Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAGTAGAGCGAAAGAAAGCTGTGGTTTGGGGAAGGAGAGGAAGATCACAGCTCCCAGTTCTGTCACCATTCCTAATGTTAATACTTCAACCAAGAGAACTCCAAAGTCATCTCCAAGAGGCATCTCCACTGATCAAAAGCTATCTTCCTTTCCTTCTTCACCATCATCATCATCTTCTTCTTCTACTCATTCTCTTTCAATCCTCCCTCAGAAACATGTTCCGAATTACCTCAAATCCACGGCCAGCTCCCGTCACGACCATAACTTTAAGCCGATCAAGAAGTCTGCAGGCCCTACACCGATACCCGAGGGCAAGCCTAGTTTGAATAGAAGAAGATCTTTTGACAAACCGCCCCCGGCTACGCAACGTTTGGGGAAGCCATTTCGATCGCCTGAACCGAGGAATAGGGCTGCTCATGCTCCGGTCCGGTCTTCCTCTTTTGGGGCCAAACCATCCACCACAATTGTCAGCTCTACAAAGACTGGTTTTTTGGAGAGATCAGGTTCCAAAATCTACAAGGTGGGAGGGAAAACACAACAATCAGTTCAAACATTGAAAAGTAGTAGTAATGTAAGGAAAAGCTTGAAGAGAGAATCTAGCAATGCTGCTTCTGCTTCATCAGCAGAAATGGTTCCCAAGACTAAGAATGCTGTTGAACATGTAGGTCAGAGTCCTGTTTTAGTTCTTGGTGCTAATGAGGAGGACTTAAAGAAGATCGAGTGCGAACTCGATCTATGTCTTCCGGATCCAAGGCCTGAATTAGATAAAGAACTTAGTACTACTGATCAGGTTGAAAAGAGGCTTCACCATCATCAGCCTATACAGGACACAAAGATCTTCAAAGTAGTTGGTTCTAATAAGAAAGTGGAAGAAACTCCAGGGGCAGCTGAGACTGATAATGCCAAATCGTCGATCCGGGAAGACGAAAATCGAGAACAAAATGAAGGGGAAGGAGAAGAAGAAGCTAAAGAAGAGGAGAAACCAGAGAGAATTGAAGTGGAAAAGGAGGAAGTTTTTGGTGTTGTTGCATCAGAGGAAAGCACAAACAACAAAAATGAAGAAGAGAAGAGCCACACCGATCCCATTCAGGTAGGAGTCATTGTTTTAGAACACAAAGAAGTAGAAGATGGGCAGAGTTCCAAGGAAGAAAATCACAACAGTACAGAGAAAGAGGCCGAAGCGACCGAGAAGGTGGCAGCCGCCGCCGCCGCCGCCGCAGCAGAGGCGGCAGCAGCCAAACCACGACAAGGAGGACCAGGGAGAAAGGAGTCTCCAGCAGTGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAGAAGAGGAAGAACAAGGTAAGGGCATTGGCAGGAGCATTTCAGACAGTCATTGACTATGAATCCTCGTCCAAATGA
mRNA sequence
ATGGCAACAAGTAGAGCGAAAGAAAGCTGTGGTTTGGGGAAGGAGAGGAAGATCACAGCTCCCAGTTCTGTCACCATTCCTAATGTTAATACTTCAACCAAGAGAACTCCAAAGTCATCTCCAAGAGGCATCTCCACTGATCAAAAGCTATCTTCCTTTCCTTCTTCACCATCATCATCATCTTCTTCTTCTACTCATTCTCTTTCAATCCTCCCTCAGAAACATGTTCCGAATTACCTCAAATCCACGGCCAGCTCCCGTCACGACCATAACTTTAAGCCGATCAAGAAGTCTGCAGGCCCTACACCGATACCCGAGGGCAAGCCTAGTTTGAATAGAAGAAGATCTTTTGACAAACCGCCCCCGGCTACGCAACGTTTGGGGAAGCCATTTCGATCGCCTGAACCGAGGAATAGGGCTGCTCATGCTCCGGTCCGGTCTTCCTCTTTTGGGGCCAAACCATCCACCACAATTGTCAGCTCTACAAAGACTGGTTTTTTGGAGAGATCAGGTTCCAAAATCTACAAGGTGGGAGGGAAAACACAACAATCAGTTCAAACATTGAAAAGTAGTAGTAATGTAAGGAAAAGCTTGAAGAGAGAATCTAGCAATGCTGCTTCTGCTTCATCAGCAGAAATGGTTCCCAAGACTAAGAATGCTGTTGAACATGTAGGTCAGAGTCCTGTTTTAGTTCTTGGTGCTAATGAGGAGGACTTAAAGAAGATCGAGTGCGAACTCGATCTATGTCTTCCGGATCCAAGGCCTGAATTAGATAAAGAACTTAGTACTACTGATCAGGTTGAAAAGAGGCTTCACCATCATCAGCCTATACAGGACACAAAGATCTTCAAAGTAGTTGGTTCTAATAAGAAAGTGGAAGAAACTCCAGGGGCAGCTGAGACTGATAATGCCAAATCGTCGATCCGGGAAGACGAAAATCGAGAACAAAATGAAGGGGAAGGAGAAGAAGAAGCTAAAGAAGAGGAGAAACCAGAGAGAATTGAAGTGGAAAAGGAGGAAGTTTTTGGTGTTGTTGCATCAGAGGAAAGCACAAACAACAAAAATGAAGAAGAGAAGAGCCACACCGATCCCATTCAGGTAGGAGTCATTGTTTTAGAACACAAAGAAGTAGAAGATGGGCAGAGTTCCAAGGAAGAAAATCACAACAGTACAGAGAAAGAGGCCGAAGCGACCGAGAAGGTGGCAGCCGCCGCCGCCGCCGCCGCAGCAGAGGCGGCAGCAGCCAAACCACGACAAGGAGGACCAGGGAGAAAGGAGTCTCCAGCAGTGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAGAAGAGGAAGAACAAGGTAAGGGCATTGGCAGGAGCATTTCAGACAGTCATTGACTATGAATCCTCGTCCAAATGA
Coding sequence (CDS)
ATGGCAACAAGTAGAGCGAAAGAAAGCTGTGGTTTGGGGAAGGAGAGGAAGATCACAGCTCCCAGTTCTGTCACCATTCCTAATGTTAATACTTCAACCAAGAGAACTCCAAAGTCATCTCCAAGAGGCATCTCCACTGATCAAAAGCTATCTTCCTTTCCTTCTTCACCATCATCATCATCTTCTTCTTCTACTCATTCTCTTTCAATCCTCCCTCAGAAACATGTTCCGAATTACCTCAAATCCACGGCCAGCTCCCGTCACGACCATAACTTTAAGCCGATCAAGAAGTCTGCAGGCCCTACACCGATACCCGAGGGCAAGCCTAGTTTGAATAGAAGAAGATCTTTTGACAAACCGCCCCCGGCTACGCAACGTTTGGGGAAGCCATTTCGATCGCCTGAACCGAGGAATAGGGCTGCTCATGCTCCGGTCCGGTCTTCCTCTTTTGGGGCCAAACCATCCACCACAATTGTCAGCTCTACAAAGACTGGTTTTTTGGAGAGATCAGGTTCCAAAATCTACAAGGTGGGAGGGAAAACACAACAATCAGTTCAAACATTGAAAAGTAGTAGTAATGTAAGGAAAAGCTTGAAGAGAGAATCTAGCAATGCTGCTTCTGCTTCATCAGCAGAAATGGTTCCCAAGACTAAGAATGCTGTTGAACATGTAGGTCAGAGTCCTGTTTTAGTTCTTGGTGCTAATGAGGAGGACTTAAAGAAGATCGAGTGCGAACTCGATCTATGTCTTCCGGATCCAAGGCCTGAATTAGATAAAGAACTTAGTACTACTGATCAGGTTGAAAAGAGGCTTCACCATCATCAGCCTATACAGGACACAAAGATCTTCAAAGTAGTTGGTTCTAATAAGAAAGTGGAAGAAACTCCAGGGGCAGCTGAGACTGATAATGCCAAATCGTCGATCCGGGAAGACGAAAATCGAGAACAAAATGAAGGGGAAGGAGAAGAAGAAGCTAAAGAAGAGGAGAAACCAGAGAGAATTGAAGTGGAAAAGGAGGAAGTTTTTGGTGTTGTTGCATCAGAGGAAAGCACAAACAACAAAAATGAAGAAGAGAAGAGCCACACCGATCCCATTCAGGTAGGAGTCATTGTTTTAGAACACAAAGAAGTAGAAGATGGGCAGAGTTCCAAGGAAGAAAATCACAACAGTACAGAGAAAGAGGCCGAAGCGACCGAGAAGGTGGCAGCCGCCGCCGCCGCCGCCGCAGCAGAGGCGGCAGCAGCCAAACCACGACAAGGAGGACCAGGGAGAAAGGAGTCTCCAGCAGTGTACAATCATGTAATAGAGGAGACAGCAAGTAAGCTTTTGGAGAAGAGGAAGAACAAGGTAAGGGCATTGGCAGGAGCATTTCAGACAGTCATTGACTATGAATCCTCGTCCAAATGA
Protein sequence
MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSSSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGKTQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAETDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKSHTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Homology
BLAST of Cp4.1LG11g05510 vs. NCBI nr
Match:
XP_023546370.1 (cell wall protein RBR3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 854 bits (2207), Expect = 2.67e-311
Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK
Sbjct: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS
Sbjct: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG
Sbjct: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
BLAST of Cp4.1LG11g05510 vs. NCBI nr
Match:
KAG6598809.1 (hypothetical protein SDJN03_08587, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 838 bits (2164), Expect = 9.16e-305
Identity = 460/468 (98.29%), Postives = 463/468 (98.93%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKITAPSSVTIPN+NTSTKRTPKSSPRGISTDQKLSSFPSSPSSS
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS GP PIPEGKPSLNRRRSFDKP
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSGGPAPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST+IVSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQ+PVLVLGANEEDLK
Sbjct: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQTPVLVLGANEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS
Sbjct: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HTDPIQ GVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAA AAA EAAAAKPRQG
Sbjct: 361 HTDPIQEGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAATAAA-EAAAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Cp4.1LG11g05510 vs. NCBI nr
Match:
KAG7029749.1 (hypothetical protein SDJN02_08091, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 832 bits (2150), Expect = 1.24e-302
Identity = 457/468 (97.65%), Postives = 461/468 (98.50%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKITAPSSVTIPN+NTSTKRTPKSSPRGISTDQKLSSFPSSPSSS
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS GP PIPEGKPSLNRRRSFDKP
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSGGPAPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST+IVSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQ+PVLVLGANEEDLK
Sbjct: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQTPVLVLGANEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSI+EDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEES NNKNEEEKS
Sbjct: 301 TDNAKSSIQEDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESRNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HTDPIQ GVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAA A A EAAAAKPRQG
Sbjct: 361 HTDPIQEGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAATATA-EAAAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Cp4.1LG11g05510 vs. NCBI nr
Match:
XP_022962060.1 (neurofilament medium polypeptide-like [Cucurbita moschata])
HSP 1 Score: 826 bits (2133), Expect = 4.84e-300
Identity = 454/468 (97.01%), Postives = 458/468 (97.86%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKITAPSSVTIPN+NTSTKRTPKSSPRGISTDQKLSSFPSSPSSS
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS GP PIPEGKPSLNRRRSFDKP
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSGGPAPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST+IVSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK
Sbjct: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQ+TKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQETKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS
Sbjct: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HT PIQ GVIVLEHKE EDGQSSKEENH STEKE EATEKVAAAA +AA EA AAKPRQG
Sbjct: 361 HTVPIQEGVIVLEHKEAEDGQSSKEENHTSTEKETEATEKVAAAATSAA-EAVAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Cp4.1LG11g05510 vs. NCBI nr
Match:
XP_022997522.1 (microtubule-associated protein RP/EB family member 1-like [Cucurbita maxima])
HSP 1 Score: 813 bits (2101), Expect = 3.24e-295
Identity = 449/468 (95.94%), Postives = 453/468 (96.79%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKIT PSSVTIPN NTSTKRTPKSSPRGISTDQKLSSFPSSPS S
Sbjct: 1 MATSRAKESCGLGKERKITTPSSVTIPNPNTSTKRTPKSSPRGISTDQKLSSFPSSPSPS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSS THSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGP PIPEGKPSLNRRRSFDKP
Sbjct: 61 SSS-THSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPAPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPA QRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTT+VSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPAMQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTLVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQT KSSSN+RKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLG NEEDLK
Sbjct: 181 TQQSVQTFKSSSNLRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGVNEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSI EDEN+EQNEGEGEEEAKEEEKPERIEVEKEEV+GVVASEESTNNKNEEEKS
Sbjct: 301 TDNAKSSIWEDENQEQNEGEGEEEAKEEEKPERIEVEKEEVYGVVASEESTNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HTDPIQ GVIVLEHKE EDGQSSKEENHNSTEKEAEATEKVAAAAAAA A AAKPRQG
Sbjct: 361 HTDPIQEGVIVLEHKEAEDGQSSKEENHNSTEKEAEATEKVAAAAAAA---AEAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 464
BLAST of Cp4.1LG11g05510 vs. ExPASy TrEMBL
Match:
A0A6J1HE16 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462632 PE=4 SV=1)
HSP 1 Score: 826 bits (2133), Expect = 2.34e-300
Identity = 454/468 (97.01%), Postives = 458/468 (97.86%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKITAPSSVTIPN+NTSTKRTPKSSPRGISTDQKLSSFPSSPSSS
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS GP PIPEGKPSLNRRRSFDKP
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSGGPAPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST+IVSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK
Sbjct: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQ+TKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQETKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS
Sbjct: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HT PIQ GVIVLEHKE EDGQSSKEENH STEKE EATEKVAAAA +AA EA AAKPRQG
Sbjct: 361 HTVPIQEGVIVLEHKEAEDGQSSKEENHTSTEKETEATEKVAAAATSAA-EAVAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Cp4.1LG11g05510 vs. ExPASy TrEMBL
Match:
A0A6J1K599 (microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492415 PE=4 SV=1)
HSP 1 Score: 813 bits (2101), Expect = 1.57e-295
Identity = 449/468 (95.94%), Postives = 453/468 (96.79%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
MATSRAKESCGLGKERKIT PSSVTIPN NTSTKRTPKSSPRGISTDQKLSSFPSSPS S
Sbjct: 1 MATSRAKESCGLGKERKITTPSSVTIPNPNTSTKRTPKSSPRGISTDQKLSSFPSSPSPS 60
Query: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPTPIPEGKPSLNRRRSFDKP 120
SSS THSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGP PIPEGKPSLNRRRSFDKP
Sbjct: 61 SSS-THSLSILPQKHVPNYLKSTASSRHDHNFKPIKKSAGPAPIPEGKPSLNRRRSFDKP 120
Query: 121 PPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGK 180
PPA QRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTT+VSSTKTGFLERSGSKIYKVGGK
Sbjct: 121 PPAMQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTLVSSTKTGFLERSGSKIYKVGGK 180
Query: 181 TQQSVQTLKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLK 240
TQQSVQT KSSSN+RKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLG NEEDLK
Sbjct: 181 TQQSVQTFKSSSNLRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGVNEEDLK 240
Query: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE
Sbjct: 241 KIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAE 300
Query: 301 TDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKS 360
TDNAKSSI EDEN+EQNEGEGEEEAKEEEKPERIEVEKEEV+GVVASEESTNNKNEEEKS
Sbjct: 301 TDNAKSSIWEDENQEQNEGEGEEEAKEEEKPERIEVEKEEVYGVVASEESTNNKNEEEKS 360
Query: 361 HTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQG 420
HTDPIQ GVIVLEHKE EDGQSSKEENHNSTEKEAEATEKVAAAAAAA A AAKPRQG
Sbjct: 361 HTDPIQEGVIVLEHKEAEDGQSSKEENHNSTEKEAEATEKVAAAAAAA---AEAAKPRQG 420
Query: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 421 GPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 464
BLAST of Cp4.1LG11g05510 vs. ExPASy TrEMBL
Match:
A0A0A0LS85 (CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000 PE=4 SV=1)
HSP 1 Score: 507 bits (1306), Expect = 1.14e-174
Identity = 326/491 (66.40%), Postives = 368/491 (74.95%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGI--STDQKLSSF-PSSP 60
MAT+R+KESCGLGKERKIT PSSVTIP+ NTSTKRTPKSSPRGI STD K SF PSS
Sbjct: 1 MATTRSKESCGLGKERKITPPSSVTIPS-NTSTKRTPKSSPRGIISSTDPKFPSFSPSSA 60
Query: 61 SSSSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS-AGPTPIPEGKPSLNRRRS 120
SS SS+ SLSILP+KHVPNYLKSTASSR+DHNFKPI +S +GP PIPEG+PSLNRRRS
Sbjct: 61 PSSPSSAPSSLSILPEKHVPNYLKSTASSRNDHNFKPIARSKSGPAPIPEGRPSLNRRRS 120
Query: 121 FDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVS---STKTGFLERSGSK 180
FDKPPP RLGKPFRSP PRNR H PVRSSSFGAKPSTT + STK GFLERS SK
Sbjct: 121 FDKPPPTVPRLGKPFRSPGPRNRTPHVPVRSSSFGAKPSTTTTTIGHSTKPGFLERSSSK 180
Query: 181 IYKVGGKTQQSVQTLKSSSN-VRKSLKRESSNAASASSA------------EMVPKTKNA 240
KVGGK Q +Q+LK+SS+ V+KSL+RESSNAA+++SA E+VPK+KNA
Sbjct: 181 SSKVGGKPQPPIQSLKTSSSYVKKSLRRESSNAAASASASASASASASASAEIVPKSKNA 240
Query: 241 VEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDT 300
VEHV QSP VLG NEEDLKKIECELD LPDP PELDK++ DQVEK+ + DT
Sbjct: 241 VEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQIRL-DQVEKKAVLDKDETDT 300
Query: 301 KIFKVVGSNKKVEE---TPGAAETDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVE 360
+I KVV +NK+VEE TP ET+ + + N+EQNE EGEE KEE+ P+RIEVE
Sbjct: 301 EILKVVVTNKEVEEQKETPRTVETEISLA------NQEQNEREGEE-PKEEDNPKRIEVE 360
Query: 361 KEEVFGVVASEESTNNKNEEEKSHTDPIQVGVIVLEHKEVEDGQSSKEENHNSTEKEAEA 420
KEEV VA EES NNKN++EKS TD + G E E Q+S + +TEKEAE+
Sbjct: 361 KEEV---VALEESINNKNDQEKSETDSVLDGESCKE----ESDQNSTPKAAETTEKEAES 420
Query: 421 TEKVAAAAAAAAAEAAAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAF 468
TEK A KPRQGGPGRKESPA+YNHVIEETASKLLEKRKNKVRALAGAF
Sbjct: 421 TEKTA-------------KPRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAF 462
BLAST of Cp4.1LG11g05510 vs. ExPASy TrEMBL
Match:
A0A1S3BBU4 (serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488229 PE=4 SV=1)
HSP 1 Score: 506 bits (1304), Expect = 1.56e-174
Identity = 335/482 (69.50%), Postives = 368/482 (76.35%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGI--STDQKLSSFPSSPS 60
MAT+R+KES GLGKER+IT PSSVTIPN NT TKRTPKSSPRG STD K+ SF SS
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPN-NTPTKRTPKSSPRGFISSTDPKVPSFSSSSP 60
Query: 61 SSSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS-AGPTPIPEGKPSLNRRRSF 120
S SS+ T SLSILP+K VPNYLKSTASSR+DHNFKPI +S +GP PIPEGKPSLNRRRSF
Sbjct: 61 SPSSAPT-SLSILPEKPVPNYLKSTASSRNDHNFKPITRSKSGPAPIPEGKPSLNRRRSF 120
Query: 121 DKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST--TIVS-STKTGFLERSGSKI 180
DKPPP RL KPFRSP PRNRA H PVRSSSFGAKPST TI+ STK GFLERS SKI
Sbjct: 121 DKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTTIIGHSTKPGFLERSSSKI 180
Query: 181 YKVGGKTQQSVQTLK-SSSNVRKSLKRESSN-AASAS---SAEMVPKTKNAVEHVGQSPV 240
KVGGK Q +Q+LK SSS+V+KSL+RESSN AASAS SAE+VPKTKNAVEHV QSP
Sbjct: 181 SKVGGKPQPPIQSLKTSSSHVKKSLRRESSNVAASASASASAEIVPKTKNAVEHVDQSPS 240
Query: 241 LVLGANEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVGSN 300
VLG NEEDLKKIECELD LPDP PELDK++ DQVEK+ + DT+I KVV +N
Sbjct: 241 FVLGVNEEDLKKIECELDPYLPDPMPELDKQVRI-DQVEKKAALDKDETDTEILKVVVTN 300
Query: 301 KKVEE--TPGAAETDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVVAS 360
K+VEE TPG AET+ + + NREQNEGE EEE KEE+KP+RI VEKEEV A
Sbjct: 301 KEVEEKETPGTAETEISLA------NREQNEGE-EEEPKEEDKPKRIGVEKEEVL---AL 360
Query: 361 EESTNNKNEEEKSHTDPIQVGVIVLEHKEVEDGQSSKEEN-HNSTEKEAEATEKVAAAAA 420
EES NNKN++EKS TD + DG+S KEEN NST K AE TEK A +
Sbjct: 361 EESINNKNDQEKSETDSVL------------DGESCKEENDQNSTPKAAETTEKEAESTE 420
Query: 421 AAAAEAAAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESS 468
AKPRQG PGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESS
Sbjct: 421 KT------AKPRQGAPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESS 451
BLAST of Cp4.1LG11g05510 vs. ExPASy TrEMBL
Match:
A0A5A7VBK4 (Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003220 PE=4 SV=1)
HSP 1 Score: 506 bits (1302), Expect = 3.36e-174
Identity = 335/484 (69.21%), Postives = 368/484 (76.03%), Query Frame = 0
Query: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGI--STDQKLSSFPSSPS 60
MAT+R+KES GLGKER+IT PSSVTIPN NT TKRTPKSSPRG STD K+ SF SS
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPN-NTPTKRTPKSSPRGFISSTDPKVPSFSSSSP 60
Query: 61 SSSSSSTHSLSILPQKHVPNYLKSTASSRHDHNFKPIKKS-AGPTPIPEGKPSLNRRRSF 120
S SS+ T SLSILP+K VPNYLKSTASSR+DHNFKPI +S +GP PIPEGKPSLNRRRSF
Sbjct: 61 SPSSAPT-SLSILPEKPVPNYLKSTASSRNDHNFKPITRSKSGPAPIPEGKPSLNRRRSF 120
Query: 121 DKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPST--TIVS-STKTGFLERSGSKI 180
DKPPP RL KPFRSP PRNRA H PVRSSSFGAKPST TI+ STK GFLERS SKI
Sbjct: 121 DKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTTIIGHSTKPGFLERSSSKI 180
Query: 181 YKVGGKTQQSVQTLK-SSSNVRKSLKRESSN-AASAS-----SAEMVPKTKNAVEHVGQS 240
KVGGK Q +Q+LK SSS+V+KSL+RESSN AASAS SAE+VPKTKNAVEHV QS
Sbjct: 181 SKVGGKPQPPIQSLKTSSSHVKKSLRRESSNVAASASASASASAEIVPKTKNAVEHVDQS 240
Query: 241 PVLVLGANEEDLKKIECELDLCLPDPRPELDKELSTTDQVEKRLHHHQPIQDTKIFKVVG 300
P VLG NEEDLKKIECELD LPDP PELDK++ DQVEK+ + DT+I KVV
Sbjct: 241 PSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRI-DQVEKKAALDKDETDTEILKVVV 300
Query: 301 SNKKVEE--TPGAAETDNAKSSIREDENREQNEGEGEEEAKEEEKPERIEVEKEEVFGVV 360
+NK+VEE TPG AET+ + + NREQNEGE EEE KEE+KP+RI VEKEEV
Sbjct: 301 TNKEVEEKETPGTAETEISLA------NREQNEGE-EEEPKEEDKPKRIGVEKEEVL--- 360
Query: 361 ASEESTNNKNEEEKSHTDPIQVGVIVLEHKEVEDGQSSKEEN-HNSTEKEAEATEKVAAA 420
A EES NNKN++EKS TD + DG+S KEEN NST K AE TEK A +
Sbjct: 361 ALEESINNKNDQEKSETDSVL------------DGESCKEENDQNSTPKAAETTEKEAES 420
Query: 421 AAAAAAEAAAAKPRQGGPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYE 468
AKPRQG PGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYE
Sbjct: 421 TEKT------AKPRQGAPGRKESPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYE 453
BLAST of Cp4.1LG11g05510 vs. TAIR 10
Match:
AT5G24880.1 (BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 85.5 bits (210), Expect = 1.2e-16
Identity = 146/463 (31.53%), Postives = 212/463 (45.79%), Query Frame = 0
Query: 32 STKRTPKSSP--RGISTDQKLSSFPSSPSSSSSSSTHSLSILPQKHVPNYLKSTASSRHD 91
+T T K+ P + +S + L P P S++SS S P+K +PNYLK T SSR D
Sbjct: 3 TTSSTTKAKPDNQNLSRTKSLGRKPKQPLSTASSEDGSSDQKPEKPLPNYLKPTISSRPD 62
Query: 92 HNFKPIKKSAGPTPIPEGKPSLNRRRSFDKPPPATQRLGKPFRSPEPRNRAA--HAPVRS 151
K +KK+ + L RRRSFD+PP + L P S PR + + +P RS
Sbjct: 63 AG-KLLKKNNNSL---DDNQKLLRRRSFDRPPSS---LTSPSTSASPRIQKSLNVSPSRS 122
Query: 152 SSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGKTQQSVQT------LKSSSNVRKSLKRE 211
A P V++ ++ GS+ GG T +S L SSS KS K
Sbjct: 123 RDRPAVPREKPVTALRSSSFH--GSRNVPKGGNTAKSPPVAPKKSGLNSSSTSSKSKKEG 182
Query: 212 SSNA----ASASSAEMVPKTKNAVEHVGQSPVLVLGANEEDLKKIECELDLCLPDPRPEL 271
S N AS + + ++ + Q +L + ++ + + E + +
Sbjct: 183 SENVRIKKASDKEIALDSASMSSAQEDHQEEILKVESDHLQVSDHDIEEPKYEKEEKEVQ 242
Query: 272 DKELSTTDQVEKRLHHHQPIQDTKIFKVVGSN-----KKVEETPGAAETD--NAKSSIRE 331
+K + + VE++ P T + VG + ++EE E D ++E
Sbjct: 243 EKVVQANESVEEKAESSGP---TPVASPVGKDCNAVVAELEEKLIKNEDDIEEKTEEMKE 302
Query: 332 DENREQNEGEGEEEAK----EEEKPERIEVEKEEVFGVVASEESTNNKNEEEKSHTDPIQ 391
+N + N+ E EE+ K E E PE+++ E +EV V EE+T K EE K
Sbjct: 303 QDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESV---EETTQEKEEEVKEEGKERV 362
Query: 392 VGVIVLEHKEVEDGQSSK-EENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQGGPGRK 451
+ K ED Q K EE K E EKV E+A K ++ G+K
Sbjct: 363 EEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKV------KEEESAEGKKKEVVKGKK 422
Query: 452 ESPAVYNHVIEETASKLLEK-RKNKVRALAGAFQTVIDYESSS 468
ESP+ YN VI ASK+ E RKNKV ALAGAFQTVIDYE+++
Sbjct: 423 ESPSAYNDVI---ASKMQENPRKNKVLALAGAFQTVIDYETAA 441
BLAST of Cp4.1LG11g05510 vs. TAIR 10
Match:
AT5G10660.1 (calmodulin-binding protein-related )
HSP 1 Score: 60.5 bits (145), Expect = 4.3e-09
Identity = 139/449 (30.96%), Postives = 197/449 (43.88%), Query Frame = 0
Query: 31 TSTKRTPKSSPRGISTDQKLSSFPSSPSSSSSSSTHSLSILPQKHVPNYLKSTASSRHDH 90
T TKR K+ R S +K SS +++ + +I K +PNYLK T SSR D
Sbjct: 8 TKTKRDNKNLTRSKSLGRKPKPVSSSEPEANADGSDRKTI--GKPLPNYLKPTISSRPD- 67
Query: 91 NFKPIKKSAGPTPIPEGKPSLNRRRSFDKPP-----PATQRLGKPFRS--PEPRNRAAHA 150
P+K + E + L RRRSFD PP P+T + + P R A
Sbjct: 68 ---PVKFLRKNNAVEENQ-KLLRRRSFDHPPSSLTSPSTSSAHRSLNTSPAHPHLRDKPA 127
Query: 151 PVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYKVGGKTQQSVQTLKSSSNVRKS-LKRES 210
R ST+ S++ G S K V + SS V+KS L S
Sbjct: 128 VPREKPVTGLRSTSFHGSSRGGLRGSSTVKSPPVAS---------RGSSGVKKSGLSGNS 187
Query: 211 SNAASASSAEMVPKTKNAVE-HVGQSPVLVLGANEEDLKKIECELDLCLPDPRP-ELDKE 270
S+ + + VPK + E SP+ +EE++ K+E ++ + P E DK+
Sbjct: 188 SSKSKKEGSGNVPKKSSGKEISPDSSPLASAHEDEEEIVKVETDVHISDHGEEPKEEDKD 247
Query: 271 LSTTDQVEKRLHHHQPIQDTKIFKVVGSNKKVEETPGAAETDNAKSS-IREDENREQNEG 330
QP + S ++ E +P AA T+ K I ED++ EQ E
Sbjct: 248 -----------QFAQPDE---------SGEEKETSPVAASTEEQKGELIDEDKSTEQIEE 307
Query: 331 EGEEEAKEEEKPERIEVEKEEVFGVVASEESTNNKNEEEKSHTDPIQVGVIVLEHKEVED 390
E E EE E E+EEV ++S + +N E + T + V V E KE E
Sbjct: 308 PKEPENIEENNSE----EEEEV-----KKKSDDEENSETVATTTDMNEAVNVEESKEEEK 367
Query: 391 GQSSKEENHNSTEKEAEATEKVAAAAAAAAAEAAAAKPRQGGPGRKESPAVYNHVIEETA 450
++ +E + E T + A E + Q G+KESP YN VI A
Sbjct: 368 EEAEVKEEEGESSAAKEETTETMAQVEELPEEGTKNEVVQ---GKKESPTAYNDVI---A 405
Query: 451 SKLLE-KRKNKVRALAGAFQTVIDYESSS 468
SK+ E +KNKV ALAGAFQTVIDYE+++
Sbjct: 428 SKMQENSKKNKVLALAGAFQTVIDYETAA 405
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023546370.1 | 2.67e-311 | 100.00 | cell wall protein RBR3-like [Cucurbita pepo subsp. pepo] | [more] |
KAG6598809.1 | 9.16e-305 | 98.29 | hypothetical protein SDJN03_08587, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7029749.1 | 1.24e-302 | 97.65 | hypothetical protein SDJN02_08091, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022962060.1 | 4.84e-300 | 97.01 | neurofilament medium polypeptide-like [Cucurbita moschata] | [more] |
XP_022997522.1 | 3.24e-295 | 95.94 | microtubule-associated protein RP/EB family member 1-like [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HE16 | 2.34e-300 | 97.01 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462... | [more] |
A0A6J1K599 | 1.57e-295 | 95.94 | microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX... | [more] |
A0A0A0LS85 | 1.14e-174 | 66.40 | CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000... | [more] |
A0A1S3BBU4 | 1.56e-174 | 69.50 | serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488... | [more] |
A0A5A7VBK4 | 3.36e-174 | 69.21 | Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT5G24880.1 | 1.2e-16 | 31.53 | BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (... | [more] |
AT5G10660.1 | 4.3e-09 | 30.96 | calmodulin-binding protein-related | [more] |