACAAGAAAACGGTAAAACGTCCTTTGTACAGCAATTCTTAACCAGGTGATTCAGTAGACCTGTTCTACTTGTTTGATACACACACTAAAGGCATGTATAACTCTAACCTTCATTACTAGTATAATTAGTTTATAACCTTCTCCCTCTAAATTATTGATGCCATTGCTTGCTACTTCCATTTATATTAATTTTTGCTTTGATTTCTTAAATTTTATAGGACACAAACCATAAAACTTTTAGATAGGATGCCTAGAAATGAGGATGAAGAACTAAGGGTATGTTTGGAAAGTGTGATTTTGAAAGGGTTAAAATTACTTTTGTCATGTTGAAATTGTGAAATCACTCTCAAATGTACCTTTATACATTCAAGATCAATTTGACATTTGGTTTTACACTTCTTAACACGATTTTCATACAAACATAATTGATTTTGCATATTCCTAAAGTGATATTAACCATTCCAAAATTATCCCAGTCATATTTTCAGTGCATTAGATTTTTCCATAAACAACCTCAAGCATAGATAGAAGTTGAATGAAGATATATTCTTCCGAACCAATTAAGATTGCTGCTAGGGATGGCACAATTTCTTCTTGGGACTTTGGGTGTGGGATTATGGCCCTATCTTTGAGTTCAAATTGTAATTTTGTTTCTTGGCCTATATATTTTCAACCTTTTGTTTGAATGTTTGAACTTTACATTTGAATTCTCTCGTCTTTAACTATTTATATAAAAATAATGCTCAAGTTTCCACAAGTCATTGCAAATCTTTCTCGCAAAACTTTGATGTTGATATCTTGGCGTATTTCCAGGAGAAACACATTCTGGGGAAACTCAAACTTAGATTGAGTTTCTAAGCTTCTTTGAAGGGGGCCGTGAAAGAAGGTTGATAGTTTAAACTTTATGTTTTAATTTGAAGGGTTCCCAATATAATACCAAAAAGAATGGGGTTGCTTTGCTTTGCTTTTTACGTCATTTTCTTCCCTTTCCTCTTGCCCTTTCAAATTATTGTTTCTTATATCTCTTTGTAAATTAATCATGTTCAAACTCTTCAAAAGTCAACTCGAGAAGGTCAAATCATTAAAACGTGCCCATTTTGGTGGCCGACCCGACATTATTTCAAGGCTTTAGGGTATGGGGAGAAG TCCAGCTCCAAAGTTCGTTGTACTTTTCTTTTAAATTTCTTCACCGCTCCGCCATGGATCTATCCCACCTGATCCGTCCTTCTTCCAACTCCTCCTCCTCCTCCTCCTTCAACGTTCCAACAATGGCAGCAACCAAAACAGACTTTGATCTCAGTCCATCTCCGCAGTCTATCTACTCGGTCGGTGACTATACATTTGCGGATGTCACTAACTTGGACCATTGCGCTAAGTATTTGAACCAGACGCTTATCACATTTGGATTTCCGGCTTCGCTCGATCTTTTCTCGAATGATCCGGTGTCTATCGCGAGGACGTGCAATTGTATATATTTCCTGCTTCAACAGAGGCAGCGTGACATTGACTTTAGGGAATCTGCTAATGAACAGAGACAAAGACTACTTTTAGACATATCAAGATTGGAGACTAAAGTTGAGAGGCTGGAGTCAGTAATACAAGCTAAAGATAGGGAGATTGCAACAATTACACGAACAGAAGCCAAAGCTAAGGCAGCTTTCAAAGCCCAAATTGATAAGCTTCAGCAGGAAAAGGATGAGTTTCAAAGAATGGTTATTGGCAATCAGGAAAGGCTAAACCAAGTTTTAATGGAGAAAAAGAAAGAATCTAGATCAGGAATGGAGATAATGAATTTGCTACAGAAAGAAGGGCGACAACGTGGAACTTGGAATGGCAAGAAGACTGATAATGATTTCTATAAAAAGATAGTGGATACTTATGAAGTAAAAAATCAAGAATTGATGTCGGAGAATGCTGATTTGAAGGCATTGTTGCGATCAATGCAGGTTGATATGAGGGATTTCCTAAATGCTCCAAATGGACTGCCTAAGCAACCCCTTGCAGTTAATGAAAGAGTTGAAAGTGAAGGTGCACGGTTTTCCTTTGGTGGGAGGACGGATGTTTTTGACCTTCCGTTTCATATGGCTAGAGATAAGATTGAAGAGAGCCTTCGGAATAAGATGGCTTCTATAAAGGAGCGGATGGGTGAGCTGCAAGATGCTCAGAAAGAATCTGAAGTTACTTCTGAAGCTACCGAGAGGGAATTTGAGTTAGAAGCACAACTTGTAGAGGCAAGGAGCATAATCCAGGAGCAGTGCAATTTGCATCAATTATGTCTAAACATGCCAAATCTGAGAGGCCAAGGAGTCTTAAGGGCCCTTTTGATTCTGGCTGAGAATCCATCATTACAGCCCTTGCCCTTCCCATCCAAACATGCTAAACAAGTTTTTTGTGGAGTTGTAACTCCAGAATCACCATTAACGAGTCATGTGATAGTATGGGCTGTGGTGATTTTGGAATTTTTCAATGCTTCTTCAATAGGCAATAGAAGACAAACAAGCTCAGTGGCTGTAGAGTATTATAGAGTTGAGTGGCCGCATGGACAAGAAAACGGTAAAACGTCCTTTGTACAGCAATTCTTAACCAGGTGATTCAGTAGACCTGTTCTACTTGTTTGATACACACACTAAAGGCATGTATAACTCTAACCTTCATTACTAGTATAATTAGTTTATAACCTTCTCCCTCTAAATTATTGATGCCATTGCTTGCTACTTCCATTTATATTAATTTTTGCTTTGATTTCTTAAATTTTATAGGACACAAACCATAAAACTTTTAGATAGGATGCCTAGAAATGAGGATGAAGAACTAAGGGTATGTTTGGAAAGTGTGATTTTGAAAGGGTTAAAATTACTTTTGTCATGTTGAAATTGTGAAATCACTCTCAAATGTACCTTTATACATTCAAGATCAATTTGACATTTGGTTTTACACTTCTTAACACGATTTTCATACAAACATAATTGATTTTGCATATTCCTAAAGTGATATTAACCATTCCAAAATTATCCCAGTCATATTTTCAGTGCATTAGATTTTTCCATAAACAACCTCAAGCATAGATAGAAGTTGAATGAAGATATATTCTTCCGAACCAATTAAGATTGCTGCTAGGGATGGCACAATTTCTTCTTGGGACTTTGGGTGTGGGATTATGGCCCTATCTTTGAGTTCAAATTGTAATTTTGTTTCTTGGCCTATATATTTTCAACCTTTTGTTTGAATGTTTGAACTTTACATTTGAATTCTCTCGTCTTTAACTATTTATATAAAAATAATGCTCAAGTTTCCACAAGTCATTGCAAATCTTTCTCGCAAAACTTTGATGTTGATATCTTGGCGTATTTCCAGGAGAAACACATTCTGGGGAAACTCAAACTTAGATTGAGTTTCTAAGCTTCTTTGAAGGGGGCCGTGAAAGAAGGTTGATAGTTTAAACTTTATGTTTTAATTTGAAGGGTTCCCAATATAATACCAAAAAGAATGGGGTTGCTTTGCTTTGCTTTTTACGTCATTTTCTTCCCTTTCCTCTTGCCCTTTCAAATTATTGTTTCTTATATCTCTTTGTAAATTAATCATGTTCAAACTCTTCAAAAGTCAACTCGAGAAGGTCAAATCATTAAAACGTGCCCATTTTGGTGGCCGACCCGACATTATTTCAAGGCTTTAGGGTATGGGGAGAAG ATGGATCTATCCCACCTGATCCGTCCTTCTTCCAACTCCTCCTCCTCCTCCTCCTTCAACGTTCCAACAATGGCAGCAACCAAAACAGACTTTGATCTCAGTCCATCTCCGCAGTCTATCTACTCGGTCGGTGACTATACATTTGCGGATGTCACTAACTTGGACCATTGCGCTAAGTATTTGAACCAGACGCTTATCACATTTGGATTTCCGGCTTCGCTCGATCTTTTCTCGAATGATCCGGTGTCTATCGCGAGGACGTGCAATTGTATATATTTCCTGCTTCAACAGAGGCAGCGTGACATTGACTTTAGGGAATCTGCTAATGAACAGAGACAAAGACTACTTTTAGACATATCAAGATTGGAGACTAAAGTTGAGAGGCTGGAGTCAGTAATACAAGCTAAAGATAGGGAGATTGCAACAATTACACGAACAGAAGCCAAAGCTAAGGCAGCTTTCAAAGCCCAAATTGATAAGCTTCAGCAGGAAAAGGATGAGTTTCAAAGAATGGTTATTGGCAATCAGGAAAGGCTAAACCAAGTTTTAATGGAGAAAAAGAAAGAATCTAGATCAGGAATGGAGATAATGAATTTGCTACAGAAAGAAGGGCGACAACGTGGAACTTGGAATGGCAAGAAGACTGATAATGATTTCTATAAAAAGATAGTGGATACTTATGAAGTAAAAAATCAAGAATTGATGTCGGAGAATGCTGATTTGAAGGCATTGTTGCGATCAATGCAGGTTGATATGAGGGATTTCCTAAATGCTCCAAATGGACTGCCTAAGCAACCCCTTGCAGTTAATGAAAGAGTTGAAAGTGAAGGTGCACGGTTTTCCTTTGGTGGGAGGACGGATGTTTTTGACCTTCCGTTTCATATGGCTAGAGATAAGATTGAAGAGAGCCTTCGGAATAAGATGGCTTCTATAAAGGAGCGGATGGGTGAGCTGCAAGATGCTCAGAAAGAATCTGAAGTTACTTCTGAAGCTACCGAGAGGGAATTTGAGTTAGAAGCACAACTTGTAGAGGCAAGGAGCATAATCCAGGAGCAGTGCAATTTGCATCAATTATGTCTAAACATGCCAAATCTGAGAGGCCAAGGAGTCTTAAGGGCCCTTTTGATTCTGGCTGAGAATCCATCATTACAGCCCTTGCCCTTCCCATCCAAACATGCTAAACAAGTTTTTTGTGGAGTTGTAACTCCAGAATCACCATTAACGAGTCATGTGATAGTATGGGCTGTGGTGATTTTGGAATTTTTCAATGCTTCTTCAATAGGCAATAGAAGACAAACAAGCTCAGTGGCTGTAGAGTATTATAGAGTTGAGTGGCCGCATGGACAAGAAAACGGTAAAACGTCCTTTGTACAGCAATTCTTAACCAGGTGA MDLSHLIRPSSNSSSSSSFNVPTMAATKTDFDLSPSPQSIYSVGDYTFADVTNLDHCAKYLNQTLITFGFPASLDLFSNDPVSIARTCNCIYFLLQQRQRDIDFRESANEQRQRLLLDISRLETKVERLESVIQAKDREIATITRTEAKAKAAFKAQIDKLQQEKDEFQRMVIGNQERLNQVLMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKTDNDFYKKIVDTYEVKNQELMSENADLKALLRSMQVDMRDFLNAPNGLPKQPLAVNERVESEGARFSFGGRTDVFDLPFHMARDKIEESLRNKMASIKERMGELQDAQKESEVTSEATEREFELEAQLVEARSIIQEQCNLHQLCLNMPNLRGQGVLRALLILAENPSLQPLPFPSKHAKQVFCGVVTPESPLTSHVIVWAVVILEFFNASSIGNRRQTSSVAVEYYRVEWPHGQENGKTSFVQQFLTR Homology
BLAST of Cp4.1LG11g06380 vs. ExPASy Swiss-Prot
Match: Q9Y2D8 (Afadin- and alpha-actinin-binding protein OS=Homo sapiens OX=9606 GN=SSX2IP PE=1 SV=3) HSP 1 Score: 88.6 bits (218), Expect = 2.0e-16 Identity = 87/369 (23.58%), Postives = 177/369 (47.97%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy Swiss-Prot
Match: Q8VC66 (Afadin- and alpha-actinin-binding protein OS=Mus musculus OX=10090 GN=Ssx2ip PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 7.7e-16 Identity = 85/371 (22.91%), Postives = 179/371 (48.25%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy Swiss-Prot
Match: Q8CGZ2 (Afadin- and alpha-actinin-binding protein OS=Rattus norvegicus OX=10116 GN=Ssx2ip PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 8.6e-15 Identity = 88/392 (22.45%), Postives = 186/392 (47.45%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy Swiss-Prot
Match: Q6NRK1 (Afadin- and alpha-actinin-binding protein A OS=Xenopus laevis OX=8355 GN=ssx2ip-a PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.9e-14 Identity = 90/379 (23.75%), Postives = 177/379 (46.70%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy Swiss-Prot
Match: Q6NRX3 (Afadin- and alpha-actinin-binding protein B OS=Xenopus laevis OX=8355 GN=ssx2ip-b PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.9e-14 Identity = 79/371 (21.29%), Postives = 171/371 (46.09%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. NCBI nr
Match: XP_023545625.1 (afadin- and alpha-actinin-binding protein-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 647 bits (1670), Expect = 8.86e-231 Identity = 352/376 (93.62%), Postives = 354/376 (94.15%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. NCBI nr
Match: KAG6598868.1 (Afadin- and alpha-actinin-binding protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 602 bits (1552), Expect = 3.41e-213 Identity = 326/353 (92.35%), Postives = 329/353 (93.20%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. NCBI nr
Match: KAG7029809.1 (Afadin- and alpha-actinin-binding protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 599 bits (1545), Expect = 5.72e-212 Identity = 325/353 (92.07%), Postives = 329/353 (93.20%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. NCBI nr
Match: XP_022997425.1 (afadin- and alpha-actinin-binding protein-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 598 bits (1541), Expect = 1.61e-211 Identity = 324/353 (91.78%), Postives = 328/353 (92.92%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. NCBI nr
Match: TYK01354.1 (afadin- and alpha-actinin-binding protein isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 594 bits (1532), Expect = 1.46e-209 Identity = 338/449 (75.28%), Postives = 354/449 (78.84%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy TrEMBL
Match: A0A6J1K9L3 (afadin- and alpha-actinin-binding protein-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492345 PE=3 SV=1) HSP 1 Score: 598 bits (1541), Expect = 7.79e-212 Identity = 324/353 (91.78%), Postives = 328/353 (92.92%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy TrEMBL
Match: A0A5D3BQA4 (Afadin-and alpha-actinin-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00400 PE=3 SV=1) HSP 1 Score: 594 bits (1532), Expect = 7.05e-210 Identity = 338/449 (75.28%), Postives = 354/449 (78.84%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy TrEMBL
Match: A0A5A7UPR0 (Afadin-and alpha-actinin-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00420 PE=3 SV=1) HSP 1 Score: 592 bits (1526), Expect = 5.97e-209 Identity = 338/450 (75.11%), Postives = 355/450 (78.89%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy TrEMBL
Match: A0A1S3BT77 (afadin- and alpha-actinin-binding protein isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492899 PE=3 SV=1) HSP 1 Score: 578 bits (1490), Expect = 6.65e-204 Identity = 312/353 (88.39%), Postives = 321/353 (90.93%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. ExPASy TrEMBL
Match: A0A1S3BT68 (afadin- and alpha-actinin-binding protein isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492899 PE=3 SV=1) HSP 1 Score: 578 bits (1490), Expect = 9.57e-204 Identity = 312/353 (88.39%), Postives = 321/353 (90.93%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. TAIR 10
Match: AT5G57410.1 (Afadin/alpha-actinin-binding protein ) HSP 1 Score: 451.4 bits (1160), Expect = 8.5e-127 Identity = 250/350 (71.43%), Postives = 279/350 (79.71%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. TAIR 10
Match: AT5G57410.3 (Afadin/alpha-actinin-binding protein ) HSP 1 Score: 451.4 bits (1160), Expect = 8.5e-127 Identity = 250/350 (71.43%), Postives = 279/350 (79.71%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. TAIR 10
Match: AT2G18876.1 (Afadin/alpha-actinin-binding protein ) HSP 1 Score: 427.6 bits (1098), Expect = 1.3e-119 Identity = 233/353 (66.01%), Postives = 276/353 (78.19%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. TAIR 10
Match: AT5G57410.2 (Afadin/alpha-actinin-binding protein ) HSP 1 Score: 409.8 bits (1052), Expect = 2.8e-114 Identity = 227/309 (73.46%), Postives = 252/309 (81.55%), Query Frame = 0
BLAST of Cp4.1LG11g06380 vs. TAIR 10
Match: AT2G18876.2 (Afadin/alpha-actinin-binding protein ) HSP 1 Score: 305.4 bits (781), Expect = 7.5e-83 Identity = 171/255 (67.06%), Postives = 198/255 (77.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|