Cp4.1LG11g06370 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g06370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionLysine--tRNA ligase
LocationCp4.1LG11: 4082879 .. 4090547 (-)
RNA-Seq ExpressionCp4.1LG11g06370
SyntenyCp4.1LG11g06370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTTATTATATTTTATTTTACTTTTTCCACTCTTTTTGAAATATTTTAGTTTCGTCTTCGTGGAAACCCTAAAATTGAAACAAACTTCCCAAGTTTGCTGTTAAAAATTCCCCTCGGCTGCGCCTTTGTCTTAGTCAATTCTCTCCTCCAGACCTTGCACTCCAAGGAATCAGTGTGCTTTATAACCTTCTGCCCTTTGGAGCTTTGACTATTCATTGTCTGAAAATGGCGGATTCTGTAGACGGAGCTGCGAAGGCTGTCTCTGAATTAGCATTGGGTTCCGCTTCTGCGGCTTTAGACATGGCCGACTCTGCTCCAAGTGCTGAAGAAACTATAAGCAAGAAGTGAGTGTTTTGTTGAATTTTTGTTCATTGGTGCGTTTTTTAGCTAACGTGTGGAAATGGATGTTAGAGTTAGCTTATTTGTAGCTGGGTTTAGTCTTAATGAATAGATTTTTCCTGAGGTTAAATTTGATTATGTCATTGCCATTTTTGTTCTTTTAGTTTTGTTATTAGTTGGGTAGTTTTTCGTCGAAATTACGATTTTGAAGTTGTAGAGTTTTAACATTGTAATGTTTTCAGTGCACGCAAGAAGGAATTAAAGATGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAATTGAAGGAGAAAGCAAAGCAGGTACTAGCAATCACAAATGGAACACCTATAGATTGAATTGTTTAGAATGCATTAATTAAGAATAGAGCAGGGTGAAATAATTATCCATTCTCGAATGAGAATATCAAATATGATACTTCTGATTAACAGTCAGTTTAATACCTATGCTTGTATGAAAGGAAATGAATTATAAATTCTGGTGGCCAGATTTCATGTTTTAATGTTATTCTTGACTACTACTACAGAAAGTTCTTTGCGACTGAAATGTATTTATGTACCAGGAAGCATCCCAGAATAAGAAATCTGTAGCGGTAGATGATGAAGAAATGGACCCCACGGTACAACTATTAAGTTCTTATTTTGACTTCTATTGCAGAACTTTTAGAATCGTTGTCATACTGATTTTTCTCCCCCAATTGGTTTGTGTTTGCAGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTGAAAACCCATATCCTCACAAGTTTCAGGTTTCAATGTCTCTCCTTGAGTATATTGAGAAATATGGAAGTTTAAACAATGGTGATCATCTTGAGGAAGTCATGGTTTCTCTTGCCGGTAACTAGAACCAAACTGATACCTTTTTTGTGATTCTTTTTGTTGATATCCCAATCATTTTCTCATTTCTCTTTCTTTTTTCTTCATTTAAGGGAGAATAATGAGCAAAAGGTCGTCCTCCTCGAAGTTGTTATTTTATGATCTCCATGGTTCTGGAGCTAAAATCCAAGTTATGGTGGATGCACGGTATGGAACTATTTTGTATTTCTCGCTACTTTAATTCTCTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCAATAATAAAATTTATCTTCCAAATGTTATTCAAATTTAATTCGCAATGTCAACTCTCATTCTAGCCAGTTCACCTTAAATGATGTCGGCTGACATGAGTTAGTTTAATTAGACTAATTTTTACACAAACTTTGTAAATTTTTAATGATCATCAATTTATTGGATACCATGCTATTGATATATATATTTTTATGTCGATTTGGTAATGAGCCATTTATTGGATATCATGCTTATAGTATATATATCTTTGTGTGTCAACTTGGTTATTAGCCATTTATTAGAGTAGAGATAATTGAGCATACCCACATTTATTTAAATCAGTAGTAACCTTTTTTTCCCTTTAAAATGCATGTGTTTTTCATTATACATATGTATACATACACACACATAAATATTCATGATTGTACATTATAATAAGAGAAAGTTATTTAAGTTCTTGGGAAATGAAATGACAAAACATCTGTATTTTAACGTTCTAGATTCCATACAAATTTAATTTTGTAGATCCTATCAAACCACCCAGTATGATCTATCTTTTATGAATTTGAAGTGCATGTGCACCAAAGTTGTTGTCAAGTCTTATTTTGTGCTTTTTATCCATTGACACCTACTTGGCTCCTATTTTTGTTCTTCAATTCAATACAAAGGTTATAATATTTCCACTTTAATGATGCAGTAACTCAGAGCTAGATGAAGCTGAGTTTGCAAGGTTTCATGGCGCTGTCAAGCGTGGCGATATTGTTGGTGTCACTGGGTTTCCAGGTTGGGCTGCAAGGATGGGCTTCACCTTTTTTTTTTTCCCACTAATAATTTCTCTATATTTTGCTGAAGTCTAGTTTATGATGTTTGTTCGTCAATTGTCTTTTTCCTTTTTAGTCCCTTATGTGTGCCATCATTATTTGAGAGAGAGAGAGATCCATGGCTTGACGTTTTCTTCCTTGAGCTTCTCATTTCTTTCTATTTCATTACTTTTATGAATACCGAAAATCTATTTTCTGGAGTAAGCTTAATATGTTCTATTCTTGCAGGAAAAACAAAGAGGGGAGAGCTCAGTATTTTTCCAAAATCATTTATTGTCCTTTCTCACTGTCTGCATATGATGCCAAGGCAGAAGGCGGCCCAAGGGTCTGAGAATGCAAATTTGAAGGTAAATGAACCTAGTTTTTATGTCTGGGTTATTTGGATGGCTTCTCATTGTGTTCTCATTTTTGGTTCAGAAAAATGACGCATGGGTCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAAGACCAGGTAACTATTCTATTTGTGTTGCGCACTTCCTTTTGTTTACTTACAGGAACATCTGTTTTGTTTTATCTTTTTCTATTTTTCTTGGGTGGAAAAGTTGCACTTTTATGATCGGTATTTTAAAAAAGCCCTCTCAGGCGAGCACAACACACGTCTATGCATGGGTCTGGTGCTAATAATAATTGTGCTTTCACCACATTCTAATCTCCATTTGATATTGCATTTCTGTCTCCATAGACGATATTCCCTTAGGATTAATTCTTGTAATTTGGATTTCAAAATTGATTTTCTAATGGAAGTCTTGGCTTGAAAGCTGCCGGCTTGACTATTAAACGTTCCAGGTTCAGATAGTAATTAACAAGCTTACTTTTAGTTTACAAACGGCTTGGGAATTTTCACATAAAAACTTGTATGCCCCTCATAAAAACTTTTGGTTTGTTTATTTATGTCTTCTTTGAACCCAAGGACACGTGTACAACCTATATAACACATCCTGTTCAAGTAAGTTAAAACACTTATTGATTATTCCACTCCCTCCAGAAACTTTATAAAAGGTCTACAAGAAAAGTGTTCCAATTGGTGGCTAGAAAGTATACACGTATTAGTTATTGTGCCCAGTGCTAAATGCTCTATCTATGATCACAAGAACAATATTAGCATAGCGGTTGAGGAAAGATTAAACAATTCAAAGAAATACAGTAAACTTGGAATTTGAGAGGACATTTCCACAAAGCAGCAGCAAAAACAATTAGATCCTAATTACTTCCCATTGTCCTCCAACATCCAGGAAAATACTTCAATCTTTTTCCAACCAACCTCCGGTAGAAGCCAACTTTCGTTATGATCCAAAGAACTTTTTGAAGCCAATTTTCTTGATGATTAAGGAAAGTACAAAAATTAGGGCCACCAATTATGTGGTATGTATAATCGGAGCAATAAAAAAAAGCCACTAAACAGAAACAAAATATTTACATTAAGAGACTCCAATTGTTCAACATTAAGGATAACTGATAATCACAAAAAAATATGTTTGAAGAAACCACGCAAAGAGGCATTGAGGTACACTCTAACCTCCTTAGAACCCTCTATTATACCGTTAAAAATATCCTTTTCTCTTGAGCCACCCACCTAACCACCTAACCCAAGAATCTGTTTAGCATGTTTATTCAAGGTTGAATATTGGATACTGCATGATTGGGTTCAACTCTAAATTTGAAGGTTTCTGGTTATATTTGTTGAAAGTCGACCTTTAGATTTTATGTGTCTACATGAATTTGCGTCCAACATTGAATTTTAAGGTTGCTTAAGATTTGTGTTAAGTATATCAATTTTCTTGGTAGTGACTTCAATTCTGATACAACTTTGGAAGTACCGAATGAGTTATAGGTTGTTTGAGATTTGTAGCTATCTCATCAAGTCATTTCAATTCTGTAATTTCTTGGACACCATTAATCAAATTTCTAAATAATAAACTAACTATACATACCGCAATTCCCTGAATTACATTTGTTATGAACGTTCATACAGCTTTTGTATTGTACCATGAACATCTCAATCTCTCTGATTCATGTATTTTCTCCCAACTATATACAACATTTTAGTTGCTGACACTCTGTCCCTGGGTTTGTTGAATTCTCATCCTTGGTTAAACATTTTGAGACAACGCCTTCCAAATATTATGGTATTGATGTGTTCAATTTCATAATTCCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGATGATCTCGACTTCTTGGAGGTTTGTTTACAATTGACAATTGAAATTTATGATTTTTGATTAAATGTGCCTGTAATTTTTTTAAAATTTTATTTTTTGTCTTAATGTCTTAACCCTTAGGTTGAAACGCCAATGATGAACATGATTGCTGGAGGAGCAGCAGCCCGTCCATTTGTGACCTTCCACAATGATCTTAACATGAAGTTATTTATGCGCATTGCACCTGAACTCTATCTTAAGGAGTTAGTTGTTGGTGGATTAGACCGTGTATATGAGATAGGGAAGCAATTTAGGAACGAGGGTATTGATTTGACTCATAATCCTGAATTCACCACCTGTGAGTTCTACATGGCGTTTGCTGACTACAATGATTTGATGGAGCTCACTGAGAAGATGCTAAGTGGTAATTTTTAAACTTCAGATTTTGCATGCATATTAACTCATATGGATTCTCCACCATCGCCTTTCCTAATTTCCATCCTTTTCTACTTGTATCTATTCTTCTCTGACATTGTTGACCTTAAATAGGGATGGTGAAGGAGCTTACAGGGGGCTATAAAGTAAAATATCATTCAAATGGGCTTGATAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGTTTGTTTGCAATAATTTTGTTTAGCTCGTGTTTAAACTTGCACTGCGCTGACCAGAATCTTATATTAAATTATCTTGATTTTTTTTTTGACTTACTGCAGGAGGATTGACATGATAGAGGAATTAGAAAAGATGGCAAACCTTGATATACCCAAGGACTTATCCAGTGATGAAGCTAATAAATATCTTAGAGCGGCATGCCAGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAAGTAATCCTCTTTATCTTATGATTTTATCTTTTGAAGCTAATCTTGTTTAGCTAAGAAATATTATATAGTAAGGTACGGAAATGCATGGGAAGAGAGGACAAGTAGTTCTTATTTCTGGAAAATGTACACTAGGAGTACATTTTTCTCAACAGTATTTTAAAAGTAATTATTTTGGCAGCTTGTGGGGCACTTCCTAGAAGAAACATGCGTGAATCCTGCTTTCATCATCAACCATCCGGAGATTATGAGTCCCCTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGTTTTGAATTGTTCATCAACAAACATGAAGTATGCTTCCAAAACTTAATAATACTCTGTTTTCTGTCCTTTCTTCATCATACACGTGTCTGCTTGTGCGTGCCTTCTGTTTCTGCTGTTAACATTTGATGACTACTCAGGTATGTAATGCGTACACTGAATTGAATGATCCTGTAGTACAACGCCAGCGGTTTGCCGAACAACTTAAGGTATCTTACCCTGTAATAAATAGACATCTACAGTCTTGAGTTATAGAACCTTCTGAAATCTAAACGACAATTTATTGGATTTTATTGTACTTGTTTTTTTTAATAGGACCGACAGTCGGGTGATGATGAAGCAATGGCTTTGGATGAAACGTTTTGTACGGCACTCGAGTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGCATTGATAGGCTAGCTATGTTGTTGACGGATTCACAGAACATTAAGGTTTGTGCTTCACACCTCTCTTTTTTGTGTGACCTCGATTGGCTGCTTGATTCTTCTGGTAAATGCATACTCTTCAGATCTCTCTTTTTTTTCTTTCCTTAAACTGTTCTTTTTGTGAAAATAGGAAGTTCTTCTCTTCCCAGCCATGAAGCCCCAAGATGAACCACCAGCCCCCAAAGGTACATACTATATTATTCCTGGTCTCTAGCTATTAACTTACTTTGATTGTCAGTATTTTGATGAGGCCTATACCTAAAAACGGAACCTGTTTAATCTTTCTAATCCTTCAGTATTTTTTTTAAAATGAAAAATTGCATTAATTGAAGCCTGAATTAGAGGAGGAGATCTTAATCCCTGTTTCATATTGTTATGCTCTCAGATGTATTGTTGGTTCATTCTGCGCCTTGTGAAAGTTTTTTTTATGATAATTTCCTTCATTTACTTTTGTATTTTCAGCCTCAACTGGAGTATAGGTATGATCACATTATATGAGGAAATCCAAGAGGTGCGTTTGCGATGAGGCAGTTATTTTAGGACGTCAAAAAATTTGGGTCGTATTGTTTGGCCTCCCTGCTGCTGGAGCAGGGGCTTTGTTGGAGACATTTAACATGTATGAAATTGTTCTCGTCTTTTATAATATTATCATCATTACAATTTTTTGTCGATGCATAATTTTTTAAATAGACATCTTAAATTCTTTCGAAATGCTCTTGCTATCATCCTTCTGGATACGATATAACCCAGAATCAAACTTGGGCCAAATGTCCAAACTCATTTGAGATAAAGCTGAGCTAATCTCAGTAGATTGTTCTTTTTTGAGATTTGGTTTAGGATTGATTCCATTTAATCCTTTAAGCTATGGAGAAAGGCTCTAGCCTGGCTGTTCTGCCTAGTGCATGTACT

mRNA sequence

TCTTTATTATATTTTATTTTACTTTTTCCACTCTTTTTGAAATATTTTAGTTTCGTCTTCGTGGAAACCCTAAAATTGAAACAAACTTCCCAAGTTTGCTGTTAAAAATTCCCCTCGGCTGCGCCTTTGTCTTAGTCAATTCTCTCCTCCAGACCTTGCACTCCAAGGAATCAGTGTGCTTTATAACCTTCTGCCCTTTGGAGCTTTGACTATTCATTGTCTGAAAATGGCGGATTCTGTAGACGGAGCTGCGAAGGCTGTCTCTGAATTAGCATTGGGTTCCGCTTCTGCGGCTTTAGACATGGCCGACTCTGCTCCAAGTGCTGAAGAAACTATAAGCAAGAATGCACGCAAGAAGGAATTAAAGATGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAATTGAAGGAGAAAGCAAAGCAGGAAGCATCCCAGAATAAGAAATCTGTAGCGGTAGATGATGAAGAAATGGACCCCACGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTGAAAACCCATATCCTCACAAGTTTCAGGTTTCAATGTCTCTCCTTGAGTATATTGAGAAATATGGAAGTTTAAACAATGGTGATCATCTTGAGGAAGTCATGGTTTCTCTTGCCGGGAGAATAATGAGCAAAAGGTCGTCCTCCTCGAAGTTGTTATTTTATGATCTCCATGGTTCTGGAGCTAAAATCCAAGTTATGGTGGATGCACGTAACTCAGAGCTAGATGAAGCTGAGTTTGCAAGGTTTCATGGCGCTGTCAAGCGTGGCGATATTGTTGGTGTCACTGGGTTTCCAGGAAAAACAAAGAGGGGAGAGCTCAGTATTTTTCCAAAATCATTTATTGTCCTTTCTCACTGTCTGCATATGATGCCAAGGCAGAAGGCGGCCCAAGGGTCTGAGAATGCAAATTTGAAGAAAAATGACGCATGGGTCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAAGACCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGATGATCTCGACTTCTTGGAGGTTGAAACGCCAATGATGAACATGATTGCTGGAGGAGCAGCAGCCCGGATGGTGAAGGAGCTTACAGGGGGCTATAAAGTAAAATATCATTCAAATGGGCTTGATAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGAGGATTGACATGATAGAGGAATTAGAAAAGATGGCAAACCTTGATATACCCAAGGACTTATCCAGTGATGAAGCTAATAAATATCTTAGAGCGGCATGCCAGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAACTTGTGGGGCACTTCCTAGAAGAAACATGCGTGAATCCTGCTTTCATCATCAACCATCCGGAGATTATGAGTCCCCTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGTTTTGAATTGTTCATCAACAAACATGAAGTATGTAATGCGTACACTGAATTGAATGATCCTGTAGTACAACGCCAGCGGTTTGCCGAACAACTTAAGGACCGACAGTCGGGTGATGATGAAGCAATGGCTTTGGATGAAACGTTTTGTACGGCACTCGAGTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGCATTGATAGGCTAGCTATGTTGTTGACGGATTCACAGAACATTAAGGAAGTTCTTCTCTTCCCAGCCATGAAGCCCCAAGATGAACCACCAGCCCCCAAAGCCTCAACTGGAGTATAGGTATGATCACATTATATGAGGAAATCCAAGAGGTGCGTTTGCGATGAGGCAGTTATTTTAGGACGTCAAAAAATTTGGGTCGTATTGTTTGGCCTCCCTGCTGCTGGAGCAGGGGCTTTGTTGGAGACATTTAACATGTATGAAATTGTTCTCGTCTTTTATAATATTATCATCATTACAATTTTTTGTCGATGCATAATTTTTTAAATAGACATCTTAAATTCTTTCGAAATGCTCTTGCTATCATCCTTCTGGATACGATATAACCCAGAATCAAACTTGGGCCAAATGTCCAAACTCATTTGAGATAAAGCTGAGCTAATCTCAGTAGATTGTTCTTTTTTGAGATTTGGTTTAGGATTGATTCCATTTAATCCTTTAAGCTATGGAGAAAGGCTCTAGCCTGGCTGTTCTGCCTAGTGCATGTACT

Coding sequence (CDS)

ATGGCGGATTCTGTAGACGGAGCTGCGAAGGCTGTCTCTGAATTAGCATTGGGTTCCGCTTCTGCGGCTTTAGACATGGCCGACTCTGCTCCAAGTGCTGAAGAAACTATAAGCAAGAATGCACGCAAGAAGGAATTAAAGATGAAGCAGAAGGAAGAGGAAAGGAGGCGTAAGGAGGAATTGAAGGAGAAAGCAAAGCAGGAAGCATCCCAGAATAAGAAATCTGTAGCGGTAGATGATGAAGAAATGGACCCCACGCAATATTTTGAAAATAGGCTGAAATATCTTGCATCTCAGAAGGCAGATGGTGAAAACCCATATCCTCACAAGTTTCAGGTTTCAATGTCTCTCCTTGAGTATATTGAGAAATATGGAAGTTTAAACAATGGTGATCATCTTGAGGAAGTCATGGTTTCTCTTGCCGGGAGAATAATGAGCAAAAGGTCGTCCTCCTCGAAGTTGTTATTTTATGATCTCCATGGTTCTGGAGCTAAAATCCAAGTTATGGTGGATGCACGTAACTCAGAGCTAGATGAAGCTGAGTTTGCAAGGTTTCATGGCGCTGTCAAGCGTGGCGATATTGTTGGTGTCACTGGGTTTCCAGGAAAAACAAAGAGGGGAGAGCTCAGTATTTTTCCAAAATCATTTATTGTCCTTTCTCACTGTCTGCATATGATGCCAAGGCAGAAGGCGGCCCAAGGGTCTGAGAATGCAAATTTGAAGAAAAATGACGCATGGGTCCCAGGTTGTACCAGGAATCCTGAAACCTATATTTTAAAAGACCAGGAAACTCGTTATCGTCAACGATATCTGGATTTGATGTTAAATTTGGAAGTGAGGCAAATATTCAAAACCAGAGCTAAAGTAATCCAATATGTTAGGAAGTTTCTTGATGATCTCGACTTCTTGGAGGTTGAAACGCCAATGATGAACATGATTGCTGGAGGAGCAGCAGCCCGGATGGTGAAGGAGCTTACAGGGGGCTATAAAGTAAAATATCATTCAAATGGGCTTGATAATGATCCGATTGAGATTGACTTCACTCCCCCTTTCAGGAGGATTGACATGATAGAGGAATTAGAAAAGATGGCAAACCTTGATATACCCAAGGACTTATCCAGTGATGAAGCTAATAAATATCTTAGAGCGGCATGCCAGAAGTTTGAAATCAAATGTCCTCCACCTGAAACAACTGCTCGCTTGCTGGATAAACTTGTGGGGCACTTCCTAGAAGAAACATGCGTGAATCCTGCTTTCATCATCAACCATCCGGAGATTATGAGTCCCCTGGCAAAGTGGCATAGAGCAAGACCTAGTCTAACTGAACGTTTTGAATTGTTCATCAACAAACATGAAGTATGTAATGCGTACACTGAATTGAATGATCCTGTAGTACAACGCCAGCGGTTTGCCGAACAACTTAAGGACCGACAGTCGGGTGATGATGAAGCAATGGCTTTGGATGAAACGTTTTGTACGGCACTCGAGTATGGATTGCCTCCTACTGGTGGCTGGGGAATGGGCATTGATAGGCTAGCTATGTTGTTGACGGATTCACAGAACATTAAGGAAGTTCTTCTCTTCCCAGCCATGAAGCCCCAAGATGAACCACCAGCCCCCAAAGCCTCAACTGGAGTATAG

Protein sequence

MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEELKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAARMVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFPAMKPQDEPPAPKASTGV
Homology
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BLAST of Cp4.1LG11g06370 vs. ExPASy Swiss-Prot
Match: Q9ZPI1 (Lysine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At3g11710 PE=1 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 7.3e-215
Identity = 399/620 (64.35%), Postives = 454/620 (73.23%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           M  + D   KA+SELA+ S++       SA       SKNA KKE KMKQKEEE+RRK+E
Sbjct: 1   MEGAADQTTKALSELAMDSSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDE 60

Query: 61  LK-EKAKQ-EASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLL 120
            K EKAKQ   + ++K+VA DDEEMD TQY+ENRLKYLA++KA GENPYPHKF VSMS+ 
Sbjct: 61  EKAEKAKQAPKASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIP 120

Query: 121 EYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELD 180
           +YIE YGSLNNGDH+E    SLAGRIMSKRSSSSKL FYDLHG   K+QVM DA  S LD
Sbjct: 121 KYIETYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLD 180

Query: 181 EAEFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENA 240
           EAEF + H   KRGDIVGV GFPGKTKRGELSIFP+SFI+LSHCLHMMPR+     ++N 
Sbjct: 181 EAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRK-----ADNV 240

Query: 241 NLKKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLD 300
           N KK + WVPG TRNPE Y+LKDQE+RYRQR+LD++LN+EVRQIF+TRAK+I YVR+FLD
Sbjct: 241 NAKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLD 300

Query: 301 DLDFLEVETPMMNMIAGGAAAR-------------------------------------- 360
           + +FLEVETPMMNMIAGGAAAR                                      
Sbjct: 301 NKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIG 360

Query: 361 -----------------------------------------MVKELTGGYKVKYHSNGLD 420
                                                    MVKELTGGYK+KY++NG D
Sbjct: 361 KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYD 420

Query: 421 NDPIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTA 480
            DPIEIDFTPPFRRI+MI ELEK+A L+IPKDL+S+EANKYL  AC +F++KCPPP+TTA
Sbjct: 421 KDPIEIDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTA 480

Query: 481 RLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTE 540
           RLLDKLVG FLE TCVNP FIIN PEIMSPLAKWHR++  LTERFELFINKHE+CNAYTE
Sbjct: 481 RLLDKLVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTE 540

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy Swiss-Prot
Match: Q6F2U9 (Lysine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0586800 PE=2 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 1.4e-205
Identity = 375/584 (64.21%), Postives = 425/584 (72.77%), Query Frame = 0 

Query: 35  ETISKNARKKELKMKQKEEERRRKEELKEK----AKQEASQNKKSVAVDDEEMDPTQYFE 94
           + +SKNA+K+E K K++EEERR KEE K+K        + +  K  A DDEEMDPTQY+E
Sbjct: 25  QQLSKNAKKREEKRKKQEEERRLKEEEKKKKAAATAAASGEPPKESAADDEEMDPTQYYE 84

Query: 95  NRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSS 154
           NRLK L S KA G NPYPHKF  ++++ +YIEKY S+N GD L +V   LAGRIM+KR+ 
Sbjct: 85  NRLKALDSLKATGVNPYPHKFLANITVADYIEKYKSMNVGDKLVDVTECLAGRIMTKRAQ 144

Query: 155 SSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTKRGELS 214
           SSKLLFYDL+G G K+QV  DAR SEL++ EF +FH  +KRGDIVGV G+PGK+KRGELS
Sbjct: 145 SSKLLFYDLYGGGEKVQVFADARTSELEDNEFIKFHSTLKRGDIVGVCGYPGKSKRGELS 204

Query: 215 IFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPETYILKDQETRYRQRY 274
           IFPK  +VLS CLHMMPRQK ++GS          W PG  RN E Y+L+DQETRYRQRY
Sbjct: 205 IFPKKIVVLSPCLHMMPRQK-SEGSAVPT-----PWAPGMGRNIEKYVLRDQETRYRQRY 264

Query: 275 LDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAAR---------- 334
           LDLM+N EVR IFKTR+KV+ ++RKFLD LDFLEVETPMMNMIAGGAAAR          
Sbjct: 265 LDLMVNHEVRHIFKTRSKVVSFIRKFLDGLDFLEVETPMMNMIAGGAAARPFVTHHNELN 324

Query: 335 ------------------------------------------------------------ 394
                                                                       
Sbjct: 325 MRLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHNPEFTTCEFYMAYADYNDLI 384

Query: 395 ---------MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANLDIPKD 454
                    MVKELTGGYK+KYH+NG++  PIEIDFTPPFR+IDMIEELE MA L+IPKD
Sbjct: 385 ELTETMLSGMVKELTGGYKIKYHANGVEKPPIEIDFTPPFRKIDMIEELEAMAKLNIPKD 444

Query: 455 LSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHPEIMSPLA 514
           LSSDEANKYL  AC K+++KCPPP+TT RLLDKLVGHFLEETCVNP FIINHPEIMSPLA
Sbjct: 445 LSSDEANKYLIDACAKYDVKCPPPQTTTRLLDKLVGHFLEETCVNPTFIINHPEIMSPLA 504

Query: 515 KWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEAMALDETF 536
           KWHR+RP LTERFELF+NKHEVCNAYTELNDPVVQRQRF EQLKDRQSGDDEAMALDETF
Sbjct: 505 KWHRSRPGLTERFELFVNKHEVCNAYTELNDPVVQRQRFEEQLKDRQSGDDEAMALDETF 564

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy Swiss-Prot
Match: Q43776 (Lysine--tRNA ligase OS=Solanum lycopersicum OX=4081 GN=LYSRS PE=2 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 4.8e-174
Identity = 315/592 (53.21%), Postives = 402/592 (67.91%), Query Frame = 0 

Query: 28  DSAPSAEETISKNARKKELKMKQKEEERRRKEELKEKAKQEASQNKKSVAVDDEEMDPTQ 87
           DS+ S  E +SKNA K+E K K+KE+  + K+      +Q    N      +++++DPTQ
Sbjct: 2   DSSVST-EPLSKNALKREKKAKEKEQLEQEKKAAAVAKRQMEQHN----LPENDDLDPTQ 61

Query: 88  YFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIMSK 147
           Y  NRL+ + S +  G NPYPHKF ++MS+ E+I +Y  LN G+  E++ +SLAGR++SK
Sbjct: 62  YLANRLRNIESLRESGINPYPHKFFITMSIPEFISRYAHLNTGEFPEDIDMSLAGRVISK 121

Query: 148 RSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTKRG 207
           R+SSSKL FY+L G GA++QV+  AR+S++D  +F+ +   VKRGDI+GV G+PGK+KRG
Sbjct: 122 RASSSKLYFYELLGGGARVQVLASARDSDVDAVQFSNYQSGVKRGDIIGVRGYPGKSKRG 181

Query: 208 ELSIFPKSFIVLSHCLHMMPRQKAAQGSENA------NLKKNDAWVPGCTRNPETYILKD 267
           ELSIF K FIVL+ CLHM+PR+  +   +         +   D W PG  RNPE+Y+L+D
Sbjct: 182 ELSIFAKPFIVLAPCLHMLPRRLTSSIVDETRTQNFQGITAYDTWTPGDLRNPESYVLRD 241

Query: 268 QETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAAR- 327
           QETRYRQRYLDLM+N EVR +F+TRA++I Y+R FLD+L+FLEVETP MN+ AGGA+AR 
Sbjct: 242 QETRYRQRYLDLMMNPEVRALFRTRARIISYIRSFLDNLEFLEVETPSMNLTAGGASARP 301

Query: 328 ------------------------------------------------------------ 387
                                                                       
Sbjct: 302 FITHHNELDTELLIRVSPELYLKKLVVGGFDRVYELGKHFRNEGMDLTHSPEFTMCELYM 361

Query: 388 ------------------MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEK 447
                             MVK+LTG YK++YH+NGLDN+PIEIDFTPPFR+IDM+ ELEK
Sbjct: 362 AYADYNDLMDLTEQLLSGMVKDLTGSYKIRYHANGLDNEPIEIDFTPPFRKIDMLSELEK 421

Query: 448 MANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIIN 507
           +AN+ IP+DLSS+ ANK+L   C+KF++KCPPP TT RLLDKLVGHF+E  C+NP FIIN
Sbjct: 422 VANISIPRDLSSESANKHLVDVCEKFDVKCPPPHTTTRLLDKLVGHFIEVNCINPTFIIN 481

Query: 508 HPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDD 535
           HPEIMSPLAK  R+ P LTERF LF+N+ E+C+AYTELNDP  QR+RFAEQLKDRQ GDD
Sbjct: 482 HPEIMSPLAKSRRSEPGLTERFNLFVNRRELCDAYTELNDPTAQRERFAEQLKDRQLGDD 541

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy Swiss-Prot
Match: P37879 (Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 8.2e-142
Identity = 278/599 (46.41%), Postives = 359/599 (59.93%), Query Frame = 0 

Query: 34  EETISKNARKKELKMKQK--EEERRRKEELKEKAKQEAS------QNKKSVAVDDEEMDP 93
           E  +SKN  K+ LK ++K  E+E ++KE ++++  Q A+           V V++E +DP
Sbjct: 14  EPKLSKNELKRRLKAEKKLAEKEAKQKELIEKQLSQAAAAAATNHTADNGVGVEEETLDP 73

Query: 94  TQYFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEVMVSLAGRIM 153
            QY++ R + +   K  GE+PYPHKF V +SL ++I++Y  L  GDHL ++ + +AGRI 
Sbjct: 74  NQYYKIRSQAIHQLKVSGEDPYPHKFHVDISLTQFIQEYSQLQPGDHLTDITLKVAGRIH 133

Query: 154 SKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIVGVTGFPGKTK 213
           +KR+S  KL+FYDL G G K+QVM ++RN + +E EF R +  ++RGDI+GV G PGKTK
Sbjct: 134 AKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEE-EFVRINNKLRRGDIIGVQGNPGKTK 193

Query: 214 RGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPETYILKDQETR 273
           +GELSI P    +LS CLHM+P                             + LKD+ETR
Sbjct: 194 KGELSIIPYEITLLSPCLHMLPHLH--------------------------FGLKDKETR 253

Query: 274 YRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAGGAAAR----- 333
           YRQRYLDL+LN  VRQ F  RAK+I Y+R FLD+L FLE+ETPMMN+I GGA A+     
Sbjct: 254 YRQRYLDLILNDFVRQKFIVRAKIITYIRSFLDELGFLEIETPMMNIIPGGAVAKPFITY 313

Query: 334 ------------------------------------------------------------ 393
                                                                       
Sbjct: 314 HNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD 373

Query: 394 --------------MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDMIEELEKMANL 453
                         MVK +TG YK+ YH +G + +  EIDFTPPFRRI M+EELEK   +
Sbjct: 374 YHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGEAYEIDFTPPFRRISMVEELEKALGV 433

Query: 454 DIPKD--LSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETCVNPAFIINHP 513
            +P+     ++E  K L   C    ++CPPP TTARLLDKLVG FLE TC+NP FI +HP
Sbjct: 434 KLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTCINPTFICDHP 493

Query: 514 EIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQLKDRQSGDDEA 544
           +IMSPLAKWHR++  LTERFELF+ K E+CNAYTELNDP+ QRQ F EQ K + +GDDEA
Sbjct: 494 QIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPMRQRQLFEEQAKAKAAGDDEA 553

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy Swiss-Prot
Match: Q99MN1 (Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 5.3e-141
Identity = 278/602 (46.18%), Postives = 359/602 (59.63%), Query Frame = 0 

Query: 22  AALDMADSAPSAEETISKNARKKELKMKQK--EEERRRKEELKEKAKQEASQNK----KS 81
           A L  ++     E+ +SKN  K+ LK ++K  E+E ++KE  +++  Q AS         
Sbjct: 2   ATLQESEVKVDGEQKLSKNELKRRLKAEKKLAEKEAKQKELSEKQLNQTASAPNHTADNG 61

Query: 82  VAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEE 141
           V  ++E +DP QY++ R + +   K  GE+PYPHKF V +SL ++I++Y  L  GDHL +
Sbjct: 62  VGAEEETLDPNQYYKIRSQAVQQLKVTGEDPYPHKFHVDISLTQFIQEYSHLQPGDHLTD 121

Query: 142 VMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRGDIV 201
           V + +AGRI +KR+S  KL+FYDL G G K+QVM ++RN + +E EF   +  ++RGDI+
Sbjct: 122 VTLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEE-EFVHINNKLRRGDII 181

Query: 202 GVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDAWVPGCTRNPE 261
           GV G PGKTK+GELSI P+   +LS CLHM+P                            
Sbjct: 182 GVEGNPGKTKKGELSIIPQEITLLSPCLHMLPHLH------------------------- 241

Query: 262 TYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEVETPMMNMIAG 321
            + LKD+ETRYRQRYLDL+LN  VRQ F  R+K+I Y+R FLD+L FLE+ETPMMN+I G
Sbjct: 242 -FGLKDKETRYRQRYLDLILNDFVRQKFIVRSKIITYIRSFLDELGFLEIETPMMNIIPG 301

Query: 322 GAAAR------------------------------------------------------- 381
           GA A+                                                       
Sbjct: 302 GAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNPEFT 361

Query: 382 ------------------------MVKELTGGYKVKYHSNGLDNDPIEIDFTPPFRRIDM 441
                                   MVK +TG YK+ YH +G +    E+DFTPPFRRI M
Sbjct: 362 TCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEVDFTPPFRRISM 421

Query: 442 IEELEKMANLDIPKD--LSSDEANKYLRAACQKFEIKCPPPETTARLLDKLVGHFLEETC 501
           +EELEK   + +P+     ++E  K L   C    ++CPPP TTARLLDKLVG FLE TC
Sbjct: 422 VEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLEVTC 481

Query: 502 VNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAEQL 537
           ++P FI +HP+IMSPLAKWHR++  LTERFELF+ K E+CNAYTELNDPV QRQ F EQ 
Sbjct: 482 ISPTFICDHPQIMSPLAKWHRSKEGLTERFELFVMKKEICNAYTELNDPVRQRQLFEEQA 541

[Close]
BLAST of Cp4.1LG11g06370 vs. NCBI nr
Match: XP_023546816.1 (lysine--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1030 bits (2662), Expect = 0.0
Identity = 546/625 (87.36%), Postives = 546/625 (87.36%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY
Sbjct: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
Sbjct: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
Sbjct: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL
Sbjct: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 301 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTGGYKVKYHSNGLDND
Sbjct: 361 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDND 420

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
Sbjct: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
Sbjct: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 600

[Close]
BLAST of Cp4.1LG11g06370 vs. NCBI nr
Match: XP_022997407.1 (lysine--tRNA ligase, cytoplasmic-like [Cucurbita maxima])

HSP 1 Score: 1028 bits (2657), Expect = 0.0
Identity = 544/625 (87.04%), Postives = 546/625 (87.36%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSLLEY
Sbjct: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEY 120

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
Sbjct: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
Sbjct: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL
Sbjct: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 301 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTGGYKVKYHSNGLDND
Sbjct: 361 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDND 420

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRR+DMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
Sbjct: 421 PIEIDFTPPFRRVDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
Sbjct: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 600

[Close]
BLAST of Cp4.1LG11g06370 vs. NCBI nr
Match: KAG6598875.1 (Lysine--tRNA ligase, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1024 bits (2647), Expect = 0.0
Identity = 543/625 (86.88%), Postives = 544/625 (87.04%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MADSVDGAAKAVSELALGSASAALDMADSAPS EETISKNARKKELKMKQKEEERRRKEE
Sbjct: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSVEETISKNARKKELKMKQKEEERRRKEE 60

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSLLEY
Sbjct: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEY 120

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
Sbjct: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
Sbjct: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVR IFKTRAKVIQYVRKFLDDL
Sbjct: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRLIFKTRAKVIQYVRKFLDDL 300

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 301 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTGGYKVKYHSNGLDND
Sbjct: 361 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDND 420

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
Sbjct: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
Sbjct: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 600

[Close]
BLAST of Cp4.1LG11g06370 vs. NCBI nr
Match: XP_022929668.1 (lysine--tRNA ligase, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 1022 bits (2642), Expect = 0.0
Identity = 543/625 (86.88%), Postives = 544/625 (87.04%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSLLEY
Sbjct: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEY 120

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
Sbjct: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
Sbjct: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVR IFKTRAKVIQYVRKFLDDL
Sbjct: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRLIFKTRAKVIQYVRKFLDDL 300

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 301 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTGGYKVKYHSNGLDN 
Sbjct: 361 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNY 420

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
Sbjct: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
Sbjct: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 600

[Close]
BLAST of Cp4.1LG11g06370 vs. NCBI nr
Match: XP_008451573.1 (PREDICTED: lysine--tRNA ligase, cytoplasmic [Cucumis melo])

HSP 1 Score: 989 bits (2558), Expect = 0.0
Identity = 520/625 (83.20%), Postives = 534/625 (85.44%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MA S+DGAAKAVS+LALGS +AA DMADSAP AEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 65  MASSIDGAAKAVSDLALGSTTAAPDMADSAPGAEETISKNARKKELKMKQKEEERRRKEE 124

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEA QNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSL EY
Sbjct: 125 LKEKAKQEAPQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLPEY 184

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYG+L+NGDHLE+V+VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVM DARNSELDEA
Sbjct: 185 IEKYGNLSNGDHLEDVLVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMTDARNSELDEA 244

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFH +VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAA GS+NANL
Sbjct: 245 EFARFHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAPGSDNANL 304

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAW PGCTRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAKVIQY+RKFLDDL
Sbjct: 305 KKNDAWAPGCTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKVIQYIRKFLDDL 364

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 365 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 424

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTG YKVKYHSNGLDND
Sbjct: 425 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGSYKVKYHSNGLDND 484

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANL+IPKDLSSDEANKYLR ACQKFEIKCPPPETTARL
Sbjct: 485 PIEIDFTPPFRRIDMIEELEKMANLNIPKDLSSDEANKYLREACQKFEIKCPPPETTARL 544

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELF+NKHEVCNAYTELN
Sbjct: 545 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFVNKHEVCNAYTELN 604

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 605 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 664

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy TrEMBL
Match: A0A6J1K4Y5 (Lysine--tRNA ligase OS=Cucurbita maxima OX=3661 GN=LOC111492333 PE=3 SV=1)

HSP 1 Score: 1028 bits (2657), Expect = 0.0
Identity = 544/625 (87.04%), Postives = 546/625 (87.36%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSLLEY
Sbjct: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEY 120

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
Sbjct: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
Sbjct: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL
Sbjct: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 301 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTGGYKVKYHSNGLDND
Sbjct: 361 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDND 420

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRR+DMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
Sbjct: 421 PIEIDFTPPFRRVDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
Sbjct: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 600

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy TrEMBL
Match: A0A6J1ESV7 (Lysine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111436183 PE=3 SV=1)

HSP 1 Score: 1022 bits (2642), Expect = 0.0
Identity = 543/625 (86.88%), Postives = 544/625 (87.04%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSLLEY
Sbjct: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLLEY 120

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA
Sbjct: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL
Sbjct: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVR IFKTRAKVIQYVRKFLDDL
Sbjct: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRLIFKTRAKVIQYVRKFLDDL 300

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 301 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 360

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTGGYKVKYHSNGLDN 
Sbjct: 361 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKVKYHSNGLDNY 420

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL
Sbjct: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN
Sbjct: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 600

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy TrEMBL
Match: A0A1S3BR70 (Lysine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103492812 PE=3 SV=1)

HSP 1 Score: 989 bits (2558), Expect = 0.0
Identity = 520/625 (83.20%), Postives = 534/625 (85.44%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MA S+DGAAKAVS+LALGS +AA DMADSAP AEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 65  MASSIDGAAKAVSDLALGSTTAAPDMADSAPGAEETISKNARKKELKMKQKEEERRRKEE 124

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEA QNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSL EY
Sbjct: 125 LKEKAKQEAPQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLPEY 184

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYG+L+NGDHLE+V+VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVM DARNSELDEA
Sbjct: 185 IEKYGNLSNGDHLEDVLVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMTDARNSELDEA 244

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFH +VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAA GS+NANL
Sbjct: 245 EFARFHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAPGSDNANL 304

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAW PGCTRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAKVIQY+RKFLDDL
Sbjct: 305 KKNDAWAPGCTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKVIQYIRKFLDDL 364

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 365 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 424

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTG YKVKYHSNGLDND
Sbjct: 425 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGSYKVKYHSNGLDND 484

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANL+IPKDLSSDEANKYLR ACQKFEIKCPPPETTARL
Sbjct: 485 PIEIDFTPPFRRIDMIEELEKMANLNIPKDLSSDEANKYLREACQKFEIKCPPPETTARL 544

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELF+NKHEVCNAYTELN
Sbjct: 545 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFVNKHEVCNAYTELN 604

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 605 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 664

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy TrEMBL
Match: A0A5A7UI80 (Lysine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G00010 PE=3 SV=1)

HSP 1 Score: 981 bits (2536), Expect = 0.0
Identity = 515/622 (82.80%), Postives = 530/622 (85.21%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MA S+DGAAKAVS+LALGS +AA DMADSAP AEETISKNARKKELKMKQKEEERRRKEE
Sbjct: 65  MASSIDGAAKAVSDLALGSTTAAPDMADSAPGAEETISKNARKKELKMKQKEEERRRKEE 124

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEA QNKKSVAVDDEEMDPTQYFENRLKYLASQKADG+NPYPHKFQVSMSL EY
Sbjct: 125 LKEKAKQEAPQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGKNPYPHKFQVSMSLPEY 184

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYG+L+NGDHLE+V+VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVM DARNSELDEA
Sbjct: 185 IEKYGNLSNGDHLEDVLVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMTDARNSELDEA 244

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFH +VKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAA GS+NANL
Sbjct: 245 EFARFHASVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAPGSDNANL 304

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAW PGCTRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTRAKVIQY+RKFLDDL
Sbjct: 305 KKNDAWAPGCTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRAKVIQYIRKFLDDL 364

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 365 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 424

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTG YKVKYHSNGLDND
Sbjct: 425 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGSYKVKYHSNGLDND 484

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANL+IPKDLSSDEANKYLR ACQKFEIKCPPPETTARL
Sbjct: 485 PIEIDFTPPFRRIDMIEELEKMANLNIPKDLSSDEANKYLREACQKFEIKCPPPETTARL 544

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELF+NKHEVCNAYTELN
Sbjct: 545 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFVNKHEVCNAYTELN 604

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 543
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN
Sbjct: 605 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 664

[Close]
BLAST of Cp4.1LG11g06370 vs. ExPASy TrEMBL
Match: A0A0A0LHA8 (Lysine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_2G059840 PE=3 SV=1)

HSP 1 Score: 979 bits (2531), Expect = 0.0
Identity = 513/625 (82.08%), Postives = 529/625 (84.64%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           MA S+DGAAKAVS+LALGS   A DM DSAP +EETISKNARKKELKMKQKEEERRRKEE
Sbjct: 65  MASSIDGAAKAVSDLALGSTIPAPDMVDSAPGSEETISKNARKKELKMKQKEEERRRKEE 124

Query: 61  LKEKAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEY 120
           LKEKAKQEA QNKKSVAVDDEEMDPTQYFENRLKYLASQKADG NPYPHKFQVSMSL EY
Sbjct: 125 LKEKAKQEAPQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGNNPYPHKFQVSMSLPEY 184

Query: 121 IEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEA 180
           IEKYGSL+NGDHLE+V+VSLAGRIMSKRSSSSKL+FYDLHGSGAKIQVM DARNSELDEA
Sbjct: 185 IEKYGSLSNGDHLEDVLVSLAGRIMSKRSSSSKLIFYDLHGSGAKIQVMTDARNSELDEA 244

Query: 181 EFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANL 240
           EFARFH +VKRGDIVGVTGFPGKTKRGELSIFPKSF+VLSHCLHMMPRQKAA GS+NANL
Sbjct: 245 EFARFHASVKRGDIVGVTGFPGKTKRGELSIFPKSFVVLSHCLHMMPRQKAAPGSDNANL 304

Query: 241 KKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDL 300
           KKNDAW PGCTRNPETYILKDQETRYRQRYLDLMLN+EVRQIFKTR+KVIQY+RKFLDDL
Sbjct: 305 KKNDAWAPGCTRNPETYILKDQETRYRQRYLDLMLNMEVRQIFKTRSKVIQYIRKFLDDL 364

Query: 301 DFLEVETPMMNMIAGGAAAR---------------------------------------- 360
           DFLEVETPMMNMIAGGAAAR                                        
Sbjct: 365 DFLEVETPMMNMIAGGAAARPFVTFHNDLNMKLFMRIAPELYLKELVVGGLDRVYEIGKQ 424

Query: 361 ---------------------------------------MVKELTGGYKVKYHSNGLDND 420
                                                  MVKELTG YKVKYHSNGLDND
Sbjct: 425 FRNEGIDLTHNPEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGSYKVKYHSNGLDND 484

Query: 421 PIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTARL 480
           PIEIDFTPPFRRIDMIEELEKMANL+IPKDLSSDEANKYLR ACQKFEIKCPPPETTARL
Sbjct: 485 PIEIDFTPPFRRIDMIEELEKMANLNIPKDLSSDEANKYLREACQKFEIKCPPPETTARL 544

Query: 481 LDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 540
           LDKLVGHFLEE CVNPAFIINHPEIMSPLAKWHRARPSLTERFELF+NKHEVCNAYTELN
Sbjct: 545 LDKLVGHFLEEMCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFVNKHEVCNAYTELN 604

Query: 541 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQN 546
           DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDR+AMLLTDSQN
Sbjct: 605 DPVVQRQRFAEQLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRIAMLLTDSQN 664

[Close]
BLAST of Cp4.1LG11g06370 vs. TAIR 10
Match: AT3G11710.1 (lysyl-tRNA synthetase 1 )

HSP 1 Score: 748.0 bits (1930), Expect = 5.2e-216
Identity = 399/620 (64.35%), Postives = 454/620 (73.23%), Query Frame = 0 

Query: 1   MADSVDGAAKAVSELALGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEE 60
           M  + D   KA+SELA+ S++       SA       SKNA KKE KMKQKEEE+RRK+E
Sbjct: 1   MEGAADQTTKALSELAMDSSTTLNAAESSAGDGAGPRSKNALKKEQKMKQKEEEKRRKDE 60

Query: 61  LK-EKAKQ-EASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLL 120
            K EKAKQ   + ++K+VA DDEEMD TQY+ENRLKYLA++KA GENPYPHKF VSMS+ 
Sbjct: 61  EKAEKAKQAPKASSQKAVAADDEEMDATQYYENRLKYLAAEKAKGENPYPHKFAVSMSIP 120

Query: 121 EYIEKYGSLNNGDHLEEVMVSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELD 180
           +YIE YGSLNNGDH+E    SLAGRIMSKRSSSSKL FYDLHG   K+QVM DA  S LD
Sbjct: 121 KYIETYGSLNNGDHVENAEESLAGRIMSKRSSSSKLFFYDLHGDDFKVQVMADASKSGLD 180

Query: 181 EAEFARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENA 240
           EAEF + H   KRGDIVGV GFPGKTKRGELSIFP+SFI+LSHCLHMMPR+     ++N 
Sbjct: 181 EAEFLKLHSNAKRGDIVGVIGFPGKTKRGELSIFPRSFILLSHCLHMMPRK-----ADNV 240

Query: 241 NLKKNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLD 300
           N KK + WVPG TRNPE Y+LKDQE+RYRQR+LD++LN+EVRQIF+TRAK+I YVR+FLD
Sbjct: 241 NAKKPEIWVPGQTRNPEAYVLKDQESRYRQRHLDMILNVEVRQIFRTRAKIISYVRRFLD 300

Query: 301 DLDFLEVETPMMNMIAGGAAAR-------------------------------------- 360
           + +FLEVETPMMNMIAGGAAAR                                      
Sbjct: 301 NKNFLEVETPMMNMIAGGAAARPFVTHHNDLDMRLYMRIAPELYLKQLIVGGLERVYEIG 360

Query: 361 -----------------------------------------MVKELTGGYKVKYHSNGLD 420
                                                    MVKELTGGYK+KY++NG D
Sbjct: 361 KQFRNEGIDLTHNPEFTTCEFYMAFADYNDLMEMTEVMLSGMVKELTGGYKIKYNANGYD 420

Query: 421 NDPIEIDFTPPFRRIDMIEELEKMANLDIPKDLSSDEANKYLRAACQKFEIKCPPPETTA 480
            DPIEIDFTPPFRRI+MI ELEK+A L+IPKDL+S+EANKYL  AC +F++KCPPP+TTA
Sbjct: 421 KDPIEIDFTPPFRRIEMIGELEKVAKLNIPKDLASEEANKYLIDACARFDVKCPPPQTTA 480

Query: 481 RLLDKLVGHFLEETCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTE 540
           RLLDKLVG FLE TCVNP FIIN PEIMSPLAKWHR++  LTERFELFINKHE+CNAYTE
Sbjct: 481 RLLDKLVGEFLEPTCVNPTFIINQPEIMSPLAKWHRSKSGLTERFELFINKHELCNAYTE 540

[Close]
BLAST of Cp4.1LG11g06370 vs. TAIR 10
Match: AT3G13490.1 (Lysyl-tRNA synthetase, class II )

HSP 1 Score: 216.1 bits (549), Expect = 7.1e-56
Identity = 171/573 (29.84%), Postives = 259/573 (45.20%), Query Frame = 0 

Query: 64  KAKQEASQNKKSVAVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEK 123
           +  + + +N++S +  +   D       RLK +   +  G  PY +K++ S S  +  E 
Sbjct: 60  ETSKPSGRNRRSASSSNSTSDREAIRSIRLKKVEELRGQGLEPYAYKWEKSHSANQLQEI 119

Query: 124 YGSLNNGDHLEEVM--VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAE 183
           Y  L NG+  +  +  VS+AGR++++R +  KL F  L      IQ+  +     L + +
Sbjct: 120 YKHLANGEESDNEIDCVSIAGRVVARR-AFGKLAFLTLRDDSGTIQLYCE--KERLSDDQ 179

Query: 184 FARFHGAVKRGDIVGVTGFPGKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLK 243
           F +    +  GDI+G +G   +T++GELSI   SF +L+  L  +P              
Sbjct: 180 FEQLKQFIDIGDILGASGSMKRTEKGELSICVNSFSILTKSLLPLP-------------- 239

Query: 244 KNDAWVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLD 303
                        + + L D + RYRQRY+D++ N EV  +F+ RAK++  +RK ++   
Sbjct: 240 ------------DKYHGLTDIDKRYRQRYVDMIANPEVADVFRRRAKIVSEIRKTVESFG 299

Query: 304 FLEVETPMMNMIAGGAAAR----------------------MVKELTGGYKVKYHSNGL- 363
           +LEVETP++   AGGA AR                      + + L GG++  Y    + 
Sbjct: 300 YLEVETPVLQGAAGGAEARPFVTFHNSLGRDLYLRIATELHLKRMLVGGFEKVYEIGRIF 359

Query: 364 DNDPIEIDFTPPFRRIDMIE------ELEKMANLDIPKDLSSDEANKYLRAACQKFEIKC 423
            N+ I     P F  I+M E       +  MA L + +   S   N  L    Q  EI  
Sbjct: 360 RNEGISTRHNPEFTTIEMYEAYSDYHSMMDMAELIVTQ--CSMAVNGKLTIDYQGTEICL 419

Query: 424 PPP---ETTARLLDKL----------------------------------------VGHF 483
             P   ET   L+ ++                                        +GH 
Sbjct: 420 ERPWRRETMHNLVKEITGINFSELGEDLGNAKDTVLLALQDVLEPKDKSGIRACSSLGHL 479

Query: 484 LEE--------TCVNPAFIINHPEIMSPLAKWHRARPSLTERFELFINKHEVCNAYTELN 535
           L E          V P F++++P  +SPLAK HR    LTERFELFI   E+ NA++EL 
Sbjct: 480 LNEIFEVVVEPKLVQPTFVLDYPIEISPLAKPHRGNAGLTERFELFICGREMANAFSELT 539

[Close]
BLAST of Cp4.1LG11g06370 vs. TAIR 10
Match: AT3G30805.1 (Class II aminoacyl-tRNA and biotin synthetases superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 7.4e-21
Identity = 46/53 (86.79%), Postives = 47/53 (88.68%), Query Frame = 0 

Query: 476 DRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLF 529
           DRQSGDDEAMA+DETFC ALEYGLPPTGGWGMGIDR  MLLTDSQNIK  L F
Sbjct: 71  DRQSGDDEAMAMDETFCMALEYGLPPTGGWGMGIDRPLMLLTDSQNIKVPLFF 123

[Close]
BLAST of Cp4.1LG11g06370 vs. TAIR 10
Match: AT4G31180.1 (Class II aminoacyl-tRNA and biotin synthetases superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 5.2e-06
Identity = 35/117 (29.91%), Postives = 54/117 (46.15%), Query Frame = 0 

Query: 416 NPAFIINH--PEIMSPLAKWHRA-RPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAE 475
           N  F I H  P+ + P      A  P  +  F++FI   E+ +    ++ P V  QR  E
Sbjct: 442 NTEFYILHRYPKAVRPFYTMTCADNPLYSNSFDVFIRGEEIISGAQRVHIPEVLEQRAGE 501

Query: 476 QLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFP 530
                  G D  +    T+  +  YG P  GG+G+G++R+ ML     NI++  LFP
Sbjct: 502 ------CGID--VKTISTYIDSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFP 550


HSP 2 Score: 43.1 bits (100), Expect = 8.2e-04
Identity = 73/315 (23.17%), Postives = 140/315 (44.44%), Query Frame = 0 

Query: 17  LGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEELKEKAKQEASQNKKSV 76
           + S S    ++ S  +AEE+  K ++K   K   K E+ RR++E     ++EA++   S+
Sbjct: 1   MSSESEIPPLSSSTAAAEESGEKTSKKAAKKEAAKLEKLRRRQE-----QEEATRRTASI 60

Query: 77  AVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEV 136
           ++++ +     Y +  L  L S      +P   K+      +E +E     +  D +EE+
Sbjct: 61  SLEENDEFSNNYGDVTLTELQS----SADPKAGKW------IEAVEGKEWTDVSDLVEEM 120

Query: 137 M---VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRG- 196
           +   V + GR+ + R +S+KL F  L  SG+ +Q +V         A   ++   + R  
Sbjct: 121 LESEVLIRGRVHTNRPTSNKLGFVVLRESGSTVQCVVSQSEKTKVGANMVKYLKQLSRES 180

Query: 197 --DIVGVTGFP-----GKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDA 256
             D++GV   P     G T++ E+ +  +    ++  L  +P           +  +++A
Sbjct: 181 FVDVIGVVTLPKEPLTGTTQQVEIQV--RKVYCINKSLAKLPLSV-------EDAARSEA 240

Query: 257 WVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEV 316
            +    + P      +Q+TR   R LDL      + IF+ + +V    R+ L   +F+ +
Sbjct: 241 DIEASLQTPSPAARVNQDTRLNYRVLDLRTPAN-QAIFQLQYEVEYAFREKLRFKNFVGI 290

Query: 317 ETP--MMNMIAGGAA 319
            TP  M     GG+A
Sbjct: 301 HTPKLMAGSSEGGSA 290

[Close]
BLAST of Cp4.1LG11g06370 vs. TAIR 10
Match: AT4G31180.2 (Class II aminoacyl-tRNA and biotin synthetases superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 5.2e-06
Identity = 35/117 (29.91%), Postives = 54/117 (46.15%), Query Frame = 0 

Query: 416 NPAFIINH--PEIMSPLAKWHRA-RPSLTERFELFINKHEVCNAYTELNDPVVQRQRFAE 475
           N  F I H  P+ + P      A  P  +  F++FI   E+ +    ++ P V  QR  E
Sbjct: 442 NTEFYILHRYPKAVRPFYTMTCADNPLYSNSFDVFIRGEEIISGAQRVHIPEVLEQRAGE 501

Query: 476 QLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGMGIDRLAMLLTDSQNIKEVLLFP 530
                  G D  +    T+  +  YG P  GG+G+G++R+ ML     NI++  LFP
Sbjct: 502 ------CGID--VKTISTYIDSFRYGAPLHGGFGVGLERVVMLFCALNNIRKTSLFP 550


HSP 2 Score: 43.1 bits (100), Expect = 8.2e-04
Identity = 73/315 (23.17%), Postives = 140/315 (44.44%), Query Frame = 0 

Query: 17  LGSASAALDMADSAPSAEETISKNARKKELKMKQKEEERRRKEELKEKAKQEASQNKKSV 76
           + S S    ++ S  +AEE+  K ++K   K   K E+ RR++E     ++EA++   S+
Sbjct: 1   MSSESEIPPLSSSTAAAEESGEKTSKKAAKKEAAKLEKLRRRQE-----QEEATRRTASI 60

Query: 77  AVDDEEMDPTQYFENRLKYLASQKADGENPYPHKFQVSMSLLEYIEKYGSLNNGDHLEEV 136
           ++++ +     Y +  L  L S      +P   K+      +E +E     +  D +EE+
Sbjct: 61  SLEENDEFSNNYGDVTLTELQS----SADPKAGKW------IEAVEGKEWTDVSDLVEEM 120

Query: 137 M---VSLAGRIMSKRSSSSKLLFYDLHGSGAKIQVMVDARNSELDEAEFARFHGAVKRG- 196
           +   V + GR+ + R +S+KL F  L  SG+ +Q +V         A   ++   + R  
Sbjct: 121 LESEVLIRGRVHTNRPTSNKLGFVVLRESGSTVQCVVSQSEKTKVGANMVKYLKQLSRES 180

Query: 197 --DIVGVTGFP-----GKTKRGELSIFPKSFIVLSHCLHMMPRQKAAQGSENANLKKNDA 256
             D++GV   P     G T++ E+ +  +    ++  L  +P           +  +++A
Sbjct: 181 FVDVIGVVTLPKEPLTGTTQQVEIQV--RKVYCINKSLAKLPLSV-------EDAARSEA 240

Query: 257 WVPGCTRNPETYILKDQETRYRQRYLDLMLNLEVRQIFKTRAKVIQYVRKFLDDLDFLEV 316
            +    + P      +Q+TR   R LDL      + IF+ + +V    R+ L   +F+ +
Sbjct: 241 DIEASLQTPSPAARVNQDTRLNYRVLDLRTPAN-QAIFQLQYEVEYAFREKLRFKNFVGI 290

Query: 317 ETP--MMNMIAGGAA 319
            TP  M     GG+A
Sbjct: 301 HTPKLMAGSSEGGSA 290

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g06370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZPI17.3e-21564.35Lysine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At3g11710 PE... [more]
Q6F2U91.4e-20564.21Lysine--tRNA ligase OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0586800 PE=... [more]
Q437764.8e-17453.21Lysine--tRNA ligase OS=Solanum lycopersicum OX=4081 GN=LYSRS PE=2 SV=1[more]
P378798.2e-14246.41Lysine--tRNA ligase OS=Cricetulus griseus OX=10029 GN=KARS1 PE=1 SV=1[more]
Q99MN15.3e-14146.18Lysine--tRNA ligase OS=Mus musculus OX=10090 GN=Kars1 PE=1 SV=1[more]
BLAST of Cp4.1LG11g06370 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023546816.10.087.36lysine--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo][more]
XP_022997407.10.087.04lysine--tRNA ligase, cytoplasmic-like [Cucurbita maxima][more]
KAG6598875.10.086.88Lysine--tRNA ligase, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia... [more]
XP_022929668.10.086.88lysine--tRNA ligase, cytoplasmic-like [Cucurbita moschata][more]
XP_008451573.10.083.20PREDICTED: lysine--tRNA ligase, cytoplasmic [Cucumis melo][more]
BLAST of Cp4.1LG11g06370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K4Y50.087.04Lysine--tRNA ligase OS=Cucurbita maxima OX=3661 GN=LOC111492333 PE=3 SV=1[more]
A0A6J1ESV70.086.88Lysine--tRNA ligase OS=Cucurbita moschata OX=3662 GN=LOC111436183 PE=3 SV=1[more]
A0A1S3BR700.083.20Lysine--tRNA ligase OS=Cucumis melo OX=3656 GN=LOC103492812 PE=3 SV=1[more]
A0A5A7UI800.082.80Lysine--tRNA ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold222G... [more]
A0A0A0LHA80.082.08Lysine--tRNA ligase OS=Cucumis sativus OX=3659 GN=Csa_2G059840 PE=3 SV=1[more]
BLAST of Cp4.1LG11g06370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G11710.15.2e-21664.35lysyl-tRNA synthetase 1 [more]
AT3G13490.17.1e-5629.84Lysyl-tRNA synthetase, class II [more]
AT3G30805.17.4e-2186.79Class II aminoacyl-tRNA and biotin synthetases superfamily protein [more]
AT4G31180.15.2e-0629.91Class II aminoacyl-tRNA and biotin synthetases superfamily protein [more]
AT4G31180.25.2e-0629.91Class II aminoacyl-tRNA and biotin synthetases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..75
NoneNo IPR availableGENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 325..543
e-value: 3.1E-74
score: 252.3
NoneNo IPR availableGENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 256..324
e-value: 3.0E-20
score: 74.8
NoneNo IPR availableGENE3D2.40.50.140coord: 86..228
e-value: 6.2E-49
score: 167.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..83
NoneNo IPR availablePANTHERPTHR42918LYSYL-TRNA SYNTHETASEcoord: 321..543
coord: 5..320
NoneNo IPR availablePANTHERPTHR42918:SF14LYSINE--TRNA LIGASEcoord: 5..320
NoneNo IPR availablePANTHERPTHR42918:SF14LYSINE--TRNA LIGASEcoord: 321..543
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 261..532
IPR034762Bacterial/eukaryotic lysine-tRNA ligase, class IIPIRSFPIRSF039101LysRS2coord: 319..544
e-value: 3.1E-109
score: 363.9
coord: 21..322
e-value: 6.9E-92
score: 306.6
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)PFAMPF00152tRNA-synt_2coord: 334..531
e-value: 1.3E-34
score: 119.8
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)PFAMPF00152tRNA-synt_2coord: 261..320
e-value: 2.4E-11
score: 43.3
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 138..216
e-value: 1.5E-12
score: 47.3
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 279..533
score: 10.603651
IPR044136Lysine-tRNA ligase, class II, N-terminalCDDcd04322LysRS_Ncoord: 138..273
e-value: 3.31929E-42
score: 144.927
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 82..227

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g06370.1Cp4.1LG11g06370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006430 lysyl-tRNA aminoacylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0004824 lysine-tRNA ligase activity
molecular_function GO:0000049 tRNA binding
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding